![[ChimeraX Issue Tracking System]](/trac/ChimeraX/chrome/site/ChimeraX-icon.svg){kind=icon}
Opened 4 years ago
Closed 4 years ago
#4990 closed defect (can't reproduce)
Crash in garbage collection during new-object allocation
| Reported by: | Owned by: | pett | |
|---|---|---|---|
| Priority: | normal | Milestone: | |
| Component: | Core | Version: | |
| Keywords: | Cc: | Tom Goddard | |
| Blocked By: | Blocking: | ||
| Notify when closed: | Platform: | all | |
| Project: | ChimeraX |
Description
The following bug report has been submitted:
Platform: Darwin-19.6.0-x86_64-i386-64bit
ChimeraX Version: 1.1.1 (2020-10-07 08:32:49 UTC)
Description
Last time you used ChimeraX it crashed.
Please describe steps that led to the crash here.
Process: ChimeraX [4304]
Path: /Applications/ChimeraX-1.1.1.app/Contents/MacOS/ChimeraX
Identifier: edu.ucsf.cgl.ChimeraX
Version: 1.1.1 (1.1.1.0)
Code Type: X86-64 (Native)
Parent Process: ??? [1]
Responsible: ChimeraX [4304]
User ID: 501
Date/Time: 2021-08-02 15:51:40.365 +0800
OS Version: Mac OS X 10.15.7 (19H2)
Report Version: 12
Bridge OS Version: 5.4 (18P4663)
Anonymous UUID: FAE570D1-83C0-130F-7B31-2326926A6957
Sleep/Wake UUID: 08286424-5517-4FD1-BFC1-426DD84CDC8F
Time Awake Since Boot: 47000 seconds
Time Since Wake: 2400 seconds
System Integrity Protection: enabled
Crashed Thread: 0 CrBrowserMain Dispatch queue: com.apple.main-thread
Exception Type: EXC_BAD_ACCESS (SIGSEGV)
Exception Codes: KERN_INVALID_ADDRESS at 0x00000000000000a9
Exception Note: EXC_CORPSE_NOTIFY
VM Regions Near 0xa9:
-->
__TEXT 0000000102142000-0000000102143000 [ 4K] r-x/r-x SM=COW /Applications/ChimeraX-1.1.1.app/Contents/MacOS/ChimeraX
Thread 0 Crashed:: CrBrowserMain Dispatch queue: com.apple.main-thread
0 libsystem_kernel.dylib 0x00007fff68ae533a __pthread_kill + 10
1 libsystem_pthread.dylib 0x00007fff68ba1e60 pthread_kill + 430
2 libsystem_c.dylib 0x00007fff689fc93e raise + 26
3 libsystem_platform.dylib 0x00007fff68b965fd _sigtramp + 29
4 ??? 000000000000000000 0 + 0
5 org.python.python 0x00000001021be980 tupletraverse + 64
6 org.python.python 0x00000001022a49a3 collect + 2083
7 org.python.python 0x00000001022a514e _PyObject_GC_Alloc + 286
8 org.python.python 0x00000001022a5224 _PyObject_GC_New + 20
9 org.python.python 0x00000001021a474b new_dict_with_shared_keys + 171
10 org.python.python 0x00000001021a4962 _PyObjectDict_SetItem + 450
11 org.python.python 0x00000001021b1581 _PyObject_GenericSetAttrWithDict + 369
12 org.python.python 0x00000001021b093c PyObject_SetAttr + 108
13 org.python.python 0x0000000102242625 _PyEval_EvalFrameDefault + 13781
14 org.python.python 0x0000000102249a2c _PyEval_EvalCodeWithName + 3276
15 org.python.python 0x0000000102173377 _PyFunction_FastCallDict + 455
16 org.python.python 0x0000000102174873 _PyObject_Call_Prepend + 131
17 org.python.python 0x00000001021c7e3f slot_tp_init + 175
18 org.python.python 0x00000001021c3534 type_call + 292
19 org.python.python 0x0000000102173112 _PyObject_FastCallDict + 354
20 org.python.python 0x0000000102174a90 _PyObject_CallFunctionVa + 272
21 org.python.python 0x000000010217515a _PyObject_CallMethod_SizeT + 202
22 _multiarray_umath.cpython-37m-darwin.so 0x0000000103355325 array_ctypes_get + 69
23 org.python.python 0x00000001021b0ebb _PyObject_GenericGetAttrWithDict + 171
24 org.python.python 0x0000000102243bee _PyEval_EvalFrameDefault + 19358
25 org.python.python 0x0000000102173d61 function_code_fastcall + 177
26 org.python.python 0x0000000102248bd4 call_function + 772
27 org.python.python 0x00000001022458ae _PyEval_EvalFrameDefault + 26718
28 org.python.python 0x0000000102173d61 function_code_fastcall + 177
29 org.python.python 0x0000000102248bd4 call_function + 772
30 org.python.python 0x00000001022458ae _PyEval_EvalFrameDefault + 26718
31 org.python.python 0x0000000102173d61 function_code_fastcall + 177
32 org.python.python 0x0000000102248bd4 call_function + 772
33 org.python.python 0x0000000102245817 _PyEval_EvalFrameDefault + 26567
34 org.python.python 0x0000000102249a2c _PyEval_EvalCodeWithName + 3276
35 org.python.python 0x0000000102173377 _PyFunction_FastCallDict + 455
36 org.python.python 0x0000000102174873 _PyObject_Call_Prepend + 131
37 org.python.python 0x00000001021c7e3f slot_tp_init + 175
38 org.python.python 0x00000001021c3534 type_call + 292
39 org.python.python 0x00000001021736df _PyObject_FastCallKeywords + 575
40 org.python.python 0x0000000102248bcd call_function + 765
41 org.python.python 0x00000001022458ae _PyEval_EvalFrameDefault + 26718
42 org.python.python 0x0000000102249a2c _PyEval_EvalCodeWithName + 3276
43 org.python.python 0x0000000102173879 _PyFunction_FastCallKeywords + 217
44 org.python.python 0x0000000102248bd4 call_function + 772
45 org.python.python 0x00000001022458ae _PyEval_EvalFrameDefault + 26718
46 org.python.python 0x0000000102249a2c _PyEval_EvalCodeWithName + 3276
47 org.python.python 0x0000000102173377 _PyFunction_FastCallDict + 455
48 org.python.python 0x000000010217bca0 property_descr_get + 160
49 org.python.python 0x00000001021b0ebb _PyObject_GenericGetAttrWithDict + 171
50 org.python.python 0x0000000102243bee _PyEval_EvalFrameDefault + 19358
51 org.python.python 0x0000000102173d61 function_code_fastcall + 177
52 org.python.python 0x0000000102248bd4 call_function + 772
53 org.python.python 0x00000001022458ae _PyEval_EvalFrameDefault + 26718
54 org.python.python 0x0000000102249a2c _PyEval_EvalCodeWithName + 3276
55 org.python.python 0x0000000102173879 _PyFunction_FastCallKeywords + 217
56 org.python.python 0x0000000102248bd4 call_function + 772
57 org.python.python 0x0000000102245817 _PyEval_EvalFrameDefault + 26567
58 org.python.python 0x0000000102173d61 function_code_fastcall + 177
59 org.python.python 0x0000000102248bd4 call_function + 772
60 org.python.python 0x00000001022457fa _PyEval_EvalFrameDefault + 26538
61 org.python.python 0x0000000102173d61 function_code_fastcall + 177
62 org.python.python 0x0000000102248bd4 call_function + 772
63 org.python.python 0x00000001022457fa _PyEval_EvalFrameDefault + 26538
64 org.python.python 0x0000000102173d61 function_code_fastcall + 177
65 org.python.python 0x0000000102248bd4 call_function + 772
66 org.python.python 0x00000001022457fa _PyEval_EvalFrameDefault + 26538
67 org.python.python 0x0000000102249a2c _PyEval_EvalCodeWithName + 3276
68 org.python.python 0x0000000102173879 _PyFunction_FastCallKeywords + 217
69 org.python.python 0x0000000102248bd4 call_function + 772
70 org.python.python 0x00000001022457fa _PyEval_EvalFrameDefault + 26538
71 org.python.python 0x00000001021828b8 gen_send_ex + 248
72 org.python.python 0x000000010223d1a4 builtin_next + 100
73 org.python.python 0x000000010217452d _PyMethodDef_RawFastCallKeywords + 653
74 org.python.python 0x00000001021738b9 _PyCFunction_FastCallKeywords + 41
75 org.python.python 0x0000000102248b60 call_function + 656
76 org.python.python 0x00000001022458ae _PyEval_EvalFrameDefault + 26718
77 org.python.python 0x0000000102173d61 function_code_fastcall + 177
78 org.python.python 0x0000000102174873 _PyObject_Call_Prepend + 131
79 org.python.python 0x0000000102173112 _PyObject_FastCallDict + 354
80 org.python.python 0x0000000102245533 _PyEval_EvalFrameDefault + 25827
81 org.python.python 0x0000000102249a2c _PyEval_EvalCodeWithName + 3276
82 org.python.python 0x0000000102173879 _PyFunction_FastCallKeywords + 217
83 org.python.python 0x0000000102248bd4 call_function + 772
84 org.python.python 0x000000010223f5c4 _PyEval_EvalFrameDefault + 1396
85 org.python.python 0x0000000102249a2c _PyEval_EvalCodeWithName + 3276
86 org.python.python 0x0000000102173879 _PyFunction_FastCallKeywords + 217
87 org.python.python 0x0000000102248bd4 call_function + 772
88 org.python.python 0x00000001022458ae _PyEval_EvalFrameDefault + 26718
89 org.python.python 0x0000000102249a2c _PyEval_EvalCodeWithName + 3276
90 org.python.python 0x0000000102173377 _PyFunction_FastCallDict + 455
91 QtCore.so 0x0000000111f91f17 PyQtSlot::call(_object*, _object*) const + 39
92 QtCore.so 0x0000000111f91e26 PyQtSlot::invoke(void**, _object*, void*, bool) const + 374
93 QtCore.so 0x0000000111f92925 PyQtSlotProxy::unislot(void**) + 85
94 QtCore.so 0x0000000111f9289a PyQtSlotProxy::qt_metacall(QMetaObject::Call, int, void**) + 58
95 QtCore 0x000000010fed813d QMetaObject::activate(QObject*, int, int, void**) + 1773
96 QtWidgets 0x000000010f3b2ee1 0x10f1ab000 + 2129633
97 QtCore 0x000000010fed868c QMetaObject::activate(QObject*, int, int, void**) + 3132
98 QtGui 0x000000010faeb5f4 QPlatformColorDialogHelper::currentColorChanged(QColor const&) + 52
99 libqcocoa.dylib 0x0000000119ce33cd 0x119c78000 + 439245
100 com.apple.CoreFoundation 0x00007fff2e8de80f __CFNOTIFICATIONCENTER_IS_CALLING_OUT_TO_AN_OBSERVER__ + 12
101 com.apple.CoreFoundation 0x00007fff2e8de7a3 ___CFXRegistrationPost1_block_invoke + 63
102 com.apple.CoreFoundation 0x00007fff2e8de718 _CFXRegistrationPost1 + 372
103 com.apple.CoreFoundation 0x00007fff2e8de384 ___CFXNotificationPost_block_invoke + 80
104 com.apple.CoreFoundation 0x00007fff2e8ae4fd -[_CFXNotificationRegistrar find:object:observer:enumerator:] + 1554
105 com.apple.CoreFoundation 0x00007fff2e8ad9a9 _CFXNotificationPost + 1351
106 com.apple.Foundation 0x00007fff30f2b786 -[NSNotificationCenter postNotificationName:object:userInfo:] + 59
107 com.apple.AppKit 0x00007fff2c07df46 -[NSColorPanel _withColorSettingDisabled:] + 37
108 com.apple.AppKit 0x00007fff2c07e06e -[NSColorPanel _forceSendAction:notification:firstResponder:] + 83
109 com.apple.AppKit 0x00007fff2c09fbd9 -[NSColorPickerWheel setColor:] + 291
110 com.apple.AppKit 0x00007fff2c0a1555 -[NSColorPickerWheelView mouseDown:] + 608
111 com.apple.AppKit 0x00007fff2bd945f0 -[NSWindow(NSEventRouting) _handleMouseDownEvent:isDelayedEvent:] + 4914
112 com.apple.AppKit 0x00007fff2bcfee21 -[NSWindow(NSEventRouting) _reallySendEvent:isDelayedEvent:] + 2612
113 com.apple.AppKit 0x00007fff2bcfe1c9 -[NSWindow(NSEventRouting) sendEvent:] + 349
114 com.apple.AppKit 0x00007fff2bcfc554 -[NSApplication(NSEvent) sendEvent:] + 352
115 libqcocoa.dylib 0x0000000119cb170a 0x119c78000 + 235274
116 com.apple.AppKit 0x00007fff2bb495bf -[NSApplication run] + 707
117 libqcocoa.dylib 0x0000000119cadde3 0x119c78000 + 220643
118 QtCore 0x000000010fea293f QEventLoop::exec(QFlags) + 431
119 QtCore 0x000000010fea7932 QCoreApplication::exec() + 130
120 QtWidgets.so 0x000000010ee6a7d2 meth_QApplication_exec_(_object*, _object*) + 82
121 org.python.python 0x0000000102174382 _PyMethodDef_RawFastCallKeywords + 226
122 org.python.python 0x00000001021738b9 _PyCFunction_FastCallKeywords + 41
123 org.python.python 0x0000000102248b60 call_function + 656
124 org.python.python 0x0000000102245817 _PyEval_EvalFrameDefault + 26567
125 org.python.python 0x0000000102173d61 function_code_fastcall + 177
126 org.python.python 0x0000000102248bd4 call_function + 772
127 org.python.python 0x0000000102245817 _PyEval_EvalFrameDefault + 26567
128 org.python.python 0x0000000102249a2c _PyEval_EvalCodeWithName + 3276
129 org.python.python 0x0000000102173879 _PyFunction_FastCallKeywords + 217
130 org.python.python 0x0000000102248bd4 call_function + 772
131 org.python.python 0x00000001022458ae _PyEval_EvalFrameDefault + 26718
132 org.python.python 0x0000000102249a2c _PyEval_EvalCodeWithName + 3276
133 org.python.python 0x000000010223efb0 PyEval_EvalCode + 48
134 org.python.python 0x000000010223c547 builtin_exec + 583
135 org.python.python 0x000000010217452d _PyMethodDef_RawFastCallKeywords + 653
136 org.python.python 0x00000001021738b9 _PyCFunction_FastCallKeywords + 41
137 org.python.python 0x0000000102248b60 call_function + 656
138 org.python.python 0x00000001022458ae _PyEval_EvalFrameDefault + 26718
139 org.python.python 0x0000000102249a2c _PyEval_EvalCodeWithName + 3276
140 org.python.python 0x0000000102173879 _PyFunction_FastCallKeywords + 217
141 org.python.python 0x0000000102248bd4 call_function + 772
142 org.python.python 0x00000001022458ae _PyEval_EvalFrameDefault + 26718
143 org.python.python 0x0000000102249a2c _PyEval_EvalCodeWithName + 3276
144 org.python.python 0x0000000102173377 _PyFunction_FastCallDict + 455
145 org.python.python 0x00000001022a3af3 pymain_run_module + 147
146 org.python.python 0x00000001022a2bdc pymain_main + 5900
147 org.python.python 0x00000001022a14c3 Py_Main + 51
148 edu.ucsf.cgl.ChimeraX 0x0000000102142dc8 main + 120
149 libdyld.dylib 0x00007fff6899dcc9 start + 1
Thread 1:
0 libsystem_kernel.dylib 0x00007fff68ae1882 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff68ba2425 _pthread_cond_wait + 698
2 libopenblasp-r0.3.7.dylib 0x0000000103a64c3b blas_thread_server + 619
3 libsystem_pthread.dylib 0x00007fff68ba2109 _pthread_start + 148
4 libsystem_pthread.dylib 0x00007fff68b9db8b thread_start + 15
Thread 2:
0 libsystem_kernel.dylib 0x00007fff68ae1882 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff68ba2425 _pthread_cond_wait + 698
2 libopenblasp-r0.3.7.dylib 0x0000000103a64c3b blas_thread_server + 619
3 libsystem_pthread.dylib 0x00007fff68ba2109 _pthread_start + 148
4 libsystem_pthread.dylib 0x00007fff68b9db8b thread_start + 15
Thread 3:
0 libsystem_kernel.dylib 0x00007fff68ae1882 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff68ba2425 _pthread_cond_wait + 698
2 libopenblasp-r0.3.7.dylib 0x0000000103a64c3b blas_thread_server + 619
3 libsystem_pthread.dylib 0x00007fff68ba2109 _pthread_start + 148
4 libsystem_pthread.dylib 0x00007fff68b9db8b thread_start + 15
Thread 4:: com.apple.NSEventThread
0 libsystem_kernel.dylib 0x00007fff68adedfa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff68adf170 mach_msg + 60
2 com.apple.CoreFoundation 0x00007fff2e8e8ef5 __CFRunLoopServiceMachPort + 247
3 com.apple.CoreFoundation 0x00007fff2e8e79c2 __CFRunLoopRun + 1319
4 com.apple.CoreFoundation 0x00007fff2e8e6e3e CFRunLoopRunSpecific + 462
5 com.apple.AppKit 0x00007fff2bcfa954 _NSEventThread + 132
6 libsystem_pthread.dylib 0x00007fff68ba2109 _pthread_start + 148
7 libsystem_pthread.dylib 0x00007fff68b9db8b thread_start + 15
Thread 5:: NetworkConfigWatcher
0 libsystem_kernel.dylib 0x00007fff68adedfa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff68adf170 mach_msg + 60
2 QtWebEngineCore 0x000000011485f32d 0x1126bd000 + 35267373
3 QtWebEngineCore 0x000000011485f22f 0x1126bd000 + 35267119
4 QtWebEngineCore 0x000000011481305d 0x1126bd000 + 34955357
5 QtWebEngineCore 0x000000011483c085 0x1126bd000 + 35123333
6 QtWebEngineCore 0x000000011488e9bc 0x1126bd000 + 35461564
7 QtWebEngineCore 0x00000001148ce717 0x1126bd000 + 35723031
8 libsystem_pthread.dylib 0x00007fff68ba2109 _pthread_start + 148
9 libsystem_pthread.dylib 0x00007fff68b9db8b thread_start + 15
Thread 6:: DnsConfigService
0 libsystem_kernel.dylib 0x00007fff68ae3766 kevent + 10
1 QtWebEngineCore 0x0000000114b209a9 0x1126bd000 + 38156713
2 QtWebEngineCore 0x0000000114b1dcbd 0x1126bd000 + 38145213
3 QtWebEngineCore 0x00000001148d4cdc 0x1126bd000 + 35749084
4 QtWebEngineCore 0x000000011483c085 0x1126bd000 + 35123333
5 QtWebEngineCore 0x000000011488e9bc 0x1126bd000 + 35461564
6 QtWebEngineCore 0x00000001148ce717 0x1126bd000 + 35723031
7 libsystem_pthread.dylib 0x00007fff68ba2109 _pthread_start + 148
8 libsystem_pthread.dylib 0x00007fff68b9db8b thread_start + 15
Thread 7:: TaskSchedulerServiceThread
0 libsystem_kernel.dylib 0x00007fff68ae3766 kevent + 10
1 QtWebEngineCore 0x0000000114b209a9 0x1126bd000 + 38156713
2 QtWebEngineCore 0x0000000114b1dcbd 0x1126bd000 + 38145213
3 QtWebEngineCore 0x00000001148d4cc4 0x1126bd000 + 35749060
4 QtWebEngineCore 0x000000011483c085 0x1126bd000 + 35123333
5 QtWebEngineCore 0x000000011487da74 0x1126bd000 + 35392116
6 QtWebEngineCore 0x000000011488e9bc 0x1126bd000 + 35461564
7 QtWebEngineCore 0x00000001148ce717 0x1126bd000 + 35723031
8 libsystem_pthread.dylib 0x00007fff68ba2109 _pthread_start + 148
9 libsystem_pthread.dylib 0x00007fff68b9db8b thread_start + 15
Thread 8:: TaskSchedulerForegroundWorker
0 libsystem_kernel.dylib 0x00007fff68adedfa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff68adf170 mach_msg + 60
2 QtWebEngineCore 0x000000011485f32d 0x1126bd000 + 35267373
3 QtWebEngineCore 0x000000011485f421 0x1126bd000 + 35267617
4 QtWebEngineCore 0x0000000114876d28 0x1126bd000 + 35364136
5 QtWebEngineCore 0x000000011487765b 0x1126bd000 + 35366491
6 QtWebEngineCore 0x00000001148772c4 0x1126bd000 + 35365572
7 QtWebEngineCore 0x00000001148ce717 0x1126bd000 + 35723031
8 libsystem_pthread.dylib 0x00007fff68ba2109 _pthread_start + 148
9 libsystem_pthread.dylib 0x00007fff68b9db8b thread_start + 15
Thread 9:: TaskSchedulerForegroundBlockingWorker
0 libsystem_kernel.dylib 0x00007fff68adedfa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff68adf170 mach_msg + 60
2 QtWebEngineCore 0x000000011485f32d 0x1126bd000 + 35267373
3 QtWebEngineCore 0x000000011485f421 0x1126bd000 + 35267617
4 QtWebEngineCore 0x0000000114876d28 0x1126bd000 + 35364136
5 QtWebEngineCore 0x000000011487765b 0x1126bd000 + 35366491
6 QtWebEngineCore 0x00000001148772c4 0x1126bd000 + 35365572
7 QtWebEngineCore 0x00000001148ce717 0x1126bd000 + 35723031
8 libsystem_pthread.dylib 0x00007fff68ba2109 _pthread_start + 148
9 libsystem_pthread.dylib 0x00007fff68b9db8b thread_start + 15
Thread 10:: TaskSchedulerBackgroundWorker
0 libsystem_kernel.dylib 0x00007fff68adedfa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff68adf170 mach_msg + 60
2 QtWebEngineCore 0x000000011485f32d 0x1126bd000 + 35267373
3 QtWebEngineCore 0x000000011485f421 0x1126bd000 + 35267617
4 QtWebEngineCore 0x0000000114876d28 0x1126bd000 + 35364136
5 QtWebEngineCore 0x000000011487765b 0x1126bd000 + 35366491
6 QtWebEngineCore 0x0000000114877234 0x1126bd000 + 35365428
7 QtWebEngineCore 0x00000001148ce717 0x1126bd000 + 35723031
8 libsystem_pthread.dylib 0x00007fff68ba2109 _pthread_start + 148
9 libsystem_pthread.dylib 0x00007fff68b9db8b thread_start + 15
Thread 11:: TaskSchedulerBackgroundBlockingWorker
0 libsystem_kernel.dylib 0x00007fff68adedfa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff68adf170 mach_msg + 60
2 QtWebEngineCore 0x000000011485f32d 0x1126bd000 + 35267373
3 QtWebEngineCore 0x000000011485f421 0x1126bd000 + 35267617
4 QtWebEngineCore 0x0000000114876d28 0x1126bd000 + 35364136
5 QtWebEngineCore 0x000000011487765b 0x1126bd000 + 35366491
6 QtWebEngineCore 0x0000000114877234 0x1126bd000 + 35365428
7 QtWebEngineCore 0x00000001148ce717 0x1126bd000 + 35723031
8 libsystem_pthread.dylib 0x00007fff68ba2109 _pthread_start + 148
9 libsystem_pthread.dylib 0x00007fff68b9db8b thread_start + 15
Thread 12:: Chrome_IOThread
0 libsystem_kernel.dylib 0x00007fff68ae3766 kevent + 10
1 QtWebEngineCore 0x0000000114b209a9 0x1126bd000 + 38156713
2 QtWebEngineCore 0x0000000114b1dcbd 0x1126bd000 + 38145213
3 QtWebEngineCore 0x00000001148d4cc4 0x1126bd000 + 35749060
4 QtWebEngineCore 0x000000011483c085 0x1126bd000 + 35123333
5 QtWebEngineCore 0x00000001141aafe4 0x1126bd000 + 28237796
6 QtWebEngineCore 0x000000011488e9bc 0x1126bd000 + 35461564
7 QtWebEngineCore 0x00000001148ce717 0x1126bd000 + 35723031
8 libsystem_pthread.dylib 0x00007fff68ba2109 _pthread_start + 148
9 libsystem_pthread.dylib 0x00007fff68b9db8b thread_start + 15
Thread 13:: TaskSchedulerSingleThreadSharedBackgroundBlocking0
0 libsystem_kernel.dylib 0x00007fff68adedfa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff68adf170 mach_msg + 60
2 QtWebEngineCore 0x000000011485f32d 0x1126bd000 + 35267373
3 QtWebEngineCore 0x000000011485f22f 0x1126bd000 + 35267119
4 QtWebEngineCore 0x0000000114876d1a 0x1126bd000 + 35364122
5 QtWebEngineCore 0x00000001148773bf 0x1126bd000 + 35365823
6 QtWebEngineCore 0x0000000114877264 0x1126bd000 + 35365476
7 QtWebEngineCore 0x00000001148ce717 0x1126bd000 + 35723031
8 libsystem_pthread.dylib 0x00007fff68ba2109 _pthread_start + 148
9 libsystem_pthread.dylib 0x00007fff68b9db8b thread_start + 15
Thread 14:: CompositorTileWorker1/70403
0 libsystem_kernel.dylib 0x00007fff68ae1882 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff68ba2425 _pthread_cond_wait + 698
2 QtWebEngineCore 0x00000001148ccfa8 0x1126bd000 + 35717032
3 QtWebEngineCore 0x00000001158534c8 0x1126bd000 + 51995848
4 QtWebEngineCore 0x000000011488d694 0x1126bd000 + 35456660
5 QtWebEngineCore 0x00000001148ce717 0x1126bd000 + 35723031
6 libsystem_pthread.dylib 0x00007fff68ba2109 _pthread_start + 148
7 libsystem_pthread.dylib 0x00007fff68b9db8b thread_start + 15
Thread 15:: AudioThread
0 libsystem_kernel.dylib 0x00007fff68adedfa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff68adf170 mach_msg + 60
2 QtWebEngineCore 0x000000011485f32d 0x1126bd000 + 35267373
3 QtWebEngineCore 0x000000011485f22f 0x1126bd000 + 35267119
4 QtWebEngineCore 0x000000011481305d 0x1126bd000 + 34955357
5 QtWebEngineCore 0x000000011483c085 0x1126bd000 + 35123333
6 QtWebEngineCore 0x000000011488e9bc 0x1126bd000 + 35461564
7 QtWebEngineCore 0x00000001148ce717 0x1126bd000 + 35723031
8 libsystem_pthread.dylib 0x00007fff68ba2109 _pthread_start + 148
9 libsystem_pthread.dylib 0x00007fff68b9db8b thread_start + 15
Thread 16:: NetworkConfigWatcher
0 libsystem_kernel.dylib 0x00007fff68adedfa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff68adf170 mach_msg + 60
2 QtWebEngineCore 0x000000011485f32d 0x1126bd000 + 35267373
3 QtWebEngineCore 0x000000011485f22f 0x1126bd000 + 35267119
4 QtWebEngineCore 0x000000011481305d 0x1126bd000 + 34955357
5 QtWebEngineCore 0x000000011483c085 0x1126bd000 + 35123333
6 QtWebEngineCore 0x000000011488e9bc 0x1126bd000 + 35461564
7 QtWebEngineCore 0x00000001148ce717 0x1126bd000 + 35723031
8 libsystem_pthread.dylib 0x00007fff68ba2109 _pthread_start + 148
9 libsystem_pthread.dylib 0x00007fff68b9db8b thread_start + 15
Thread 17:: Chrome_InProcGpuThread
0 libsystem_kernel.dylib 0x00007fff68adedfa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff68adf170 mach_msg + 60
2 QtWebEngineCore 0x000000011485f32d 0x1126bd000 + 35267373
3 QtWebEngineCore 0x0000000114813052 0x1126bd000 + 34955346
4 QtWebEngineCore 0x000000011483c085 0x1126bd000 + 35123333
5 QtWebEngineCore 0x000000011488e9bc 0x1126bd000 + 35461564
6 QtWebEngineCore 0x00000001148ce717 0x1126bd000 + 35723031
7 libsystem_pthread.dylib 0x00007fff68ba2109 _pthread_start + 148
8 libsystem_pthread.dylib 0x00007fff68b9db8b thread_start + 15
Thread 18:: Chrome_ChildIOThread
0 libsystem_kernel.dylib 0x00007fff68ae3766 kevent + 10
1 QtWebEngineCore 0x0000000114b209a9 0x1126bd000 + 38156713
2 QtWebEngineCore 0x0000000114b1dcbd 0x1126bd000 + 38145213
3 QtWebEngineCore 0x00000001148d4cdc 0x1126bd000 + 35749084
4 QtWebEngineCore 0x000000011483c085 0x1126bd000 + 35123333
5 QtWebEngineCore 0x000000011488e9bc 0x1126bd000 + 35461564
6 QtWebEngineCore 0x00000001148ce717 0x1126bd000 + 35723031
7 libsystem_pthread.dylib 0x00007fff68ba2109 _pthread_start + 148
8 libsystem_pthread.dylib 0x00007fff68b9db8b thread_start + 15
Thread 19:: TaskSchedulerSingleThreadForegroundBlocking1
0 libsystem_kernel.dylib 0x00007fff68adedfa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff68adf170 mach_msg + 60
2 QtWebEngineCore 0x000000011485f32d 0x1126bd000 + 35267373
3 QtWebEngineCore 0x000000011485f22f 0x1126bd000 + 35267119
4 QtWebEngineCore 0x0000000114876d1a 0x1126bd000 + 35364122
5 QtWebEngineCore 0x000000011487765b 0x1126bd000 + 35366491
6 QtWebEngineCore 0x0000000114877324 0x1126bd000 + 35365668
7 QtWebEngineCore 0x00000001148ce717 0x1126bd000 + 35723031
8 libsystem_pthread.dylib 0x00007fff68ba2109 _pthread_start + 148
9 libsystem_pthread.dylib 0x00007fff68b9db8b thread_start + 15
Thread 20:: NetworkConfigWatcher
0 libsystem_kernel.dylib 0x00007fff68adedfa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff68adf170 mach_msg + 60
2 QtWebEngineCore 0x000000011485f32d 0x1126bd000 + 35267373
3 QtWebEngineCore 0x000000011485f22f 0x1126bd000 + 35267119
4 QtWebEngineCore 0x000000011481305d 0x1126bd000 + 34955357
5 QtWebEngineCore 0x000000011483c085 0x1126bd000 + 35123333
6 QtWebEngineCore 0x000000011488e9bc 0x1126bd000 + 35461564
7 QtWebEngineCore 0x00000001148ce717 0x1126bd000 + 35723031
8 libsystem_pthread.dylib 0x00007fff68ba2109 _pthread_start + 148
9 libsystem_pthread.dylib 0x00007fff68b9db8b thread_start + 15
Thread 21:: TaskSchedulerForegroundWorker
0 libsystem_kernel.dylib 0x00007fff68adedfa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff68adf170 mach_msg + 60
2 QtWebEngineCore 0x000000011485f32d 0x1126bd000 + 35267373
3 QtWebEngineCore 0x000000011485f421 0x1126bd000 + 35267617
4 QtWebEngineCore 0x0000000114876d28 0x1126bd000 + 35364136
5 QtWebEngineCore 0x000000011487765b 0x1126bd000 + 35366491
6 QtWebEngineCore 0x00000001148772c4 0x1126bd000 + 35365572
7 QtWebEngineCore 0x00000001148ce717 0x1126bd000 + 35723031
8 libsystem_pthread.dylib 0x00007fff68ba2109 _pthread_start + 148
9 libsystem_pthread.dylib 0x00007fff68b9db8b thread_start + 15
Thread 22:
0 libsystem_pthread.dylib 0x00007fff68b9db68 start_wqthread + 0
Thread 23:
0 libsystem_pthread.dylib 0x00007fff68b9db68 start_wqthread + 0
Thread 24:
0 libsystem_pthread.dylib 0x00007fff68b9db68 start_wqthread + 0
Thread 25:: TaskSchedulerForegroundWorker
0 libsystem_kernel.dylib 0x00007fff68adedfa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff68adf170 mach_msg + 60
2 QtWebEngineCore 0x000000011485f32d 0x1126bd000 + 35267373
3 QtWebEngineCore 0x000000011485f421 0x1126bd000 + 35267617
4 QtWebEngineCore 0x0000000114876d28 0x1126bd000 + 35364136
5 QtWebEngineCore 0x00000001148773bf 0x1126bd000 + 35365823
6 QtWebEngineCore 0x00000001148772c4 0x1126bd000 + 35365572
7 QtWebEngineCore 0x00000001148ce717 0x1126bd000 + 35723031
8 libsystem_pthread.dylib 0x00007fff68ba2109 _pthread_start + 148
9 libsystem_pthread.dylib 0x00007fff68b9db8b thread_start + 15
Thread 26:
0 libsystem_kernel.dylib 0x00007fff68ae1882 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff68ba2425 _pthread_cond_wait + 698
2 org.python.python 0x000000010228d0af PyThread_acquire_lock_timed + 351
3 org.python.python 0x00000001022d89df acquire_timed + 111
4 org.python.python 0x00000001022d875c lock_PyThread_acquire_lock + 44
5 org.python.python 0x000000010217456a _PyMethodDef_RawFastCallKeywords + 714
6 org.python.python 0x000000010217a571 _PyMethodDescr_FastCallKeywords + 81
7 org.python.python 0x0000000102248bfe call_function + 814
8 org.python.python 0x00000001022457fa _PyEval_EvalFrameDefault + 26538
9 org.python.python 0x0000000102249a2c _PyEval_EvalCodeWithName + 3276
10 org.python.python 0x0000000102173879 _PyFunction_FastCallKeywords + 217
11 org.python.python 0x0000000102248bd4 call_function + 772
12 org.python.python 0x00000001022457fa _PyEval_EvalFrameDefault + 26538
13 org.python.python 0x0000000102249a2c _PyEval_EvalCodeWithName + 3276
14 org.python.python 0x0000000102173879 _PyFunction_FastCallKeywords + 217
15 org.python.python 0x0000000102248bd4 call_function + 772
16 org.python.python 0x00000001022457fa _PyEval_EvalFrameDefault + 26538
17 org.python.python 0x0000000102173d61 function_code_fastcall + 177
18 org.python.python 0x0000000102248bd4 call_function + 772
19 org.python.python 0x00000001022457fa _PyEval_EvalFrameDefault + 26538
20 org.python.python 0x0000000102173d61 function_code_fastcall + 177
21 org.python.python 0x0000000102248bd4 call_function + 772
22 org.python.python 0x00000001022457fa _PyEval_EvalFrameDefault + 26538
23 org.python.python 0x0000000102173d61 function_code_fastcall + 177
24 org.python.python 0x0000000102174873 _PyObject_Call_Prepend + 131
25 org.python.python 0x00000001021739d8 PyObject_Call + 136
26 org.python.python 0x00000001022d9287 t_bootstrap + 71
27 org.python.python 0x000000010228cd19 pythread_wrapper + 25
28 libsystem_pthread.dylib 0x00007fff68ba2109 _pthread_start + 148
29 libsystem_pthread.dylib 0x00007fff68b9db8b thread_start + 15
Thread 0 crashed with X86 Thread State (64-bit):
rax: 0x0000000000000000 rbx: 0x000000010e60cdc0 rcx: 0x00007fc5b1577418 rdx: 0x0000000000000000
rdi: 0x0000000000000307 rsi: 0x000000000000000b rbp: 0x00007fc5b1577440 rsp: 0x00007fc5b1577418
r8: 0x00007fc5b1577f48 r9: 0x2db9e5889f30dd0b r10: 0x000000010e60cdc0 r11: 0x0000000000000246
r12: 0x0000000000000307 r13: 0x000000015240a0d0 r14: 0x000000000000000b r15: 0x0000000000000016
rip: 0x00007fff68ae533a rfl: 0x0000000000000246 cr2: 0x00007fc5b15768c0
Logical CPU: 0
Error Code: 0x02000148
Trap Number: 133
Binary Images:
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0x102ca9000 - 0x102cb6ff7 +_ssl.cpython-37m-darwin.so (0) /Applications/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/_ssl.cpython-37m-darwin.so
0x102ccc000 - 0x102cd5ffb +_socket.cpython-37m-darwin.so (0) /Applications/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/_socket.cpython-37m-darwin.so
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0x102d35000 - 0x102d39ffb +_struct.cpython-37m-darwin.so (0) /Applications/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/_struct.cpython-37m-darwin.so
0x102d47000 - 0x102d4bff7 +binascii.cpython-37m-darwin.so (0) /Applications/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/binascii.cpython-37m-darwin.so
0x102e54000 - 0x102e62ff3 +_datetime.cpython-37m-darwin.so (0) /Applications/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/_datetime.cpython-37m-darwin.so
0x102eb2000 - 0x102eb2ff3 +_scproxy.cpython-37m-darwin.so (0) /Applications/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/_scproxy.cpython-37m-darwin.so
0x102eba000 - 0x102ef8ff7 +_decimal.cpython-37m-darwin.so (0) /Applications/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/_decimal.cpython-37m-darwin.so
0x102f5c000 - 0x102f89ff3 +pyexpat.cpython-37m-darwin.so (0) /Applications/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/pyexpat.cpython-37m-darwin.so
0x102fa1000 - 0x102fa2ff3 +_queue.cpython-37m-darwin.so (0) /Applications/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/_queue.cpython-37m-darwin.so
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0x1030b4000 - 0x1030c6fff +_pickle.cpython-37m-darwin.so (0) /Applications/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/_pickle.cpython-37m-darwin.so
0x103117000 - 0x10311affb +_csv.cpython-37m-darwin.so (0) /Applications/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/_csv.cpython-37m-darwin.so
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0x10dcab000 - 0x10dd2dfff +_generator.cpython-37m-darwin.so (0) /Applications/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numpy/random/_generator.cpython-37m-darwin.so
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0x10de96000 - 0x10de97ffb +libappdirs.dylib (0) /Applications/ChimeraX-1.1.1.app/Contents/lib/libappdirs.dylib
0x10de9f000 - 0x10dec0ffb +_serialize.cpython-37m-darwin.so (0) /Applications/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/chimerax/core/_serialize.cpython-37m-darwin.so
0x10dee0000 - 0x10def8ffb +_cmsgpack.cpython-37m-darwin.so (0) /Applications/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/msgpack/_cmsgpack.cpython-37m-darwin.so
0x10df51000 - 0x10dfacff7 +_imaging.cpython-37m-darwin.so (0) /Applications/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/PIL/_imaging.cpython-37m-darwin.so
0x10dfdb000 - 0x10e013ff3 +libjpeg.9.dylib (0) /Applications/ChimeraX-1.1.1.app/Contents/lib/python3.7/site-packages/PIL/.dylibs/libjpeg.9.dylib
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0x10e0b0000 - 0x10e0cbff7 +libz.1.2.11.dylib (0) /Applications/ChimeraX-1.1.1.app/Contents/lib/python3.7/site-packages/PIL/.dylibs/libz.1.2.11.dylib
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0x7fff65c5b000 - 0x7fff65c67fff libbz2.1.0.dylib (44) /usr/lib/libbz2.1.0.dylib
0x7fff65c68000 - 0x7fff65cbafff libc++.1.dylib (902.1) /usr/lib/libc++.1.dylib
0x7fff65cbb000 - 0x7fff65cd0ffb libc++abi.dylib (902) /usr/lib/libc++abi.dylib
0x7fff65cd1000 - 0x7fff65cd1fff libcharset.1.dylib (59) /usr/lib/libcharset.1.dylib
0x7fff65cd2000 - 0x7fff65ce3fff libcmph.dylib (8) /usr/lib/libcmph.dylib
0x7fff65ce4000 - 0x7fff65cfbfd7 libcompression.dylib (87) /usr/lib/libcompression.dylib
0x7fff65fd5000 - 0x7fff65febff7 libcoretls.dylib (167) /usr/lib/libcoretls.dylib
0x7fff65fec000 - 0x7fff65fedfff libcoretls_cfhelpers.dylib (167) /usr/lib/libcoretls_cfhelpers.dylib
0x7fff66490000 - 0x7fff66594fef libcrypto.44.dylib (47.140.1) /usr/lib/libcrypto.44.dylib
0x7fff66597000 - 0x7fff665a2fff libcsfde.dylib (551) /usr/lib/libcsfde.dylib
0x7fff665aa000 - 0x7fff66609ff7 libcups.2.dylib (483.6) /usr/lib/libcups.2.dylib
0x7fff6660b000 - 0x7fff66670ff7 libcurl.4.dylib (118.120.2) /usr/lib/libcurl.4.dylib
0x7fff66713000 - 0x7fff66713fff libenergytrace.dylib (21) /usr/lib/libenergytrace.dylib
0x7fff66714000 - 0x7fff6672cfff libexpat.1.dylib (19.60.2) /usr/lib/libexpat.1.dylib
0x7fff6673a000 - 0x7fff6673cfff libfakelink.dylib (149.1) /usr/lib/libfakelink.dylib
0x7fff6674b000 - 0x7fff66750fff libgermantok.dylib (24) /usr/lib/libgermantok.dylib
0x7fff66751000 - 0x7fff6675aff7 libheimdal-asn1.dylib (564.140.1) /usr/lib/libheimdal-asn1.dylib
0x7fff6675b000 - 0x7fff6684bfff libiconv.2.dylib (59) /usr/lib/libiconv.2.dylib
0x7fff6684c000 - 0x7fff66aa3fff libicucore.A.dylib (64260.0.1) /usr/lib/libicucore.A.dylib
0x7fff66abd000 - 0x7fff66abefff liblangid.dylib (133) /usr/lib/liblangid.dylib
0x7fff66abf000 - 0x7fff66ad7ff3 liblzma.5.dylib (16) /usr/lib/liblzma.5.dylib
0x7fff66aef000 - 0x7fff66b96ff7 libmecab.dylib (883.11) /usr/lib/libmecab.dylib
0x7fff66b97000 - 0x7fff66df9ff1 libmecabra.dylib (883.11) /usr/lib/libmecabra.dylib
0x7fff67166000 - 0x7fff67195fff libncurses.5.4.dylib (57) /usr/lib/libncurses.5.4.dylib
0x7fff672c5000 - 0x7fff67741ff5 libnetwork.dylib (1880.120.4) /usr/lib/libnetwork.dylib
0x7fff67742000 - 0x7fff67759fff libnetworkextension.dylib (1095.140.2) /usr/lib/libnetworkextension.dylib
0x7fff677e2000 - 0x7fff67815fde libobjc.A.dylib (787.1) /usr/lib/libobjc.A.dylib
0x7fff67816000 - 0x7fff67817ff7 libodfde.dylib (26) /usr/lib/libodfde.dylib
0x7fff67828000 - 0x7fff6782cfff libpam.2.dylib (25.100.1) /usr/lib/libpam.2.dylib
0x7fff6782f000 - 0x7fff67865ff7 libpcap.A.dylib (89.120.1) /usr/lib/libpcap.A.dylib
0x7fff678a5000 - 0x7fff678b3ff9 libperfcheck.dylib (37.100.2) /usr/lib/libperfcheck.dylib
0x7fff678e9000 - 0x7fff67901fff libresolv.9.dylib (67.40.1) /usr/lib/libresolv.9.dylib
0x7fff67903000 - 0x7fff67947ff7 libsandbox.1.dylib (1217.141.2) /usr/lib/libsandbox.1.dylib
0x7fff67948000 - 0x7fff6795aff7 libsasl2.2.dylib (213.120.1) /usr/lib/libsasl2.2.dylib
0x7fff6795b000 - 0x7fff6795cff7 libspindump.dylib (281.3) /usr/lib/libspindump.dylib
0x7fff6795d000 - 0x7fff67b47ff7 libsqlite3.dylib (308.5) /usr/lib/libsqlite3.dylib
0x7fff67c3b000 - 0x7fff67c68ffb libssl.46.dylib (47.140.1) /usr/lib/libssl.46.dylib
0x7fff67d3d000 - 0x7fff67d97ff8 libusrtcp.dylib (1880.120.4) /usr/lib/libusrtcp.dylib
0x7fff67d98000 - 0x7fff67d9bffb libutil.dylib (57) /usr/lib/libutil.dylib
0x7fff67d9c000 - 0x7fff67da9ff7 libxar.1.dylib (425.2) /usr/lib/libxar.1.dylib
0x7fff67daf000 - 0x7fff67e91fff libxml2.2.dylib (33.5) /usr/lib/libxml2.2.dylib
0x7fff67e95000 - 0x7fff67ebdfff libxslt.1.dylib (16.9) /usr/lib/libxslt.1.dylib
0x7fff67ebe000 - 0x7fff67ed0ff3 libz.1.dylib (76) /usr/lib/libz.1.dylib
0x7fff6877f000 - 0x7fff68784ff3 libcache.dylib (83) /usr/lib/system/libcache.dylib
0x7fff68785000 - 0x7fff68790fff libcommonCrypto.dylib (60165.120.1) /usr/lib/system/libcommonCrypto.dylib
0x7fff68791000 - 0x7fff68798fff libcompiler_rt.dylib (101.2) /usr/lib/system/libcompiler_rt.dylib
0x7fff68799000 - 0x7fff687a2ff7 libcopyfile.dylib (166.40.1) /usr/lib/system/libcopyfile.dylib
0x7fff687a3000 - 0x7fff68835fdb libcorecrypto.dylib (866.140.1) /usr/lib/system/libcorecrypto.dylib
0x7fff68942000 - 0x7fff68982ff0 libdispatch.dylib (1173.100.2) /usr/lib/system/libdispatch.dylib
0x7fff68983000 - 0x7fff689b9fff libdyld.dylib (750.6) /usr/lib/system/libdyld.dylib
0x7fff689ba000 - 0x7fff689baffb libkeymgr.dylib (30) /usr/lib/system/libkeymgr.dylib
0x7fff689bb000 - 0x7fff689c7ff3 libkxld.dylib (6153.141.2) /usr/lib/system/libkxld.dylib
0x7fff689c8000 - 0x7fff689c8ff7 liblaunch.dylib (1738.140.1) /usr/lib/system/liblaunch.dylib
0x7fff689c9000 - 0x7fff689ceff7 libmacho.dylib (959.0.1) /usr/lib/system/libmacho.dylib
0x7fff689cf000 - 0x7fff689d1ff3 libquarantine.dylib (110.40.3) /usr/lib/system/libquarantine.dylib
0x7fff689d2000 - 0x7fff689d3ff7 libremovefile.dylib (48) /usr/lib/system/libremovefile.dylib
0x7fff689d4000 - 0x7fff689ebff3 libsystem_asl.dylib (377.60.2) /usr/lib/system/libsystem_asl.dylib
0x7fff689ec000 - 0x7fff689ecff7 libsystem_blocks.dylib (74) /usr/lib/system/libsystem_blocks.dylib
0x7fff689ed000 - 0x7fff68a74fff libsystem_c.dylib (1353.100.2) /usr/lib/system/libsystem_c.dylib
0x7fff68a75000 - 0x7fff68a78ffb libsystem_configuration.dylib (1061.141.1) /usr/lib/system/libsystem_configuration.dylib
0x7fff68a79000 - 0x7fff68a7cfff libsystem_coreservices.dylib (114) /usr/lib/system/libsystem_coreservices.dylib
0x7fff68a7d000 - 0x7fff68a85fff libsystem_darwin.dylib (1353.100.2) /usr/lib/system/libsystem_darwin.dylib
0x7fff68a86000 - 0x7fff68a8dfff libsystem_dnssd.dylib (1096.100.3) /usr/lib/system/libsystem_dnssd.dylib
0x7fff68a8e000 - 0x7fff68a8fffb libsystem_featureflags.dylib (17) /usr/lib/system/libsystem_featureflags.dylib
0x7fff68a90000 - 0x7fff68addff7 libsystem_info.dylib (538) /usr/lib/system/libsystem_info.dylib
0x7fff68ade000 - 0x7fff68b0aff7 libsystem_kernel.dylib (6153.141.2) /usr/lib/system/libsystem_kernel.dylib
0x7fff68b0b000 - 0x7fff68b52fff libsystem_m.dylib (3178) /usr/lib/system/libsystem_m.dylib
0x7fff68b53000 - 0x7fff68b7afff libsystem_malloc.dylib (283.100.6) /usr/lib/system/libsystem_malloc.dylib
0x7fff68b7b000 - 0x7fff68b88ffb libsystem_networkextension.dylib (1095.140.2) /usr/lib/system/libsystem_networkextension.dylib
0x7fff68b89000 - 0x7fff68b92ff7 libsystem_notify.dylib (241.100.2) /usr/lib/system/libsystem_notify.dylib
0x7fff68b93000 - 0x7fff68b9bfef libsystem_platform.dylib (220.100.1) /usr/lib/system/libsystem_platform.dylib
0x7fff68b9c000 - 0x7fff68ba6fff libsystem_pthread.dylib (416.100.3) /usr/lib/system/libsystem_pthread.dylib
0x7fff68ba7000 - 0x7fff68babff3 libsystem_sandbox.dylib (1217.141.2) /usr/lib/system/libsystem_sandbox.dylib
0x7fff68bac000 - 0x7fff68baefff libsystem_secinit.dylib (62.100.2) /usr/lib/system/libsystem_secinit.dylib
0x7fff68baf000 - 0x7fff68bb6ffb libsystem_symptoms.dylib (1238.120.1) /usr/lib/system/libsystem_symptoms.dylib
0x7fff68bb7000 - 0x7fff68bcdff2 libsystem_trace.dylib (1147.120) /usr/lib/system/libsystem_trace.dylib
0x7fff68bcf000 - 0x7fff68bd4ff7 libunwind.dylib (35.4) /usr/lib/system/libunwind.dylib
0x7fff68bd5000 - 0x7fff68c0affe libxpc.dylib (1738.140.1) /usr/lib/system/libxpc.dylib
External Modification Summary:
Calls made by other processes targeting this process:
task_for_pid: 1
thread_create: 0
thread_set_state: 0
Calls made by this process:
task_for_pid: 0
thread_create: 0
thread_set_state: 0
Calls made by all processes on this machine:
task_for_pid: 27751
thread_create: 0
thread_set_state: 0
VM Region Summary:
ReadOnly portion of Libraries: Total=922.0M resident=0K(0%) swapped_out_or_unallocated=922.0M(100%)
Writable regions: Total=1.0G written=0K(0%) resident=0K(0%) swapped_out=0K(0%) unallocated=1.0G(100%)
VIRTUAL REGION
REGION TYPE SIZE COUNT (non-coalesced)
=========== ======= =======
Accelerate framework 768K 6
Activity Tracing 256K 1
CG backing stores 992K 2
CG image 1056K 32
CoreAnimation 6216K 97
CoreGraphics 8K 1
CoreImage 84K 9
CoreUI image data 3396K 30
Foundation 32K 2
Kernel Alloc Once 8K 1
MALLOC 311.6M 442
MALLOC guard page 32K 7
MALLOC_LARGE (reserved) 384K 1 reserved VM address space (unallocated)
MALLOC_NANO (reserved) 384.0M 1 reserved VM address space (unallocated)
OpenGL GLSL 512K 6
PROTECTED_MEMORY 4K 1
STACK GUARD 104K 26
Stack 160.7M 27
Stack Guard 56.0M 1
VM_ALLOCATE 160.0M 313
VM_ALLOCATE (reserved) 32.0M 1 reserved VM address space (unallocated)
__DATA 51.4M 541
__DATA_CONST 76K 4
__FONT_DATA 4K 1
__GLSLBUILTINS 5176K 1
__LINKEDIT 412.5M 134
__OBJC_RO 32.3M 1
__OBJC_RW 1908K 2
__TEXT 509.5M 506
__UNICODE 564K 1
mapped file 881.2M 336
shared memory 660K 20
=========== ======= =======
TOTAL 2.9G 2554
TOTAL, minus reserved VM space 2.5G 2554
Log:
UCSF ChimeraX version: 1.1.1 (2020-10-07)
© 2016-2020 Regents of the University of California. All rights reserved.
How to cite UCSF ChimeraX
> open /Users/zhouyanxia/Desktop/pfENT1/model/pfENT1-NB19.pdb
Summary of feedback from opening
/Users/zhouyanxia/Desktop/pfENT1/model/pfENT1-NB19.pdb
---
warning | Ignored bad PDB record found on line 3967
END
Chain information for pfENT1-NB19.pdb #1
---
Chain | Description
A | No description available
B | No description available
> set bgColor white
> select /A
926 atoms, 943 bonds, 123 residues, 1 model selected
OpenGL version: 4.1 INTEL-14.7.8
OpenGL renderer: Intel(R) Iris(TM) Plus Graphics OpenGL Engine
OpenGL vendor: Intel Inc.Hardware:
Hardware Overview:
Model Name: MacBook Air
Model Identifier: MacBookAir9,1
Processor Name: Quad-Core Intel Core i5
Processor Speed: 1.1 GHz
Number of Processors: 1
Total Number of Cores: 4
L2 Cache (per Core): 512 KB
L3 Cache: 6 MB
Hyper-Threading Technology: Enabled
Memory: 8 GB
Boot ROM Version: 1554.120.19.0.0 (iBridge: 18.16.14663.0.0,0)
Software:
System Software Overview:
System Version: macOS 10.15.7 (19H2)
Kernel Version: Darwin 19.6.0
Time since boot: 1 day 7:28
Graphics/Displays:
Intel Iris Plus Graphics:
Chipset Model: Intel Iris Plus Graphics
Type: GPU
Bus: Built-In
VRAM (Dynamic, Max): 1536 MB
Vendor: Intel
Device ID: 0x8a51
Revision ID: 0x0007
Metal: Supported, feature set macOS GPUFamily2 v1
Displays:
Color LCD:
Display Type: Built-In Retina LCD
Resolution: 2560 x 1600 Retina
Framebuffer Depth: 30-Bit Color (ARGB2101010)
Main Display: Yes
Mirror: Off
Online: Yes
Automatically Adjust Brightness: No
Connection Type: Internal
PyQt version: 5.12.3
Compiled Qt version: 5.12.4
Runtime Qt version: 5.12.9
Installed Packages:
alabaster: 0.7.12
appdirs: 1.4.4
appnope: 0.1.0
Babel: 2.8.0
backcall: 0.2.0
blockdiag: 2.0.1
certifi: 2020.6.20
chardet: 3.0.4
ChimeraX-AddH: 2.1.1
ChimeraX-AlignmentAlgorithms: 2.0
ChimeraX-AlignmentHdrs: 3.2
ChimeraX-AlignmentMatrices: 2.0
ChimeraX-Alignments: 2.1
ChimeraX-Arrays: 1.0
ChimeraX-Atomic: 1.6.1
ChimeraX-AtomSearch: 2.0
ChimeraX-AxesPlanes: 2.0
ChimeraX-BasicActions: 1.1
ChimeraX-BILD: 1.0
ChimeraX-BlastProtein: 1.0.1
ChimeraX-BondRot: 2.0
ChimeraX-BugReporter: 1.0
ChimeraX-BuildStructure: 2.0
ChimeraX-Bumps: 1.0
ChimeraX-BundleBuilder: 1.0
ChimeraX-ButtonPanel: 1.0
ChimeraX-CageBuilder: 1.0
ChimeraX-CellPack: 1.0
ChimeraX-Centroids: 1.1
ChimeraX-ChemGroup: 2.0
ChimeraX-Clashes: 2.0
ChimeraX-ColorActions: 1.0
ChimeraX-ColorGlobe: 1.0
ChimeraX-CommandLine: 1.1.3
ChimeraX-ConnectStructure: 2.0
ChimeraX-Contacts: 1.0
ChimeraX-Core: 1.1.1
ChimeraX-CoreFormats: 1.0
ChimeraX-coulombic: 1.0.1
ChimeraX-Crosslinks: 1.0
ChimeraX-Crystal: 1.0
ChimeraX-DataFormats: 1.0
ChimeraX-Dicom: 1.0
ChimeraX-DistMonitor: 1.1
ChimeraX-DistUI: 1.0
ChimeraX-Dssp: 2.0
ChimeraX-EMDB-SFF: 1.0
ChimeraX-ExperimentalCommands: 1.0
ChimeraX-FileHistory: 1.0
ChimeraX-FunctionKey: 1.0
ChimeraX-Geometry: 1.1
ChimeraX-gltf: 1.0
ChimeraX-Graphics: 1.0
ChimeraX-Hbonds: 2.0
ChimeraX-Help: 1.0
ChimeraX-HKCage: 1.0
ChimeraX-IHM: 1.0
ChimeraX-ImageFormats: 1.0
ChimeraX-IMOD: 1.0
ChimeraX-IO: 1.0
ChimeraX-Label: 1.0
ChimeraX-ListInfo: 1.0
ChimeraX-Log: 1.1.1
ChimeraX-LookingGlass: 1.1
ChimeraX-Map: 1.0.1
ChimeraX-MapData: 2.0
ChimeraX-MapEraser: 1.0
ChimeraX-MapFilter: 2.0
ChimeraX-MapFit: 2.0
ChimeraX-MapSeries: 2.0
ChimeraX-Markers: 1.0
ChimeraX-Mask: 1.0
ChimeraX-MatchMaker: 1.1
ChimeraX-MDcrds: 2.0
ChimeraX-MedicalToolbar: 1.0.1
ChimeraX-Meeting: 1.0
ChimeraX-MLP: 1.0
ChimeraX-mmCIF: 2.2
ChimeraX-MMTF: 2.0
ChimeraX-Modeller: 1.0
ChimeraX-ModelPanel: 1.0
ChimeraX-ModelSeries: 1.0
ChimeraX-Mol2: 2.0
ChimeraX-Morph: 1.0
ChimeraX-MouseModes: 1.0
ChimeraX-Movie: 1.0
ChimeraX-Neuron: 1.0
ChimeraX-Nucleotides: 2.0
ChimeraX-OpenCommand: 1.2.1
ChimeraX-PDB: 2.1
ChimeraX-PDBBio: 1.0
ChimeraX-PickBlobs: 1.0
ChimeraX-Positions: 1.0
ChimeraX-PresetMgr: 1.0
ChimeraX-PubChem: 2.0
ChimeraX-Read-Pbonds: 1.0
ChimeraX-Registration: 1.1
ChimeraX-RemoteControl: 1.0
ChimeraX-ResidueFit: 1.0
ChimeraX-RestServer: 1.0
ChimeraX-RNALayout: 1.0
ChimeraX-RotamerLibMgr: 2.0
ChimeraX-RotamerLibsDunbrack: 2.0
ChimeraX-RotamerLibsDynameomics: 2.0
ChimeraX-RotamerLibsRichardson: 2.0
ChimeraX-SaveCommand: 1.2
ChimeraX-SchemeMgr: 1.0
ChimeraX-SDF: 2.0
ChimeraX-Segger: 1.0
ChimeraX-Segment: 1.0
ChimeraX-SeqView: 2.2
ChimeraX-Shape: 1.0.1
ChimeraX-Shell: 1.0
ChimeraX-Shortcuts: 1.0
ChimeraX-ShowAttr: 1.0
ChimeraX-ShowSequences: 1.0
ChimeraX-SideView: 1.0
ChimeraX-Smiles: 2.0
ChimeraX-SmoothLines: 1.0
ChimeraX-SpaceNavigator: 1.0
ChimeraX-StdCommands: 1.0.4
ChimeraX-STL: 1.0
ChimeraX-Storm: 1.0
ChimeraX-Struts: 1.0
ChimeraX-Surface: 1.0
ChimeraX-SwapAA: 2.0
ChimeraX-SwapRes: 2.0
ChimeraX-TapeMeasure: 1.0
ChimeraX-Test: 1.0
ChimeraX-Toolbar: 1.0
ChimeraX-ToolshedUtils: 1.0
ChimeraX-Tug: 1.0
ChimeraX-UI: 1.2.3
ChimeraX-uniprot: 2.0
ChimeraX-ViewDockX: 1.0
ChimeraX-Vive: 1.1
ChimeraX-VolumeMenu: 1.0
ChimeraX-VTK: 1.0
ChimeraX-WavefrontOBJ: 1.0
ChimeraX-WebCam: 1.0
ChimeraX-WebServices: 1.0
ChimeraX-Zone: 1.0
colorama: 0.4.3
comtypes: 1.1.7
cxservices: 1.0
cycler: 0.10.0
Cython: 0.29.20
decorator: 4.4.2
distlib: 0.3.1
docutils: 0.16
filelock: 3.0.12
funcparserlib: 0.3.6
grako: 3.16.5
h5py: 2.10.0
html2text: 2020.1.16
idna: 2.10
ihm: 0.16
imagecodecs: 2020.5.30
imagecodecs-lite: 2020.1.31
imagesize: 1.2.0
ipykernel: 5.3.0
ipython: 7.15.0
ipython-genutils: 0.2.0
jedi: 0.17.2
Jinja2: 2.11.2
jupyter-client: 6.1.3
jupyter-core: 4.6.3
kiwisolver: 1.2.0
line-profiler: 2.1.2
lxml: 4.5.1
MarkupSafe: 1.1.1
matplotlib: 3.2.1
msgpack: 1.0.0
netifaces: 0.10.9
networkx: 2.4
numexpr: 2.7.1
numpy: 1.18.5
numpydoc: 1.0.0
openvr: 1.12.501
packaging: 20.4
parso: 0.7.1
pexpect: 4.8.0
pickleshare: 0.7.5
Pillow: 7.1.2
pip: 20.2.2
pkginfo: 1.5.0.1
prompt-toolkit: 3.0.7
psutil: 5.7.0
ptyprocess: 0.6.0
pycollada: 0.7.1
pydicom: 2.0.0
Pygments: 2.6.1
PyOpenGL: 3.1.5
PyOpenGL-accelerate: 3.1.5
pyparsing: 2.4.7
PyQt5-commercial: 5.12.3
PyQt5-sip: 4.19.19
PyQtWebEngine-commercial: 5.12.1
python-dateutil: 2.8.1
pytz: 2020.1
pyzmq: 19.0.2
qtconsole: 4.7.4
QtPy: 1.9.0
RandomWords: 0.3.0
requests: 2.24.0
scipy: 1.4.1
setuptools: 49.4.0
sfftk-rw: 0.6.6.dev0
six: 1.15.0
snowballstemmer: 2.0.0
sortedcontainers: 2.2.2
Sphinx: 3.1.1
sphinxcontrib-applehelp: 1.0.2
sphinxcontrib-blockdiag: 2.0.0
sphinxcontrib-devhelp: 1.0.2
sphinxcontrib-htmlhelp: 1.0.3
sphinxcontrib-jsmath: 1.0.1
sphinxcontrib-qthelp: 1.0.3
sphinxcontrib-serializinghtml: 1.1.4
suds-jurko: 0.6
tables: 3.6.1
tifffile: 2020.6.3
tinyarray: 1.2.2
tornado: 6.0.4
traitlets: 5.0.4
urllib3: 1.25.10
wcwidth: 0.2.5
webcolors: 1.11.1
wheel: 0.34.2
Change History (2)
comment:1 by , 4 years ago
| Cc: | added |
|---|---|
| Component: | Unassigned → Core |
| Owner: | set to |
| Platform: | → all |
| Project: | → ChimeraX |
| Status: | new → accepted |
| Summary: | ChimeraX bug report submission → Crash in garbage collection during new-object allocation |
comment:2 by , 4 years ago
| Resolution: | → can't reproduce |
|---|---|
| Status: | accepted → closed |
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