![[ChimeraX Issue Tracking System]](/trac/ChimeraX/chrome/site/ChimeraX-icon.svg){kind=icon}
Opened 4 years ago
Closed 4 years ago
#4849 closed enhancement (worksforme)
Test of crash report including log
| Reported by: | Owned by: | Tom Goddard | |
|---|---|---|---|
| Priority: | normal | Milestone: | |
| Component: | Core | Version: | |
| Keywords: | Cc: | ||
| Blocked By: | Blocking: | ||
| Notify when closed: | Platform: | all | |
| Project: | ChimeraX |
Description
The following bug report has been submitted:
Platform: macOS-10.15.7-x86_64-i386-64bit
ChimeraX Version: 1.3.dev202105180049 (2021-05-18 00:49:36 UTC)
Description
Testing new crash report inclusion of pre-crash log.
Fatal Python error: Aborted
Current thread 0x000000011168fdc0 (most recent call first):
File "/Users/goddard/ucsf/chimerax/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/ui/gui.py", line 293 in event_loop
File "/Users/goddard/ucsf/chimerax/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/ChimeraX_main.py", line 866 in init
File "/Users/goddard/ucsf/chimerax/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/ChimeraX_main.py", line 1015 in
File "/Users/goddard/ucsf/chimerax/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/runpy.py", line 87 in _run_code
File "/Users/goddard/ucsf/chimerax/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/runpy.py", line 197 in _run_module_as_main
Process: ChimeraX [76352]
Path: /Users/USER/*/ChimeraX.app/Contents/MacOS/ChimeraX
Identifier: edu.ucsf.cgl.ChimeraX
Version: 1.3.0 (1.3.0.0)
Code Type: X86-64 (Native)
Parent Process: bash [1934]
Responsible: Emacs-x86_64-10_14 [1887]
User ID: 501
Date/Time: 2021-07-01 17:39:43.544 -0700
OS Version: Mac OS X 10.15.7 (19H1030)
Report Version: 12
Bridge OS Version: 5.3 (18P4556)
Anonymous UUID: 495A8E9E-3C7C-FE83-D6D8-5292E03EDAAC
Sleep/Wake UUID: 30CE7346-BFB5-40D7-9187-5BC294F74C3D
Time Awake Since Boot: 1200000 seconds
Time Since Wake: 3900 seconds
System Integrity Protection: enabled
Crashed Thread: 0 CrBrowserMain Dispatch queue: com.apple.main-thread
Exception Type: EXC_CRASH (SIGABRT)
Exception Codes: 0x0000000000000000, 0x0000000000000000
Exception Note: EXC_CORPSE_NOTIFY
Thread 0 Crashed:: CrBrowserMain Dispatch queue: com.apple.main-thread
0 libsystem_kernel.dylib 0x00007fff6afbb33a __pthread_kill + 10
1 libsystem_pthread.dylib 0x00007fff6b077e60 pthread_kill + 430
2 libsystem_c.dylib 0x00007fff6aed293e raise + 26
3 libsystem_platform.dylib 0x00007fff6b06c5fd _sigtramp + 29
4 ??? 000000000000000000 0 + 0
5 com.apple.CoreFoundation 0x00007fff30dd39d5 __CFRunLoopServiceMachPort + 247
6 com.apple.CoreFoundation 0x00007fff30dd24a2 __CFRunLoopRun + 1319
7 com.apple.CoreFoundation 0x00007fff30dd191e CFRunLoopRunSpecific + 462
8 com.apple.HIToolbox 0x00007fff2f9fdabd RunCurrentEventLoopInMode + 292
9 com.apple.HIToolbox 0x00007fff2f9fd7d5 ReceiveNextEventCommon + 584
10 com.apple.HIToolbox 0x00007fff2f9fd579 _BlockUntilNextEventMatchingListInModeWithFilter + 64
11 com.apple.AppKit 0x00007fff2e044039 _DPSNextEvent + 883
12 com.apple.AppKit 0x00007fff2e042880 -[NSApplication(NSEvent) _nextEventMatchingEventMask:untilDate:inMode:dequeue:] + 1352
13 com.apple.AppKit 0x00007fff2e03458e -[NSApplication run] + 658
14 libqcocoa.dylib 0x000000012ef2b62f QCocoaEventDispatcher::processEvents(QFlags) + 2495
15 QtCore 0x00000001105e3acf QEventLoop::exec(QFlags) + 431
16 QtCore 0x00000001105e8042 QCoreApplication::exec() + 130
17 QtWidgets.abi3.so 0x0000000110d53702 meth_QApplication_exec_(_object*, _object*) + 82
18 org.python.python 0x0000000106f6245d cfunction_call + 125
19 org.python.python 0x0000000106f234ed _PyObject_MakeTpCall + 365
20 org.python.python 0x0000000106ff9ecc call_function + 876
21 org.python.python 0x0000000106ff7363 _PyEval_EvalFrameDefault + 25219
22 org.python.python 0x0000000106f23cb8 function_code_fastcall + 104
23 org.python.python 0x0000000106f25cfa method_vectorcall + 202
24 org.python.python 0x0000000106ff9e3c call_function + 732
25 org.python.python 0x0000000106ff7363 _PyEval_EvalFrameDefault + 25219
26 org.python.python 0x0000000106ffab33 _PyEval_EvalCode + 2611
27 org.python.python 0x0000000106f23c41 _PyFunction_Vectorcall + 289
28 org.python.python 0x0000000106ff9e3c call_function + 732
29 org.python.python 0x0000000106ff73fb _PyEval_EvalFrameDefault + 25371
30 org.python.python 0x0000000106ffab33 _PyEval_EvalCode + 2611
31 org.python.python 0x0000000106ff0fbb PyEval_EvalCode + 139
32 org.python.python 0x0000000106fede42 builtin_exec + 626
33 org.python.python 0x0000000106f61c5a cfunction_vectorcall_FASTCALL + 218
34 org.python.python 0x0000000106ff9e3c call_function + 732
35 org.python.python 0x0000000106ff73fb _PyEval_EvalFrameDefault + 25371
36 org.python.python 0x0000000106ffab33 _PyEval_EvalCode + 2611
37 org.python.python 0x0000000106f23c41 _PyFunction_Vectorcall + 289
38 org.python.python 0x0000000106ff9e3c call_function + 732
39 org.python.python 0x0000000106ff73fb _PyEval_EvalFrameDefault + 25371
40 org.python.python 0x0000000106ffab33 _PyEval_EvalCode + 2611
41 org.python.python 0x0000000106f23c41 _PyFunction_Vectorcall + 289
42 org.python.python 0x00000001070606b0 pymain_run_module + 208
43 org.python.python 0x000000010705fdc7 Py_RunMain + 1431
44 org.python.python 0x00000001070603cf pymain_main + 223
45 org.python.python 0x00000001070602db Py_Main + 43
46 edu.ucsf.cgl.ChimeraX 0x0000000106ed3d79 main + 121
47 libdyld.dylib 0x00007fff6ae73cc9 start + 1
Thread 1:: ThreadPoolServiceThread
0 libsystem_kernel.dylib 0x00007fff6afbdb96 kevent64 + 10
1 QtWebEngineCore 0x0000000124b34e6a base::MessagePumpKqueue::DoInternalWork(base::MessagePump::Delegate::NextWorkInfo*) + 330
2 QtWebEngineCore 0x0000000124b34cc7 base::MessagePumpKqueue::Run(base::MessagePump::Delegate*) + 167
3 QtWebEngineCore 0x0000000124abd62b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
4 QtWebEngineCore 0x0000000124a817cb base::RunLoop::Run() + 395
5 QtWebEngineCore 0x0000000124ac8a94 base::internal::ServiceThread::Run(base::RunLoop*) + 20
6 QtWebEngineCore 0x0000000124adca7d base::Thread::ThreadMain() + 413
7 QtWebEngineCore 0x0000000124b25e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
8 libsystem_pthread.dylib 0x00007fff6b078109 _pthread_start + 148
9 libsystem_pthread.dylib 0x00007fff6b073b8b thread_start + 15
Thread 2:: ThreadPoolBackgroundWorker
0 libsystem_kernel.dylib 0x00007fff6afb4dfa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff6afb5170 mach_msg + 60
2 QtWebEngineCore 0x0000000124b2a492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x0000000124ad2778 base::internal::WorkerThread::Delegate::WaitForWork(base::WaitableEvent*) + 56
4 QtWebEngineCore 0x0000000124ad3150 base::internal::WorkerThread::RunWorker() + 1024
5 QtWebEngineCore 0x0000000124ad2c44 base::internal::WorkerThread::RunBackgroundPooledWorker() + 20
6 QtWebEngineCore 0x0000000124b25e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
7 libsystem_pthread.dylib 0x00007fff6b078109 _pthread_start + 148
8 libsystem_pthread.dylib 0x00007fff6b073b8b thread_start + 15
Thread 3:: Chrome_IOThread
0 libsystem_kernel.dylib 0x00007fff6afbdb96 kevent64 + 10
1 QtWebEngineCore 0x0000000124b34e6a base::MessagePumpKqueue::DoInternalWork(base::MessagePump::Delegate::NextWorkInfo*) + 330
2 QtWebEngineCore 0x0000000124b34cc7 base::MessagePumpKqueue::Run(base::MessagePump::Delegate*) + 167
3 QtWebEngineCore 0x0000000124abd62b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
4 QtWebEngineCore 0x0000000124a817cb base::RunLoop::Run() + 395
5 QtWebEngineCore 0x0000000128a01f06 content::BrowserProcessSubThread::IOThreadRun(base::RunLoop*) + 102
6 QtWebEngineCore 0x0000000124adca7d base::Thread::ThreadMain() + 413
7 QtWebEngineCore 0x0000000124b25e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
8 libsystem_pthread.dylib 0x00007fff6b078109 _pthread_start + 148
9 libsystem_pthread.dylib 0x00007fff6b073b8b thread_start + 15
Thread 4:: NetworkConfigWatcher
0 libsystem_kernel.dylib 0x00007fff6afb4dfa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff6afb5170 mach_msg + 60
2 QtWebEngineCore 0x0000000124b2a492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x0000000124b2a2cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x0000000124a521db base::MessagePumpDefault::Run(base::MessagePump::Delegate*) + 171
5 QtWebEngineCore 0x0000000124abd62b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
6 QtWebEngineCore 0x0000000124a817cb base::RunLoop::Run() + 395
7 QtWebEngineCore 0x0000000124adca7d base::Thread::ThreadMain() + 413
8 QtWebEngineCore 0x0000000124b25e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
9 libsystem_pthread.dylib 0x00007fff6b078109 _pthread_start + 148
10 libsystem_pthread.dylib 0x00007fff6b073b8b thread_start + 15
Thread 5:: ThreadPoolForegroundWorker
0 libsystem_kernel.dylib 0x00007fff6afb4dfa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff6afb5170 mach_msg + 60
2 QtWebEngineCore 0x0000000124b2a492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x0000000124ad2778 base::internal::WorkerThread::Delegate::WaitForWork(base::WaitableEvent*) + 56
4 QtWebEngineCore 0x0000000124ad3150 base::internal::WorkerThread::RunWorker() + 1024
5 QtWebEngineCore 0x0000000124ad2cd4 base::internal::WorkerThread::RunPooledWorker() + 20
6 QtWebEngineCore 0x0000000124b25e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
7 libsystem_pthread.dylib 0x00007fff6b078109 _pthread_start + 148
8 libsystem_pthread.dylib 0x00007fff6b073b8b thread_start + 15
Thread 6:: CompositorTileWorker1
0 libsystem_kernel.dylib 0x00007fff6afb7882 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff6b078425 _pthread_cond_wait + 698
2 QtWebEngineCore 0x0000000124b21e18 base::ConditionVariable::Wait() + 104
3 QtWebEngineCore 0x0000000125dd95f8 non-virtual thunk to cc::SingleThreadTaskGraphRunner::Run() + 56
4 QtWebEngineCore 0x0000000124b25e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
5 libsystem_pthread.dylib 0x00007fff6b078109 _pthread_start + 148
6 libsystem_pthread.dylib 0x00007fff6b073b8b thread_start + 15
Thread 7:: Chrome_InProcGpuThread
0 libsystem_kernel.dylib 0x00007fff6afb4dfa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff6afb5170 mach_msg + 60
2 QtWebEngineCore 0x0000000124b2a492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x0000000124a5220f base::MessagePumpDefault::Run(base::MessagePump::Delegate*) + 223
4 QtWebEngineCore 0x0000000124abd62b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
5 QtWebEngineCore 0x0000000124a817cb base::RunLoop::Run() + 395
6 QtWebEngineCore 0x0000000124adca7d base::Thread::ThreadMain() + 413
7 QtWebEngineCore 0x0000000124b25e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
8 libsystem_pthread.dylib 0x00007fff6b078109 _pthread_start + 148
9 libsystem_pthread.dylib 0x00007fff6b073b8b thread_start + 15
Thread 8:: Chrome_ChildIOThread
0 libsystem_kernel.dylib 0x00007fff6afbdb96 kevent64 + 10
1 QtWebEngineCore 0x0000000124b34e6a base::MessagePumpKqueue::DoInternalWork(base::MessagePump::Delegate::NextWorkInfo*) + 330
2 QtWebEngineCore 0x0000000124b34cc7 base::MessagePumpKqueue::Run(base::MessagePump::Delegate*) + 167
3 QtWebEngineCore 0x0000000124abd62b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
4 QtWebEngineCore 0x0000000124a817cb base::RunLoop::Run() + 395
5 QtWebEngineCore 0x0000000124adca7d base::Thread::ThreadMain() + 413
6 QtWebEngineCore 0x0000000124b25e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
7 libsystem_pthread.dylib 0x00007fff6b078109 _pthread_start + 148
8 libsystem_pthread.dylib 0x00007fff6b073b8b thread_start + 15
Thread 9:: NetworkConfigWatcher
0 libsystem_kernel.dylib 0x00007fff6afb4dfa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff6afb5170 mach_msg + 60
2 QtWebEngineCore 0x0000000124b2a492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x0000000124b2a2cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x0000000124a521db base::MessagePumpDefault::Run(base::MessagePump::Delegate*) + 171
5 QtWebEngineCore 0x0000000124abd62b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
6 QtWebEngineCore 0x0000000124a817cb base::RunLoop::Run() + 395
7 QtWebEngineCore 0x0000000124adca7d base::Thread::ThreadMain() + 413
8 QtWebEngineCore 0x0000000124b25e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
9 libsystem_pthread.dylib 0x00007fff6b078109 _pthread_start + 148
10 libsystem_pthread.dylib 0x00007fff6b073b8b thread_start + 15
Thread 10:: VizCompositorThread
0 libsystem_kernel.dylib 0x00007fff6afb4dfa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff6afb5170 mach_msg + 60
2 QtWebEngineCore 0x0000000124b2a492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x0000000124b2a2cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x0000000124a521db base::MessagePumpDefault::Run(base::MessagePump::Delegate*) + 171
5 QtWebEngineCore 0x0000000124abd62b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
6 QtWebEngineCore 0x0000000124a817cb base::RunLoop::Run() + 395
7 QtWebEngineCore 0x0000000124adca7d base::Thread::ThreadMain() + 413
8 QtWebEngineCore 0x0000000124b25e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
9 libsystem_pthread.dylib 0x00007fff6b078109 _pthread_start + 148
10 libsystem_pthread.dylib 0x00007fff6b073b8b thread_start + 15
Thread 11:: NetworkConfigWatcher
0 libsystem_kernel.dylib 0x00007fff6afb4dfa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff6afb5170 mach_msg + 60
2 QtWebEngineCore 0x0000000124b2a492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x0000000124b2a2cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x0000000124a521db base::MessagePumpDefault::Run(base::MessagePump::Delegate*) + 171
5 QtWebEngineCore 0x0000000124abd62b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
6 QtWebEngineCore 0x0000000124a817cb base::RunLoop::Run() + 395
7 QtWebEngineCore 0x0000000124adca7d base::Thread::ThreadMain() + 413
8 QtWebEngineCore 0x0000000124b25e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
9 libsystem_pthread.dylib 0x00007fff6b078109 _pthread_start + 148
10 libsystem_pthread.dylib 0x00007fff6b073b8b thread_start + 15
Thread 12:: ThreadPoolSingleThreadForegroundBlocking0
0 libsystem_kernel.dylib 0x00007fff6afb4dfa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff6afb5170 mach_msg + 60
2 QtWebEngineCore 0x0000000124b2a492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x0000000124b2a2cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x0000000124ad276a base::internal::WorkerThread::Delegate::WaitForWork(base::WaitableEvent*) + 42
5 QtWebEngineCore 0x0000000124ad3150 base::internal::WorkerThread::RunWorker() + 1024
6 QtWebEngineCore 0x0000000124ad2d34 base::internal::WorkerThread::RunDedicatedWorker() + 20
7 QtWebEngineCore 0x0000000124b25e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
8 libsystem_pthread.dylib 0x00007fff6b078109 _pthread_start + 148
9 libsystem_pthread.dylib 0x00007fff6b073b8b thread_start + 15
Thread 13:: MemoryInfra
0 libsystem_kernel.dylib 0x00007fff6afb4dfa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff6afb5170 mach_msg + 60
2 QtWebEngineCore 0x0000000124b2a492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x0000000124b2a2cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x0000000124a521db base::MessagePumpDefault::Run(base::MessagePump::Delegate*) + 171
5 QtWebEngineCore 0x0000000124abd62b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
6 QtWebEngineCore 0x0000000124a817cb base::RunLoop::Run() + 395
7 QtWebEngineCore 0x0000000124adca7d base::Thread::ThreadMain() + 413
8 QtWebEngineCore 0x0000000124b25e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
9 libsystem_pthread.dylib 0x00007fff6b078109 _pthread_start + 148
10 libsystem_pthread.dylib 0x00007fff6b073b8b thread_start + 15
Thread 14:: NetworkConfigWatcher
0 libsystem_kernel.dylib 0x00007fff6afb4dfa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff6afb5170 mach_msg + 60
2 QtWebEngineCore 0x0000000124b2a492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x0000000124b2a2cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x0000000124a521db base::MessagePumpDefault::Run(base::MessagePump::Delegate*) + 171
5 QtWebEngineCore 0x0000000124abd62b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
6 QtWebEngineCore 0x0000000124a817cb base::RunLoop::Run() + 395
7 QtWebEngineCore 0x0000000124adca7d base::Thread::ThreadMain() + 413
8 QtWebEngineCore 0x0000000124b25e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
9 libsystem_pthread.dylib 0x00007fff6b078109 _pthread_start + 148
10 libsystem_pthread.dylib 0x00007fff6b073b8b thread_start + 15
Thread 15:: com.apple.NSEventThread
0 libsystem_kernel.dylib 0x00007fff6afb4dfa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff6afb5170 mach_msg + 60
2 com.apple.CoreFoundation 0x00007fff30dd39d5 __CFRunLoopServiceMachPort + 247
3 com.apple.CoreFoundation 0x00007fff30dd24a2 __CFRunLoopRun + 1319
4 com.apple.CoreFoundation 0x00007fff30dd191e CFRunLoopRunSpecific + 462
5 com.apple.AppKit 0x00007fff2e1e5954 _NSEventThread + 132
6 libsystem_pthread.dylib 0x00007fff6b078109 _pthread_start + 148
7 libsystem_pthread.dylib 0x00007fff6b073b8b thread_start + 15
Thread 16:: ThreadPoolSingleThreadSharedBackgroundBlocking1
0 libsystem_kernel.dylib 0x00007fff6afb4dfa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff6afb5170 mach_msg + 60
2 QtWebEngineCore 0x0000000124b2a492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x0000000124b2a2cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x0000000124ad276a base::internal::WorkerThread::Delegate::WaitForWork(base::WaitableEvent*) + 42
5 QtWebEngineCore 0x0000000124ad2e3d base::internal::WorkerThread::RunWorker() + 237
6 QtWebEngineCore 0x0000000124ad2c74 base::internal::WorkerThread::RunBackgroundSharedWorker() + 20
7 QtWebEngineCore 0x0000000124b25e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
8 libsystem_pthread.dylib 0x00007fff6b078109 _pthread_start + 148
9 libsystem_pthread.dylib 0x00007fff6b073b8b thread_start + 15
Thread 17:: ThreadPoolForegroundWorker
0 libsystem_kernel.dylib 0x00007fff6afb4dfa mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff6afb5170 mach_msg + 60
2 QtWebEngineCore 0x0000000124b2a492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x0000000124ad2778 base::internal::WorkerThread::Delegate::WaitForWork(base::WaitableEvent*) + 56
4 QtWebEngineCore 0x0000000124ad3150 base::internal::WorkerThread::RunWorker() + 1024
5 QtWebEngineCore 0x0000000124ad2cd4 base::internal::WorkerThread::RunPooledWorker() + 20
6 QtWebEngineCore 0x0000000124b25e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
7 libsystem_pthread.dylib 0x00007fff6b078109 _pthread_start + 148
8 libsystem_pthread.dylib 0x00007fff6b073b8b thread_start + 15
Thread 18:
0 libsystem_kernel.dylib 0x00007fff6afb7882 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff6b078425 _pthread_cond_wait + 698
2 libopenblas.0.dylib 0x000000010804e21f blas_thread_server + 207
3 libsystem_pthread.dylib 0x00007fff6b078109 _pthread_start + 148
4 libsystem_pthread.dylib 0x00007fff6b073b8b thread_start + 15
Thread 19:
0 libsystem_kernel.dylib 0x00007fff6afb7882 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff6b078425 _pthread_cond_wait + 698
2 libopenblas.0.dylib 0x000000010804e21f blas_thread_server + 207
3 libsystem_pthread.dylib 0x00007fff6b078109 _pthread_start + 148
4 libsystem_pthread.dylib 0x00007fff6b073b8b thread_start + 15
Thread 20:
0 libsystem_kernel.dylib 0x00007fff6afb7882 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff6b078425 _pthread_cond_wait + 698
2 libopenblas.0.dylib 0x000000010804e21f blas_thread_server + 207
3 libsystem_pthread.dylib 0x00007fff6b078109 _pthread_start + 148
4 libsystem_pthread.dylib 0x00007fff6b073b8b thread_start + 15
Thread 21:
0 libsystem_kernel.dylib 0x00007fff6afb7882 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff6b078425 _pthread_cond_wait + 698
2 libopenblas.0.dylib 0x000000010804e21f blas_thread_server + 207
3 libsystem_pthread.dylib 0x00007fff6b078109 _pthread_start + 148
4 libsystem_pthread.dylib 0x00007fff6b073b8b thread_start + 15
Thread 22:
0 libsystem_kernel.dylib 0x00007fff6afb7882 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff6b078425 _pthread_cond_wait + 698
2 libopenblas.0.dylib 0x000000010804e21f blas_thread_server + 207
3 libsystem_pthread.dylib 0x00007fff6b078109 _pthread_start + 148
4 libsystem_pthread.dylib 0x00007fff6b073b8b thread_start + 15
Thread 23:
0 libsystem_kernel.dylib 0x00007fff6afb7882 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff6b078425 _pthread_cond_wait + 698
2 libopenblas.0.dylib 0x000000010804e21f blas_thread_server + 207
3 libsystem_pthread.dylib 0x00007fff6b078109 _pthread_start + 148
4 libsystem_pthread.dylib 0x00007fff6b073b8b thread_start + 15
Thread 24:
0 libsystem_kernel.dylib 0x00007fff6afb7882 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff6b078425 _pthread_cond_wait + 698
2 libopenblas.0.dylib 0x000000010804e21f blas_thread_server + 207
3 libsystem_pthread.dylib 0x00007fff6b078109 _pthread_start + 148
4 libsystem_pthread.dylib 0x00007fff6b073b8b thread_start + 15
Thread 25:
0 libsystem_pthread.dylib 0x00007fff6b073b68 start_wqthread + 0
Thread 0 crashed with X86 Thread State (64-bit):
rax: 0x0000000000000000 rbx: 0x000000011168fdc0 rcx: 0x00007ff3b8047a58 rdx: 0x0000000000000000
rdi: 0x0000000000000307 rsi: 0x0000000000000006 rbp: 0x00007ff3b8047a80 rsp: 0x00007ff3b8047a58
r8: 0x00007ff3b8047f48 r9: 0xc6409768738355f7 r10: 0x000000011168fdc0 r11: 0x0000000000000246
r12: 0x0000000000000307 r13: 0x0000000000000c00 r14: 0x0000000000000006 r15: 0x0000000000000016
rip: 0x00007fff6afbb33a rfl: 0x0000000000000246 cr2: 0x00007ff3a807a0e0
Logical CPU: 0
Error Code: 0x02000148
Trap Number: 133
Binary Images:
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0x7fff6a272000 - 0x7fff6a27fff7 libxar.1.dylib (425.2) /usr/lib/libxar.1.dylib
0x7fff6a285000 - 0x7fff6a367fff libxml2.2.dylib (33.8) /usr/lib/libxml2.2.dylib
0x7fff6a36b000 - 0x7fff6a393fff libxslt.1.dylib (16.11) /usr/lib/libxslt.1.dylib
0x7fff6a394000 - 0x7fff6a3a6ff3 libz.1.dylib (76) /usr/lib/libz.1.dylib
0x7fff6ac55000 - 0x7fff6ac5aff3 libcache.dylib (83) /usr/lib/system/libcache.dylib
0x7fff6ac5b000 - 0x7fff6ac66fff libcommonCrypto.dylib (60165.120.1) /usr/lib/system/libcommonCrypto.dylib
0x7fff6ac67000 - 0x7fff6ac6efff libcompiler_rt.dylib (101.2) /usr/lib/system/libcompiler_rt.dylib
0x7fff6ac6f000 - 0x7fff6ac78ff7 libcopyfile.dylib (166.40.1) /usr/lib/system/libcopyfile.dylib
0x7fff6ac79000 - 0x7fff6ad0bfdb libcorecrypto.dylib (866.140.2) /usr/lib/system/libcorecrypto.dylib
0x7fff6ae18000 - 0x7fff6ae58ff0 libdispatch.dylib (1173.100.2) /usr/lib/system/libdispatch.dylib
0x7fff6ae59000 - 0x7fff6ae8ffff libdyld.dylib (750.6) /usr/lib/system/libdyld.dylib
0x7fff6ae90000 - 0x7fff6ae90ffb libkeymgr.dylib (30) /usr/lib/system/libkeymgr.dylib
0x7fff6ae91000 - 0x7fff6ae9dff3 libkxld.dylib (6153.141.28.1) /usr/lib/system/libkxld.dylib
0x7fff6ae9e000 - 0x7fff6ae9eff7 liblaunch.dylib (1738.140.3) /usr/lib/system/liblaunch.dylib
0x7fff6ae9f000 - 0x7fff6aea4ff7 libmacho.dylib (959.0.1) /usr/lib/system/libmacho.dylib
0x7fff6aea5000 - 0x7fff6aea7ff3 libquarantine.dylib (110.40.3) /usr/lib/system/libquarantine.dylib
0x7fff6aea8000 - 0x7fff6aea9ff7 libremovefile.dylib (48) /usr/lib/system/libremovefile.dylib
0x7fff6aeaa000 - 0x7fff6aec1ff3 libsystem_asl.dylib (377.60.2) /usr/lib/system/libsystem_asl.dylib
0x7fff6aec2000 - 0x7fff6aec2ff7 libsystem_blocks.dylib (74) /usr/lib/system/libsystem_blocks.dylib
0x7fff6aec3000 - 0x7fff6af4afff libsystem_c.dylib (1353.100.2) /usr/lib/system/libsystem_c.dylib
0x7fff6af4b000 - 0x7fff6af4effb libsystem_configuration.dylib (1061.141.1) /usr/lib/system/libsystem_configuration.dylib
0x7fff6af4f000 - 0x7fff6af52fff libsystem_coreservices.dylib (114) /usr/lib/system/libsystem_coreservices.dylib
0x7fff6af53000 - 0x7fff6af5bfff libsystem_darwin.dylib (1353.100.2) /usr/lib/system/libsystem_darwin.dylib
0x7fff6af5c000 - 0x7fff6af63fff libsystem_dnssd.dylib (1096.100.3) /usr/lib/system/libsystem_dnssd.dylib
0x7fff6af64000 - 0x7fff6af65ffb libsystem_featureflags.dylib (17) /usr/lib/system/libsystem_featureflags.dylib
0x7fff6af66000 - 0x7fff6afb3ff7 libsystem_info.dylib (538) /usr/lib/system/libsystem_info.dylib
0x7fff6afb4000 - 0x7fff6afe0ff7 libsystem_kernel.dylib (6153.141.28.1) /usr/lib/system/libsystem_kernel.dylib
0x7fff6afe1000 - 0x7fff6b028fff libsystem_m.dylib (3178) /usr/lib/system/libsystem_m.dylib
0x7fff6b029000 - 0x7fff6b050fff libsystem_malloc.dylib (283.100.6) /usr/lib/system/libsystem_malloc.dylib
0x7fff6b051000 - 0x7fff6b05effb libsystem_networkextension.dylib (1095.140.2) /usr/lib/system/libsystem_networkextension.dylib
0x7fff6b05f000 - 0x7fff6b068ff7 libsystem_notify.dylib (241.100.2) /usr/lib/system/libsystem_notify.dylib
0x7fff6b069000 - 0x7fff6b071fef libsystem_platform.dylib (220.100.1) /usr/lib/system/libsystem_platform.dylib
0x7fff6b072000 - 0x7fff6b07cfff libsystem_pthread.dylib (416.100.3) /usr/lib/system/libsystem_pthread.dylib
0x7fff6b07d000 - 0x7fff6b081ff3 libsystem_sandbox.dylib (1217.141.2) /usr/lib/system/libsystem_sandbox.dylib
0x7fff6b082000 - 0x7fff6b084fff libsystem_secinit.dylib (62.100.2) /usr/lib/system/libsystem_secinit.dylib
0x7fff6b085000 - 0x7fff6b08cffb libsystem_symptoms.dylib (1238.120.2) /usr/lib/system/libsystem_symptoms.dylib
0x7fff6b08d000 - 0x7fff6b0a3ff2 libsystem_trace.dylib (1147.120.1) /usr/lib/system/libsystem_trace.dylib
0x7fff6b0a5000 - 0x7fff6b0aaff7 libunwind.dylib (35.4) /usr/lib/system/libunwind.dylib
0x7fff6b0ab000 - 0x7fff6b0e0ffe libxpc.dylib (1738.140.3) /usr/lib/system/libxpc.dylib
External Modification Summary:
Calls made by other processes targeting this process:
task_for_pid: 2
thread_create: 0
thread_set_state: 0
Calls made by this process:
task_for_pid: 0
thread_create: 0
thread_set_state: 0
Calls made by all processes on this machine:
task_for_pid: 5508911
thread_create: 0
thread_set_state: 0
VM Region Summary:
ReadOnly portion of Libraries: Total=1.0G resident=0K(0%) swapped_out_or_unallocated=1.0G(100%)
Writable regions: Total=2.7G written=0K(0%) resident=0K(0%) swapped_out=0K(0%) unallocated=2.7G(100%)
VIRTUAL REGION
REGION TYPE SIZE COUNT (non-coalesced)
=========== ======= =======
Accelerate framework 256K 2
Activity Tracing 256K 1
CG backing stores 1160K 2
CG image 204K 14
CoreAnimation 140K 16
CoreGraphics 8K 1
CoreImage 24K 2
CoreUI image data 2876K 25
Dispatch continuations 32.0M 1
Foundation 4K 1
Kernel Alloc Once 8K 1
MALLOC 1.1G 147
MALLOC guard page 48K 9
MALLOC_MEDIUM (reserved) 1.0G 10 reserved VM address space (unallocated)
Mach message 32K 3
OpenGL GLSL 384K 4
STACK GUARD 100K 25
Stack 167.2M 26
Stack Guard 54.4M 1
VM_ALLOCATE 172.4M 124
VM_ALLOCATE (reserved) 128.0M 1 reserved VM address space (unallocated)
__DATA 66.5M 544
__DATA_CONST 372K 21
__FONT_DATA 4K 1
__GLSLBUILTINS 5176K 1
__LINKEDIT 476.8M 174
__OBJC_RO 32.3M 1
__OBJC_RW 1908K 2
__TEXT 573.9M 508
__UNICODE 564K 1
mapped file 398.3M 51
shared memory 2972K 28
=========== ======= =======
TOTAL 4.2G 1748
TOTAL, minus reserved VM space 3.1G 1748
===== Log before crash start =====
UCSF ChimeraX version: 1.3.dev202105180049 (2021-05-18)
© 2016-2021 Regents of the University of California. All rights reserved.
How to cite UCSF ChimeraX
> open
> /Users/goddard/ucsf/data/emdb_segmentations/emd_11992/EMD-11992/emd_11992.cxs
> format session
Opened emd_11992_msk_1.map as #1, grid size 928,928,500, pixel 16.8,16.8,16.8,
shown at level 0.3, step 2, values float32
Opened emd_11992_msk_2.map as #2, grid size 928,928,500, pixel 16.8,16.8,16.8,
shown at level 0.3, step 2, values float32
Opened emd_11992_msk_3.map as #3, grid size 928,928,500, pixel 16.8,16.8,16.8,
shown at level 0.3, step 2, values float32
Opened emd_11992_msk_4.map as #4, grid size 928,928,500, pixel 16.8,16.8,16.8,
shown at level 254, step 2, values int16
Opened emd_11992_msk_5.map as #5, grid size 928,928,500, pixel 16.8,16.8,16.8,
shown at level 0.1, step 2, values float32
Opened emd_11992_msk_6.map as #6, grid size 928,928,500, pixel 16.8,16.8,16.8,
shown at level 0.5, step 2, values float32
Opened emd_11992_msk_7.map as #7, grid size 928,928,500, pixel 16.8,16.8,16.8,
shown at level 0.1, step 2, values float32
Opened emd_11992.map as #8, grid size 928,928,500, pixel 16.8,16.8,16.8, shown
at step 1, values float32
opened ChimeraX session
===== Log before crash end =====
Log:
UCSF ChimeraX version: 1.3.dev202105180049 (2021-05-18)
© 2016-2021 Regents of the University of California. All rights reserved.
How to cite UCSF ChimeraX
> open 11047 format ccp4 fromDatabase emdb
Opened emdb 11047 as #1, grid size 200,200,200, pixel 3.42, shown at level
0.36, step 1, values float32
Failed to send bug report. Possibly no internet connection.
OpenGL version: 4.1 ATI-3.10.19
OpenGL renderer: AMD Radeon Pro Vega 20 OpenGL Engine
OpenGL vendor: ATI Technologies Inc.Hardware:
Hardware Overview:
Model Name: MacBook Pro
Model Identifier: MacBookPro15,3
Processor Name: 8-Core Intel Core i9
Processor Speed: 2.4 GHz
Number of Processors: 1
Total Number of Cores: 8
L2 Cache (per Core): 256 KB
L3 Cache: 16 MB
Hyper-Threading Technology: Enabled
Memory: 32 GB
Boot ROM Version: 1554.100.64.0.0 (iBridge: 18.16.14556.0.0,0)
Software:
System Software Overview:
System Version: macOS 10.15.7 (19H1030)
Kernel Version: Darwin 19.6.0
Time since boot: 41 days 22:40
Graphics/Displays:
Intel UHD Graphics 630:
Chipset Model: Intel UHD Graphics 630
Type: GPU
Bus: Built-In
VRAM (Dynamic, Max): 1536 MB
Vendor: Intel
Device ID: 0x3e9b
Revision ID: 0x0002
Automatic Graphics Switching: Supported
gMux Version: 5.0.0
Metal: Supported, feature set macOS GPUFamily2 v1
Radeon Pro Vega 20:
Chipset Model: Radeon Pro Vega 20
Type: GPU
Bus: PCIe
PCIe Lane Width: x8
VRAM (Total): 4 GB
Vendor: AMD (0x1002)
Device ID: 0x69af
Revision ID: 0x00c0
ROM Revision: 113-D2060I-087
VBIOS Version: 113-D20601MA0T-016
Option ROM Version: 113-D20601MA0T-016
EFI Driver Version: 01.01.087
Automatic Graphics Switching: Supported
gMux Version: 5.0.0
Metal: Supported, feature set macOS GPUFamily2 v1
Displays:
Color LCD:
Display Type: Built-In Retina LCD
Resolution: 2880 x 1800 Retina
Framebuffer Depth: 24-Bit Color (ARGB8888)
Main Display: Yes
Mirror: Off
Online: Yes
Automatically Adjust Brightness: No
Connection Type: Internal
Locale: ('en_US', 'UTF-8')
PyQt5 5.15.2, Qt 5.15.2
Installed Packages:
alabaster: 0.7.12
appdirs: 1.4.4
appnope: 0.1.2
Babel: 2.9.1
backcall: 0.2.0
blockdiag: 2.0.1
certifi: 2020.12.5
cftime: 1.4.1
chardet: 4.0.0
ChimeraX-AddCharge: 1.1.3
ChimeraX-AddH: 2.1.6
ChimeraX-AlignmentAlgorithms: 2.0
ChimeraX-AlignmentHdrs: 3.2
ChimeraX-AlignmentMatrices: 2.0
ChimeraX-Alignments: 2.1
ChimeraX-AmberInfo: 1.0
ChimeraX-Arrays: 1.0
ChimeraX-Atomic: 1.25.1
ChimeraX-AtomicLibrary: 3.3
ChimeraX-AtomSearch: 2.0
ChimeraX-AtomSearchLibrary: 1.0
ChimeraX-AxesPlanes: 2.0
ChimeraX-BasicActions: 1.1
ChimeraX-BILD: 1.0
ChimeraX-BlastProtein: 1.1.1
ChimeraX-BondRot: 2.0
ChimeraX-BugReporter: 1.0
ChimeraX-BuildStructure: 2.5.2
ChimeraX-Bumps: 1.0
ChimeraX-BundleBuilder: 1.1
ChimeraX-ButtonPanel: 1.0
ChimeraX-CageBuilder: 1.0
ChimeraX-CellPack: 1.0
ChimeraX-Centroids: 1.1
ChimeraX-ChemGroup: 2.0
ChimeraX-Clashes: 2.1
ChimeraX-ColorActions: 1.0
ChimeraX-ColorGlobe: 1.0
ChimeraX-ColorKey: 1.3
ChimeraX-CommandLine: 1.1.4
ChimeraX-ConnectStructure: 2.0
ChimeraX-Contacts: 1.0
ChimeraX-Core: 1.3.dev202105180049
ChimeraX-CoreFormats: 1.0
ChimeraX-coulombic: 1.3
ChimeraX-Crosslinks: 1.0
ChimeraX-Crystal: 1.0
ChimeraX-CrystalContacts: 1.0
ChimeraX-DataFormats: 1.1
ChimeraX-DeepSSETracer: 0.1
ChimeraX-Dicom: 1.0
ChimeraX-DistMonitor: 1.1.3
ChimeraX-DistUI: 1.0
ChimeraX-Dssp: 2.0
ChimeraX-EMDB-SFF: 1.0
ChimeraX-ExperimentalCommands: 1.0
ChimeraX-FileHistory: 1.0
ChimeraX-FunctionKey: 1.0
ChimeraX-Geometry: 1.1
ChimeraX-gltf: 1.0
ChimeraX-Graphics: 1.1
ChimeraX-Hbonds: 2.1
ChimeraX-Help: 1.1
ChimeraX-HKCage: 1.3
ChimeraX-IHM: 1.1
ChimeraX-ImageFormats: 1.1
ChimeraX-IMOD: 1.0
ChimeraX-IO: 1.0.1
ChimeraX-ItemsInspection: 1.0
ChimeraX-Label: 1.1
ChimeraX-ListInfo: 1.1.1
ChimeraX-Log: 1.1.4
ChimeraX-LookingGlass: 1.1
ChimeraX-Maestro: 1.8.1
ChimeraX-Map: 1.1
ChimeraX-MapData: 2.0
ChimeraX-MapEraser: 1.0
ChimeraX-MapFilter: 2.0
ChimeraX-MapFit: 2.0
ChimeraX-MapSeries: 2.1
ChimeraX-Markers: 1.0
ChimeraX-Mask: 1.0
ChimeraX-MatchMaker: 1.2.1
ChimeraX-MDcrds: 2.2
ChimeraX-MedicalToolbar: 1.0.1
ChimeraX-Meeting: 1.0
ChimeraX-MLP: 1.1
ChimeraX-mmCIF: 2.3
ChimeraX-MMTF: 2.1
ChimeraX-Modeller: 1.0.1
ChimeraX-ModelPanel: 1.1
ChimeraX-ModelSeries: 1.0
ChimeraX-Mol2: 2.0
ChimeraX-Morph: 1.0
ChimeraX-MouseModes: 1.1
ChimeraX-Movie: 1.0
ChimeraX-Neuron: 1.0
ChimeraX-Nucleotides: 2.0.1
ChimeraX-OpenCommand: 1.5
ChimeraX-PDB: 2.4.1
ChimeraX-PDBBio: 1.0
ChimeraX-PDBLibrary: 1.0.1
ChimeraX-PDBMatrices: 1.0
ChimeraX-PickBlobs: 1.0
ChimeraX-Positions: 1.0
ChimeraX-PresetMgr: 1.0.1
ChimeraX-PubChem: 2.0.1
ChimeraX-ReadPbonds: 1.0
ChimeraX-Registration: 1.1
ChimeraX-RemoteControl: 1.0
ChimeraX-ResidueFit: 1.0
ChimeraX-RestServer: 1.1
ChimeraX-RNALayout: 1.0
ChimeraX-RotamerLibMgr: 2.0
ChimeraX-RotamerLibsDunbrack: 2.0
ChimeraX-RotamerLibsDynameomics: 2.0
ChimeraX-RotamerLibsRichardson: 2.0
ChimeraX-SaveCommand: 1.4
ChimeraX-SchemeMgr: 1.0
ChimeraX-SDF: 2.0
ChimeraX-Segger: 1.0
ChimeraX-Segment: 1.0
ChimeraX-SelInspector: 1.0
ChimeraX-SeqView: 2.4
ChimeraX-Shape: 1.0.1
ChimeraX-Shell: 1.0
ChimeraX-Shortcuts: 1.1
ChimeraX-ShowAttr: 1.0
ChimeraX-ShowSequences: 1.0
ChimeraX-SideView: 1.0
ChimeraX-Smiles: 2.0.1
ChimeraX-SmoothLines: 1.0
ChimeraX-SpaceNavigator: 1.0
ChimeraX-StdCommands: 1.6
ChimeraX-STL: 1.0
ChimeraX-Storm: 1.0
ChimeraX-Struts: 1.0
ChimeraX-Surface: 1.0
ChimeraX-SwapAA: 2.0
ChimeraX-SwapRes: 2.1
ChimeraX-TapeMeasure: 1.0
ChimeraX-Test: 1.0
ChimeraX-Toolbar: 1.1
ChimeraX-ToolshedUtils: 1.2
ChimeraX-Tug: 1.0
ChimeraX-UI: 1.10
ChimeraX-uniprot: 2.1
ChimeraX-UnitCell: 1.0
ChimeraX-ViewDockX: 1.0
ChimeraX-Vive: 1.1
ChimeraX-VolumeMenu: 1.0
ChimeraX-VTK: 1.0
ChimeraX-WavefrontOBJ: 1.0
ChimeraX-WebCam: 1.0
ChimeraX-WebServices: 1.0
ChimeraX-Zone: 1.0
colorama: 0.4.4
comtypes: 1.1.10
cxservices: 1.0
cycler: 0.10.0
Cython: 0.29.23
decorator: 4.4.2
distlib: 0.3.1
docutils: 0.17.1
filelock: 3.0.12
funcparserlib: 0.3.6
grako: 3.16.5
h5py: 3.2.1
html2text: 2020.1.16
idna: 2.10
ihm: 0.20
imagecodecs: 2021.4.28
imagesize: 1.2.0
importlib-metadata: 4.0.1
ipykernel: 5.5.5
ipython: 7.23.1
ipython-genutils: 0.2.0
jedi: 0.18.0
Jinja2: 2.11.3
jupyter-client: 6.1.12
jupyter-core: 4.7.1
kiwisolver: 1.3.1
lxml: 4.6.3
lz4: 3.1.3
MarkupSafe: 1.1.1
matplotlib: 3.4.2
matplotlib-inline: 0.1.2
msgpack: 1.0.2
netCDF4: 1.5.6
networkx: 2.5.1
numpy: 1.20.3
numpydoc: 1.1.0
openvr: 1.16.801
packaging: 20.9
pandas: 1.2.4
ParmEd: 3.2.0
parso: 0.8.2
pexpect: 4.8.0
pickleshare: 0.7.5
Pillow: 8.2.0
pip: 21.1.1
pkginfo: 1.7.0
prompt-toolkit: 3.0.18
psutil: 5.8.0
ptyprocess: 0.7.0
pycollada: 0.7.1
pydicom: 2.1.2
Pygments: 2.9.0
PyOpenGL: 3.1.5
PyOpenGL-accelerate: 3.1.5
pyparsing: 2.4.7
PyQt5: 5.15.2
PyQt5-sip: 12.8.1
PyQtWebEngine: 5.15.2
python-dateutil: 2.8.1
pytz: 2021.1
pyzmq: 22.0.3
qtconsole: 5.1.0
QtPy: 1.9.0
RandomWords: 0.3.0
requests: 2.25.1
scipy: 1.6.3
setuptools: 56.2.0
sfftk-rw: 0.7.0.post1
six: 1.16.0
snowballstemmer: 2.1.0
sortedcontainers: 2.3.0
Sphinx: 4.0.1
sphinxcontrib-applehelp: 1.0.2
sphinxcontrib-blockdiag: 2.0.0
sphinxcontrib-devhelp: 1.0.2
sphinxcontrib-htmlhelp: 1.0.3
sphinxcontrib-jsmath: 1.0.1
sphinxcontrib-qthelp: 1.0.3
sphinxcontrib-serializinghtml: 1.1.4
suds-jurko: 0.6
tifffile: 2021.4.8
tinyarray: 1.2.3
torch: 1.8.1
tornado: 6.1
traitlets: 5.0.5
typing-extensions: 3.10.0.0
urllib3: 1.26.4
wcwidth: 0.2.5
webcolors: 1.11.1
wheel: 0.36.2
wheel-filename: 1.3.0
zipp: 3.4.1
Change History (2)
comment:1 by , 4 years ago
| Component: | Unassigned → Core |
|---|---|
| Owner: | set to |
| Platform: | → all |
| Project: | → ChimeraX |
| Status: | new → assigned |
| Summary: | ChimeraX bug report submission → Test of crash report including log |
| Type: | defect → enhancement |
comment:2 by , 4 years ago
| Resolution: | → worksforme |
|---|---|
| Status: | assigned → closed |
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