Opened 4 years ago
#4773 assigned enhancement
Make resfit show altlocs
Reported by: | Owned by: | Tom Goddard | |
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Priority: | moderate | Milestone: | |
Component: | Volume Data | Version: | |
Keywords: | Cc: | ||
Blocked By: | Blocking: | ||
Notify when closed: | Platform: | all | |
Project: | ChimeraX |
Description
From discussion on ChimeraX mailing list
https://www.rbvi.ucsf.edu/pipermail/chimerax-users/2021-June/002316.html
Begin forwarded message:
From: Wen-Jin Winston Wu via ChimeraX-users <chimerax-users@…>
Subject: [chimerax-users] dual conformation
Date: June 12, 2021 at 9:42:16 AM PDT
To: <chimerax-users@…>
Reply-To: Wen-Jin Winston Wu
Hi,
I am trying to use Chimera X to display an amino acid with dual side chain conformations (PDB code: 7a5v) together with its cryoEM density map (EMDataResource: EMD-11657).
For example, Tyr 66 have two side chain conformations, however using the command below, it only showed one conformation.
resfit /a:66 map #1 (a very nice command, by the way)
I then used Chimera 1.15 to view the PDB coordinate, and it showed two side chain conformations for Tyr66 (as I saw in PyMol); on the other hand, Chimera X only shows a single conformation.
Is there any way to display the two alternative conformations using Chimera X?
Thanks a lot for your time, and possible help!
Best wishes,
Winston