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#4623 closed defect (fixed)

ISOLDE: wrapped C/C++ object of type QLabel has been deleted

Reported by:	scsu15@…	Owned by:	Tristan Croll
Priority:	normal	Milestone:
Component:	Third Party	Version:
Keywords:		Cc:
Blocked By:		Blocking:
Notify when closed:		Platform:	all
Project:	ChimeraX

Description (last modified by pett)

The following bug report has been submitted:
Platform:        Windows-10-10.0.19041
ChimeraX Version: 1.1 (2020-09-09 22:22:27 UTC)
Description
(Describe the actions that caused this problem to occur here)

Log:
UCSF ChimeraX version: 1.1 (2020-09-09)  
© 2016-2020 Regents of the University of California. All rights reserved.  
How to cite UCSF ChimeraX  

> open F:\Chimera\m6a\HWV-J122-unmask-3A-2.mrc format mrc

Opened HWV-J122-unmask-3A-2.mrc, grid size 336,336,336, pixel 0.82, shown at
level 0.143, step 2, values float32  

> open F:\Chimera\m6a\HWV-J122-Initial_adp_rsr_Final.pdb format pdb

Chain information for HWV-J122-Initial_adp_rsr_Final.pdb #2  
---  
Chain | Description  
A | No description available  
C D | No description available  
  

> volume #1 step 1

> volume #1 level 0.36

> transparency 50

> volume #1 level 0.2788

> volume #1 level 0.1944

> volume #1 level 0.36

> open F:/Chimera/m6a/isolde.cxc

> clipper associate #1 toModel #2

Chain information for HWV-J122-Initial_adp_rsr_Final.pdb  
---  
Chain | Description  
1.2/A | No description available  
1.2/C 1.2/D | No description available  
  

> set bgColor white

> addh

Summary of feedback from adding hydrogens to
HWV-J122-Initial_adp_rsr_Final.pdb #1.2  
---  
notes | No usable SEQRES records for HWV-J122-Initial_adp_rsr_Final.pdb (#1.2)
chain A; guessing termini instead  
No usable SEQRES records for HWV-J122-Initial_adp_rsr_Final.pdb (#1.2) chain
C; guessing termini instead  
No usable SEQRES records for HWV-J122-Initial_adp_rsr_Final.pdb (#1.2) chain
D; guessing termini instead  
Chain-initial residues that are actual N termini: /A VAL 333, /C GLN 64, /D
GLN 64  
Chain-initial residues that are not actual N termini: /A ILE 619, /A SER 1428  
Chain-final residues that are actual C termini: /A THR 1585, /C SER 247, /D
SER 247  
Chain-final residues that are not actual C termini: /A SER 579, /A THR 1409  
1302 hydrogen bonds  
Adding 'H' to /A ILE 619  
Adding 'H' to /A SER 1428  
12563 hydrogens added  
  

> hide HC

> isolde start

> set selectionWidth 4

executed isolde.cxc  
Done loading forcefield  

> transparency 0

> transparency 50

> clipper spotlight radius 20.00

> clipper spotlight radius 20.00

> volume #1.1.1.1 level 0.36

> volume #1.1.1.1 level 0.2848

> volume #1.1.1.1 level 0.2634

> volume #1.1.1.1 level 0.1907

> volume #1.1.1.1 level 0.2099

> volume #1.1.1.1 level 0.2536

> select clear

> volume #1.1.1.1 level 0.2361

> volume #1.1.1.1 level 0.2085

> save F:\Chimera\m6a\HWV-J122-Initial_adp_rsr_Final-1.pdb format pdb models
> #1.2

> open F:\Chimera\m6a\HWV-J122-Initial_adp_rsr_Final-1.pdb format pdb

Summary of feedback from opening
F:\Chimera\m6a\HWV-J122-Initial_adp_rsr_Final-1.pdb  
---  
warning | Ignored bad PDB record found on line 25057  
END  
  
Chain information for HWV-J122-Initial_adp_rsr_Final-1.pdb #2  
---  
Chain | Description  
A | No description available  
C D | No description available  
  

> select #2

24946 atoms, 25123 bonds, 4 pseudobonds, 1564 residues, 2 models selected  

> show sel atoms

> hide H

> select clear

> hide #!1.1 models

> close #2

> open F:\Chimera\m6a\HWV-J122-sharp-3A-2.mrc format mrc

Opened HWV-J122-sharp-3A-2.mrc, grid size 336,336,336, pixel 0.82, shown at
level 0.165, step 2, values float32  

> close #2

> open F:\Chimera\m6a\HWV-J122-Initial_adp_rsr_Final.pdb format pdb

Chain information for HWV-J122-Initial_adp_rsr_Final.pdb #2  
---  
Chain | Description  
A | No description available  
C D | No description available  
  

> show atoms

> hide H

> show #!1.1 models

> volume #1.1.1.1 level 0.2948

> volume #1.1.1.1 level 0.2893

> delete H

> save F:\Chimera\m6a\HWV-J122-Initial_adp_rsr_Final-1.pdb format pdb models
> #1.2

> select #1.2/A:1520@CA

1 atom, 1 residue, 1 model selected  

> isolde start

> set selectionWidth 4

Done loading forcefield  

> volume #1.1.1.1 level 0.308

> volume #1.1.1.1 level 0.29

> volume #1.1.1.1 level 0.1856

> volume #1.1.1.1 level 0.1827

> volume #1.1.1.1 level 0.2114

> open F:\Chimera\m6a\0424-1407-3H-.pdb format pdb

Summary of feedback from opening F:\Chimera\m6a\0424-1407-3H-.pdb  
---  
warning | Ignored bad PDB record found on line 13827  
END  
  
Chain information for 0424-1407-3H-.pdb #3  
---  
Chain | Description  
A | No description available  
B | No description available  
C D | No description available  
  

> mmaker #3 to #2

Parameters  
---  
Chain pairing | bb  
Alignment algorithm | Needleman-Wunsch  
Similarity matrix | BLOSUM-62  
SS fraction | 0.3  
Gap open (HH/SS/other) | 18/18/6  
Gap extend | 1  
SS matrix |  |  | H | S | O  
---|---|---|---  
H | 6 | -9 | -6  
S |  | 6 | -6  
O |  |  | 4  
Iteration cutoff | 2  
  
Matchmaker HWV-J122-Initial_adp_rsr_Final.pdb, chain A (#2) with
0424-1407-3H-.pdb, chain A (#3), sequence alignment score = 5759.1  
RMSD between 993 pruned atom pairs is 1.111 angstroms; (across all 1196 pairs:
1.933)  
  

> volume #1.1.1.1 level 0.1681

> show sel atoms

> select clear

> select #3

13571 atoms, 13766 bonds, 4 pseudobonds, 1716 residues, 2 models selected  

> show sel atoms

> select clear

> open F:/Chimera/m6a/Con1_J1407_unmasked-3A.mrc

Opened Con1_J1407_unmasked-3A.mrc, grid size 336,336,336, pixel 0.82, shown at
level 0.16, step 2, values float32  

QWindowsNativeFileDialogBase::shellItem : Unhandled scheme: "data"  

> open F:/Chimera/m6a/0424-1407-3H-.pdb

Summary of feedback from opening F:/Chimera/m6a/0424-1407-3H-.pdb  
---  
warning | Ignored bad PDB record found on line 13827  
END  
  
Chain information for 0424-1407-3H-.pdb #5  
---  
Chain | Description  
A | No description available  
B | No description available  
C D | No description available  
  

> mmaker #5 to #3 bring #5

'bring' arg specifies no non-match/ref structures  

Parameters  
---  
Chain pairing | bb  
Alignment algorithm | Needleman-Wunsch  
Similarity matrix | BLOSUM-62  
SS fraction | 0.3  
Gap open (HH/SS/other) | 18/18/6  
Gap extend | 1  
SS matrix |  |  | H | S | O  
---|---|---|---  
H | 6 | -9 | -6  
S |  | 6 | -6  
O |  |  | 4  
Iteration cutoff | 2  
  
Matchmaker 0424-1407-3H-.pdb, chain A (#3) with 0424-1407-3H-.pdb, chain A
(#5), sequence alignment score = 6131.1  
RMSD between 1196 pruned atom pairs is 0.000 angstroms; (across all 1196
pairs: 0.000)  
  

> transparency 0

> transparency 50

> undo

> select clear

> undo

> select clear

> close #5

> open F:\Chimera\m6a\0424-1407-3H-.pdb format pdb

Summary of feedback from opening F:\Chimera\m6a\0424-1407-3H-.pdb  
---  
warning | Ignored bad PDB record found on line 13827  
END  
  
Chain information for 0424-1407-3H-.pdb #5  
---  
Chain | Description  
A | No description available  
B | No description available  
C D | No description available  
  

> mmaker #5 to #3 bring #4

Parameters  
---  
Chain pairing | bb  
Alignment algorithm | Needleman-Wunsch  
Similarity matrix | BLOSUM-62  
SS fraction | 0.3  
Gap open (HH/SS/other) | 18/18/6  
Gap extend | 1  
SS matrix |  |  | H | S | O  
---|---|---|---  
H | 6 | -9 | -6  
S |  | 6 | -6  
O |  |  | 4  
Iteration cutoff | 2  
  
Matchmaker 0424-1407-3H-.pdb, chain A (#3) with 0424-1407-3H-.pdb, chain A
(#5), sequence alignment score = 6131.1  
RMSD between 1196 pruned atom pairs is 0.000 angstroms; (across all 1196
pairs: 0.000)  
  

> volume #4 step 1

> volume #4 level 0.166

> volume #4 level 0.1722

> volume #4 level 0.1815

> volume #4 level 0.1846

> volume #4 level 0.1908

> volume #4 level 0.1939

> hide #!5 models

> hide #!4 models

> hide #!3 models

> volume #1.1.1.1 level 0.2736

> volume #1.1.1.1 level 0.187

> volume #1.1.1.1 level 0.2365

> show #!4 models

> hide #!4 models

> show #!5 models

> volume #1.1.1.1 level 0.1746

> addh

Summary of feedback from adding hydrogens to multiple structures  
---  
notes | No usable SEQRES records for HWV-J122-Initial_adp_rsr_Final.pdb (#1.2)
chain A; guessing termini instead  
No usable SEQRES records for HWV-J122-Initial_adp_rsr_Final.pdb (#1.2) chain
C; guessing termini instead  
No usable SEQRES records for HWV-J122-Initial_adp_rsr_Final.pdb (#1.2) chain
D; guessing termini instead  
Chain-initial residues that are actual N termini:
HWV-J122-Initial_adp_rsr_Final.pdb #1.2/A VAL 333,
HWV-J122-Initial_adp_rsr_Final.pdb #1.2/C GLN 64,
HWV-J122-Initial_adp_rsr_Final.pdb #1.2/D GLN 64  
Chain-initial residues that are not actual N termini:
HWV-J122-Initial_adp_rsr_Final.pdb #1.2/A ILE 619,
HWV-J122-Initial_adp_rsr_Final.pdb #1.2/A SER 1428  
Chain-final residues that are actual C termini:
HWV-J122-Initial_adp_rsr_Final.pdb #1.2/A THR 1585,
HWV-J122-Initial_adp_rsr_Final.pdb #1.2/C SER 247,
HWV-J122-Initial_adp_rsr_Final.pdb #1.2/D SER 247  
Chain-final residues that are not actual C termini:
HWV-J122-Initial_adp_rsr_Final.pdb #1.2/A SER 579,
HWV-J122-Initial_adp_rsr_Final.pdb #1.2/A THR 1409  
1326 hydrogen bonds  
Adding 'H' to HWV-J122-Initial_adp_rsr_Final.pdb #1.2/A ILE 619  
Adding 'H' to HWV-J122-Initial_adp_rsr_Final.pdb #1.2/A SER 1428  
No usable SEQRES records for HWV-J122-Initial_adp_rsr_Final.pdb (#2) chain A;
guessing termini instead  
No usable SEQRES records for HWV-J122-Initial_adp_rsr_Final.pdb (#2) chain C;
guessing termini instead  
No usable SEQRES records for HWV-J122-Initial_adp_rsr_Final.pdb (#2) chain D;
guessing termini instead  
Chain-initial residues that are actual N termini:
HWV-J122-Initial_adp_rsr_Final.pdb #2/A VAL 333,
HWV-J122-Initial_adp_rsr_Final.pdb #2/C GLN 64,
HWV-J122-Initial_adp_rsr_Final.pdb #2/D GLN 64  
Chain-initial residues that are not actual N termini:
HWV-J122-Initial_adp_rsr_Final.pdb #2/A ILE 619,
HWV-J122-Initial_adp_rsr_Final.pdb #2/A SER 1428  
Chain-final residues that are actual C termini:
HWV-J122-Initial_adp_rsr_Final.pdb #2/A THR 1585,
HWV-J122-Initial_adp_rsr_Final.pdb #2/C SER 247,
HWV-J122-Initial_adp_rsr_Final.pdb #2/D SER 247  
Chain-final residues that are not actual C termini:
HWV-J122-Initial_adp_rsr_Final.pdb #2/A SER 579,
HWV-J122-Initial_adp_rsr_Final.pdb #2/A THR 1409  
1302 hydrogen bonds  
Adding 'H' to HWV-J122-Initial_adp_rsr_Final.pdb #2/A ILE 619  
Adding 'H' to HWV-J122-Initial_adp_rsr_Final.pdb #2/A SER 1428  
Termini for 0424-1407-3H-.pdb (#3) chain A determined from SEQRES records  
Termini for 0424-1407-3H-.pdb (#3) chain B determined from SEQRES records  
Termini for 0424-1407-3H-.pdb (#3) chain C determined from SEQRES records  
Termini for 0424-1407-3H-.pdb (#3) chain D determined from SEQRES records  
Chain-initial residues that are actual N termini: 0424-1407-3H-.pdb #3/A VAL
333, 0424-1407-3H-.pdb #3/B PRO 1492, 0424-1407-3H-.pdb #3/C GLN 64,
0424-1407-3H-.pdb #3/D GLN 64  
Chain-initial residues that are not actual N termini:  
Chain-final residues that are actual C termini: 0424-1407-3H-.pdb #3/A THR
1585, 0424-1407-3H-.pdb #3/B CYS 1643, 0424-1407-3H-.pdb #3/C SER 247,
0424-1407-3H-.pdb #3/D SER 247  
Chain-final residues that are not actual C termini:  
1672 hydrogen bonds  
Termini for 0424-1407-3H-.pdb (#5) chain A determined from SEQRES records  
Termini for 0424-1407-3H-.pdb (#5) chain B determined from SEQRES records  
Termini for 0424-1407-3H-.pdb (#5) chain C determined from SEQRES records  
Termini for 0424-1407-3H-.pdb (#5) chain D determined from SEQRES records  
Chain-initial residues that are actual N termini: 0424-1407-3H-.pdb #5/A VAL
333, 0424-1407-3H-.pdb #5/B PRO 1492, 0424-1407-3H-.pdb #5/C GLN 64,
0424-1407-3H-.pdb #5/D GLN 64  
Chain-initial residues that are not actual N termini:  
Chain-final residues that are actual C termini: 0424-1407-3H-.pdb #5/A THR
1585, 0424-1407-3H-.pdb #5/B CYS 1643, 0424-1407-3H-.pdb #5/C SER 247,
0424-1407-3H-.pdb #5/D SER 247  
Chain-final residues that are not actual C termini:  
1672 hydrogen bonds  
52784 hydrogens added  
  
Traceback (most recent call last):  
File "D:\ChimeraX 1.1\bin\lib\site-packages\chimerax\core\triggerset.py", line
130, in invoke  
return self._func(self._name, data)  
File "C:\Users\92398\AppData\Local\UCSF\ChimeraX\1.1\site-
packages\chimerax\isolde\isolde.py", line 2216, in
_update_selected_residue_info_live  
self.iw._rebuild_sel_res_pep_info.setText(pep_type)  
RuntimeError: wrapped C/C++ object of type QLabel has been deleted  
  
Error processing trigger "changes":  
RuntimeError: wrapped C/C++ object of type QLabel has been deleted  
  
File "C:\Users\92398\AppData\Local\UCSF\ChimeraX\1.1\site-
packages\chimerax\isolde\isolde.py", line 2216, in
_update_selected_residue_info_live  
self.iw._rebuild_sel_res_pep_info.setText(pep_type)  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "D:\ChimeraX 1.1\bin\lib\site-packages\chimerax\core\triggerset.py", line
130, in invoke  
return self._func(self._name, data)  
File "C:\Users\92398\AppData\Local\UCSF\ChimeraX\1.1\site-
packages\chimerax\isolde\isolde.py", line 2216, in
_update_selected_residue_info_live  
self.iw._rebuild_sel_res_pep_info.setText(pep_type)  
RuntimeError: wrapped C/C++ object of type QLabel has been deleted  
  
Error processing trigger "changes":  
RuntimeError: wrapped C/C++ object of type QLabel has been deleted  
  
File "C:\Users\92398\AppData\Local\UCSF\ChimeraX\1.1\site-
packages\chimerax\isolde\isolde.py", line 2216, in
_update_selected_residue_info_live  
self.iw._rebuild_sel_res_pep_info.setText(pep_type)  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "D:\ChimeraX 1.1\bin\lib\site-packages\chimerax\core\triggerset.py", line
130, in invoke  
return self._func(self._name, data)  
File "C:\Users\92398\AppData\Local\UCSF\ChimeraX\1.1\site-
packages\chimerax\isolde\isolde.py", line 2216, in
_update_selected_residue_info_live  
self.iw._rebuild_sel_res_pep_info.setText(pep_type)  
RuntimeError: wrapped C/C++ object of type QLabel has been deleted  
  
Error processing trigger "changes":  
RuntimeError: wrapped C/C++ object of type QLabel has been deleted  
  
File "C:\Users\92398\AppData\Local\UCSF\ChimeraX\1.1\site-
packages\chimerax\isolde\isolde.py", line 2216, in
_update_selected_residue_info_live  
self.iw._rebuild_sel_res_pep_info.setText(pep_type)  
  
See log for complete Python traceback.  
  
[many of these deleted]

Traceback (most recent call last):  
File "D:\ChimeraX 1.1\bin\lib\site-packages\chimerax\core\triggerset.py", line
130, in invoke  
return self._func(self._name, data)  
File "C:\Users\92398\AppData\Local\UCSF\ChimeraX\1.1\site-
packages\chimerax\isolde\isolde.py", line 2216, in
_update_selected_residue_info_live  
self.iw._rebuild_sel_res_pep_info.setText(pep_type)  
RuntimeError: wrapped C/C++ object of type QLabel has been deleted  
  
Error processing trigger "changes":  
RuntimeError: wrapped C/C++ object of type QLabel has been deleted  
  
File "C:\Users\92398\AppData\Local\UCSF\ChimeraX\1.1\site-
packages\chimerax\isolde\isolde.py", line 2216, in
_update_selected_residue_info_live  
self.iw._rebuild_sel_res_pep_info.setText(pep_type)  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "D:\ChimeraX 1.1\bin\lib\site-packages\chimerax\core\triggerset.py", line
130, in invoke  
return self._func(self._name, data)  
File "C:\Users\92398\AppData\Local\UCSF\ChimeraX\1.1\site-
packages\chimerax\isolde\isolde.py", line 2216, in
_update_selected_residue_info_live  
self.iw._rebuild_sel_res_pep_info.setText(pep_type)  
RuntimeError: wrapped C/C++ object of type QLabel has been deleted  
  
Error processing trigger "changes":  
RuntimeError: wrapped C/C++ object of type QLabel has been deleted  
  
File "C:\Users\92398\AppData\Local\UCSF\ChimeraX\1.1\site-
packages\chimerax\isolde\isolde.py", line 2216, in
_update_selected_residue_info_live  
self.iw._rebuild_sel_res_pep_info.setText(pep_type)  
  
See log for complete Python traceback.  
  




OpenGL version: 3.3.0 NVIDIA 461.56
OpenGL renderer: GeForce RTX 3060 Laptop GPU/PCIe/SSE2
OpenGL vendor: NVIDIA Corporation
Manufacturer: MECHREVO
Model: Jiaolong Series GM7NG0M
OS: Microsoft Windows 10 家庭中文版 (Build 19042)
Memory: 16,557,428,736
MaxProcessMemory: 137,438,953,344
CPU: 16 AMD Ryzen 7 4800H with Radeon Graphics         "
PyQt version: 5.12.3
Compiled Qt version: 5.12.4
Runtime Qt version: 5.12.9
Installed Packages:
    alabaster: 0.7.12
    appdirs: 1.4.4
    Babel: 2.8.0
    backcall: 0.2.0
    blockdiag: 2.0.1
    certifi: 2020.6.20
    chardet: 3.0.4
    ChimeraX-AddH: 2.1.3
    ChimeraX-AlignmentAlgorithms: 2.0
    ChimeraX-AlignmentHdrs: 3.2
    ChimeraX-AlignmentMatrices: 2.0
    ChimeraX-Alignments: 2.1
    ChimeraX-Arrays: 1.0
    ChimeraX-Atomic: 1.6.1
    ChimeraX-AtomSearch: 2.0
    ChimeraX-AxesPlanes: 2.0
    ChimeraX-BasicActions: 1.1
    ChimeraX-BILD: 1.0
    ChimeraX-BlastProtein: 1.0.1
    ChimeraX-BondRot: 2.0
    ChimeraX-BugReporter: 1.0
    ChimeraX-BuildStructure: 2.0
    ChimeraX-Bumps: 1.0
    ChimeraX-BundleBuilder: 1.0
    ChimeraX-ButtonPanel: 1.0
    ChimeraX-CageBuilder: 1.0
    ChimeraX-CellPack: 1.0
    ChimeraX-Centroids: 1.1
    ChimeraX-ChemGroup: 2.0
    ChimeraX-Clashes: 2.0
    ChimeraX-Clipper: 0.15.0
    ChimeraX-ColorActions: 1.0
    ChimeraX-ColorGlobe: 1.0
    ChimeraX-CommandLine: 1.1.3
    ChimeraX-ConnectStructure: 2.0
    ChimeraX-Contacts: 1.0
    ChimeraX-Core: 1.1
    ChimeraX-CoreFormats: 1.0
    ChimeraX-coulombic: 1.0.1
    ChimeraX-Crosslinks: 1.0
    ChimeraX-Crystal: 1.0
    ChimeraX-DataFormats: 1.0
    ChimeraX-Dicom: 1.0
    ChimeraX-DistMonitor: 1.1
    ChimeraX-DistUI: 1.0
    ChimeraX-Dssp: 2.0
    ChimeraX-EMDB-SFF: 1.0
    ChimeraX-ExperimentalCommands: 1.0
    ChimeraX-FileHistory: 1.0
    ChimeraX-FunctionKey: 1.0
    ChimeraX-Geometry: 1.1
    ChimeraX-gltf: 1.0
    ChimeraX-Graphics: 1.0
    ChimeraX-Hbonds: 2.0
    ChimeraX-Help: 1.0
    ChimeraX-HKCage: 1.3
    ChimeraX-IHM: 1.0
    ChimeraX-ImageFormats: 1.0
    ChimeraX-IMOD: 1.0
    ChimeraX-IO: 1.0
    ChimeraX-ISOLDE: 1.1.0
    ChimeraX-Label: 1.0
    ChimeraX-ListInfo: 1.0
    ChimeraX-Log: 1.1.1
    ChimeraX-LookingGlass: 1.1
    ChimeraX-Map: 1.0.1
    ChimeraX-MapData: 2.0
    ChimeraX-MapEraser: 1.0
    ChimeraX-MapFilter: 2.0
    ChimeraX-MapFit: 2.0
    ChimeraX-MapSeries: 2.0
    ChimeraX-Markers: 1.0
    ChimeraX-Mask: 1.0
    ChimeraX-MatchMaker: 1.1
    ChimeraX-MDcrds: 2.0
    ChimeraX-MedicalToolbar: 1.0.1
    ChimeraX-Meeting: 1.0
    ChimeraX-MLP: 1.0
    ChimeraX-mmCIF: 2.2
    ChimeraX-MMTF: 2.0
    ChimeraX-Modeller: 1.0
    ChimeraX-ModelPanel: 1.0
    ChimeraX-ModelSeries: 1.0
    ChimeraX-Mol2: 2.0
    ChimeraX-Morph: 1.0
    ChimeraX-MouseModes: 1.0
    ChimeraX-Movie: 1.0
    ChimeraX-Neuron: 1.0
    ChimeraX-Nucleotides: 2.0
    ChimeraX-OpenCommand: 1.2.1
    ChimeraX-PDB: 2.1
    ChimeraX-PDBBio: 1.0
    ChimeraX-PickBlobs: 1.0
    ChimeraX-Positions: 1.0
    ChimeraX-PresetMgr: 1.0
    ChimeraX-PubChem: 2.0
    ChimeraX-Read-Pbonds: 1.0
    ChimeraX-Registration: 1.1
    ChimeraX-RemoteControl: 1.0
    ChimeraX-ResidueFit: 1.0
    ChimeraX-RestServer: 1.0
    ChimeraX-RNALayout: 1.0
    ChimeraX-RotamerLibMgr: 2.0
    ChimeraX-RotamerLibsDunbrack: 2.0
    ChimeraX-RotamerLibsDynameomics: 2.0
    ChimeraX-RotamerLibsRichardson: 2.0
    ChimeraX-SaveCommand: 1.2
    ChimeraX-SchemeMgr: 1.0
    ChimeraX-SDF: 2.0
    ChimeraX-Segger: 1.0
    ChimeraX-Segment: 1.0
    ChimeraX-SeqView: 2.2
    ChimeraX-Shape: 1.0.1
    ChimeraX-Shell: 1.0
    ChimeraX-Shortcuts: 1.0
    ChimeraX-ShowAttr: 1.0
    ChimeraX-ShowSequences: 1.0
    ChimeraX-SideView: 1.0
    ChimeraX-Smiles: 2.0
    ChimeraX-SmoothLines: 1.0
    ChimeraX-SpaceNavigator: 1.0
    ChimeraX-StdCommands: 1.0.4
    ChimeraX-STL: 1.0
    ChimeraX-Storm: 1.0
    ChimeraX-Struts: 1.0
    ChimeraX-Surface: 1.0
    ChimeraX-SwapAA: 2.0
    ChimeraX-SwapRes: 2.0
    ChimeraX-TapeMeasure: 1.0
    ChimeraX-Test: 1.0
    ChimeraX-Toolbar: 1.0
    ChimeraX-ToolshedUtils: 1.0
    ChimeraX-Tug: 1.0
    ChimeraX-UI: 1.2.3
    ChimeraX-uniprot: 2.0
    ChimeraX-ViewDockX: 1.0
    ChimeraX-Vive: 1.1
    ChimeraX-VolumeMenu: 1.0
    ChimeraX-VTK: 1.0
    ChimeraX-WavefrontOBJ: 1.0
    ChimeraX-WebCam: 1.0
    ChimeraX-WebServices: 1.0
    ChimeraX-Zone: 1.0
    colorama: 0.4.3
    comtypes: 1.1.7
    cxservices: 1.0
    cycler: 0.10.0
    Cython: 0.29.20
    decorator: 4.4.2
    distlib: 0.3.1
    docutils: 0.16
    filelock: 3.0.12
    funcparserlib: 0.3.6
    gdcm: 2.8.8
    grako: 3.16.5
    h5py: 2.10.0
    html2text: 2020.1.16
    idna: 2.10
    ihm: 0.16
    imagecodecs: 2020.5.30
    imagecodecs-lite: 2020.1.31
    imagesize: 1.2.0
    ipykernel: 5.3.0
    ipython: 7.15.0
    ipython-genutils: 0.2.0
    jedi: 0.17.2
    Jinja2: 2.11.2
    jupyter-client: 6.1.3
    jupyter-core: 4.6.3
    kiwisolver: 1.2.0
    line-profiler: 2.1.2
    lxml: 4.5.1
    MarkupSafe: 1.1.1
    matplotlib: 3.2.1
    msgpack: 1.0.0
    netifaces: 0.10.9
    networkx: 2.4
    numexpr: 2.7.1
    numpy: 1.18.5+mkl
    numpydoc: 1.0.0
    openvr: 1.12.501
    packaging: 20.4
    parso: 0.7.1
    pickleshare: 0.7.5
    Pillow: 7.1.2
    pip: 20.2.2
    pkginfo: 1.5.0.1
    prompt-toolkit: 3.0.7
    psutil: 5.7.0
    pycollada: 0.7.1
    pydicom: 2.0.0
    Pygments: 2.6.1
    PyOpenGL: 3.1.5
    PyOpenGL-accelerate: 3.1.5
    pyparsing: 2.4.7
    PyQt5-commercial: 5.12.3
    PyQt5-sip: 4.19.19
    PyQtWebEngine-commercial: 5.12.1
    python-dateutil: 2.8.1
    pytz: 2020.1
    pywin32: 228
    pyzmq: 19.0.2
    qtconsole: 4.7.4
    QtPy: 1.9.0
    RandomWords: 0.3.0
    requests: 2.24.0
    scipy: 1.4.1
    setuptools: 49.4.0
    sfftk-rw: 0.6.6.dev0
    six: 1.15.0
    snowballstemmer: 2.0.0
    sortedcontainers: 2.2.2
    Sphinx: 3.1.1
    sphinxcontrib-applehelp: 1.0.2
    sphinxcontrib-blockdiag: 2.0.0
    sphinxcontrib-devhelp: 1.0.2
    sphinxcontrib-htmlhelp: 1.0.3
    sphinxcontrib-jsmath: 1.0.1
    sphinxcontrib-qthelp: 1.0.3
    sphinxcontrib-serializinghtml: 1.1.4
    suds-jurko: 0.6
    tables: 3.6.1
    tifffile: 2020.6.3
    tinyarray: 1.2.2
    tornado: 6.0.4
    traitlets: 5.0.4
    urllib3: 1.25.10
    wcwidth: 0.2.5
    webcolors: 1.11.1
    wheel: 0.34.2
    WMI: 1.5.1

Change History (2)

comment:1 by pett, 4 years ago

Component:	Unassigned → Third Party
Description:	modified (diff)
Owner:	set to Tristan Croll
Platform:	→ all
Project:	→ ChimeraX
Status:	new → assigned
Summary:	ChimeraX bug report submission → ISOLDE: wrapped C/C++ object of type QLabel has been deleted

Reported by Shichen Su

comment:2 by Tristan Croll, 3 years ago

Resolution:	→ fixed
Status:	assigned → closed

Long since fixed, but I forgot to close this ticket. Sorry!

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