![[ChimeraX Issue Tracking System]](/trac/ChimeraX/chrome/site/ChimeraX-icon.svg){kind=icon}
Opened 4 years ago
Closed 4 years ago
#4576 closed defect (can't reproduce)
Trashed stack on Big Sur
| Reported by: | Owned by: | pett | |
|---|---|---|---|
| Priority: | normal | Milestone: | |
| Component: | Core | Version: | |
| Keywords: | Cc: | Tom Goddard | |
| Blocked By: | Blocking: | ||
| Notify when closed: | Platform: | all | |
| Project: | ChimeraX |
Description
The following bug report has been submitted:
Platform: Darwin-20.3.0-x86_64-i386-64bit
ChimeraX Version: 1.1.1 (2020-10-07 08:32:49 UTC)
Description
Last time you used ChimeraX it crashed.
Please describe steps that led to the crash here.
Process: ChimeraX [31161]
Path: /private/var/folders/*/ChimeraX-1.1.1.app/Contents/MacOS/ChimeraX
Identifier: edu.ucsf.cgl.ChimeraX
Version: 1.1.1 (1.1.1.0)
Code Type: X86-64 (Native)
Parent Process: ??? [1]
Responsible: ChimeraX [31161]
User ID: 501
Date/Time: 2021-04-27 15:45:51.269 +0100
OS Version: macOS 11.2.3 (20D91)
Report Version: 12
Bridge OS Version: 5.2 (18P4347)
Anonymous UUID: 5F321814-1208-BA94-030C-1F333D920AF9
Sleep/Wake UUID: 3B9855E5-9C0F-4C5C-A7D4-164E3024770E
Time Awake Since Boot: 140000 seconds
Time Since Wake: 360 seconds
System Integrity Protection: enabled
Crashed Thread: 0 CrBrowserMain
Exception Type: EXC_BAD_ACCESS (SIGILL)
Exception Codes: KERN_MEMORY_ERROR at 0x000000010f45e080
Exception Note: EXC_CORPSE_NOTIFY
Termination Signal: Illegal instruction: 4
Termination Reason: Namespace SIGNAL, Code 0x4
Terminating Process: ChimeraX [31161]
VM Regions Near 0x10f45e080:
VM_ALLOCATE 10f2be000-10f2bf000 [ 4K] rwx/rwx SM=COW
--> mapped file 10f2bf000-10f4bb000 [ 2032K] r-x/rwx SM=COW Object_id=4144e14b
mapped file 10f4bb000-10f520000 [ 404K] rw-/rwx SM=COW Object_id=3ee4304b
Thread 0 Crashed:: CrBrowserMain
0 ??? 0x000000010f45e080 0 + 4551204992
1 ??? 0x0000100000001800 0 + 17592186050560
2 ??? 0x0000800000008000 0 + 140737488388096
3 ??? 0x0000000200000002 0 + 8589934594
4 ChimeraX 000000000000000000 0 + 0
5 ??? 0x0002000000028000 0 + 562949953585152
6 ??? 0x1000000010000000 0 + 1152921504875282432
7 ??? 0x0000000400000004 0 + 17179869188
8 ??? 0x0020000000200000 0 + 9007199256838144
9 ??? 0x0000080000000800 0 + 8796093024256
10 ??? 0x0800000008000000 0 + 576460752437641216
11 ??? 0x0000800000008000 0 + 140737488388096
12 ChimeraX 000000000000000000 0 + 0
13 ??? 0x0000000125f227a8 0 + 4931594152
14 ??? 0x000000640000002f 0 + 429496729647
15 ??? 0x10e5b998c5fe774a 0 + 1217583340081542986
16 ??? 0x0000006900000068 0 + 450971566184
17 ??? 0x0000007000000078 0 + 481036337272
18 ??? 0x0064037c037d01a1 0 + 28151328840417697
19 ChimeraX 000000000000000000 0 + 0
20 ChimeraX 000000000000000000 0 + 0
21 ChimeraX 000000000000000000 0 + 0
22 ??? 0x0000003800000036 0 + 240518168630
23 ChimeraX 000000000000000000 0 + 0
24 ??? 0x2072656765746e69 0 + 2338042651316874857
25 ??? 0x000000010f889df0 0 + 4555578864
26 ChimeraX 000000000000000000 0 + 0
27 ??? 0x616c6572202c7465 0 + 7020097460004222053
28 ??? 0x00007facc9d73f60 0 + 140380097429344
29 ChimeraX 000000000000000000 0 + 0
30 ??? 0x000000010f300330 0 + 4549772080
31 ??? 0x000000010f93edb0 0 + 4556320176
32 ChimeraX 000000000000000000 0 + 0
33 ??? 0x000000010f522940 0 + 4552010048
34 ??? 0x5d392d305b3f5f3a 0 + 6717450004912365370
35 ??? 0x000000010fd1bc60 0 + 4560370784
36 ChimeraX 000000000000000000 0 + 0
37 ChimeraX 000000000000000000 0 + 0
38 ChimeraX 000000000000000000 0 + 0
39 ??? 0x000000010f32e240 0 + 4549960256
40 ??? 0x292a295d392d305b 0 + 2966228784944853083
41 ChimeraX 000000000000000000 0 + 0
42 ??? 0x000000010f2ee650 0 + 4549699152
43 ChimeraX 000000000000000000 0 + 0
44 ??? 0x000000010f9577a0 0 + 4556421024
45 ChimeraX 000000000000000000 0 + 0
46 ??? 0x000000010f957f80 0 + 4556423040
47 ??? 0xd904364f3ea18e80 0 + 15637683520118296192
48 ChimeraX 000000000000000000 0 + 0
49 ??? 0x616d65732072616c 0 + 7020378939280482668
50 ChimeraX 000000000000000000 0 + 0
51 ??? 0x000000010f9553a0 0 + 4556411808
52 ChimeraX 000000000000000000 0 + 0
53 ??? 0x00000000000c5601 0 + 808449
54 ChimeraX 000000000000000000 0 + 0
55 ??? 0x000000010f8253f0 0 + 4555166704
56 ??? 0x000000010f99b4e0 0 + 4556698848
57 ChimeraX 000000000000000000 0 + 0
58 ChimeraX 000000000000000000 0 + 0
59 ChimeraX 000000000000000000 0 + 0
60 ??? 0x000000010f4dac50 0 + 4551715920
61 ??? 0x000000010f4d6f58 0 + 4551700312
62 ??? 0x000000010fd4e5a0 0 + 4560577952
63 ??? 0x000000010f334220 0 + 4549984800
64 ChimeraX 000000000000000000 0 + 0
65 ??? 0x000000010fd43870 0 + 4560533616
66 ChimeraX 000000000000000000 0 + 0
67 ChimeraX 000000000000000000 0 + 0
68 ChimeraX 000000000000000000 0 + 0
69 ??? 0x000000010f3e4eb0 0 + 4550708912
70 ChimeraX 000000000000000000 0 + 0
71 ??? 0x000000010f4cf820 0 + 4551669792
72 ChimeraX 000000000000000000 0 + 0
73 ??? 0x000000010f875a70 0 + 4555496048
74 ChimeraX 000000000000000000 0 + 0
75 ChimeraX 000000000000000000 0 + 0
76 ChimeraX 000000000000000000 0 + 0
77 ChimeraX 000000000000000000 0 + 0
78 ChimeraX 000000000000000000 0 + 0
79 ??? 0x20656874206e7275 0 + 2334386829831074421
80 ??? 0x000900010f67d530 0 + 2533279343826224
81 ??? 0x0000600000162c30 0 + 105553117719600
82 ??? 0x6572206568542020 0 + 7309940765089865760
83 ??? 0x672065636e617473 0 + 7431050862889366643
84 ChimeraX 000000000000000000 0 + 0
85 ??? 0x73656d2065687420 0 + 8315172272917214240
86 ??? 0x74636e7570204949 0 + 8386668381765388617
87 ChimeraX 000000000000000000 0 + 0
88 ChimeraX 000000000000000000 0 + 0
89 ??? 0x000000010f520940 0 + 4552001856
90 ??? 0x9ff4413406c99ca8 0 + 11525909038055922856
91 ChimeraX 000000000000000000 0 + 0
92 ChimeraX 000000000000000000 0 + 0
93 ChimeraX 000000000000000000 0 + 0
94 ??? 0x000000010fd93710 0 + 4560860944
95 ??? 0x000000010f4dac50 0 + 4551715920
96 ChimeraX 000000000000000000 0 + 0
97 ChimeraX 000000000000000000 0 + 0
98 ChimeraX 000000000000000000 0 + 0
99 ChimeraX 000000000000000000 0 + 0
100 ChimeraX 000000000000000000 0 + 0
101 ChimeraX 000000000000000000 0 + 0
102 ChimeraX 000000000000000000 0 + 0
103 ChimeraX 000000000000000000 0 + 0
104 ??? 0x000000010f334380 0 + 4549985152
105 ChimeraX 000000000000000000 0 + 0
106 ??? 0x686320676e696767 0 + 7521891431244982119
107 ChimeraX 000000000000000000 0 + 0
108 ChimeraX 000000000000000000 0 + 0
109 ChimeraX 000000000000000000 0 + 0
110 ??? 0xe6b8df9dcf65ec74 0 + 16625283893320608884
111 ??? 0x2065687420736b63 0 + 2334386829831400291
112 ??? 0x000000010f340200 0 + 4550033920
113 ??? 0x000000010fdebab0 0 + 4561222320
114 ChimeraX 000000000000000000 0 + 0
115 ChimeraX 000000000000000000 0 + 0
116 ??? 0x1d8b2a5000007fac 0 + 2128841771948474284
117 ??? 0x207972616e696220 0 + 2340027244185477664
118 ??? 0x0000000000002020 0 + 8224
119 ??? 0x000000010f694df0 0 + 4553526768
120 ChimeraX 000000000000000000 0 + 0
121 ??? 0x000000010f2fdef0 0 + 4549762800
122 ??? 0x656c7075742d3220 0 + 7308339945078075936
123 ??? 0x697420746e696f70 0 + 7598734155721568112
Thread 1:: com.apple.NSEventThread
0 ??? 0x00007fff20493e7e 0 + 140733735059070
1 ??? 0x00007fff204941f0 0 + 140733735059952
2 ??? 0x00007fff205c0bf7 0 + 140733736291319
3 ??? 0x00007fff205bf2ca 0 + 140733736284874
4 ??? 0x00007fff205be6ce 0 + 140733736281806
5 ??? 0x00007fff22f647c6 0 + 140733779953606
6 ??? 0x00007fff204c8950 0 + 140733735274832
7 ??? 0x00007fff204c447b 0 + 140733735257211
Thread 2:: NetworkConfigWatcher
0 ??? 0x00007fff20493e7e 0 + 140733735059070
1 ??? 0x00007fff204941f0 0 + 140733735059952
2 ??? 0x0000000121aac32d 0 + 4859806509
3 ??? 0x0000000121aac22f 0 + 4859806255
4 ??? 0x0000000121a6005d 0 + 4859494493
5 ??? 0x0000000121a89085 0 + 4859662469
6 ??? 0x0000000121adb9bc 0 + 4860000700
7 ??? 0x0000000121b1b717 0 + 4860262167
8 ??? 0x00007fff204c8950 0 + 140733735274832
9 ??? 0x00007fff204c447b 0 + 140733735257211
Thread 3:: DnsConfigService
0 ??? 0x00007fff204987e2 0 + 140733735077858
1 ??? 0x0000000121d6acbd 0 + 4862684349
2 ??? 0x0000000121b21cdc 0 + 4860288220
3 ??? 0x0000000121a89085 0 + 4859662469
4 ??? 0x0000000121adb9bc 0 + 4860000700
5 ??? 0x0000000121b1b717 0 + 4860262167
6 ??? 0x00007fff204c8950 0 + 140733735274832
7 ??? 0x00007fff204c447b 0 + 140733735257211
Thread 4:: TaskSchedulerServiceThread
0 ??? 0x00007fff204987e2 0 + 140733735077858
1 ??? 0x0000000121d6acbd 0 + 4862684349
2 ??? 0x0000000121b21cc4 0 + 4860288196
3 ??? 0x0000000121a89085 0 + 4859662469
4 ??? 0x0000000121acaa74 0 + 4859931252
5 ??? 0x0000000121adb9bc 0 + 4860000700
6 ??? 0x0000000121b1b717 0 + 4860262167
7 ??? 0x00007fff204c8950 0 + 140733735274832
8 ??? 0x00007fff204c447b 0 + 140733735257211
Thread 5:: TaskSchedulerForegroundWorker
0 ??? 0x00007fff20493e7e 0 + 140733735059070
1 ??? 0x00007fff204941f0 0 + 140733735059952
2 ??? 0x0000000121aac32d 0 + 4859806509
3 ??? 0x0000000121aac421 0 + 4859806753
4 ??? 0x0000000121ac3d28 0 + 4859903272
5 ??? 0x0000000121ac465b 0 + 4859905627
6 ??? 0x0000000121ac42c4 0 + 4859904708
7 ??? 0x0000000121b1b717 0 + 4860262167
8 ??? 0x00007fff204c8950 0 + 140733735274832
9 ??? 0x00007fff204c447b 0 + 140733735257211
Thread 6:: TaskSchedulerForegroundBlockingWorker
0 ??? 0x00007fff20493e7e 0 + 140733735059070
1 ??? 0x00007fff204941f0 0 + 140733735059952
2 ??? 0x0000000121aac32d 0 + 4859806509
3 ??? 0x0000000121aac421 0 + 4859806753
4 ??? 0x0000000121ac3d28 0 + 4859903272
5 ??? 0x0000000121ac465b 0 + 4859905627
6 ??? 0x0000000121ac42c4 0 + 4859904708
7 ??? 0x0000000121b1b717 0 + 4860262167
8 ??? 0x00007fff204c8950 0 + 140733735274832
9 ??? 0x00007fff204c447b 0 + 140733735257211
Thread 7:: TaskSchedulerBackgroundWorker
0 ??? 0x00007fff20493e7e 0 + 140733735059070
1 ??? 0x00007fff204941f0 0 + 140733735059952
2 ??? 0x0000000121aac32d 0 + 4859806509
3 ??? 0x0000000121aac421 0 + 4859806753
4 ??? 0x0000000121ac3d28 0 + 4859903272
5 ??? 0x0000000121ac465b 0 + 4859905627
6 ??? 0x0000000121ac4234 0 + 4859904564
7 ??? 0x0000000121b1b717 0 + 4860262167
8 ??? 0x00007fff204c8950 0 + 140733735274832
9 ??? 0x00007fff204c447b 0 + 140733735257211
Thread 8:: TaskSchedulerBackgroundBlockingWorker
0 ??? 0x00007fff20493e7e 0 + 140733735059070
1 ??? 0x00007fff204941f0 0 + 140733735059952
2 ??? 0x0000000121aac32d 0 + 4859806509
3 ??? 0x0000000121aac421 0 + 4859806753
4 ??? 0x0000000121ac3d28 0 + 4859903272
5 ??? 0x0000000121ac465b 0 + 4859905627
6 ??? 0x0000000121ac4234 0 + 4859904564
7 ??? 0x0000000121b1b717 0 + 4860262167
8 ??? 0x00007fff204c8950 0 + 140733735274832
9 ??? 0x00007fff204c447b 0 + 140733735257211
Thread 9:: Chrome_IOThread
0 ??? 0x00007fff204987e2 0 + 140733735077858
1 ??? 0x0000000121d6acbd 0 + 4862684349
2 ??? 0x0000000121b21cc4 0 + 4860288196
3 ??? 0x0000000121a89085 0 + 4859662469
4 ??? 0x00000001213f7fe4 0 + 4852776932
5 ??? 0x0000000121adb9bc 0 + 4860000700
6 ??? 0x0000000121b1b717 0 + 4860262167
7 ??? 0x00007fff204c8950 0 + 140733735274832
8 ??? 0x00007fff204c447b 0 + 140733735257211
Thread 10:: TaskSchedulerSingleThreadSharedBackgroundBlocking0
0 ??? 0x00007fff20493e7e 0 + 140733735059070
1 ??? 0x00007fff204941f0 0 + 140733735059952
2 ??? 0x0000000121aac32d 0 + 4859806509
3 ??? 0x0000000121aac22f 0 + 4859806255
4 ??? 0x0000000121ac3d1a 0 + 4859903258
5 ??? 0x0000000121ac43bf 0 + 4859904959
6 ??? 0x0000000121ac4264 0 + 4859904612
7 ??? 0x0000000121b1b717 0 + 4860262167
8 ??? 0x00007fff204c8950 0 + 140733735274832
9 ??? 0x00007fff204c447b 0 + 140733735257211
Thread 11:: CompositorTileWorker1/59651
0 ??? 0x00007fff204968e2 0 + 140733735069922
1 ??? 0x0000000121b19fa8 0 + 4860256168
2 ??? 0x0000000122aa04c8 0 + 4876534984
3 ??? 0x0000000121ada694 0 + 4859995796
4 ??? 0x0000000121b1b717 0 + 4860262167
5 ??? 0x00007fff204c8950 0 + 140733735274832
6 ??? 0x00007fff204c447b 0 + 140733735257211
Thread 12:: AudioThread
0 ??? 0x00007fff20493e7e 0 + 140733735059070
1 ??? 0x00007fff204941f0 0 + 140733735059952
2 ??? 0x0000000121aac32d 0 + 4859806509
3 ??? 0x0000000121aac22f 0 + 4859806255
4 ??? 0x0000000121a6005d 0 + 4859494493
5 ??? 0x0000000121a89085 0 + 4859662469
6 ??? 0x0000000121adb9bc 0 + 4860000700
7 ??? 0x0000000121b1b717 0 + 4860262167
8 ??? 0x00007fff204c8950 0 + 140733735274832
9 ??? 0x00007fff204c447b 0 + 140733735257211
Thread 13:: Chrome_InProcGpuThread
0 ??? 0x00007fff20493e7e 0 + 140733735059070
1 ??? 0x00007fff204941f0 0 + 140733735059952
2 ??? 0x0000000121aac32d 0 + 4859806509
3 ??? 0x0000000121a60052 0 + 4859494482
4 ??? 0x0000000121a89085 0 + 4859662469
5 ??? 0x0000000121adb9bc 0 + 4860000700
6 ??? 0x0000000121b1b717 0 + 4860262167
7 ??? 0x00007fff204c8950 0 + 140733735274832
8 ??? 0x00007fff204c447b 0 + 140733735257211
Thread 14:: Chrome_ChildIOThread
0 ??? 0x00007fff204987e2 0 + 140733735077858
1 ??? 0x0000000121d6acbd 0 + 4862684349
2 ??? 0x0000000121b21cdc 0 + 4860288220
3 ??? 0x0000000121a89085 0 + 4859662469
4 ??? 0x0000000121adb9bc 0 + 4860000700
5 ??? 0x0000000121b1b717 0 + 4860262167
6 ??? 0x00007fff204c8950 0 + 140733735274832
7 ??? 0x00007fff204c447b 0 + 140733735257211
Thread 15:: NetworkConfigWatcher
0 ??? 0x00007fff20493e7e 0 + 140733735059070
1 ??? 0x00007fff204941f0 0 + 140733735059952
2 ??? 0x0000000121aac32d 0 + 4859806509
3 ??? 0x0000000121aac22f 0 + 4859806255
4 ??? 0x0000000121a6005d 0 + 4859494493
5 ??? 0x0000000121a89085 0 + 4859662469
6 ??? 0x0000000121adb9bc 0 + 4860000700
7 ??? 0x0000000121b1b717 0 + 4860262167
8 ??? 0x00007fff204c8950 0 + 140733735274832
9 ??? 0x00007fff204c447b 0 + 140733735257211
Thread 16:: TaskSchedulerSingleThreadForegroundBlocking1
0 ??? 0x00007fff20493e7e 0 + 140733735059070
1 ??? 0x00007fff204941f0 0 + 140733735059952
2 ??? 0x0000000121aac32d 0 + 4859806509
3 ??? 0x0000000121aac22f 0 + 4859806255
4 ??? 0x0000000121ac3d1a 0 + 4859903258
5 ??? 0x0000000121ac465b 0 + 4859905627
6 ??? 0x0000000121ac4324 0 + 4859904804
7 ??? 0x0000000121b1b717 0 + 4860262167
8 ??? 0x00007fff204c8950 0 + 140733735274832
9 ??? 0x00007fff204c447b 0 + 140733735257211
Thread 17:: NetworkConfigWatcher
0 ??? 0x00007fff20493e7e 0 + 140733735059070
1 ??? 0x00007fff204941f0 0 + 140733735059952
2 ??? 0x0000000121aac32d 0 + 4859806509
3 ??? 0x0000000121aac22f 0 + 4859806255
4 ??? 0x0000000121a6005d 0 + 4859494493
5 ??? 0x0000000121a89085 0 + 4859662469
6 ??? 0x0000000121adb9bc 0 + 4860000700
7 ??? 0x0000000121b1b717 0 + 4860262167
8 ??? 0x00007fff204c8950 0 + 140733735274832
9 ??? 0x00007fff204c447b 0 + 140733735257211
Thread 18:
0 ??? 0x00007fff204968e2 0 + 140733735069922
1 ??? 0x000000015f60dc3b 0 + 5895150651
2 ??? 0x00007fff204c8950 0 + 140733735274832
3 ??? 0x00007fff204c447b 0 + 140733735257211
Thread 19:
0 ??? 0x00007fff204968e2 0 + 140733735069922
1 ??? 0x000000015f60dc3b 0 + 5895150651
2 ??? 0x00007fff204c8950 0 + 140733735274832
3 ??? 0x00007fff204c447b 0 + 140733735257211
Thread 20:
0 ??? 0x00007fff204968e2 0 + 140733735069922
1 ??? 0x000000015f60dc3b 0 + 5895150651
2 ??? 0x00007fff204c8950 0 + 140733735274832
3 ??? 0x00007fff204c447b 0 + 140733735257211
Thread 21:
0 ??? 0x00007fff204968e2 0 + 140733735069922
1 ??? 0x0000000110c1bc3b 0 + 4576099387
2 ??? 0x00007fff204c8950 0 + 140733735274832
3 ??? 0x00007fff204c447b 0 + 140733735257211
Thread 22:
0 ??? 0x00007fff204968e2 0 + 140733735069922
1 ??? 0x0000000110c1bc3b 0 + 4576099387
2 ??? 0x00007fff204c8950 0 + 140733735274832
3 ??? 0x00007fff204c447b 0 + 140733735257211
Thread 23:
0 ??? 0x00007fff204968e2 0 + 140733735069922
1 ??? 0x0000000110c1bc3b 0 + 4576099387
2 ??? 0x00007fff204c8950 0 + 140733735274832
3 ??? 0x00007fff204c447b 0 + 140733735257211
Thread 24:
0 ??? 0x00007fff204c4458 0 + 140733735257176
Thread 0 crashed with X86 Thread State (64-bit):
rax: 0x000000010f45e080 rbx: 0x00007facc4c006d0 rcx: 0x00007facc4c00668 rdx: 0x00007facc4c006d0
rdi: 0x000000000000000a rsi: 0x00007facc4c00668 rbp: 0x00007facc4c00240 rsp: 0x00007facc4c00238
r8: 0x00007facc4c006d0 r9: 0x69f23518a95f99ac r10: 0x0000000000000000 r11: 0x00000000ffffff00
r12: 0x69f23518a95f99ac r13: 0x000060000327a440 r14: 0x0000000000000040 r15: 0x0000000000000000
rip: 0x000000010f45e080 rfl: 0x0000000000010206 cr2: 0x000000010f45e080
Logical CPU: 4
Error Code: 0x00000014 (no mapping for user instruction read)
Trap Number: 14
Thread 0 instruction stream not available.
Thread 0 last branch register state not available.
Binary Images:
0 - 0xffffffffffffffff +ChimeraX (???) /private/var/folders/*/ChimeraX-1.1.1.app/Contents/MacOS/ChimeraX
0x11d809000 - 0x11d8a4fff dyld (832.7.3) /usr/lib/dyld
External Modification Summary:
Calls made by other processes targeting this process:
task_for_pid: 81
thread_create: 0
thread_set_state: 0
Calls made by this process:
task_for_pid: 0
thread_create: 0
thread_set_state: 0
Calls made by all processes on this machine:
task_for_pid: 112099
thread_create: 0
thread_set_state: 0
VM Region Summary:
ReadOnly portion of Libraries: Total=848K resident=0K(0%) swapped_out_or_unallocated=848K(100%)
Writable regions: Total=1.7G written=0K(0%) resident=0K(0%) swapped_out=0K(0%) unallocated=1.7G(100%)
VIRTUAL REGION
REGION TYPE SIZE COUNT (non-coalesced)
=========== ======= =======
Accelerate framework 1152K 9
Activity Tracing 256K 1
CG backing stores 4320K 12
CG image 520K 43
CoreAnimation 356K 53
CoreGraphics 16K 3
CoreUI image data 5336K 57
Foundation 32K 2
Kernel Alloc Once 1384K 5
MALLOC 1.1G 704
MALLOC guard page 32K 8
MALLOC_LARGE (reserved) 384K 1 reserved VM address space (unallocated)
OpenGL GLSL 512K 6
STACK GUARD 96K 24
Stack 140.2M 25
Stack Guard 56.0M 1
VM_ALLOCATE 371.4M 753
VM_ALLOCATE (reserved) 128.0M 2 reserved VM address space (unallocated)
__DATA 224K 2
__DATA_CONST 32K 1
__LINKEDIT 240K 2
__TEXT 624K 1
dylib 1980K 38
dylib (reserved) 84K 10 reserved VM address space (unallocated)
mapped file 595.7M 601
shared memory 48K 6
=========== ======= =======
TOTAL 2.4G 2370
TOTAL, minus reserved VM space 2.2G 2370
System Profile:
Network Service: Wi-Fi, AirPort, en0
bridge_os_version: Bridge OS 5.2 (18P4347)
Boot Volume File System Type: apfs
bridge_model: iBridge2,10
Memory Module: BANK 0/ChannelA-DIMM0, 4 GB, LPDDR3, 2133 MHz, Samsung, K4E6E304EC-EGCG
Memory Module: BANK 2/ChannelB-DIMM0, 4 GB, LPDDR3, 2133 MHz, Samsung, K4E6E304EC-EGCG
USB Device: USB 3.1 Bus
USB Device: Apple T2 Bus
USB Device: Touch Bar Backlight
USB Device: Touch Bar Display
USB Device: Apple Internal Keyboard / Trackpad
USB Device: Headset
USB Device: Ambient Light Sensor
USB Device: FaceTime HD Camera (Built-in)
USB Device: Apple T2 Controller
Thunderbolt Bus: MacBook Pro, Apple Inc., 63.5
Model: MacBookPro15,4, BootROM 1554.80.3.0.0 (iBridge: 18.16.14347.0.0,0), 4 processors, Quad-Core Intel Core i5, 1.4 GHz, 8 GB, SMC
Graphics: kHW_IntelIrisGraphics645Item, Intel Iris Plus Graphics 645, spdisplays_builtin
AirPort: spairport_wireless_card_type_airport_extreme, wl0: Dec 9 2020 01:09:28 version 16.20.293.6.3.6.96 FWID 01-72ab9dcc
Bluetooth: Version 8.0.3d9, 3 services, 27 devices, 1 incoming serial ports
Log:
UCSF ChimeraX version: 1.1.1 (2020-10-07)
© 2016-2020 Regents of the University of California. All rights reserved.
How to cite UCSF ChimeraX
OpenGL version: 4.1 INTEL-16.1.12
OpenGL renderer: Intel(R) Iris(TM) Plus Graphics 645
OpenGL vendor: Intel Inc.Hardware:
Hardware Overview:
Model Name: MacBook Pro
Model Identifier: MacBookPro15,4
Processor Name: Quad-Core Intel Core i5
Processor Speed: 1.4 GHz
Number of Processors: 1
Total Number of Cores: 4
L2 Cache (per Core): 256 KB
L3 Cache: 6 MB
Hyper-Threading Technology: Enabled
Memory: 8 GB
System Firmware Version: 1554.80.3.0.0 (iBridge: 18.16.14347.0.0,0)
Software:
System Software Overview:
System Version: macOS 11.2.3 (20D91)
Kernel Version: Darwin 20.3.0
Time since boot: 12 days 4:56
Graphics/Displays:
Intel Iris Plus Graphics 645:
Chipset Model: Intel Iris Plus Graphics 645
Type: GPU
Bus: Built-In
VRAM (Dynamic, Max): 1536 MB
Vendor: Intel
Device ID: 0x3ea6
Revision ID: 0x0001
Metal Family: Supported, Metal GPUFamily macOS 2
Displays:
Color LCD:
Display Type: Built-In Retina LCD
Resolution: 2560 x 1600 Retina
Framebuffer Depth: 30-Bit Color (ARGB2101010)
Main Display: Yes
Mirror: Off
Online: Yes
Automatically Adjust Brightness: Yes
Connection Type: Internal
S22E450:
Resolution: 1920 x 1080 (1080p FHD - Full High Definition)
UI Looks like: 1920 x 1080 @ 60.00Hz
Framebuffer Depth: 30-Bit Color (ARGB2101010)
Mirror: Off
Online: Yes
Rotation: Supported
Automatically Adjust Brightness: Yes
Connection Type: DVI or HDMI
Adapter Firmware Version: 7.55
PyQt version: 5.12.3
Compiled Qt version: 5.12.4
Runtime Qt version: 5.12.9
Installed Packages:
alabaster: 0.7.12
appdirs: 1.4.4
appnope: 0.1.0
Babel: 2.8.0
backcall: 0.2.0
blockdiag: 2.0.1
certifi: 2020.6.20
chardet: 3.0.4
ChimeraX-AddH: 2.1.3
ChimeraX-AlignmentAlgorithms: 2.0
ChimeraX-AlignmentHdrs: 3.2
ChimeraX-AlignmentMatrices: 2.0
ChimeraX-Alignments: 2.1
ChimeraX-Arrays: 1.0
ChimeraX-Atomic: 1.6.1
ChimeraX-AtomSearch: 2.0
ChimeraX-AxesPlanes: 2.0
ChimeraX-BasicActions: 1.1
ChimeraX-BILD: 1.0
ChimeraX-BlastProtein: 1.0.1
ChimeraX-BondRot: 2.0
ChimeraX-BugReporter: 1.0
ChimeraX-BuildStructure: 2.0
ChimeraX-Bumps: 1.0
ChimeraX-BundleBuilder: 1.0
ChimeraX-ButtonPanel: 1.0
ChimeraX-CageBuilder: 1.0
ChimeraX-CellPack: 1.0
ChimeraX-Centroids: 1.1
ChimeraX-ChemGroup: 2.0
ChimeraX-Clashes: 2.0
ChimeraX-ColorActions: 1.0
ChimeraX-ColorGlobe: 1.0
ChimeraX-CommandLine: 1.1.3
ChimeraX-ConnectStructure: 2.0
ChimeraX-Contacts: 1.0
ChimeraX-Core: 1.1.1
ChimeraX-CoreFormats: 1.0
ChimeraX-coulombic: 1.0.1
ChimeraX-Crosslinks: 1.0
ChimeraX-Crystal: 1.0
ChimeraX-DataFormats: 1.0
ChimeraX-Dicom: 1.0
ChimeraX-DistMonitor: 1.1
ChimeraX-DistUI: 1.0
ChimeraX-Dssp: 2.0
ChimeraX-EMDB-SFF: 1.0
ChimeraX-ExperimentalCommands: 1.0
ChimeraX-FileHistory: 1.0
ChimeraX-FunctionKey: 1.0
ChimeraX-Geometry: 1.1
ChimeraX-gltf: 1.0
ChimeraX-Graphics: 1.0
ChimeraX-Hbonds: 2.0
ChimeraX-Help: 1.0
ChimeraX-HKCage: 1.3
ChimeraX-IHM: 1.0
ChimeraX-ImageFormats: 1.0
ChimeraX-IMOD: 1.0
ChimeraX-IO: 1.0
ChimeraX-Label: 1.0
ChimeraX-ListInfo: 1.0
ChimeraX-Log: 1.1.1
ChimeraX-LookingGlass: 1.1
ChimeraX-Map: 1.0.1
ChimeraX-MapData: 2.0
ChimeraX-MapEraser: 1.0
ChimeraX-MapFilter: 2.0
ChimeraX-MapFit: 2.0
ChimeraX-MapSeries: 2.0
ChimeraX-Markers: 1.0
ChimeraX-Mask: 1.0
ChimeraX-MatchMaker: 1.1
ChimeraX-MDcrds: 2.0
ChimeraX-MedicalToolbar: 1.0.1
ChimeraX-Meeting: 1.0
ChimeraX-MLP: 1.0
ChimeraX-mmCIF: 2.2
ChimeraX-MMTF: 2.0
ChimeraX-Modeller: 1.0
ChimeraX-ModelPanel: 1.0
ChimeraX-ModelSeries: 1.0
ChimeraX-Mol2: 2.0
ChimeraX-Morph: 1.0
ChimeraX-MouseModes: 1.0
ChimeraX-Movie: 1.0
ChimeraX-Neuron: 1.0
ChimeraX-Nucleotides: 2.0
ChimeraX-OpenCommand: 1.2.1
ChimeraX-PDB: 2.1
ChimeraX-PDBBio: 1.0
ChimeraX-PickBlobs: 1.0
ChimeraX-Positions: 1.0
ChimeraX-PresetMgr: 1.0
ChimeraX-PubChem: 2.0
ChimeraX-Read-Pbonds: 1.0
ChimeraX-Registration: 1.1
ChimeraX-RemoteControl: 1.0
ChimeraX-ResidueFit: 1.0
ChimeraX-RestServer: 1.0
ChimeraX-RNALayout: 1.0
ChimeraX-RotamerLibMgr: 2.0
ChimeraX-RotamerLibsDunbrack: 2.0
ChimeraX-RotamerLibsDynameomics: 2.0
ChimeraX-RotamerLibsRichardson: 2.0
ChimeraX-SaveCommand: 1.2
ChimeraX-SchemeMgr: 1.0
ChimeraX-SDF: 2.0
ChimeraX-Segger: 1.0
ChimeraX-Segment: 1.0
ChimeraX-SeqView: 2.2
ChimeraX-Shape: 1.0.1
ChimeraX-Shell: 1.0
ChimeraX-Shortcuts: 1.0
ChimeraX-ShowAttr: 1.0
ChimeraX-ShowSequences: 1.0
ChimeraX-SideView: 1.0
ChimeraX-Smiles: 2.0
ChimeraX-SmoothLines: 1.0
ChimeraX-SpaceNavigator: 1.0
ChimeraX-StdCommands: 1.0.4
ChimeraX-STL: 1.0
ChimeraX-Storm: 1.0
ChimeraX-Struts: 1.0
ChimeraX-Surface: 1.0
ChimeraX-SwapAA: 2.0
ChimeraX-SwapRes: 2.0
ChimeraX-TapeMeasure: 1.0
ChimeraX-Test: 1.0
ChimeraX-Toolbar: 1.0
ChimeraX-ToolshedUtils: 1.0
ChimeraX-Tug: 1.0
ChimeraX-UI: 1.2.3
ChimeraX-uniprot: 2.0
ChimeraX-ViewDockX: 1.0
ChimeraX-Vive: 1.1
ChimeraX-VolumeMenu: 1.0
ChimeraX-VTK: 1.0
ChimeraX-WavefrontOBJ: 1.0
ChimeraX-WebCam: 1.0
ChimeraX-WebServices: 1.0
ChimeraX-Zone: 1.0
colorama: 0.4.3
comtypes: 1.1.7
cxservices: 1.0
cycler: 0.10.0
Cython: 0.29.20
decorator: 4.4.2
distlib: 0.3.1
docutils: 0.16
filelock: 3.0.12
funcparserlib: 0.3.6
grako: 3.16.5
h5py: 2.10.0
html2text: 2020.1.16
idna: 2.10
ihm: 0.16
imagecodecs: 2020.5.30
imagecodecs-lite: 2020.1.31
imagesize: 1.2.0
ipykernel: 5.3.0
ipython: 7.15.0
ipython-genutils: 0.2.0
jedi: 0.17.2
Jinja2: 2.11.2
jupyter-client: 6.1.3
jupyter-core: 4.6.3
kiwisolver: 1.2.0
line-profiler: 2.1.2
lxml: 4.5.1
MarkupSafe: 1.1.1
matplotlib: 3.2.1
msgpack: 1.0.0
netifaces: 0.10.9
networkx: 2.4
numexpr: 2.7.1
numpy: 1.18.5
numpydoc: 1.0.0
openvr: 1.12.501
packaging: 20.4
parso: 0.7.1
pexpect: 4.8.0
pickleshare: 0.7.5
Pillow: 7.1.2
pip: 20.2.2
pkginfo: 1.5.0.1
prompt-toolkit: 3.0.7
psutil: 5.7.0
ptyprocess: 0.6.0
pycollada: 0.7.1
pydicom: 2.0.0
Pygments: 2.6.1
PyOpenGL: 3.1.5
PyOpenGL-accelerate: 3.1.5
pyparsing: 2.4.7
PyQt5-commercial: 5.12.3
PyQt5-sip: 4.19.19
PyQtWebEngine-commercial: 5.12.1
python-dateutil: 2.8.1
pytz: 2020.1
pyzmq: 19.0.2
qtconsole: 4.7.4
QtPy: 1.9.0
RandomWords: 0.3.0
requests: 2.24.0
scipy: 1.4.1
setuptools: 49.4.0
sfftk-rw: 0.6.6.dev0
six: 1.15.0
snowballstemmer: 2.0.0
sortedcontainers: 2.2.2
Sphinx: 3.1.1
sphinxcontrib-applehelp: 1.0.2
sphinxcontrib-blockdiag: 2.0.0
sphinxcontrib-devhelp: 1.0.2
sphinxcontrib-htmlhelp: 1.0.3
sphinxcontrib-jsmath: 1.0.1
sphinxcontrib-qthelp: 1.0.3
sphinxcontrib-serializinghtml: 1.1.4
suds-jurko: 0.6
tables: 3.6.1
tifffile: 2020.6.3
tinyarray: 1.2.2
tornado: 6.0.4
traitlets: 5.0.4
urllib3: 1.25.10
wcwidth: 0.2.5
webcolors: 1.11.1
wheel: 0.34.2
Change History (2)
comment:1 by , 4 years ago
| Cc: | added |
|---|---|
| Component: | Unassigned → Core |
| Owner: | set to |
| Platform: | → all |
| Project: | → ChimeraX |
| Status: | new → accepted |
| Summary: | ChimeraX bug report submission → Trashed stack on Big Sur |
comment:2 by , 4 years ago
| Resolution: | → can't reproduce |
|---|---|
| Status: | accepted → closed |
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