![[ChimeraX Issue Tracking System]](/trac/ChimeraX/chrome/site/ChimeraX-icon.svg){kind=icon}
Opened 5 years ago
Closed 5 years ago
#4497 closed defect (can't reproduce)
Crash with trashed stack
| Reported by: | Owned by: | Eric Pettersen | |
|---|---|---|---|
| Priority: | normal | Milestone: | |
| Component: | Core | Version: | |
| Keywords: | Cc: | Tom Goddard | |
| Blocked By: | Blocking: | ||
| Notify when closed: | Platform: | all | |
| Project: | ChimeraX |
Description
The following bug report has been submitted:
Platform: Darwin-20.3.0-x86_64-i386-64bit
ChimeraX Version: 1.1.1 (2020-10-07 08:32:49 UTC)
Description
Last time you used ChimeraX it crashed.
Please describe steps that led to the crash here.
Process: ChimeraX [9424]
Path: /private/var/folders/*/ChimeraX-1.1.1.app/Contents/MacOS/ChimeraX
Identifier: edu.ucsf.cgl.ChimeraX
Version: 1.1.1 (1.1.1.0)
Code Type: X86-64 (Native)
Parent Process: ??? [1]
Responsible: ChimeraX [9424]
User ID: 501
Date/Time: 2021-04-05 13:57:35.160 -0700
OS Version: macOS 11.2.2 (20D80)
Report Version: 12
Bridge OS Version: 5.2 (18P4347)
Anonymous UUID: 39E36BC6-82F2-D623-89A1-2ED15AEF0DCE
Sleep/Wake UUID: E59968B9-E693-4C0A-94A2-9CF1F3C818B9
Time Awake Since Boot: 620000 seconds
Time Since Wake: 10000 seconds
System Integrity Protection: enabled
Crashed Thread: 0 CrBrowserMain
Exception Type: EXC_BAD_ACCESS (SIGILL)
Exception Codes: KERN_MEMORY_ERROR at 0x000000010f57b080
Exception Note: EXC_CORPSE_NOTIFY
Termination Signal: Illegal instruction: 4
Termination Reason: Namespace SIGNAL, Code 0x4
Terminating Process: ChimeraX [9424]
VM Regions Near 0x10f57b080:
shared memory 10f3db000-10f3dc000 [ 4K] r--/r-- SM=SHM
--> mapped file 10f3dc000-10f5d8000 [ 2032K] r-x/rwx SM=COW Object_id=183304c7
mapped file 10f5d8000-10f63d000 [ 404K] rw-/rwx SM=COW Object_id=1c11acc7
Thread 0 Crashed:: CrBrowserMain
0 ??? 0x000000010f57b080 0 + 4552372352
1 ??? 0x0000020000000200 0 + 2199023256064
2 ??? 0x0000020000000200 0 + 2199023256064
3 ??? 0x0000004000000040 0 + 274877907008
4 ??? 0x0000080000000800 0 + 8796093024256
5 ??? 0x0000000400000006 0 + 17179869190
6 ??? 0x00000080000000c0 0 + 549755814080
7 ChimeraX 000000000000000000 0 + 0
8 ??? 0x0000010000000100 0 + 1099511628032
9 ChimeraX 000000000000000000 0 + 0
10 ChimeraX 000000000000000000 0 + 0
11 ??? 0x1000000010000000 0 + 1152921504875282432
12 ChimeraX 000000000000000000 0 + 0
13 ??? 0x00000001262d5e30 0 + 4935474736
14 ??? 0x0000006900000068 0 + 450971566184
15 ??? 0x0284830000007fb6 0 + 181413921024933814
16 ??? 0x0000006100000072 0 + 416611827826
17 ??? 0x7269662065687420 0 + 8244232882204734496
18 ??? 0x20200a6e6920656e 0 + 2314861677794846062
19 ??? 0x200a0a2e676e6967 0 + 2308668953400863079
20 ??? 0x000000010f5f7c50 0 + 4552883280
21 ChimeraX 000000000000000000 0 + 0
22 ??? 0x000000010f7ed910 0 + 4554938640
23 ??? 0x000000010f7e0030 0 + 4554883120
24 ChimeraX 000000000000000000 0 + 0
25 ChimeraX 000000000000000000 0 + 0
26 ??? 0x000000010f4531d0 0 + 4551160272
27 ??? 0x0000002d00000038 0 + 193273528376
28 ??? 0x0000006900000068 0 + 450971566184
29 ??? 0x0000002f00000036 0 + 201863462966
30 ??? 0x000000740000006e 0 + 498216206446
31 ??? 0x0000006100000072 0 + 416611827826
32 ??? 0x0000007000000070 0 + 481036337264
33 ChimeraX 000000000000000000 0 + 0
34 ??? 0x6e69746e656d656c 0 + 7956018234223584620
35 ??? 0x7373616c635f5f28 0 + 8319100054834994984
36 ??? 0x2064656c6c616320 0 + 2334102023233954592
37 ChimeraX 000000000000000000 0 + 0
38 ??? 0x000000010f758080 0 + 4554326144
39 ??? 0xb3db4b8a2e81e412 0 + 12960035409546568722
40 ChimeraX 000000000000000000 0 + 0
41 ??? 0x000000010f756230 0 + 4554318384
42 ??? 0x4bbda48ca83774e9 0 + 5457699247467492585
43 ??? 0x000000010f59b0d2 0 + 4552503506
44 ??? 0x0483047c037c027c 0 + 325108528781722236
45 ??? 0x000000010f63d9c0 0 + 4553169344
46 ??? 0x0000000000000001 0 + 1
47 ??? 0x000060000131f270 0 + 105553136317040
48 ??? 0x676e696562202020 0 + 7453010317503635488
49 ChimeraX 000000000000000000 0 + 0
50 ChimeraX 000000000000000000 0 + 0
51 ChimeraX 000000000000000000 0 + 0
52 ChimeraX 000000000000000000 0 + 0
53 ??? 0x000000010f7c65f0 0 + 4554778096
54 ChimeraX 000000000000000000 0 + 0
55 ??? 0x7265687469652064 0 + 8243109542165291108
56 ??? 0x000000010f7948c0 0 + 4554574016
57 ChimeraX 000000000000000000 0 + 0
58 ??? 0x43e57565eb46a630 0 + 4892445650807334448
59 ??? 0x000000010f5fec40 0 + 4552911936
60 ??? 0x0000000000000004 0 + 4
61 ??? 0x6372612070695a20 0 + 7165896749052680736
62 ChimeraX 000000000000000000 0 + 0
63 ChimeraX 000000000000000000 0 + 0
64 ChimeraX 000000000000000000 0 + 0
65 ChimeraX 000000000000000000 0 + 0
66 ??? 0x000000010f7f3500 0 + 4554962176
67 ??? 0x000000010f7f95f0 0 + 4554986992
68 ??? 0x000000010f7f7b30 0 + 4554980144
69 ??? 0x000000010f8044b0 0 + 4555031728
70 ChimeraX 000000000000000000 0 + 0
71 ??? 0x000000010f759970 0 + 4554332528
72 ??? 0x43e57565eb46a630 0 + 4892445650807334448
73 ChimeraX 000000000000000000 0 + 0
74 ??? 0x000000010f8a09e0 0 + 4555672032
75 ??? 0x7065656b206f7420 0 + 8098991015675786272
76 ??? 0x6572612073726574 0 + 7310011937179460980
77 ??? 0x000000010f5fac70 0 + 4552895600
78 ??? 0x2020202020200a74 0 + 2314885530818447988
79 ChimeraX 000000000000000000 0 + 0
80 ChimeraX 000000000000000000 0 + 0
81 ChimeraX 000000000000000000 0 + 0
82 ??? 0x000000010f451220 0 + 4551152160
83 ChimeraX 000000000000000000 0 + 0
84 ??? 0x000000010f82e390 0 + 4555203472
85 ChimeraX 000000000000000000 0 + 0
86 ??? 0x30f7676cd67f6e9d 0 + 3528402550220877469
87 ChimeraX 000000000000000000 0 + 0
88 ??? 0x000000010f834500 0 + 4555228416
89 ChimeraX 000000000000000000 0 + 0
90 ChimeraX 000000000000000000 0 + 0
91 ChimeraX 000000000000000000 0 + 0
92 ChimeraX 000000000000000000 0 + 0
93 ??? 0x000000010f5fa670 0 + 4552894064
94 ChimeraX 000000000000000000 0 + 0
95 ChimeraX 000000000000000000 0 + 0
96 ChimeraX 000000000000000000 0 + 0
97 ??? 0x000000010f451430 0 + 4551152688
98 ChimeraX 000000000000000000 0 + 0
99 ChimeraX 000000000000000000 0 + 0
100 ??? 0x000000010f8698e0 0 + 4555446496
101 ChimeraX 000000000000000000 0 + 0
102 ChimeraX 000000000000000000 0 + 0
103 ChimeraX 000000000000000000 0 + 0
104 ??? 0x0000000000101601 0 + 1054209
105 ??? 0xffff0d0409feffff 0 + 18446476909731577855
106 ??? 0x000000010f45aad0 0 + 4551191248
107 ??? 0x000000010f458820 0 + 4551182368
108 ??? 0x000000010f756050 0 + 4554317904
109 ChimeraX 000000000000000000 0 + 0
110 ChimeraX 000000000000000000 0 + 0
111 ChimeraX 000000000000000000 0 + 0
112 ??? 0x657269642064656e 0 + 7310021023936832878
113 ChimeraX 000000000000000000 0 + 0
114 ChimeraX 000000000000000000 0 + 0
115 ??? 0x000000010f7599b0 0 + 4554332592
116 ??? 0x000000010f43d620 0 + 4551071264
117 ??? 0x0000000000000006 0 + 6
118 ??? 0x726574692068742d 0 + 8243122687835665453
119 ??? 0x000000010f92c2f0 0 + 4556243696
120 ChimeraX 000000000000000000 0 + 0
121 ??? 0x000000010f5fa670 0 + 4552894064
122 ChimeraX 000000000000000000 0 + 0
123 ??? 0xf87e3c762649f47d 0 + 17905815646617859197
124 ??? 0x000000010f91aae0 0 + 4556172000
125 ChimeraX 000000000000000000 0 + 0
126 ChimeraX 000000000000000000 0 + 0
127 ChimeraX 000000000000000000 0 + 0
128 ??? 0x206572612073746e 0 + 2334397743343301742
129 ??? 0x000000010f90fd70 0 + 4556127600
130 ??? 0x0000000100202020 0 + 4297072672
131 ??? 0x76656c2065687420 0 + 8531343955519370272
132 ChimeraX 000000000000000000 0 + 0
133 ??? 0x0000000125bfac7d 0 + 4928285821
134 ??? 0x0000000000000020 0 + 32
135 ??? 0x000000010f45a410 0 + 4551189520
136 ??? 0x000000010f4513a0 0 + 4551152544
137 ChimeraX 000000000000000000 0 + 0
138 ??? 0x000000010f451220 0 + 4551152160
139 ChimeraX 000000000000000000 0 + 0
140 ??? 0x000000010f9490f0 0 + 4556361968
141 ChimeraX 000000000000000000 0 + 0
142 ChimeraX 000000000000000000 0 + 0
143 ChimeraX 000000000000000000 0 + 0
144 ChimeraX 000000000000000000 0 + 0
145 ChimeraX 000000000000000000 0 + 0
146 ??? 0x00007fb633d08bb0 0 + 140420530080688
147 ??? 0x6120736574796220 0 + 6998720700516753952
148 ??? 0x696620797261726f 0 + 7594793527589040751
149 ??? 0x027c057c00579c71 0 + 179024115327802481
150 ChimeraX 000000000000000000 0 + 0
151 ChimeraX 000000000000000000 0 + 0
152 ChimeraX 000000000000000000 0 + 0
153 ChimeraX 000000000000000000 0 + 0
154 ??? 0x000000010f759430 0 + 4554331184
155 ??? 0x017d0017057c017c 0 + 107242065003020668
156 ??? 0x0000000000000002 0 + 2
157 ChimeraX 000000000000000000 0 + 0
158 ChimeraX 000000000000000000 0 + 0
159 ??? 0x000000010f78c3b0 0 + 4554539952
160 ??? 0x0110010a01040212 0 + 76562336143639058
161 ??? 0x0019028500640564 0 + 7039644678227300
162 ChimeraX 000000000000000000 0 + 0
163 ChimeraX 000000000000000000 0 + 0
164 ??? 0x62775b2c676e6972 0 + 7095239984217483634
165 ChimeraX 000000000000000000 0 + 0
166 ??? 0x7274732020202020 0 + 8247343399437344800
167 ??? 0x6946325a42206120 0 + 7585805985590042912
168 ??? 0x000000010fa01fd0 0 + 4557119440
169 ??? 0x000000010f758cb0 0 + 4554329264
170 ??? 0x7320726f6620776f 0 + 8295756336396793711
171 ??? 0x206e6f6974706563 0 + 2336927755367638371
172 ??? 0x017d00020c7c00a1 0 + 107241974926147745
173 ChimeraX 000000000000000000 0 + 0
174 ChimeraX 000000000000000000 0 + 0
175 ??? 0x00007fb633c3a130 0 + 140420529234224
176 ChimeraX 000000000000000000 0 + 0
177 ??? 0x000000010fe38b70 0 + 4561537904
178 ChimeraX 000000000000000000 0 + 0
179 ChimeraX 000000000000000000 0 + 0
180 ChimeraX 000000000000000000 0 + 0
181 ChimeraX 000000000000000000 0 + 0
182 ??? 0x000000010fe3c890 0 + 4561553552
183 ??? 0x000000010f45a410 0 + 4551189520
184 ChimeraX 000000000000000000 0 + 0
185 ChimeraX 000000000000000000 0 + 0
186 ??? 0x000000010fac3230 0 + 4557910576
187 ??? 0x000000010fe44fa0 0 + 4561588128
188 ??? 0x0c21b644c051f9cc 0 + 874180209087216076
189 ??? 0x000000010fe3cb70 0 + 4561554288
190 ??? 0x422e4122202c2243 0 + 4768820670256390723
191 ChimeraX 000000000000000000 0 + 0
192 ChimeraX 000000000000000000 0 + 0
193 ??? 0x000000010f501eb0 0 + 4551876272
194 ChimeraX 000000000000000000 0 + 0
195 ??? 0x000000010f5f7c50 0 + 4552883280
196 ChimeraX 000000000000000000 0 + 0
197 ??? 0x6669746e65646920 0 + 7379557481919572256
198 ??? 0x000000010f451380 0 + 4551152512
199 ??? 0x0000000000000020 0 + 32
200 ??? 0x001c420500000ef8 0 + 7953888590171896
201 ChimeraX 000000000000000000 0 + 0
202 ??? 0x756f79202c73726f 0 + 8462115403944129135
203 ??? 0x000000010ffb1f80 0 + 4563083136
204 ??? 0x000000010fedcf30 0 + 4562210608
205 ??? 0x6c6176206d756d69 0 + 7809653110484594025
206 ??? 0x000000010f4513a0 0 + 4551152544
207 ??? 0x72207469622d3820 0 + 8223700915546044448
208 ChimeraX 000000000000000000 0 + 0
209 ChimeraX 000000000000000000 0 + 0
210 ??? 0x9b5bce0b120c44ce 0 + 11194767845702255822
211 ??? 0x000000010ffa9a30 0 + 4563049008
212 ??? 0x00000000a80ee206 0 + 2819547654
213 ChimeraX 000000000000000000 0 + 0
214 ??? 0x000000010f44a8a0 0 + 4551125152
215 ChimeraX 000000000000000000 0 + 0
216 ??? 0x202020200a676e69 0 + 2314885530454027881
217 ??? 0x000000010f44a8a0 0 + 4551125152
218 ChimeraX 000000000000000000 0 + 0
219 ??? 0xb6842036cc689d94 0 + 13151672231558421908
220 ??? 0x0000000110075b70 0 + 4563884912
221 ??? 0x000000010ff07030 0 + 4562382896
222 ChimeraX 000000000000000000 0 + 0
223 ??? 0x00007fb633c4a030 0 + 140420529299504
224 ChimeraX 000000000000000000 0 + 0
225 ChimeraX 000000000000000000 0 + 0
226 ??? 0x700007fb633c3b70 0 + 8070459308531006320
227 ??? 0x666665206e692029 0 + 7378696229458878505
228 ChimeraX 000000000000000000 0 + 0
229 ChimeraX 000000000000000000 0 + 0
230 ChimeraX 000000000000000000 0 + 0
231 ChimeraX 000000000000000000 0 + 0
232 ??? 0x6120657275746365 0 + 6998705363204989797
233 ChimeraX 000000000000000000 0 + 0
234 ??? 0x097d02830b64097c 0 + 683705480285260156
235 ??? 0x017c09a0007c0182 0 + 106971073957593474
236 ??? 0x0c7d001602660c7c 0 + 899875595073490044
237 ChimeraX 000000000000000000 0 + 0
238 ??? 0x000000010f5f3f58 0 + 4552867672
239 ChimeraX 000000000000000000 0 + 0
240 ChimeraX 000000000000000000 0 + 0
241 ChimeraX 000000000000000000 0 + 0
242 ??? 0x00000001102a7a60 0 + 4566186592
243 ??? 0x000000010f45d200 0 + 4551201280
244 ChimeraX 000000000000000000 0 + 0
245 ??? 0x02a1067c08640ba0 0 + 189439789112757152
246 ??? 0x63756d2073612068 0 + 7166754368172138600
247 ??? 0x036400a0097cb872 0 + 244320967138785394
248 ??? 0xc223b2048c878634 0 + 13989220600150197812
249 ??? 0x000000010ff33f10 0 + 4562566928
250 ??? 0x636564207962202e 0 + 7162240873040846894
251 ??? 0x6c6f662f7261762f 0 + 7813576232479585839
252 ChimeraX 000000000000000000 0 + 0
253 ??? 0x6966206574616369 0 + 7594793441723245417
254 ??? 0x2072656c646e6168 0 + 2338042672774537576
255 ChimeraX 000000000000000000 0 + 0
256 ChimeraX 000000000000000000 0 + 0
257 ??? 0x066401a10c6415a0 0 + 460494853107881376
258 ChimeraX 000000000000000000 0 + 0
259 ChimeraX 000000000000000000 0 + 0
260 ??? 0x000000011036e310 0 + 4566999824
261 ChimeraX 000000000000000000 0 + 0
262 ??? 0x000000011031e0f0 0 + 4566671600
263 ChimeraX 000000000000000000 0 + 0
264 ChimeraX 000000000000000000 0 + 0
265 ChimeraX 000000000000000000 0 + 0
266 ChimeraX 000000000000000000 0 + 0
267 ??? 0x000000010f5fa6f0 0 + 4552894192
268 ??? 0x726f662073646f68 0 + 8245921732299616104
269 ??? 0x0000000110343200 0 + 4566823424
270 ??? 0x6568742065636e69 0 + 7307218077897420393
271 ??? 0x000000010f43d620 0 + 4551071264
Thread 1:
0 ??? 0x00007fff205ad8e2 0 + 140733736212706
1 ??? 0x0000000110d38c3b 0 + 4577266747
2 ??? 0x00007fff205df950 0 + 140733736417616
3 ??? 0x00007fff205db47b 0 + 140733736399995
Thread 2:
0 ??? 0x00007fff205ad8e2 0 + 140733736212706
1 ??? 0x0000000110d38c3b 0 + 4577266747
2 ??? 0x00007fff205df950 0 + 140733736417616
3 ??? 0x00007fff205db47b 0 + 140733736399995
Thread 3:
0 ??? 0x00007fff205ad8e2 0 + 140733736212706
1 ??? 0x0000000110d38c3b 0 + 4577266747
2 ??? 0x00007fff205df950 0 + 140733736417616
3 ??? 0x00007fff205db47b 0 + 140733736399995
Thread 4:: com.apple.NSEventThread
0 ??? 0x00007fff205aae7e 0 + 140733736201854
1 ??? 0x00007fff205ab1f0 0 + 140733736202736
2 ??? 0x00007fff206d7bf7 0 + 140733737434103
3 ??? 0x00007fff206d62ca 0 + 140733737427658
4 ??? 0x00007fff206d56ce 0 + 140733737424590
5 ??? 0x00007fff2307b7c6 0 + 140733781096390
6 ??? 0x00007fff205df950 0 + 140733736417616
7 ??? 0x00007fff205db47b 0 + 140733736399995
Thread 5:: NetworkConfigWatcher
0 ??? 0x00007fff205aae7e 0 + 140733736201854
1 ??? 0x00007fff205ab1f0 0 + 140733736202736
2 ??? 0x0000000121e6232d 0 + 4863697709
3 ??? 0x0000000121e6222f 0 + 4863697455
4 ??? 0x0000000121e1605d 0 + 4863385693
5 ??? 0x0000000121e3f085 0 + 4863553669
6 ??? 0x0000000121e919bc 0 + 4863891900
7 ??? 0x0000000121ed1717 0 + 4864153367
8 ??? 0x00007fff205df950 0 + 140733736417616
9 ??? 0x00007fff205db47b 0 + 140733736399995
Thread 6:: DnsConfigService
0 ??? 0x00007fff205af7e2 0 + 140733736220642
1 ??? 0x0000000122120cbd 0 + 4866575549
2 ??? 0x0000000121ed7cdc 0 + 4864179420
3 ??? 0x0000000121e3f085 0 + 4863553669
4 ??? 0x0000000121e919bc 0 + 4863891900
5 ??? 0x0000000121ed1717 0 + 4864153367
6 ??? 0x00007fff205df950 0 + 140733736417616
7 ??? 0x00007fff205db47b 0 + 140733736399995
Thread 7:: TaskSchedulerServiceThread
0 ??? 0x00007fff205af7e2 0 + 140733736220642
1 ??? 0x0000000122120cbd 0 + 4866575549
2 ??? 0x0000000121ed7cc4 0 + 4864179396
3 ??? 0x0000000121e3f085 0 + 4863553669
4 ??? 0x0000000121e80a74 0 + 4863822452
5 ??? 0x0000000121e919bc 0 + 4863891900
6 ??? 0x0000000121ed1717 0 + 4864153367
7 ??? 0x00007fff205df950 0 + 140733736417616
8 ??? 0x00007fff205db47b 0 + 140733736399995
Thread 8:: TaskSchedulerForegroundWorker
0 ??? 0x00007fff205aae7e 0 + 140733736201854
1 ??? 0x00007fff205ab1f0 0 + 140733736202736
2 ??? 0x0000000121e6232d 0 + 4863697709
3 ??? 0x0000000121e62421 0 + 4863697953
4 ??? 0x0000000121e79d28 0 + 4863794472
5 ??? 0x0000000121e7a65b 0 + 4863796827
6 ??? 0x0000000121e7a2c4 0 + 4863795908
7 ??? 0x0000000121ed1717 0 + 4864153367
8 ??? 0x00007fff205df950 0 + 140733736417616
9 ??? 0x00007fff205db47b 0 + 140733736399995
Thread 9:: TaskSchedulerForegroundBlockingWorker
0 ??? 0x00007fff205aae7e 0 + 140733736201854
1 ??? 0x00007fff205ab1f0 0 + 140733736202736
2 ??? 0x0000000121e6232d 0 + 4863697709
3 ??? 0x0000000121e62421 0 + 4863697953
4 ??? 0x0000000121e79d28 0 + 4863794472
5 ??? 0x0000000121e7a65b 0 + 4863796827
6 ??? 0x0000000121e7a2c4 0 + 4863795908
7 ??? 0x0000000121ed1717 0 + 4864153367
8 ??? 0x00007fff205df950 0 + 140733736417616
9 ??? 0x00007fff205db47b 0 + 140733736399995
Thread 10:: TaskSchedulerBackgroundWorker
0 ??? 0x00007fff205aae7e 0 + 140733736201854
1 ??? 0x00007fff205ab1f0 0 + 140733736202736
2 ??? 0x0000000121e6232d 0 + 4863697709
3 ??? 0x0000000121e62421 0 + 4863697953
4 ??? 0x0000000121e79d28 0 + 4863794472
5 ??? 0x0000000121e7a65b 0 + 4863796827
6 ??? 0x0000000121e7a234 0 + 4863795764
7 ??? 0x0000000121ed1717 0 + 4864153367
8 ??? 0x00007fff205df950 0 + 140733736417616
9 ??? 0x00007fff205db47b 0 + 140733736399995
Thread 11:: TaskSchedulerBackgroundBlockingWorker
0 ??? 0x00007fff205aae7e 0 + 140733736201854
1 ??? 0x00007fff205ab1f0 0 + 140733736202736
2 ??? 0x0000000121e6232d 0 + 4863697709
3 ??? 0x0000000121e62421 0 + 4863697953
4 ??? 0x0000000121e79d28 0 + 4863794472
5 ??? 0x0000000121e7a65b 0 + 4863796827
6 ??? 0x0000000121e7a234 0 + 4863795764
7 ??? 0x0000000121ed1717 0 + 4864153367
8 ??? 0x00007fff205df950 0 + 140733736417616
9 ??? 0x00007fff205db47b 0 + 140733736399995
Thread 12:: Chrome_IOThread
0 ??? 0x00007fff205af7e2 0 + 140733736220642
1 ??? 0x0000000122120cbd 0 + 4866575549
2 ??? 0x0000000121ed7cc4 0 + 4864179396
3 ??? 0x0000000121e3f085 0 + 4863553669
4 ??? 0x00000001217adfe4 0 + 4856668132
5 ??? 0x0000000121e919bc 0 + 4863891900
6 ??? 0x0000000121ed1717 0 + 4864153367
7 ??? 0x00007fff205df950 0 + 140733736417616
8 ??? 0x00007fff205db47b 0 + 140733736399995
Thread 13:: TaskSchedulerSingleThreadSharedBackgroundBlocking0
0 ??? 0x00007fff205aae7e 0 + 140733736201854
1 ??? 0x00007fff205ab1f0 0 + 140733736202736
2 ??? 0x0000000121e6232d 0 + 4863697709
3 ??? 0x0000000121e6222f 0 + 4863697455
4 ??? 0x0000000121e79d1a 0 + 4863794458
5 ??? 0x0000000121e7a3bf 0 + 4863796159
6 ??? 0x0000000121e7a264 0 + 4863795812
7 ??? 0x0000000121ed1717 0 + 4864153367
8 ??? 0x00007fff205df950 0 + 140733736417616
9 ??? 0x00007fff205db47b 0 + 140733736399995
Thread 14:: CompositorTileWorker1/59395
0 ??? 0x00007fff205ad8e2 0 + 140733736212706
1 ??? 0x0000000121ecffa8 0 + 4864147368
2 ??? 0x0000000122e564c8 0 + 4880426184
3 ??? 0x0000000121e90694 0 + 4863886996
4 ??? 0x0000000121ed1717 0 + 4864153367
5 ??? 0x00007fff205df950 0 + 140733736417616
6 ??? 0x00007fff205db47b 0 + 140733736399995
Thread 15:: AudioThread
0 ??? 0x00007fff205aae7e 0 + 140733736201854
1 ??? 0x00007fff205ab1f0 0 + 140733736202736
2 ??? 0x0000000121e6232d 0 + 4863697709
3 ??? 0x0000000121e6222f 0 + 4863697455
4 ??? 0x0000000121e1605d 0 + 4863385693
5 ??? 0x0000000121e3f085 0 + 4863553669
6 ??? 0x0000000121e919bc 0 + 4863891900
7 ??? 0x0000000121ed1717 0 + 4864153367
8 ??? 0x00007fff205df950 0 + 140733736417616
9 ??? 0x00007fff205db47b 0 + 140733736399995
Thread 16:: Chrome_InProcGpuThread
0 ??? 0x00007fff205aae7e 0 + 140733736201854
1 ??? 0x00007fff205ab1f0 0 + 140733736202736
2 ??? 0x0000000121e6232d 0 + 4863697709
3 ??? 0x0000000121e16052 0 + 4863385682
4 ??? 0x0000000121e3f085 0 + 4863553669
5 ??? 0x0000000121e919bc 0 + 4863891900
6 ??? 0x0000000121ed1717 0 + 4864153367
7 ??? 0x00007fff205df950 0 + 140733736417616
8 ??? 0x00007fff205db47b 0 + 140733736399995
Thread 17:: Chrome_ChildIOThread
0 ??? 0x00007fff205af7e2 0 + 140733736220642
1 ??? 0x0000000122120cbd 0 + 4866575549
2 ??? 0x0000000121ed7cdc 0 + 4864179420
3 ??? 0x0000000121e3f085 0 + 4863553669
4 ??? 0x0000000121e919bc 0 + 4863891900
5 ??? 0x0000000121ed1717 0 + 4864153367
6 ??? 0x00007fff205df950 0 + 140733736417616
7 ??? 0x00007fff205db47b 0 + 140733736399995
Thread 18:: NetworkConfigWatcher
0 ??? 0x00007fff205aae7e 0 + 140733736201854
1 ??? 0x00007fff205ab1f0 0 + 140733736202736
2 ??? 0x0000000121e6232d 0 + 4863697709
3 ??? 0x0000000121e6222f 0 + 4863697455
4 ??? 0x0000000121e1605d 0 + 4863385693
5 ??? 0x0000000121e3f085 0 + 4863553669
6 ??? 0x0000000121e919bc 0 + 4863891900
7 ??? 0x0000000121ed1717 0 + 4864153367
8 ??? 0x00007fff205df950 0 + 140733736417616
9 ??? 0x00007fff205db47b 0 + 140733736399995
Thread 19:: TaskSchedulerSingleThreadForegroundBlocking1
0 ??? 0x00007fff205aae7e 0 + 140733736201854
1 ??? 0x00007fff205ab1f0 0 + 140733736202736
2 ??? 0x0000000121e6232d 0 + 4863697709
3 ??? 0x0000000121e6222f 0 + 4863697455
4 ??? 0x0000000121e79d1a 0 + 4863794458
5 ??? 0x0000000121e7a65b 0 + 4863796827
6 ??? 0x0000000121e7a324 0 + 4863796004
7 ??? 0x0000000121ed1717 0 + 4864153367
8 ??? 0x00007fff205df950 0 + 140733736417616
9 ??? 0x00007fff205db47b 0 + 140733736399995
Thread 20:: NetworkConfigWatcher
0 ??? 0x00007fff205aae7e 0 + 140733736201854
1 ??? 0x00007fff205ab1f0 0 + 140733736202736
2 ??? 0x0000000121e6232d 0 + 4863697709
3 ??? 0x0000000121e6222f 0 + 4863697455
4 ??? 0x0000000121e1605d 0 + 4863385693
5 ??? 0x0000000121e3f085 0 + 4863553669
6 ??? 0x0000000121e919bc 0 + 4863891900
7 ??? 0x0000000121ed1717 0 + 4864153367
8 ??? 0x00007fff205df950 0 + 140733736417616
9 ??? 0x00007fff205db47b 0 + 140733736399995
Thread 21:
0 ??? 0x00007fff205db458 0 + 140733736399960
Thread 22:
0 ??? 0x00007fff205db458 0 + 140733736399960
Thread 0 crashed with X86 Thread State (64-bit):
rax: 0x000000010f57b080 rbx: 0x00007fb633c006e0 rcx: 0x00007fb633c00678 rdx: 0x00007fb633c006e0
rdi: 0x000000000000000a rsi: 0x00007fb633c00678 rbp: 0x00007fb633c00250 rsp: 0x00007fb633c00248
r8: 0x00007fb633c006e0 r9: 0x779d59df1a756e8b r10: 0x0000000000000000 r11: 0x00000000ffffff00
r12: 0x779d59df1a756e8b r13: 0x0000600002c41c20 r14: 0x0000000000000040 r15: 0x0000000000000000
rip: 0x000000010f57b080 rfl: 0x0000000000010206 cr2: 0x000000010f57b080
Logical CPU: 7
Error Code: 0x00000014 (no mapping for user instruction read)
Trap Number: 14
Thread 0 instruction stream not available.
Thread 0 last branch register state not available.
Binary Images:
0 - 0xffffffffffffffff +ChimeraX (???) /private/var/folders/*/ChimeraX-1.1.1.app/Contents/MacOS/ChimeraX
0x11dfcb000 - 0x11e066fff dyld (832.7.3) /usr/lib/dyld
External Modification Summary:
Calls made by other processes targeting this process:
task_for_pid: 17
thread_create: 0
thread_set_state: 0
Calls made by this process:
task_for_pid: 0
thread_create: 0
thread_set_state: 0
Calls made by all processes on this machine:
task_for_pid: 514874
thread_create: 0
thread_set_state: 0
VM Region Summary:
ReadOnly portion of Libraries: Total=848K resident=0K(0%) swapped_out_or_unallocated=848K(100%)
Writable regions: Total=934.3M written=0K(0%) resident=0K(0%) swapped_out=0K(0%) unallocated=934.3M(100%)
VIRTUAL REGION
REGION TYPE SIZE COUNT (non-coalesced)
=========== ======= =======
Accelerate framework 128K 1
Activity Tracing 256K 1
CG backing stores 4320K 12
CG image 156K 7
CoreAnimation 72K 10
CoreGraphics 16K 3
CoreUI image data 2044K 15
Foundation 36K 2
Kernel Alloc Once 8K 1
MALLOC 265.4M 261
MALLOC guard page 32K 8
MALLOC_LARGE (reserved) 384K 1 reserved VM address space (unallocated)
MALLOC_NANO (reserved) 384.0M 1 reserved VM address space (unallocated)
OpenGL GLSL 512K 6
STACK GUARD 88K 22
Stack 139.2M 23
Stack Guard 56.0M 1
VM_ALLOCATE 43.3M 248
VM_ALLOCATE (reserved) 96.0M 1 reserved VM address space (unallocated)
__DATA 224K 2
__DATA_CONST 32K 1
__LINKEDIT 240K 2
__TEXT 624K 1
dylib 1684K 24
dylib (reserved) 64K 5 reserved VM address space (unallocated)
mapped file 335.3M 418
shared memory 52K 7
=========== ======= =======
TOTAL 1.3G 1084
TOTAL, minus reserved VM space 849.4M 1084
System Profile:
Network Service: USB 10/100/1000 LAN, Ethernet, en5
Network Service: Wi-Fi, AirPort, en0
bridge_os_version: Bridge OS 5.2 (18P4347)
Boot Volume File System Type: apfs
bridge_model: iBridge2,10
Memory Module: BANK 0/ChannelA-DIMM0, 4 GB, LPDDR3, 2133 MHz, Samsung, K4E6E304EC-EGCG
Memory Module: BANK 2/ChannelB-DIMM0, 4 GB, LPDDR3, 2133 MHz, Samsung, K4E6E304EC-EGCG
USB Device: USB 3.1 Bus
USB Device: Anker USB-C Hub Device
USB Device: 2.4G Receiver
USB Device: USB Live camera
USB Device: Anker
USB Device: Anker USB-C Hub Device
USB Device: USB3.0 Card Reader
USB Device: USB 10/100/1000 LAN
USB Device: Apple T2 Bus
USB Device: Touch Bar Backlight
USB Device: Touch Bar Display
USB Device: Apple Internal Keyboard / Trackpad
USB Device: Headset
USB Device: Ambient Light Sensor
USB Device: FaceTime HD Camera (Built-in)
USB Device: Apple T2 Controller
Thunderbolt Bus: MacBook Pro, Apple Inc., 63.5
Model: MacBookPro15,4, BootROM 1554.80.3.0.0 (iBridge: 18.16.14347.0.0,0), 4 processors, Quad-Core Intel Core i5, 1.4 GHz, 8 GB, SMC
Graphics: kHW_IntelIrisGraphics645Item, Intel Iris Plus Graphics 645, spdisplays_builtin
AirPort: spairport_wireless_card_type_airport_extreme, wl0: Dec 9 2020 01:09:28 version 16.20.293.6.3.6.96 FWID 01-72ab9dcc
Bluetooth: Version 8.0.3d9, 3 services, 18 devices, 1 incoming serial ports
Log:
UCSF ChimeraX version: 1.1.1 (2020-10-07)
© 2016-2020 Regents of the University of California. All rights reserved.
How to cite UCSF ChimeraX
OpenGL version: 4.1 INTEL-16.1.11
OpenGL renderer: Intel(R) Iris(TM) Plus Graphics 645
OpenGL vendor: Intel Inc.Hardware:
Hardware Overview:
Model Name: MacBook Pro
Model Identifier: MacBookPro15,4
Processor Name: Quad-Core Intel Core i5
Processor Speed: 1.4 GHz
Number of Processors: 1
Total Number of Cores: 4
L2 Cache (per Core): 256 KB
L3 Cache: 6 MB
Hyper-Threading Technology: Enabled
Memory: 8 GB
System Firmware Version: 1554.80.3.0.0 (iBridge: 18.16.14347.0.0,0)
Software:
System Software Overview:
System Version: macOS 11.2.2 (20D80)
Kernel Version: Darwin 20.3.0
Time since boot: 25 days 17:35
Graphics/Displays:
Intel Iris Plus Graphics 645:
Chipset Model: Intel Iris Plus Graphics 645
Type: GPU
Bus: Built-In
VRAM (Dynamic, Max): 1536 MB
Vendor: Intel
Device ID: 0x3ea6
Revision ID: 0x0001
Metal Family: Supported, Metal GPUFamily macOS 2
Displays:
Color LCD:
Display Type: Built-In Retina LCD
Resolution: 2560 x 1600 Retina
Framebuffer Depth: 30-Bit Color (ARGB2101010)
Main Display: Yes
Mirror: Off
Online: Yes
Automatically Adjust Brightness: No
Connection Type: Internal
DELL P2211H:
Resolution: 1920 x 1080 (1080p FHD - Full High Definition)
UI Looks like: 1920 x 1080 @ 60.00Hz
Framebuffer Depth: 30-Bit Color (ARGB2101010)
Display Serial Number: TYXD912SB80L
Mirror: Off
Online: Yes
Rotation: Supported
Automatically Adjust Brightness: Yes
Connection Type: DVI or HDMI
Adapter Firmware Version: 7.59
PyQt version: 5.12.3
Compiled Qt version: 5.12.4
Runtime Qt version: 5.12.9
Installed Packages:
alabaster: 0.7.12
appdirs: 1.4.4
appnope: 0.1.0
Babel: 2.8.0
backcall: 0.2.0
blockdiag: 2.0.1
certifi: 2020.6.20
chardet: 3.0.4
ChimeraX-AddH: 2.1.3
ChimeraX-AlignmentAlgorithms: 2.0
ChimeraX-AlignmentHdrs: 3.2
ChimeraX-AlignmentMatrices: 2.0
ChimeraX-Alignments: 2.1
ChimeraX-Arrays: 1.0
ChimeraX-Atomic: 1.6.1
ChimeraX-AtomSearch: 2.0
ChimeraX-AxesPlanes: 2.0
ChimeraX-BasicActions: 1.1
ChimeraX-BILD: 1.0
ChimeraX-BlastProtein: 1.0.1
ChimeraX-BondRot: 2.0
ChimeraX-BugReporter: 1.0
ChimeraX-BuildStructure: 2.0
ChimeraX-Bumps: 1.0
ChimeraX-BundleBuilder: 1.0
ChimeraX-ButtonPanel: 1.0
ChimeraX-CageBuilder: 1.0
ChimeraX-CellPack: 1.0
ChimeraX-Centroids: 1.1
ChimeraX-ChemGroup: 2.0
ChimeraX-Clashes: 2.0
ChimeraX-ColorActions: 1.0
ChimeraX-ColorGlobe: 1.0
ChimeraX-CommandLine: 1.1.3
ChimeraX-ConnectStructure: 2.0
ChimeraX-Contacts: 1.0
ChimeraX-Core: 1.1.1
ChimeraX-CoreFormats: 1.0
ChimeraX-coulombic: 1.0.1
ChimeraX-Crosslinks: 1.0
ChimeraX-Crystal: 1.0
ChimeraX-Cytoscape: 0.1
ChimeraX-DataFormats: 1.0
ChimeraX-Dicom: 1.0
ChimeraX-DistMonitor: 1.1
ChimeraX-DistUI: 1.0
ChimeraX-Dssp: 2.0
ChimeraX-EMDB-SFF: 1.0
ChimeraX-ExperimentalCommands: 1.0
ChimeraX-FileHistory: 1.0
ChimeraX-FunctionKey: 1.0
ChimeraX-Geometry: 1.1
ChimeraX-gltf: 1.0
ChimeraX-Graphics: 1.0
ChimeraX-Hbonds: 2.0
ChimeraX-Help: 1.0
ChimeraX-HKCage: 1.3
ChimeraX-IHM: 1.0
ChimeraX-ImageFormats: 1.0
ChimeraX-IMOD: 1.0
ChimeraX-IO: 1.0
ChimeraX-Label: 1.0
ChimeraX-ListInfo: 1.0
ChimeraX-Log: 1.1.1
ChimeraX-LookingGlass: 1.1
ChimeraX-Map: 1.0.1
ChimeraX-MapData: 2.0
ChimeraX-MapEraser: 1.0
ChimeraX-MapFilter: 2.0
ChimeraX-MapFit: 2.0
ChimeraX-MapSeries: 2.0
ChimeraX-Markers: 1.0
ChimeraX-Mask: 1.0
ChimeraX-MatchMaker: 1.1
ChimeraX-MDcrds: 2.0
ChimeraX-MedicalToolbar: 1.0.1
ChimeraX-Meeting: 1.0
ChimeraX-MLP: 1.0
ChimeraX-mmCIF: 2.2
ChimeraX-MMTF: 2.0
ChimeraX-Modeller: 1.0
ChimeraX-ModelPanel: 1.0
ChimeraX-ModelSeries: 1.0
ChimeraX-Mol2: 2.0
ChimeraX-Morph: 1.0
ChimeraX-MouseModes: 1.0
ChimeraX-Movie: 1.0
ChimeraX-Neuron: 1.0
ChimeraX-Nucleotides: 2.0
ChimeraX-OpenCommand: 1.2.1
ChimeraX-PDB: 2.1
ChimeraX-PDBBio: 1.0
ChimeraX-PickBlobs: 1.0
ChimeraX-Positions: 1.0
ChimeraX-PresetMgr: 1.0
ChimeraX-PubChem: 2.0
ChimeraX-Read-Pbonds: 1.0
ChimeraX-Registration: 1.1
ChimeraX-RemoteControl: 1.0
ChimeraX-ResidueFit: 1.0
ChimeraX-RestServer: 1.0
ChimeraX-RNALayout: 1.0
ChimeraX-RotamerLibMgr: 2.0
ChimeraX-RotamerLibsDunbrack: 2.0
ChimeraX-RotamerLibsDynameomics: 2.0
ChimeraX-RotamerLibsRichardson: 2.0
ChimeraX-SaveCommand: 1.2
ChimeraX-SchemeMgr: 1.0
ChimeraX-SDF: 2.0
ChimeraX-Segger: 1.0
ChimeraX-Segment: 1.0
ChimeraX-SeqView: 2.2
ChimeraX-Shape: 1.0.1
ChimeraX-Shell: 1.0
ChimeraX-Shortcuts: 1.0
ChimeraX-ShowAttr: 1.0
ChimeraX-ShowSequences: 1.0
ChimeraX-SideView: 1.0
ChimeraX-Smiles: 2.0
ChimeraX-SmoothLines: 1.0
ChimeraX-SpaceNavigator: 1.0
ChimeraX-StdCommands: 1.0.4
ChimeraX-STL: 1.0
ChimeraX-Storm: 1.0
ChimeraX-Stringdb: 0.1
ChimeraX-Struts: 1.0
ChimeraX-Surface: 1.0
ChimeraX-SwapAA: 2.0
ChimeraX-SwapRes: 2.0
ChimeraX-TapeMeasure: 1.0
ChimeraX-Test: 1.0
ChimeraX-Toolbar: 1.0
ChimeraX-ToolshedUtils: 1.0
ChimeraX-Tug: 1.0
ChimeraX-UI: 1.2.3
ChimeraX-uniprot: 2.0
ChimeraX-ViewDockX: 1.0
ChimeraX-Vive: 1.1
ChimeraX-VolumeMenu: 1.0
ChimeraX-VTK: 1.0
ChimeraX-WavefrontOBJ: 1.0
ChimeraX-WebCam: 1.0
ChimeraX-WebServices: 1.0
ChimeraX-Zone: 1.0
colorama: 0.4.3
comtypes: 1.1.7
cxservices: 1.0
cycler: 0.10.0
Cython: 0.29.20
decorator: 4.4.2
distlib: 0.3.1
docutils: 0.16
filelock: 3.0.12
funcparserlib: 0.3.6
grako: 3.16.5
h5py: 2.10.0
html2text: 2020.1.16
idna: 2.10
ihm: 0.16
imagecodecs: 2020.5.30
imagecodecs-lite: 2020.1.31
imagesize: 1.2.0
ipykernel: 5.3.0
ipython: 7.15.0
ipython-genutils: 0.2.0
jedi: 0.17.2
Jinja2: 2.11.2
jupyter-client: 6.1.3
jupyter-core: 4.6.3
kiwisolver: 1.2.0
line-profiler: 2.1.2
lxml: 4.5.1
MarkupSafe: 1.1.1
matplotlib: 3.2.1
msgpack: 1.0.0
netifaces: 0.10.9
networkx: 2.4
numexpr: 2.7.1
numpy: 1.18.5
numpydoc: 1.0.0
openvr: 1.12.501
packaging: 20.4
parso: 0.7.1
pexpect: 4.8.0
pickleshare: 0.7.5
Pillow: 7.1.2
pip: 20.2.2
pkginfo: 1.5.0.1
prompt-toolkit: 3.0.7
psutil: 5.7.0
ptyprocess: 0.6.0
pycollada: 0.7.1
pydicom: 2.0.0
Pygments: 2.6.1
PyOpenGL: 3.1.5
PyOpenGL-accelerate: 3.1.5
pyparsing: 2.4.7
PyQt5-commercial: 5.12.3
PyQt5-sip: 4.19.19
PyQtWebEngine-commercial: 5.12.1
python-dateutil: 2.8.1
pytz: 2020.1
pyzmq: 19.0.2
qtconsole: 4.7.4
QtPy: 1.9.0
RandomWords: 0.3.0
requests: 2.24.0
scipy: 1.4.1
setuptools: 49.4.0
sfftk-rw: 0.6.6.dev0
six: 1.15.0
snowballstemmer: 2.0.0
sortedcontainers: 2.2.2
Sphinx: 3.1.1
sphinxcontrib-applehelp: 1.0.2
sphinxcontrib-blockdiag: 2.0.0
sphinxcontrib-devhelp: 1.0.2
sphinxcontrib-htmlhelp: 1.0.3
sphinxcontrib-jsmath: 1.0.1
sphinxcontrib-qthelp: 1.0.3
sphinxcontrib-serializinghtml: 1.1.4
suds-jurko: 0.6
tables: 3.6.1
tifffile: 2020.6.3
tinyarray: 1.2.2
tornado: 6.0.4
traitlets: 5.0.4
urllib3: 1.25.10
wcwidth: 0.2.5
webcolors: 1.11.1
wheel: 0.34.2
Change History (2)
comment:1 by , 5 years ago
| Cc: | added |
|---|---|
| Component: | Unassigned → Core |
| Owner: | set to |
| Platform: | → all |
| Project: | → ChimeraX |
| Status: | new → accepted |
| Summary: | ChimeraX bug report submission → Crash with trashed stack |
comment:2 by , 5 years ago
| Resolution: | → can't reproduce |
|---|---|
| Status: | accepted → closed |
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