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#4322 feedback defect

Matchmaker change matrix: wrapped C/C++ object of type QPushButton has been deleted

Reported by:	yoav@…	Owned by:	Eric Pettersen
Priority:	normal	Milestone:
Component:	Structure Comparison	Version:	1.1
Keywords:		Cc:
Blocked By:		Blocking:
Notify when closed:		Platform:	all
Project:	ChimeraX

Description

The following bug report has been submitted:
Platform:        Windows-10-10.0.19041
ChimeraX Version: 1.1 (2020-09-09 22:22:27 UTC)
Description
Occurs when trying to change the matrix in the matchmaker GUI 

Log:
Startup Messages  
---  
warning | No presets found in custom preset folder
C:/ProgramData/ChimeraX/Presets  
  

> graphics quality 3

> lighting qualityOfShadows finer

> graphics rate true

> graphics rate maxFrameRate 144

> graphics rate waitForVsync false

UCSF ChimeraX version: 1.1 (2020-09-09)  
© 2016-2020 Regents of the University of California. All rights reserved.  
How to cite UCSF ChimeraX  

> open 3cmt

3cmt title:  
Mechanism of homologous recombination from the RecA-ssDNA/dsDNA structures
[more info...]  
  
Chain information for 3cmt #1  
---  
Chain | Description  
A D | Protein recA  
B E | DNA
(5'-D(*DTP*DTP*DTP*DTP*DTP*DCP*DCP*DCP*dap*DCP*DCP*DTP*DTP*DTP*DT)-3')  
C F | DNA (5'-D(P*DGP*DGP*DTP*DGP*DGP*DG)-3')  
  
Non-standard residues in 3cmt #1  
---  
ADP — adenosine-5'-diphosphate  
ALF — tetrafluoroaluminate ion  
MG — magnesium ion  
  
3cmt mmCIF Assemblies  
---  
1| author_and_software_defined_assembly  
2| author_and_software_defined_assembly  
  

> preset "overall look" publication

Preset expands to these ChimeraX commands:

    
    
    set bg white
    graphics silhouettes t

  

> preset "initial styles" cartoon

Preset implemented in Python; no expansion to individual ChimeraX commands
available.  

> lighting full

> lighting shadows false

> lighting shadows true

> lighting simple

> lighting full

> set bgColor black

> lighting shadows false

> lighting shadows true

> color bychain

> color byhetero

> nucleotides atoms

> style nucleic stick

Changed 732 atom styles  

> select /B

236 atoms, 260 bonds, 12 residues, 1 model selected  

> select /A

12290 atoms, 12429 bonds, 16 pseudobonds, 1624 residues, 3 models selected  

> select /B

236 atoms, 260 bonds, 12 residues, 1 model selected  

> view sel

> ui mousemode right clip

> view sel

> sequence chain /B

Alignment identifier is 1/B  

> select clear

> view /B

> select /B:999

Nothing selected  

> select /B:1002

20 atoms, 21 bonds, 1 residue, 1 model selected  

> select clear

> select clear

> view sel

> open

Missing or invalid "fileNames" argument: Expected a file name  

> close #1

> open 3cmt maxAssemblies 1

'maxAssemblies' has no suffix  

> open maxAssemblies 1 3cmt

'maxAssemblies' has no suffix  

> open fromDatabase rcsb_bio 3cmt maxAssemblies 1

'fromDatabase' has no suffix  

> open 3cmt fromDatabase rcsb_bio maxAssemblies 1

Summary of feedback from opening 3cmt fetched from rcsb_bio  
---  
warnings | Start residue of secondary structure not found: HELIX 61 61 SER D
44 LEU D 51 1 8  
Start residue of secondary structure not found: HELIX 62 62 GLY D 71 ARG D 85
1 15  
Start residue of secondary structure not found: HELIX 63 63 ASP D 100 LEU D
107 1 8  
Start residue of secondary structure not found: HELIX 64 64 THR D 121 GLY D
136 1 16  
Start residue of secondary structure not found: HELIX 65 65 PRO D 151 GLY D
157 1 7  
137 messages similar to the above omitted  
Cannot find LINK/SSBOND residue THR (73 )  
Cannot find LINK/SSBOND residue THR (1073 )  
Cannot find LINK/SSBOND residue THR (2073 )  
Cannot find LINK/SSBOND residue THR (3073 )  
Cannot find LINK/SSBOND residue THR (4073 )  
5 messages similar to the above omitted  
note | Fetching compressed 3cmt bioassembly 1 from
https://files.rcsb.org/download/3cmt.pdb1.gz  
  
3cmt bioassembly 1 title:  
Mechanism of homologous recombination from the reca-ssDNA/dsDNA structures
[more info...]  
  
Chain information for 3cmt bioassembly 1 #1  
---  
Chain | Description  
A | No description available  
B | No description available  
C | No description available  
  
Non-standard residues in 3cmt bioassembly 1 #1  
---  
ADP — adenosine-5'-diphosphate  
ALF — tetrafluoroaluminate ion  
MG — magnesium ion  
  
Opened 1 biological assemblies for 3cmt  

> select #1.2

12 pseudobonds, 1 model selected  

> ~select #1.2

Nothing selected  

> select nucleic

366 atoms, 406 bonds, 18 residues, 1 model selected  

> select /A:37-4328

12257 atoms, 12396 bonds, 24 pseudobonds, 1621 residues, 3 models selected  

> select /B:1002-1013

236 atoms, 260 bonds, 12 residues, 1 model selected  

> select /C:2007-2012

130 atoms, 146 bonds, 6 residues, 1 model selected  

> select /B

236 atoms, 260 bonds, 12 residues, 1 model selected  

> split /B

Split 3cmt bioassembly 1 (#1) into 3 models  
Chain information for 3cmt bioassembly 1 A #1.1  
---  
Chain | Description  
A | No description available  
  
Chain information for 3cmt bioassembly 1 B #1.2  
---  
Chain | Description  
B | No description available  
  
Chain information for 3cmt bioassembly 1 C #1.3  
---  
Chain | Description  
C | No description available  
  

> select #1.1

12290 atoms, 12429 bonds, 27 pseudobonds, 1624 residues, 3 models selected  

> ~select #1.1

Nothing selected  

> select #1.2

236 atoms, 260 bonds, 12 residues, 1 model selected  

> ~select #1.2

Nothing selected  

> hide #1.3 models

> hide #!1.1 models

> select #1.2

236 atoms, 260 bonds, 12 residues, 1 model selected  

> select /C

130 atoms, 146 bonds, 6 residues, 1 model selected  

> show /C

> show #1.2 cartoons

> show #1.2 atoms

> select clear

> show #1.2 cartoons

> show #!1.1 models

> show #1.3 models

> el /C

Unknown command: el /C  

> select /C

130 atoms, 146 bonds, 6 residues, 1 model selected  

> hide sel cartoons

> hide sel atoms

> show sel atoms

> show sel cartoons

> hide #!1.1 models

> hide #1.3 models

> show #1.2 target m

> hide #1.2 target m

> show #1.2 target m

> show #1.3

> show #1.3 target m

> hide #1.3 target m

> show /C target m

> hide #1.3 models

> ui tool show "Color Actions"

> ui tool show "Color Actions"

> color sel cyan target c

> undo

> select #1.2

236 atoms, 260 bonds, 12 residues, 1 model selected  

> color sel cyan target c

> color sel cyan target ac

> color sel byhetero

> open "D:/OneDrive/OneDrive - mail.tau.ac.il/University/Year C/Int. to
> Structural Biology/Final Exam/Section 1/BForm-Template.pdb"

Chain information for BForm-Template.pdb #2  
---  
Chain | Description  
| No description available  
  

> sequence chain #2

Alignment identifier is 2/  

> select #2:11

32 atoms, 33 bonds, 1 residue, 1 model selected  

> select #2:12

33 atoms, 34 bonds, 1 residue, 1 model selected  

> select #2:11

32 atoms, 33 bonds, 1 residue, 1 model selected  

> select #2:12

33 atoms, 34 bonds, 1 residue, 1 model selected  

> select clear

> select #2:11

32 atoms, 33 bonds, 1 residue, 1 model selected  

> select #2:12

33 atoms, 34 bonds, 1 residue, 1 model selected  

> select #2:11

32 atoms, 33 bonds, 1 residue, 1 model selected  

> view #2 clip false

> view sel

> view

> select #2

761 atoms, 819 bonds, 24 residues, 1 model selected  

> view sel

> select clear

> select #2:12

33 atoms, 34 bonds, 1 residue, 1 model selected  

> select reverse

Expected an objects specifier or a keyword  

> select ~sel

13044 atoms, 13257 bonds, 27 pseudobonds, 1654 residues, 7 models selected  

> hide #1.2 models

> select ~sel

13044 atoms, 13257 bonds, 27 pseudobonds, 1654 residues, 7 models selected  

> select #2:1-12

373 atoms, 397 bonds, 12 residues, 1 model selected  

> select #2:1-12

373 atoms, 397 bonds, 12 residues, 1 model selected  

> select #2

761 atoms, 819 bonds, 24 residues, 1 model selected  

> select subtract #2:1-12

388 atoms, 422 bonds, 12 residues, 1 model selected  

> delete sel

> select clear

> sequence chain #2

Alignment identifier is 2/  

> select clear

> select #1.2

236 atoms, 260 bonds, 12 residues, 1 model selected  

> select #2

373 atoms, 397 bonds, 12 residues, 1 model selected  

> view sel

> show #1.2 models

> select #1.2

236 atoms, 260 bonds, 12 residues, 1 model selected  

> select #2

373 atoms, 397 bonds, 12 residues, 1 model selected  

> select #2#1.2

609 atoms, 657 bonds, 24 residues, 2 models selected  

> view sel

> select #2

373 atoms, 397 bonds, 12 residues, 1 model selected  

> color sel byhetero

> nucleotides sel atoms

> style nucleic & sel stick

Changed 373 atom styles  

> color sel red target ac

> select #1.2

236 atoms, 260 bonds, 12 residues, 1 model selected  

> color sel dodger blue target ac

> select #2

373 atoms, 397 bonds, 12 residues, 1 model selected  

> color sel coral target ac

> color sel orange target ac

> color sel dark orange target ac

> color sel byhetero

> select #1.2

236 atoms, 260 bonds, 12 residues, 1 model selected  

> color sel byhetero

> ui tool show Matchmaker

> help help:user

> align #1.2 toAtoms #2

Unequal number of atoms to pair, 236 and 373  

> sequence chain #1.2

Alignment identifier is 1.2/B  

> sequence chain #2

Alignment identifier is 2/  

> close #2

> open "D:/OneDrive/OneDrive - mail.tau.ac.il/University/Year C/Int. to
> Structural Biology/Final Exam/Section 1/Bdna.pdb"

Chain information for Bdna.pdb #2  
---  
Chain | Description  
| No description available  
  

> align #1.2 toAtoms #2

Unequal number of atoms to pair, 236 and 373  

> sequence chain #2

Alignment identifier is 2/  

> select #1.2

236 atoms, 260 bonds, 12 residues, 1 model selected  

> select #2

373 atoms, 397 bonds, 12 residues, 1 model selected  

> ui tool show Matchmaker

Traceback (most recent call last):  
File "D:\ChimeraX 1.1\bin\lib\site-packages\chimerax\core\triggerset.py", line
130, in invoke  
return self._func(self._name, data)  
File "D:\ChimeraX 1.1\bin\lib\site-packages\chimerax\ui\options\options.py",
line 50, in <lambda>  
data[0] == pself.attr_name and setattr(pself, "value", pself.get_attribute()))  
File "D:\ChimeraX 1.1\bin\lib\site-packages\chimerax\ui\options\options.py",
line 276, in set_value  
self.widget.setText(value)  
RuntimeError: wrapped C/C++ object of type QPushButton has been deleted  
  
Error processing trigger "setting changed":  
RuntimeError: wrapped C/C++ object of type QPushButton has been deleted  
  
File "D:\ChimeraX 1.1\bin\lib\site-packages\chimerax\ui\options\options.py",
line 276, in set_value  
self.widget.setText(value)  
  
See log for complete Python traceback.  
  

> select #2

373 atoms, 397 bonds, 12 residues, 1 model selected  

> nucleotides sel atoms

> style nucleic & sel stick

Changed 373 atom styles  

> ui tool show "Color Actions"

> color sel chocolate target ac

> color sel dark orange target ac

> color sel byhetero

> ui tool show Matchmaker

Traceback (most recent call last):  
File "D:\ChimeraX 1.1\bin\lib\site-packages\chimerax\core\triggerset.py", line
130, in invoke  
return self._func(self._name, data)  
File "D:\ChimeraX 1.1\bin\lib\site-packages\chimerax\ui\options\options.py",
line 50, in <lambda>  
data[0] == pself.attr_name and setattr(pself, "value", pself.get_attribute()))  
File "D:\ChimeraX 1.1\bin\lib\site-packages\chimerax\ui\options\options.py",
line 276, in set_value  
self.widget.setText(value)  
RuntimeError: wrapped C/C++ object of type QPushButton has been deleted  
  
Error processing trigger "setting changed":  
RuntimeError: wrapped C/C++ object of type QPushButton has been deleted  
  
File "D:\ChimeraX 1.1\bin\lib\site-packages\chimerax\ui\options\options.py",
line 276, in set_value  
self.widget.setText(value)  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "D:\ChimeraX 1.1\bin\lib\site-packages\chimerax\core\triggerset.py", line
130, in invoke  
return self._func(self._name, data)  
File "D:\ChimeraX 1.1\bin\lib\site-packages\chimerax\ui\options\options.py",
line 50, in <lambda>  
data[0] == pself.attr_name and setattr(pself, "value", pself.get_attribute()))  
File "D:\ChimeraX 1.1\bin\lib\site-packages\chimerax\ui\options\options.py",
line 276, in set_value  
self.widget.setText(value)  
RuntimeError: wrapped C/C++ object of type QPushButton has been deleted  
  
Error processing trigger "setting changed":  
RuntimeError: wrapped C/C++ object of type QPushButton has been deleted  
  
File "D:\ChimeraX 1.1\bin\lib\site-packages\chimerax\ui\options\options.py",
line 276, in set_value  
self.widget.setText(value)  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "D:\ChimeraX 1.1\bin\lib\site-packages\chimerax\core\triggerset.py", line
130, in invoke  
return self._func(self._name, data)  
File "D:\ChimeraX 1.1\bin\lib\site-packages\chimerax\ui\options\options.py",
line 50, in <lambda>  
data[0] == pself.attr_name and setattr(pself, "value", pself.get_attribute()))  
File "D:\ChimeraX 1.1\bin\lib\site-packages\chimerax\ui\options\options.py",
line 276, in set_value  
self.widget.setText(value)  
RuntimeError: wrapped C/C++ object of type QPushButton has been deleted  
  
Error processing trigger "setting changed":  
RuntimeError: wrapped C/C++ object of type QPushButton has been deleted  
  
File "D:\ChimeraX 1.1\bin\lib\site-packages\chimerax\ui\options\options.py",
line 276, in set_value  
self.widget.setText(value)  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "D:\ChimeraX 1.1\bin\lib\site-packages\chimerax\core\triggerset.py", line
130, in invoke  
return self._func(self._name, data)  
File "D:\ChimeraX 1.1\bin\lib\site-packages\chimerax\ui\options\options.py",
line 50, in <lambda>  
data[0] == pself.attr_name and setattr(pself, "value", pself.get_attribute()))  
File "D:\ChimeraX 1.1\bin\lib\site-packages\chimerax\ui\options\options.py",
line 276, in set_value  
self.widget.setText(value)  
RuntimeError: wrapped C/C++ object of type QPushButton has been deleted  
  
Error processing trigger "setting changed":  
RuntimeError: wrapped C/C++ object of type QPushButton has been deleted  
  
File "D:\ChimeraX 1.1\bin\lib\site-packages\chimerax\ui\options\options.py",
line 276, in set_value  
self.widget.setText(value)  
  
See log for complete Python traceback.  
  




OpenGL version: 3.3.0 NVIDIA 460.89
OpenGL renderer: GeForce GTX 1080/PCIe/SSE2
OpenGL vendor: NVIDIA Corporation
Manufacturer: System manufacturer
Model: System Product Name
OS: Microsoft Windows 10 Pro N (Build 19042)
Memory: 17,113,600,000
MaxProcessMemory: 137,438,953,344
CPU: 16 AMD Ryzen 7 1700 Eight-Core Processor          "
PyQt version: 5.12.3
Compiled Qt version: 5.12.4
Runtime Qt version: 5.12.9
Installed Packages:
    alabaster: 0.7.12
    appdirs: 1.4.4
    Babel: 2.8.0
    backcall: 0.2.0
    blockdiag: 2.0.1
    certifi: 2020.6.20
    chardet: 3.0.4
    ChimeraX-AddH: 2.1.3
    ChimeraX-AlignmentAlgorithms: 2.0
    ChimeraX-AlignmentHdrs: 3.2
    ChimeraX-AlignmentMatrices: 2.0
    ChimeraX-Alignments: 2.1
    ChimeraX-Arrays: 1.0
    ChimeraX-Atomic: 1.6.1
    ChimeraX-AtomSearch: 2.0
    ChimeraX-AxesPlanes: 2.0
    ChimeraX-BasicActions: 1.1
    ChimeraX-BILD: 1.0
    ChimeraX-BlastProtein: 1.0.1
    ChimeraX-BondRot: 2.0
    ChimeraX-BugReporter: 1.0
    ChimeraX-BuildStructure: 2.0
    ChimeraX-Bumps: 1.0
    ChimeraX-BundleBuilder: 1.0
    ChimeraX-ButtonPanel: 1.0
    ChimeraX-CageBuilder: 1.0
    ChimeraX-CellPack: 1.0
    ChimeraX-Centroids: 1.1
    ChimeraX-ChemGroup: 2.0
    ChimeraX-Clashes: 2.0
    ChimeraX-Clipper: 0.15.0
    ChimeraX-ColorActions: 1.0
    ChimeraX-ColorGlobe: 1.0
    ChimeraX-CommandLine: 1.1.3
    ChimeraX-ConnectStructure: 2.0
    ChimeraX-Contacts: 1.0
    ChimeraX-Core: 1.1
    ChimeraX-CoreFormats: 1.0
    ChimeraX-coulombic: 1.0.1
    ChimeraX-Crosslinks: 1.0
    ChimeraX-Crystal: 1.0
    ChimeraX-DataFormats: 1.0
    ChimeraX-Dicom: 1.0
    ChimeraX-DistMonitor: 1.1
    ChimeraX-DistUI: 1.0
    ChimeraX-Dssp: 2.0
    ChimeraX-EMDB-SFF: 1.0
    ChimeraX-ExperimentalCommands: 1.0
    ChimeraX-FileHistory: 1.0
    ChimeraX-FunctionKey: 1.0
    ChimeraX-Geometry: 1.1
    ChimeraX-gltf: 1.0
    ChimeraX-Graphics: 1.0
    ChimeraX-Hbonds: 2.0
    ChimeraX-Help: 1.0
    ChimeraX-HKCage: 1.3
    ChimeraX-IHM: 1.0
    ChimeraX-ImageFormats: 1.0
    ChimeraX-IMOD: 1.0
    ChimeraX-IO: 1.0
    ChimeraX-Label: 1.0
    ChimeraX-ListInfo: 1.0
    ChimeraX-Log: 1.1.1
    ChimeraX-LookingGlass: 1.1
    ChimeraX-Map: 1.0.1
    ChimeraX-MapData: 2.0
    ChimeraX-MapEraser: 1.0
    ChimeraX-MapFilter: 2.0
    ChimeraX-MapFit: 2.0
    ChimeraX-MapSeries: 2.0
    ChimeraX-Markers: 1.0
    ChimeraX-Mask: 1.0
    ChimeraX-MatchMaker: 1.1
    ChimeraX-MDcrds: 2.0
    ChimeraX-MedicalToolbar: 1.0.1
    ChimeraX-Meeting: 1.0
    ChimeraX-MLP: 1.0
    ChimeraX-mmCIF: 2.2
    ChimeraX-MMTF: 2.0
    ChimeraX-Modeller: 1.0
    ChimeraX-ModelPanel: 1.0
    ChimeraX-ModelSeries: 1.0
    ChimeraX-Mol2: 2.0
    ChimeraX-Morph: 1.0
    ChimeraX-MouseModes: 1.0
    ChimeraX-Movie: 1.0
    ChimeraX-Neuron: 1.0
    ChimeraX-Nucleotides: 2.0
    ChimeraX-OpenCommand: 1.2.1
    ChimeraX-PDB: 2.1
    ChimeraX-PDBBio: 1.0
    ChimeraX-PickBlobs: 1.0
    ChimeraX-Positions: 1.0
    ChimeraX-PresetMgr: 1.0
    ChimeraX-PubChem: 2.0
    ChimeraX-Read-Pbonds: 1.0
    ChimeraX-Registration: 1.1
    ChimeraX-RemoteControl: 1.0
    ChimeraX-ResidueFit: 1.0
    ChimeraX-RestServer: 1.0
    ChimeraX-RNALayout: 1.0
    ChimeraX-RotamerLibMgr: 2.0
    ChimeraX-RotamerLibsDunbrack: 2.0
    ChimeraX-RotamerLibsDynameomics: 2.0
    ChimeraX-RotamerLibsRichardson: 2.0
    ChimeraX-SaveCommand: 1.2
    ChimeraX-SchemeMgr: 1.0
    ChimeraX-SDF: 2.0
    ChimeraX-Segger: 1.0
    ChimeraX-Segment: 1.0
    ChimeraX-SeqView: 2.2
    ChimeraX-Shape: 1.0.1
    ChimeraX-Shell: 1.0
    ChimeraX-Shortcuts: 1.0
    ChimeraX-ShowAttr: 1.0
    ChimeraX-ShowSequences: 1.0
    ChimeraX-SideView: 1.0
    ChimeraX-Smiles: 2.0
    ChimeraX-SmoothLines: 1.0
    ChimeraX-SpaceNavigator: 1.0
    ChimeraX-StdCommands: 1.0.4
    ChimeraX-STL: 1.0
    ChimeraX-Storm: 1.0
    ChimeraX-Struts: 1.0
    ChimeraX-Surface: 1.0
    ChimeraX-SwapAA: 2.0
    ChimeraX-SwapRes: 2.0
    ChimeraX-TapeMeasure: 1.0
    ChimeraX-Test: 1.0
    ChimeraX-Toolbar: 1.0
    ChimeraX-ToolshedUtils: 1.0
    ChimeraX-Tug: 1.0
    ChimeraX-UI: 1.2.3
    ChimeraX-uniprot: 2.0
    ChimeraX-ViewDockX: 1.0
    ChimeraX-Vive: 1.1
    ChimeraX-VolumeMenu: 1.0
    ChimeraX-VTK: 1.0
    ChimeraX-WavefrontOBJ: 1.0
    ChimeraX-WebCam: 1.0
    ChimeraX-WebServices: 1.0
    ChimeraX-Zone: 1.0
    colorama: 0.4.3
    comtypes: 1.1.7
    cxservices: 1.0
    cycler: 0.10.0
    Cython: 0.29.20
    decorator: 4.4.2
    distlib: 0.3.1
    docutils: 0.16
    filelock: 3.0.12
    funcparserlib: 0.3.6
    gdcm: 2.8.8
    grako: 3.16.5
    h5py: 2.10.0
    html2text: 2020.1.16
    idna: 2.10
    ihm: 0.16
    imagecodecs: 2020.5.30
    imagecodecs-lite: 2020.1.31
    imagesize: 1.2.0
    ipykernel: 5.3.0
    ipython: 7.15.0
    ipython-genutils: 0.2.0
    jedi: 0.17.2
    Jinja2: 2.11.2
    jupyter-client: 6.1.3
    jupyter-core: 4.6.3
    kiwisolver: 1.2.0
    line-profiler: 2.1.2
    lxml: 4.5.1
    MarkupSafe: 1.1.1
    matplotlib: 3.2.1
    msgpack: 1.0.0
    netifaces: 0.10.9
    networkx: 2.4
    numexpr: 2.7.1
    numpy: 1.18.5+mkl
    numpydoc: 1.0.0
    openvr: 1.12.501
    packaging: 20.4
    parso: 0.7.1
    pickleshare: 0.7.5
    Pillow: 7.1.2
    pip: 20.2.2
    pkginfo: 1.5.0.1
    prompt-toolkit: 3.0.7
    psutil: 5.7.0
    pycollada: 0.7.1
    pydicom: 2.0.0
    Pygments: 2.6.1
    PyOpenGL: 3.1.5
    PyOpenGL-accelerate: 3.1.5
    pyparsing: 2.4.7
    PyQt5-commercial: 5.12.3
    PyQt5-sip: 4.19.19
    PyQtWebEngine-commercial: 5.12.1
    python-dateutil: 2.8.1
    pytz: 2020.1
    pywin32: 228
    pyzmq: 19.0.2
    qtconsole: 4.7.4
    QtPy: 1.9.0
    RandomWords: 0.3.0
    requests: 2.24.0
    scipy: 1.4.1
    setuptools: 49.4.0
    sfftk-rw: 0.6.6.dev0
    six: 1.15.0
    snowballstemmer: 2.0.0
    sortedcontainers: 2.2.2
    Sphinx: 3.1.1
    sphinxcontrib-applehelp: 1.0.2
    sphinxcontrib-blockdiag: 2.0.0
    sphinxcontrib-devhelp: 1.0.2
    sphinxcontrib-htmlhelp: 1.0.3
    sphinxcontrib-jsmath: 1.0.1
    sphinxcontrib-qthelp: 1.0.3
    sphinxcontrib-serializinghtml: 1.1.4
    suds-jurko: 0.6
    tables: 3.6.1
    tifffile: 2020.6.3
    tinyarray: 1.2.2
    tornado: 6.0.4
    traitlets: 5.0.4
    urllib3: 1.25.10
    wcwidth: 0.2.5
    webcolors: 1.11.1
    wheel: 0.34.2
    WMI: 1.5.1

Change History (2)

comment:1 by Eric Pettersen, 5 years ago

Component:	Unassigned → Structure Comparison
Owner:	set to Eric Pettersen
Platform:	→ all
Project:	→ ChimeraX
Status:	new → accepted
Summary:	ChimeraX bug report submission → Matchmaker change matrix: wrapped C/C++ object of type QPushButton has been deleted

comment:2 by Eric Pettersen, 5 years ago

Status:	accepted → feedback
Version:	→ 1.1

Hi Yoav,

Thanks for reporting this problem. Unfortunately I am having trouble reproducing it. Can you reproduce it? If you can, could you save a session from just before the problem occurs and send me that? It would help immensely.

--Eric

Eric Pettersen
UCSF Computer Graphics Lab

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