![[ChimeraX Issue Tracking System]](/trac/ChimeraX/chrome/site/ChimeraX-icon.svg){kind=icon}
Opened 5 years ago
Closed 3 years ago
#4093 closed defect (can't reproduce)
OpenMM crash uploading OpenCL array
| Reported by: | Owned by: | Tristan Croll | |
|---|---|---|---|
| Priority: | normal | Milestone: | |
| Component: | Third Party | Version: | |
| Keywords: | Cc: | Tom Goddard | |
| Blocked By: | Blocking: | ||
| Notify when closed: | Platform: | all | |
| Project: | ChimeraX |
Description
The following bug report has been submitted:
Platform: Darwin-17.7.0-x86_64-i386-64bit
ChimeraX Version: 1.1.1 (2020-10-07 08:32:49 UTC)
Description
Last time you used ChimeraX it crashed.
Please describe steps that led to the crash here.
Process: ChimeraX [3489]
Path: /programs/*/ChimeraX.app/Contents/MacOS/ChimeraX
Identifier: edu.ucsf.cgl.ChimeraX
Version: 1.1.1 (1.1.1.0)
Code Type: X86-64 (Native)
Parent Process: ??? [3488]
Responsible: ChimeraX [3489]
User ID: 501
Date/Time: 2020-12-28 09:55:07.931 -0500
OS Version: Mac OS X 10.13.6 (17G9016)
Report Version: 12
Anonymous UUID: A0AC0AE1-4A67-D0DA-FC2E-B2F75B05DF9E
Time Awake Since Boot: 1500 seconds
System Integrity Protection: enabled
Crashed Thread: 0 CrBrowserMain Dispatch queue: opencl_runtime
Exception Type: EXC_CRASH (SIGABRT)
Exception Codes: 0x0000000000000000, 0x0000000000000000
Exception Note: EXC_CORPSE_NOTIFY
Application Specific Information:
abort() called
Application Specific Signatures:
Graphics kernel error: 0xfffffffe
Thread 0 Crashed:: CrBrowserMain Dispatch queue: opencl_runtime
0 libsystem_kernel.dylib 0x00007fff5dcb0b66 __pthread_kill + 10
1 libsystem_pthread.dylib 0x00007fff5de7b080 pthread_kill + 333
2 libsystem_c.dylib 0x00007fff5dbbe6fe raise + 26
3 libsystem_platform.dylib 0x00007fff5de6ef5a _sigtramp + 26
4 ??? 000000000000000000 0 + 0
5 libsystem_c.dylib 0x00007fff5dc0c1ae abort + 127
6 libGPUSupportMercury.dylib 0x00007fff4e6fa0f1 gpusGenerateCrashLog + 168
7 com.apple.driver.AppleIntelKBLGraphicsGLDriver 0x00000001172202e9 gpusKillClientExt + 9
8 libGPUSupportMercury.dylib 0x00007fff4e6faab0 gpusQueueSubmitDataBuffers + 171
9 com.apple.driver.AppleIntelKBLGraphicsGLDriver 0x00000001168eec87 IntelCLCommandBuffer::getNew(GLDQueueRec*) + 31
10 com.apple.driver.AppleIntelKBLGraphicsGLDriver 0x00000001168eeb6f intelSubmitCLCommands(GLDQueueRec*, unsigned int) + 69
11 com.apple.driver.AppleIntelKBLGraphicsGLDriver 0x00000001168eeabc CHAL_INTEL::ChalContext::ChalFlush() + 82
12 com.apple.driver.AppleIntelKBLGraphicsGLDriver 0x00000001168eea2b gldFinishQueue + 43
13 com.apple.opencl 0x00007fff3e3b70c1 0x7fff3e3a9000 + 57537
14 com.apple.opencl 0x00007fff3e3b7d8a 0x7fff3e3a9000 + 60810
15 com.apple.opencl 0x00007fff3e3d47bd 0x7fff3e3a9000 + 178109
16 com.apple.opencl 0x00007fff3e3d7a90 0x7fff3e3a9000 + 191120
17 libdispatch.dylib 0x00007fff5db26db8 _dispatch_client_callout + 8
18 libdispatch.dylib 0x00007fff5db3a1e1 _dispatch_queue_barrier_sync_invoke_and_complete + 60
19 com.apple.opencl 0x00007fff3e3d790a 0x7fff3e3a9000 + 190730
20 com.apple.opencl 0x00007fff3e3d3a49 0x7fff3e3a9000 + 174665
21 com.apple.opencl 0x00007fff3e3c9a97 clEnqueueWriteBuffer + 777
22 libOpenMMOpenCL.dylib 0x000000014155cd78 OpenMM::OpenCLArray::upload(void const*, bool) + 104
23 libOpenMMOpenCL.dylib 0x0000000141635f82 OpenMM::OpenCLCalcCustomCompoundBondForceKernel::initialize(OpenMM::System const&, OpenMM::CustomCompoundBondForce const&) + 2146
24 libOpenMM.dylib 0x000000013fdab089 OpenMM::CustomCompoundBondForceImpl::initialize(OpenMM::ContextImpl&) + 489
25 libOpenMM.dylib 0x000000013fd97228 OpenMM::ContextImpl::initialize() + 1160
26 libOpenMM.dylib 0x000000013fd935b3 OpenMM::Context::Context(OpenMM::System const&, OpenMM::Integrator&, OpenMM::Platform&, std::__1::map, std::__1::allocator >, std::__1::basic_string, std::__1::allocator >, std::__1::less, std::__1::allocator > >, std::__1::allocator, std::__1::allocator > const, std::__1::basic_string, std::__1::allocator > > > > const&) + 227
27 _openmm.cpython-37m-darwin.so 0x000000013fa8171b _wrap_new_Context(_object*, _object*) + 1275
28 org.python.python 0x00000001001a8c23 PyCFunction_Call + 387
29 org.python.python 0x000000010027ab3a _PyEval_EvalFrameDefault + 27370
30 org.python.python 0x000000010027ea2c _PyEval_EvalCodeWithName + 3276
31 org.python.python 0x00000001001a8377 _PyFunction_FastCallDict + 455
32 org.python.python 0x00000001001a9873 _PyObject_Call_Prepend + 131
33 org.python.python 0x00000001001fce3f slot_tp_init + 175
34 org.python.python 0x00000001001f8534 type_call + 292
35 org.python.python 0x00000001001a86df _PyObject_FastCallKeywords + 575
36 org.python.python 0x000000010027dbcd call_function + 765
37 org.python.python 0x000000010027a817 _PyEval_EvalFrameDefault + 26567
38 org.python.python 0x000000010027ea2c _PyEval_EvalCodeWithName + 3276
39 org.python.python 0x00000001001a8377 _PyFunction_FastCallDict + 455
40 org.python.python 0x00000001001a9873 _PyObject_Call_Prepend + 131
41 org.python.python 0x00000001001fce3f slot_tp_init + 175
42 org.python.python 0x00000001001f8534 type_call + 292
43 org.python.python 0x00000001001a86df _PyObject_FastCallKeywords + 575
44 org.python.python 0x000000010027dbcd call_function + 765
45 org.python.python 0x000000010027a817 _PyEval_EvalFrameDefault + 26567
46 org.python.python 0x00000001001a8d61 function_code_fastcall + 177
47 org.python.python 0x000000010027dbd4 call_function + 772
48 org.python.python 0x000000010027a7fa _PyEval_EvalFrameDefault + 26538
49 org.python.python 0x00000001001a8d61 function_code_fastcall + 177
50 org.python.python 0x000000010027dbd4 call_function + 772
51 org.python.python 0x000000010027a7fa _PyEval_EvalFrameDefault + 26538
52 org.python.python 0x00000001001a8d61 function_code_fastcall + 177
53 org.python.python 0x000000010027dbd4 call_function + 772
54 org.python.python 0x000000010027a7fa _PyEval_EvalFrameDefault + 26538
55 org.python.python 0x00000001001a8d61 function_code_fastcall + 177
56 org.python.python 0x000000010027dbd4 call_function + 772
57 org.python.python 0x000000010027a7fa _PyEval_EvalFrameDefault + 26538
58 org.python.python 0x000000010027ea2c _PyEval_EvalCodeWithName + 3276
59 org.python.python 0x00000001001a8377 _PyFunction_FastCallDict + 455
60 org.python.python 0x00000001001a9873 _PyObject_Call_Prepend + 131
61 org.python.python 0x00000001001a89d8 PyObject_Call + 136
62 QtCore.so 0x000000010af3cf17 PyQtSlot::call(_object*, _object*) const + 39
63 QtCore.so 0x000000010af3ce26 PyQtSlot::invoke(void**, _object*, void*, bool) const + 374
64 QtCore.so 0x000000010af3d925 PyQtSlotProxy::unislot(void**) + 85
65 QtCore.so 0x000000010af3d89a PyQtSlotProxy::qt_metacall(QMetaObject::Call, int, void**) + 58
66 QtCore 0x000000010aa3213d QMetaObject::activate(QObject*, int, int, void**) + 1773
67 QtWidgets 0x0000000109dffe2f 0x109d05000 + 1027631
68 QtWidgets 0x0000000109dffccc 0x109d05000 + 1027276
69 QtWidgets 0x0000000109e00dff QAbstractButton::mouseReleaseEvent(QMouseEvent*) + 271
70 QtWidgets.so 0x00000001098b8238 sipQPushButton::mouseReleaseEvent(QMouseEvent*) + 120
71 QtWidgets 0x0000000109d513bd QWidget::event(QEvent*) + 445
72 QtWidgets.so 0x00000001098b8b50 sipQPushButton::event(QEvent*) + 192
73 QtWidgets 0x0000000109d1567d QApplicationPrivate::notify_helper(QObject*, QEvent*) + 269
74 QtWidgets 0x0000000109d184d8 QApplication::notify(QObject*, QEvent*) + 7336
75 QtWidgets.so 0x00000001098d53ca sipQApplication::notify(QObject*, QEvent*) + 234
76 QtCore 0x000000010aa01324 QCoreApplication::notifyInternal2(QObject*, QEvent*) + 212
77 QtWidgets 0x0000000109d15fa0 QApplicationPrivate::sendMouseEvent(QWidget*, QMouseEvent*, QWidget*, QWidget*, QWidget**, QPointer&, bool, bool) + 896
78 QtWidgets 0x0000000109d7090e 0x109d05000 + 440590
79 QtWidgets 0x0000000109d6f5c9 0x109d05000 + 435657
80 QtWidgets 0x0000000109d1567d QApplicationPrivate::notify_helper(QObject*, QEvent*) + 269
81 QtWidgets 0x0000000109d16a82 QApplication::notify(QObject*, QEvent*) + 594
82 QtWidgets.so 0x00000001098d53ca sipQApplication::notify(QObject*, QEvent*) + 234
83 QtCore 0x000000010aa01324 QCoreApplication::notifyInternal2(QObject*, QEvent*) + 212
84 QtGui 0x000000010a2ea779 QGuiApplicationPrivate::processMouseEvent(QWindowSystemInterfacePrivate::MouseEvent*) + 3961
85 QtGui 0x000000010a2d146b QWindowSystemInterface::sendWindowSystemEvents(QFlags) + 219
86 libqcocoa.dylib 0x0000000114bbe900 0x114b88000 + 223488
87 libqcocoa.dylib 0x0000000114bbf068 0x114b88000 + 225384
88 com.apple.CoreFoundation 0x00007fff35c47851 __CFRUNLOOP_IS_CALLING_OUT_TO_A_SOURCE0_PERFORM_FUNCTION__ + 17
89 com.apple.CoreFoundation 0x00007fff35d01e4c __CFRunLoopDoSource0 + 108
90 com.apple.CoreFoundation 0x00007fff35c2a2b0 __CFRunLoopDoSources0 + 208
91 com.apple.CoreFoundation 0x00007fff35c2972d __CFRunLoopRun + 1293
92 com.apple.CoreFoundation 0x00007fff35c28f93 CFRunLoopRunSpecific + 483
93 com.apple.HIToolbox 0x00007fff34f13d96 RunCurrentEventLoopInMode + 286
94 com.apple.HIToolbox 0x00007fff34f13a0f ReceiveNextEventCommon + 366
95 com.apple.HIToolbox 0x00007fff34f13884 _BlockUntilNextEventMatchingListInModeWithFilter + 64
96 com.apple.AppKit 0x00007fff331c2a3b _DPSNextEvent + 2085
97 com.apple.AppKit 0x00007fff33958e34 -[NSApplication(NSEvent) _nextEventMatchingEventMask:untilDate:inMode:dequeue:] + 3044
98 com.apple.AppKit 0x00007fff331b784d -[NSApplication run] + 764
99 libqcocoa.dylib 0x0000000114bbdde3 0x114b88000 + 220643
100 QtCore 0x000000010a9fc93f QEventLoop::exec(QFlags) + 431
101 QtCore 0x000000010aa01932 QCoreApplication::exec() + 130
102 QtWidgets.so 0x00000001099c47d2 meth_QApplication_exec_(_object*, _object*) + 82
103 org.python.python 0x00000001001a9382 _PyMethodDef_RawFastCallKeywords + 226
104 org.python.python 0x00000001001a88b9 _PyCFunction_FastCallKeywords + 41
105 org.python.python 0x000000010027db60 call_function + 656
106 org.python.python 0x000000010027a817 _PyEval_EvalFrameDefault + 26567
107 org.python.python 0x00000001001a8d61 function_code_fastcall + 177
108 org.python.python 0x000000010027dbd4 call_function + 772
109 org.python.python 0x000000010027a817 _PyEval_EvalFrameDefault + 26567
110 org.python.python 0x000000010027ea2c _PyEval_EvalCodeWithName + 3276
111 org.python.python 0x00000001001a8879 _PyFunction_FastCallKeywords + 217
112 org.python.python 0x000000010027dbd4 call_function + 772
113 org.python.python 0x000000010027a8ae _PyEval_EvalFrameDefault + 26718
114 org.python.python 0x000000010027ea2c _PyEval_EvalCodeWithName + 3276
115 org.python.python 0x0000000100273fb0 PyEval_EvalCode + 48
116 org.python.python 0x0000000100271547 builtin_exec + 583
117 org.python.python 0x00000001001a952d _PyMethodDef_RawFastCallKeywords + 653
118 org.python.python 0x00000001001a88b9 _PyCFunction_FastCallKeywords + 41
119 org.python.python 0x000000010027db60 call_function + 656
120 org.python.python 0x000000010027a8ae _PyEval_EvalFrameDefault + 26718
121 org.python.python 0x000000010027ea2c _PyEval_EvalCodeWithName + 3276
122 org.python.python 0x00000001001a8879 _PyFunction_FastCallKeywords + 217
123 org.python.python 0x000000010027dbd4 call_function + 772
124 org.python.python 0x000000010027a8ae _PyEval_EvalFrameDefault + 26718
125 org.python.python 0x000000010027ea2c _PyEval_EvalCodeWithName + 3276
126 org.python.python 0x00000001001a8377 _PyFunction_FastCallDict + 455
127 org.python.python 0x00000001002d8af3 pymain_run_module + 147
128 org.python.python 0x00000001002d7bdc pymain_main + 5900
129 org.python.python 0x00000001002d64c3 Py_Main + 51
130 edu.ucsf.cgl.ChimeraX 0x000000010017cdc8 main + 120
131 libdyld.dylib 0x00007fff5db60015 start + 1
Thread 1:
0 libsystem_kernel.dylib 0x00007fff5dcb0a16 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff5de79589 _pthread_cond_wait + 732
2 libopenblasp-r0.3.7.dylib 0x0000000102442c3b blas_thread_server + 619
3 libsystem_pthread.dylib 0x00007fff5de78661 _pthread_body + 340
4 libsystem_pthread.dylib 0x00007fff5de7850d _pthread_start + 377
5 libsystem_pthread.dylib 0x00007fff5de77bf9 thread_start + 13
Thread 2:: com.apple.NSEventThread
0 libsystem_kernel.dylib 0x00007fff5dca720a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff5dca6724 mach_msg + 60
2 com.apple.CoreFoundation 0x00007fff35c2a5c5 __CFRunLoopServiceMachPort + 341
3 com.apple.CoreFoundation 0x00007fff35c29917 __CFRunLoopRun + 1783
4 com.apple.CoreFoundation 0x00007fff35c28f93 CFRunLoopRunSpecific + 483
5 com.apple.AppKit 0x00007fff332fffc4 _NSEventThread + 184
6 libsystem_pthread.dylib 0x00007fff5de78661 _pthread_body + 340
7 libsystem_pthread.dylib 0x00007fff5de7850d _pthread_start + 377
8 libsystem_pthread.dylib 0x00007fff5de77bf9 thread_start + 13
Thread 3:: NetworkConfigWatcher
0 libsystem_kernel.dylib 0x00007fff5dca720a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff5dca6724 mach_msg + 60
2 QtWebEngineCore 0x000000010d57532d 0x10b3d3000 + 35267373
3 QtWebEngineCore 0x000000010d57522f 0x10b3d3000 + 35267119
4 QtWebEngineCore 0x000000010d52905d 0x10b3d3000 + 34955357
5 QtWebEngineCore 0x000000010d552085 0x10b3d3000 + 35123333
6 QtWebEngineCore 0x000000010d5a49bc 0x10b3d3000 + 35461564
7 QtWebEngineCore 0x000000010d5e4717 0x10b3d3000 + 35723031
8 libsystem_pthread.dylib 0x00007fff5de78661 _pthread_body + 340
9 libsystem_pthread.dylib 0x00007fff5de7850d _pthread_start + 377
10 libsystem_pthread.dylib 0x00007fff5de77bf9 thread_start + 13
Thread 4:: DnsConfigService
0 libsystem_kernel.dylib 0x00007fff5dcb1bea kevent + 10
1 QtWebEngineCore 0x000000010d8369a9 0x10b3d3000 + 38156713
2 QtWebEngineCore 0x000000010d833cbd 0x10b3d3000 + 38145213
3 QtWebEngineCore 0x000000010d5eacdc 0x10b3d3000 + 35749084
4 QtWebEngineCore 0x000000010d552085 0x10b3d3000 + 35123333
5 QtWebEngineCore 0x000000010d5a49bc 0x10b3d3000 + 35461564
6 QtWebEngineCore 0x000000010d5e4717 0x10b3d3000 + 35723031
7 libsystem_pthread.dylib 0x00007fff5de78661 _pthread_body + 340
8 libsystem_pthread.dylib 0x00007fff5de7850d _pthread_start + 377
9 libsystem_pthread.dylib 0x00007fff5de77bf9 thread_start + 13
Thread 5:: TaskSchedulerServiceThread
0 libsystem_kernel.dylib 0x00007fff5dcb1bea kevent + 10
1 QtWebEngineCore 0x000000010d8369a9 0x10b3d3000 + 38156713
2 QtWebEngineCore 0x000000010d833cbd 0x10b3d3000 + 38145213
3 QtWebEngineCore 0x000000010d5eacc4 0x10b3d3000 + 35749060
4 QtWebEngineCore 0x000000010d552085 0x10b3d3000 + 35123333
5 QtWebEngineCore 0x000000010d593a74 0x10b3d3000 + 35392116
6 QtWebEngineCore 0x000000010d5a49bc 0x10b3d3000 + 35461564
7 QtWebEngineCore 0x000000010d5e4717 0x10b3d3000 + 35723031
8 libsystem_pthread.dylib 0x00007fff5de78661 _pthread_body + 340
9 libsystem_pthread.dylib 0x00007fff5de7850d _pthread_start + 377
10 libsystem_pthread.dylib 0x00007fff5de77bf9 thread_start + 13
Thread 6:: TaskSchedulerForegroundWorker
0 libsystem_kernel.dylib 0x00007fff5dca720a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff5dca6724 mach_msg + 60
2 QtWebEngineCore 0x000000010d57532d 0x10b3d3000 + 35267373
3 QtWebEngineCore 0x000000010d575421 0x10b3d3000 + 35267617
4 QtWebEngineCore 0x000000010d58cd28 0x10b3d3000 + 35364136
5 QtWebEngineCore 0x000000010d58d65b 0x10b3d3000 + 35366491
6 QtWebEngineCore 0x000000010d58d2c4 0x10b3d3000 + 35365572
7 QtWebEngineCore 0x000000010d5e4717 0x10b3d3000 + 35723031
8 libsystem_pthread.dylib 0x00007fff5de78661 _pthread_body + 340
9 libsystem_pthread.dylib 0x00007fff5de7850d _pthread_start + 377
10 libsystem_pthread.dylib 0x00007fff5de77bf9 thread_start + 13
Thread 7:: TaskSchedulerForegroundBlockingWorker
0 libsystem_kernel.dylib 0x00007fff5dca720a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff5dca6724 mach_msg + 60
2 QtWebEngineCore 0x000000010d57532d 0x10b3d3000 + 35267373
3 QtWebEngineCore 0x000000010d575421 0x10b3d3000 + 35267617
4 QtWebEngineCore 0x000000010d58cd28 0x10b3d3000 + 35364136
5 QtWebEngineCore 0x000000010d58d65b 0x10b3d3000 + 35366491
6 QtWebEngineCore 0x000000010d58d2c4 0x10b3d3000 + 35365572
7 QtWebEngineCore 0x000000010d5e4717 0x10b3d3000 + 35723031
8 libsystem_pthread.dylib 0x00007fff5de78661 _pthread_body + 340
9 libsystem_pthread.dylib 0x00007fff5de7850d _pthread_start + 377
10 libsystem_pthread.dylib 0x00007fff5de77bf9 thread_start + 13
Thread 8:: TaskSchedulerBackgroundWorker
0 libsystem_kernel.dylib 0x00007fff5dca720a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff5dca6724 mach_msg + 60
2 QtWebEngineCore 0x000000010d57532d 0x10b3d3000 + 35267373
3 QtWebEngineCore 0x000000010d575421 0x10b3d3000 + 35267617
4 QtWebEngineCore 0x000000010d58cd28 0x10b3d3000 + 35364136
5 QtWebEngineCore 0x000000010d58d65b 0x10b3d3000 + 35366491
6 QtWebEngineCore 0x000000010d58d234 0x10b3d3000 + 35365428
7 QtWebEngineCore 0x000000010d5e4717 0x10b3d3000 + 35723031
8 libsystem_pthread.dylib 0x00007fff5de78661 _pthread_body + 340
9 libsystem_pthread.dylib 0x00007fff5de7850d _pthread_start + 377
10 libsystem_pthread.dylib 0x00007fff5de77bf9 thread_start + 13
Thread 9:: TaskSchedulerBackgroundBlockingWorker
0 libsystem_kernel.dylib 0x00007fff5dca720a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff5dca6724 mach_msg + 60
2 QtWebEngineCore 0x000000010d57532d 0x10b3d3000 + 35267373
3 QtWebEngineCore 0x000000010d575421 0x10b3d3000 + 35267617
4 QtWebEngineCore 0x000000010d58cd28 0x10b3d3000 + 35364136
5 QtWebEngineCore 0x000000010d58d65b 0x10b3d3000 + 35366491
6 QtWebEngineCore 0x000000010d58d234 0x10b3d3000 + 35365428
7 QtWebEngineCore 0x000000010d5e4717 0x10b3d3000 + 35723031
8 libsystem_pthread.dylib 0x00007fff5de78661 _pthread_body + 340
9 libsystem_pthread.dylib 0x00007fff5de7850d _pthread_start + 377
10 libsystem_pthread.dylib 0x00007fff5de77bf9 thread_start + 13
Thread 10:: Chrome_IOThread
0 libsystem_kernel.dylib 0x00007fff5dcb1bea kevent + 10
1 QtWebEngineCore 0x000000010d8369a9 0x10b3d3000 + 38156713
2 QtWebEngineCore 0x000000010d833cbd 0x10b3d3000 + 38145213
3 QtWebEngineCore 0x000000010d5eacc4 0x10b3d3000 + 35749060
4 QtWebEngineCore 0x000000010d552085 0x10b3d3000 + 35123333
5 QtWebEngineCore 0x000000010cec0fe4 0x10b3d3000 + 28237796
6 QtWebEngineCore 0x000000010d5a49bc 0x10b3d3000 + 35461564
7 QtWebEngineCore 0x000000010d5e4717 0x10b3d3000 + 35723031
8 libsystem_pthread.dylib 0x00007fff5de78661 _pthread_body + 340
9 libsystem_pthread.dylib 0x00007fff5de7850d _pthread_start + 377
10 libsystem_pthread.dylib 0x00007fff5de77bf9 thread_start + 13
Thread 11:: TaskSchedulerSingleThreadSharedBackgroundBlocking0
0 libsystem_kernel.dylib 0x00007fff5dca720a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff5dca6724 mach_msg + 60
2 QtWebEngineCore 0x000000010d57532d 0x10b3d3000 + 35267373
3 QtWebEngineCore 0x000000010d57522f 0x10b3d3000 + 35267119
4 QtWebEngineCore 0x000000010d58cd1a 0x10b3d3000 + 35364122
5 QtWebEngineCore 0x000000010d58d3bf 0x10b3d3000 + 35365823
6 QtWebEngineCore 0x000000010d58d264 0x10b3d3000 + 35365476
7 QtWebEngineCore 0x000000010d5e4717 0x10b3d3000 + 35723031
8 libsystem_pthread.dylib 0x00007fff5de78661 _pthread_body + 340
9 libsystem_pthread.dylib 0x00007fff5de7850d _pthread_start + 377
10 libsystem_pthread.dylib 0x00007fff5de77bf9 thread_start + 13
Thread 12:: CompositorTileWorker1/74243
0 libsystem_kernel.dylib 0x00007fff5dcb0a16 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff5de79589 _pthread_cond_wait + 732
2 QtWebEngineCore 0x000000010d5e2fa8 0x10b3d3000 + 35717032
3 QtWebEngineCore 0x000000010e5694c8 0x10b3d3000 + 51995848
4 QtWebEngineCore 0x000000010d5a3694 0x10b3d3000 + 35456660
5 QtWebEngineCore 0x000000010d5e4717 0x10b3d3000 + 35723031
6 libsystem_pthread.dylib 0x00007fff5de78661 _pthread_body + 340
7 libsystem_pthread.dylib 0x00007fff5de7850d _pthread_start + 377
8 libsystem_pthread.dylib 0x00007fff5de77bf9 thread_start + 13
Thread 13:: AudioThread
0 libsystem_kernel.dylib 0x00007fff5dca720a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff5dca6724 mach_msg + 60
2 QtWebEngineCore 0x000000010d57532d 0x10b3d3000 + 35267373
3 QtWebEngineCore 0x000000010d57522f 0x10b3d3000 + 35267119
4 QtWebEngineCore 0x000000010d52905d 0x10b3d3000 + 34955357
5 QtWebEngineCore 0x000000010d552085 0x10b3d3000 + 35123333
6 QtWebEngineCore 0x000000010d5a49bc 0x10b3d3000 + 35461564
7 QtWebEngineCore 0x000000010d5e4717 0x10b3d3000 + 35723031
8 libsystem_pthread.dylib 0x00007fff5de78661 _pthread_body + 340
9 libsystem_pthread.dylib 0x00007fff5de7850d _pthread_start + 377
10 libsystem_pthread.dylib 0x00007fff5de77bf9 thread_start + 13
Thread 14:: NetworkConfigWatcher
0 libsystem_kernel.dylib 0x00007fff5dca720a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff5dca6724 mach_msg + 60
2 QtWebEngineCore 0x000000010d57532d 0x10b3d3000 + 35267373
3 QtWebEngineCore 0x000000010d57522f 0x10b3d3000 + 35267119
4 QtWebEngineCore 0x000000010d52905d 0x10b3d3000 + 34955357
5 QtWebEngineCore 0x000000010d552085 0x10b3d3000 + 35123333
6 QtWebEngineCore 0x000000010d5a49bc 0x10b3d3000 + 35461564
7 QtWebEngineCore 0x000000010d5e4717 0x10b3d3000 + 35723031
8 libsystem_pthread.dylib 0x00007fff5de78661 _pthread_body + 340
9 libsystem_pthread.dylib 0x00007fff5de7850d _pthread_start + 377
10 libsystem_pthread.dylib 0x00007fff5de77bf9 thread_start + 13
Thread 15:: Chrome_InProcGpuThread
0 libsystem_kernel.dylib 0x00007fff5dca720a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff5dca6724 mach_msg + 60
2 QtWebEngineCore 0x000000010d57532d 0x10b3d3000 + 35267373
3 QtWebEngineCore 0x000000010d529052 0x10b3d3000 + 34955346
4 QtWebEngineCore 0x000000010d552085 0x10b3d3000 + 35123333
5 QtWebEngineCore 0x000000010d5a49bc 0x10b3d3000 + 35461564
6 QtWebEngineCore 0x000000010d5e4717 0x10b3d3000 + 35723031
7 libsystem_pthread.dylib 0x00007fff5de78661 _pthread_body + 340
8 libsystem_pthread.dylib 0x00007fff5de7850d _pthread_start + 377
9 libsystem_pthread.dylib 0x00007fff5de77bf9 thread_start + 13
Thread 16:: Chrome_ChildIOThread
0 libsystem_kernel.dylib 0x00007fff5dcb1bea kevent + 10
1 QtWebEngineCore 0x000000010d8369a9 0x10b3d3000 + 38156713
2 QtWebEngineCore 0x000000010d833cbd 0x10b3d3000 + 38145213
3 QtWebEngineCore 0x000000010d5eacdc 0x10b3d3000 + 35749084
4 QtWebEngineCore 0x000000010d552085 0x10b3d3000 + 35123333
5 QtWebEngineCore 0x000000010d5a49bc 0x10b3d3000 + 35461564
6 QtWebEngineCore 0x000000010d5e4717 0x10b3d3000 + 35723031
7 libsystem_pthread.dylib 0x00007fff5de78661 _pthread_body + 340
8 libsystem_pthread.dylib 0x00007fff5de7850d _pthread_start + 377
9 libsystem_pthread.dylib 0x00007fff5de77bf9 thread_start + 13
Thread 17:: TaskSchedulerSingleThreadForegroundBlocking1
0 libsystem_kernel.dylib 0x00007fff5dca720a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff5dca6724 mach_msg + 60
2 QtWebEngineCore 0x000000010d57532d 0x10b3d3000 + 35267373
3 QtWebEngineCore 0x000000010d57522f 0x10b3d3000 + 35267119
4 QtWebEngineCore 0x000000010d58cd1a 0x10b3d3000 + 35364122
5 QtWebEngineCore 0x000000010d58d65b 0x10b3d3000 + 35366491
6 QtWebEngineCore 0x000000010d58d324 0x10b3d3000 + 35365668
7 QtWebEngineCore 0x000000010d5e4717 0x10b3d3000 + 35723031
8 libsystem_pthread.dylib 0x00007fff5de78661 _pthread_body + 340
9 libsystem_pthread.dylib 0x00007fff5de7850d _pthread_start + 377
10 libsystem_pthread.dylib 0x00007fff5de77bf9 thread_start + 13
Thread 18:: NetworkConfigWatcher
0 libsystem_kernel.dylib 0x00007fff5dca720a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff5dca6724 mach_msg + 60
2 QtWebEngineCore 0x000000010d57532d 0x10b3d3000 + 35267373
3 QtWebEngineCore 0x000000010d57522f 0x10b3d3000 + 35267119
4 QtWebEngineCore 0x000000010d52905d 0x10b3d3000 + 34955357
5 QtWebEngineCore 0x000000010d552085 0x10b3d3000 + 35123333
6 QtWebEngineCore 0x000000010d5a49bc 0x10b3d3000 + 35461564
7 QtWebEngineCore 0x000000010d5e4717 0x10b3d3000 + 35723031
8 libsystem_pthread.dylib 0x00007fff5de78661 _pthread_body + 340
9 libsystem_pthread.dylib 0x00007fff5de7850d _pthread_start + 377
10 libsystem_pthread.dylib 0x00007fff5de77bf9 thread_start + 13
Thread 19:: TaskSchedulerForegroundWorker
0 libsystem_kernel.dylib 0x00007fff5dca720a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff5dca6724 mach_msg + 60
2 QtWebEngineCore 0x000000010d57532d 0x10b3d3000 + 35267373
3 QtWebEngineCore 0x000000010d575421 0x10b3d3000 + 35267617
4 QtWebEngineCore 0x000000010d58cd28 0x10b3d3000 + 35364136
5 QtWebEngineCore 0x000000010d58d65b 0x10b3d3000 + 35366491
6 QtWebEngineCore 0x000000010d58d2c4 0x10b3d3000 + 35365572
7 QtWebEngineCore 0x000000010d5e4717 0x10b3d3000 + 35723031
8 libsystem_pthread.dylib 0x00007fff5de78661 _pthread_body + 340
9 libsystem_pthread.dylib 0x00007fff5de7850d _pthread_start + 377
10 libsystem_pthread.dylib 0x00007fff5de77bf9 thread_start + 13
Thread 20:
0 libsystem_kernel.dylib 0x00007fff5dcb0a16 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff5de79589 _pthread_cond_wait + 732
2 libopenblasp-r0.3.7.dylib 0x000000015d8b3c3b blas_thread_server + 619
3 libsystem_pthread.dylib 0x00007fff5de78661 _pthread_body + 340
4 libsystem_pthread.dylib 0x00007fff5de7850d _pthread_start + 377
5 libsystem_pthread.dylib 0x00007fff5de77bf9 thread_start + 13
Thread 21:
0 libsystem_kernel.dylib 0x00007fff5dcb128a __workq_kernreturn + 10
1 libsystem_pthread.dylib 0x00007fff5de7820e _pthread_wqthread + 1552
2 libsystem_pthread.dylib 0x00007fff5de77be9 start_wqthread + 13
Thread 22:
0 libsystem_kernel.dylib 0x00007fff5dcb0a16 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff5de79589 _pthread_cond_wait + 732
2 org.python.python 0x00000001002c20af PyThread_acquire_lock_timed + 351
3 org.python.python 0x000000010030d9df acquire_timed + 111
4 org.python.python 0x000000010030d75c lock_PyThread_acquire_lock + 44
5 org.python.python 0x00000001001a956a _PyMethodDef_RawFastCallKeywords + 714
6 org.python.python 0x00000001001af571 _PyMethodDescr_FastCallKeywords + 81
7 org.python.python 0x000000010027dbfe call_function + 814
8 org.python.python 0x000000010027a7fa _PyEval_EvalFrameDefault + 26538
9 org.python.python 0x000000010027ea2c _PyEval_EvalCodeWithName + 3276
10 org.python.python 0x00000001001a8879 _PyFunction_FastCallKeywords + 217
11 org.python.python 0x000000010027dbd4 call_function + 772
12 org.python.python 0x000000010027a7fa _PyEval_EvalFrameDefault + 26538
13 org.python.python 0x000000010027ea2c _PyEval_EvalCodeWithName + 3276
14 org.python.python 0x00000001001a8879 _PyFunction_FastCallKeywords + 217
15 org.python.python 0x000000010027dbd4 call_function + 772
16 org.python.python 0x000000010027a7fa _PyEval_EvalFrameDefault + 26538
17 org.python.python 0x00000001001a8d61 function_code_fastcall + 177
18 org.python.python 0x000000010027dbd4 call_function + 772
19 org.python.python 0x000000010027a7fa _PyEval_EvalFrameDefault + 26538
20 org.python.python 0x00000001001a8d61 function_code_fastcall + 177
21 org.python.python 0x000000010027dbd4 call_function + 772
22 org.python.python 0x000000010027a7fa _PyEval_EvalFrameDefault + 26538
23 org.python.python 0x00000001001a8d61 function_code_fastcall + 177
24 org.python.python 0x00000001001a9873 _PyObject_Call_Prepend + 131
25 org.python.python 0x00000001001a89d8 PyObject_Call + 136
26 org.python.python 0x000000010030e287 t_bootstrap + 71
27 org.python.python 0x00000001002c1d19 pythread_wrapper + 25
28 libsystem_pthread.dylib 0x00007fff5de78661 _pthread_body + 340
29 libsystem_pthread.dylib 0x00007fff5de7850d _pthread_start + 377
30 libsystem_pthread.dylib 0x00007fff5de77bf9 thread_start + 13
Thread 23:
0 libsystem_kernel.dylib 0x00007fff5dcb0a16 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff5de79589 _pthread_cond_wait + 732
2 libOpenMM.dylib 0x000000013fdf7d21 OpenMM::threadBody(void*) + 65
3 libsystem_pthread.dylib 0x00007fff5de78661 _pthread_body + 340
4 libsystem_pthread.dylib 0x00007fff5de7850d _pthread_start + 377
5 libsystem_pthread.dylib 0x00007fff5de77bf9 thread_start + 13
Thread 24:
0 libsystem_kernel.dylib 0x00007fff5dcb0a16 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff5de79589 _pthread_cond_wait + 732
2 libOpenMM.dylib 0x000000013fdf7d21 OpenMM::threadBody(void*) + 65
3 libsystem_pthread.dylib 0x00007fff5de78661 _pthread_body + 340
4 libsystem_pthread.dylib 0x00007fff5de7850d _pthread_start + 377
5 libsystem_pthread.dylib 0x00007fff5de77bf9 thread_start + 13
Thread 25:
0 libsystem_kernel.dylib 0x00007fff5dcb0a16 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff5de79589 _pthread_cond_wait + 732
2 libOpenMM.dylib 0x000000013fdf7d21 OpenMM::threadBody(void*) + 65
3 libsystem_pthread.dylib 0x00007fff5de78661 _pthread_body + 340
4 libsystem_pthread.dylib 0x00007fff5de7850d _pthread_start + 377
5 libsystem_pthread.dylib 0x00007fff5de77bf9 thread_start + 13
Thread 26:
0 libsystem_kernel.dylib 0x00007fff5dcb0a16 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff5de79589 _pthread_cond_wait + 732
2 libOpenMM.dylib 0x000000013fdf7d21 OpenMM::threadBody(void*) + 65
3 libsystem_pthread.dylib 0x00007fff5de78661 _pthread_body + 340
4 libsystem_pthread.dylib 0x00007fff5de7850d _pthread_start + 377
5 libsystem_pthread.dylib 0x00007fff5de77bf9 thread_start + 13
Thread 27:
0 libsystem_kernel.dylib 0x00007fff5dcb0a16 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff5de79589 _pthread_cond_wait + 732
2 libOpenMMOpenCL.dylib 0x000000014157c3cd threadBody(void*) + 109
3 libsystem_pthread.dylib 0x00007fff5de78661 _pthread_body + 340
4 libsystem_pthread.dylib 0x00007fff5de7850d _pthread_start + 377
5 libsystem_pthread.dylib 0x00007fff5de77bf9 thread_start + 13
Thread 0 crashed with X86 Thread State (64-bit):
rax: 0x0000000000000000 rbx: 0x00007fff965b7380 rcx: 0x0000000100631a48 rdx: 0x0000000000000000
rdi: 0x0000000000000307 rsi: 0x0000000000000006 rbp: 0x0000000100631a80 rsp: 0x0000000100631a48
r8: 0x0000000100631f48 r9: 0x0000000000000010 r10: 0x00007fff965b73c8 r11: 0x0000000000000206
r12: 0x0000000000000307 r13: 0x00007ffeefa7d1c0 r14: 0x0000000000000006 r15: 0x000000000000002d
rip: 0x00007fff5dcb0b66 rfl: 0x0000000000000206 cr2: 0x000000010d2b8000
Logical CPU: 0
Error Code: 0x02000148
Trap Number: 133
Binary Images:
0x10017c000 - 0x10017cff3 +edu.ucsf.cgl.ChimeraX (1.1.1 - 1.1.1.0) /programs/*/ChimeraX.app/Contents/MacOS/ChimeraX
0x100185000 - 0x100380fff +org.python.python (3.7.8, [c] 2001-2019 Python Software Foundation. - 3.7.8) /opt/sbgrid/*/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/Python
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0x1008c2000 - 0x1008c5ff3 +zlib.cpython-37m-darwin.so (0) /programs/*/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/zlib.cpython-37m-darwin.so
0x1008cf000 - 0x1008e3ff7 +libz.1.dylib (0) /opt/sbgrid/*/ChimeraX-1.1.1.app/Contents/lib/libz.1.dylib
0x10092c000 - 0x10092dff7 +_bz2.cpython-37m-darwin.so (0) /programs/*/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/_bz2.cpython-37m-darwin.so
0x100936000 - 0x100939fff +_lzma.cpython-37m-darwin.so (0) /programs/*/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/_lzma.cpython-37m-darwin.so
0x100944000 - 0x100944ffb +grp.cpython-37m-darwin.so (0) /programs/*/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/grp.cpython-37m-darwin.so
0x10094c000 - 0x100951ffb +math.cpython-37m-darwin.so (0) /programs/*/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/math.cpython-37m-darwin.so
0x10095d000 - 0x10095fff3 +_hashlib.cpython-37m-darwin.so (0) /programs/*/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/_hashlib.cpython-37m-darwin.so
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0x100978000 - 0x100988ff7 +_sha3.cpython-37m-darwin.so (0) /programs/*/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/_sha3.cpython-37m-darwin.so
0x100993000 - 0x100993ffb +_bisect.cpython-37m-darwin.so (0) /programs/*/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/_bisect.cpython-37m-darwin.so
0x10099b000 - 0x10099cffb +_random.cpython-37m-darwin.so (0) /programs/*/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/_random.cpython-37m-darwin.so
0x1009a4000 - 0x1009aaffb +_json.cpython-37m-darwin.so (0) /programs/*/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/_json.cpython-37m-darwin.so
0x1009b3000 - 0x1009b6fff +select.cpython-37m-darwin.so (0) /programs/*/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/select.cpython-37m-darwin.so
0x100a02000 - 0x100a5fff7 +libssl.1.1.dylib (0) /opt/sbgrid/*/ChimeraX-1.1.1.app/Contents/lib/libssl.1.1.dylib
0x100a8e000 - 0x100c55b13 +libcrypto.1.1.dylib (0) /opt/sbgrid/*/ChimeraX-1.1.1.app/Contents/lib/libcrypto.1.1.dylib
0x100d50000 - 0x100d61ffb +_pocketfft_internal.cpython-37m-darwin.so (0) /programs/*/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numpy/fft/_pocketfft_internal.cpython-37m-darwin.so
0x100d6a000 - 0x100d6bff7 +_appdirs.so (0) /programs/*/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/chimerax/core/_appdirs.so
0x100df7000 - 0x100e04ff7 +_ssl.cpython-37m-darwin.so (0) /programs/*/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/_ssl.cpython-37m-darwin.so
0x100e1a000 - 0x100e23ffb +_socket.cpython-37m-darwin.so (0) /programs/*/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/_socket.cpython-37m-darwin.so
0x100e35000 - 0x100e39ffb +_struct.cpython-37m-darwin.so (0) /programs/*/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/_struct.cpython-37m-darwin.so
0x100e47000 - 0x100e4bff7 +binascii.cpython-37m-darwin.so (0) /programs/*/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/binascii.cpython-37m-darwin.so
0x100e54000 - 0x100e62ff3 +_datetime.cpython-37m-darwin.so (0) /programs/*/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/_datetime.cpython-37m-darwin.so
0x101077000 - 0x101077ff3 +_scproxy.cpython-37m-darwin.so (0) /programs/*/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/_scproxy.cpython-37m-darwin.so
0x10108b000 - 0x1010c9ff7 +_decimal.cpython-37m-darwin.so (0) /programs/*/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/_decimal.cpython-37m-darwin.so
0x10112d000 - 0x10115aff3 +pyexpat.cpython-37m-darwin.so (0) /programs/*/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/pyexpat.cpython-37m-darwin.so
0x101172000 - 0x101173ff3 +_queue.cpython-37m-darwin.so (0) /programs/*/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/_queue.cpython-37m-darwin.so
0x10123c000 - 0x10123dfff +_posixsubprocess.cpython-37m-darwin.so (0) /programs/*/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/_posixsubprocess.cpython-37m-darwin.so
0x101316000 - 0x101328fff +_pickle.cpython-37m-darwin.so (0) /programs/*/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/_pickle.cpython-37m-darwin.so
0x101379000 - 0x10137cffb +_csv.cpython-37m-darwin.so (0) /programs/*/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/_csv.cpython-37m-darwin.so
0x101407000 - 0x10140eff3 +libqgif.dylib (0) /opt/sbgrid/*/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/PyQt5/Qt/plugins/imageformats/libqgif.dylib
0x101417000 - 0x10141effb +libqicns.dylib (0) /opt/sbgrid/*/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/PyQt5/Qt/plugins/imageformats/libqicns.dylib
0x101429000 - 0x10142afff +lapack_lite.cpython-37m-darwin.so (0) /programs/*/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numpy/linalg/lapack_lite.cpython-37m-darwin.so
0x101432000 - 0x101433ffb +libappdirs.dylib (0) /opt/sbgrid/*/ChimeraX-1.1.1.app/Contents/lib/libappdirs.dylib
0x10143b000 - 0x10143cfff +libXau.6.dylib (7) /programs/*/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/PIL/.dylibs/libXau.6.dylib
0x1014c7000 - 0x1014ccff3 +libqico.dylib (0) /opt/sbgrid/*/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/PyQt5/Qt/plugins/imageformats/libqico.dylib
0x1014d5000 - 0x1014daff7 +libqmacheif.dylib (0) /opt/sbgrid/*/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/PyQt5/Qt/plugins/imageformats/libqmacheif.dylib
0x10152a000 - 0x101560fff +libquadmath.0.dylib (0) /opt/sbgrid/*/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numpy/.dylibs/libquadmath.0.dylib
0x101574000 - 0x101589ff7 +libgcc_s.1.dylib (0) /opt/sbgrid/*/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numpy/.dylibs/libgcc_s.1.dylib
0x101599000 - 0x1015a5ffb +_philox.cpython-37m-darwin.so (0) /programs/*/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numpy/random/_philox.cpython-37m-darwin.so
0x1017b9000 - 0x1017beffb +libqmacjp2.dylib (0) /opt/sbgrid/*/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/PyQt5/Qt/plugins/imageformats/libqmacjp2.dylib
0x1017c7000 - 0x1017cbfff +libqsvg.dylib (0) /opt/sbgrid/*/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/PyQt5/Qt/plugins/imageformats/libqsvg.dylib
0x1017d4000 - 0x1017d8ffb +libqtga.dylib (0) /opt/sbgrid/*/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/PyQt5/Qt/plugins/imageformats/libqtga.dylib
0x1017e1000 - 0x1017e1ffb +_mac_util.so (0) /programs/*/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/chimerax/core/_mac_util.so
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0x11de6e000 - 0x11de87fff +kiwisolver.cpython-37m-darwin.so (0) /programs/*/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/kiwisolver.cpython-37m-darwin.so
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0x11e736000 - 0x11e73aff7 +libatomsearch.dylib (0) /opt/sbgrid/*/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/chimerax/atom_search/lib/libatomsearch.dylib
0x11e7e6000 - 0x11e7fbff7 +libgcc_s.1.dylib (0) /opt/sbgrid/*/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/scipy/.dylibs/libgcc_s.1.dylib
0x11f41a000 - 0x11f42cffb +numpy_formathandler.cpython-37m-darwin.so (0) /programs/*/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/PyOpenGL_accelerate-3.1.5-py3.7-macosx-10.13-x86_64.egg/OpenGL_accelerate/numpy_formathandler.cpython-37m-darwin.so
0x120b57000 - 0x120b5dfff +array.cpython-37m-darwin.so (0) /programs/*/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/array.cpython-37m-darwin.so
0x120b79000 - 0x120b93fff com.apple.security.csparser (3.0 - 58286.70.14) /System/Library/Frameworks/Security.framework/PlugIns/csparser.bundle/Contents/MacOS/csparser
0x122007000 - 0x122017ff3 +libOpenMMDrudeOpenCL.dylib (0) /programs/*/ChimeraX.app/Contents/lib/plugins/libOpenMMDrudeOpenCL.dylib
0x122024000 - 0x12202cffb +libOpenMMDrudeReference.dylib (0) /programs/*/ChimeraX.app/Contents/lib/plugins/libOpenMMDrudeReference.dylib
0x125e98000 - 0x125e9dffb +nones_formathandler.cpython-37m-darwin.so (0) /programs/*/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/PyOpenGL_accelerate-3.1.5-py3.7-macosx-10.13-x86_64.egg/OpenGL_accelerate/nones_formathandler.cpython-37m-darwin.so
0x126019000 - 0x126021ff3 +_elementtree.cpython-37m-darwin.so (0) /programs/*/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/_elementtree.cpython-37m-darwin.so
0x12764a000 - 0x12765eff3 +_ufuncs_cxx.cpython-37m-darwin.so (0) /programs/*/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/scipy/special/_ufuncs_cxx.cpython-37m-darwin.so
0x127672000 - 0x12767dff7 +_flinalg.cpython-37m-darwin.so (0) /programs/*/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/scipy/linalg/_flinalg.cpython-37m-darwin.so
0x1278df000 - 0x1278efff3 +_chem_group.cpython-37m-darwin.so (0) /programs/*/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/chimerax/chem_group/_chem_group.cpython-37m-darwin.so
0x1279ed000 - 0x1279f9ff3 +_ellip_harm_2.cpython-37m-darwin.so (0) /programs/*/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/scipy/special/_ellip_harm_2.cpython-37m-darwin.so
0x12837f000 - 0x12838cfff +_distance_wrap.cpython-37m-darwin.so (0) /programs/*/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/scipy/spatial/_distance_wrap.cpython-37m-darwin.so
0x128982000 - 0x1289b1ff3 +libccp4.dylib (0) /opt/sbgrid/*/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/chimerax/clipper/libccp4.dylib
0x128ddd000 - 0x128df0fff +libopenmm.dylib (0) /opt/sbgrid/*/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/chimerax/isolde/libopenmm.dylib
0x12a33c000 - 0x12a355ff7 +_traversal.cpython-37m-darwin.so (0) /programs/*/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/scipy/sparse/csgraph/_traversal.cpython-37m-darwin.so
0x12bc89000 - 0x12bcabfff +_path.cpython-37m-darwin.so (0) /programs/*/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/matplotlib/_path.cpython-37m-darwin.so
0x12c7a5000 - 0x12c7bfffb +_tools.cpython-37m-darwin.so (0) /programs/*/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/scipy/sparse/csgraph/_tools.cpython-37m-darwin.so
0x12c925000 - 0x12c978ff3 +libOpenMMCPU.dylib (0) /programs/*/ChimeraX.app/Contents/lib/plugins/libOpenMMCPU.dylib
0x12c9ab000 - 0x12c9c8fff +_min_spanning_tree.cpython-37m-darwin.so (0) /programs/*/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/scipy/sparse/csgraph/_min_spanning_tree.cpython-37m-darwin.so
0x12cbe5000 - 0x12cc1bfff +libquadmath.0.dylib (0) /opt/sbgrid/*/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/scipy/.dylibs/libquadmath.0.dylib
0x12cd80000 - 0x12cda4fff +_solve_toeplitz.cpython-37m-darwin.so (0) /programs/*/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/scipy/linalg/_solve_toeplitz.cpython-37m-darwin.so
0x12cdc3000 - 0x12cde1ff3 +_matching.cpython-37m-darwin.so (0) /programs/*/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/scipy/sparse/csgraph/_matching.cpython-37m-darwin.so
0x12d81f000 - 0x12d85bff3 +libclipper_cx.dylib (0) /opt/sbgrid/*/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/chimerax/clipper/libclipper_cx.dylib
0x12dce2000 - 0x12dcfcff7 +_voronoi.cpython-37m-darwin.so (0) /programs/*/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/scipy/spatial/_voronoi.cpython-37m-darwin.so
0x12dda2000 - 0x12ddcafff +mcsplit.cpython-37m-darwin.so (0) /programs/*/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/chimerax/isolde/mcsplit.cpython-37m-darwin.so
0x131f02000 - 0x131fbffc7 +specfun.cpython-37m-darwin.so (0) /programs/*/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/scipy/special/specfun.cpython-37m-darwin.so
0x136ed4000 - 0x136f7dfff +pypocketfft.cpython-37m-darwin.so (0) /programs/*/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/scipy/fft/_pocketfft/pypocketfft.cpython-37m-darwin.so
0x137006000 - 0x13705fff7 +_fblas.cpython-37m-darwin.so (0) /programs/*/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/scipy/linalg/_fblas.cpython-37m-darwin.so
0x13709e000 - 0x1370b9ff7 +_hausdorff.cpython-37m-darwin.so (0) /programs/*/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/scipy/spatial/_hausdorff.cpython-37m-darwin.so
0x137434000 - 0x137468ff3 +_decomp_update.cpython-37m-darwin.so (0) /programs/*/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/scipy/linalg/_decomp_update.cpython-37m-darwin.so
0x13760c000 - 0x137674fff +libOpenMMAmoebaReference.dylib (0) /programs/*/ChimeraX.app/Contents/lib/plugins/libOpenMMAmoebaReference.dylib
0x1378ac000 - 0x13792fffb +libmolc.dylib (0) /programs/*/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/chimerax/isolde/libmolc.dylib
0x1379d5000 - 0x1379fafff +cython_blas.cpython-37m-darwin.so (0) /programs/*/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/scipy/linalg/cython_blas.cpython-37m-darwin.so
0x137a1c000 - 0x137a88ff7 +cython_lapack.cpython-37m-darwin.so (0) /programs/*/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/scipy/linalg/cython_lapack.cpython-37m-darwin.so
0x137bd5000 - 0x137c38fff +_csparsetools.cpython-37m-darwin.so (0) /programs/*/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/scipy/sparse/_csparsetools.cpython-37m-darwin.so
0x137c6a000 - 0x137cbaff3 +_shortest_path.cpython-37m-darwin.so (0) /programs/*/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/scipy/sparse/csgraph/_shortest_path.cpython-37m-darwin.so
0x137d55000 - 0x137d89ff7 +_fitpack.cpython-37m-darwin.so (0) /programs/*/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/scipy/interpolate/_fitpack.cpython-37m-darwin.so
0x137e95000 - 0x137ebcfff +_flow.cpython-37m-darwin.so (0) /programs/*/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/scipy/sparse/csgraph/_flow.cpython-37m-darwin.so
0x137edd000 - 0x137f06ffb +_reordering.cpython-37m-darwin.so (0) /programs/*/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/scipy/sparse/csgraph/_reordering.cpython-37m-darwin.so
0x137f28000 - 0x137f52ff7 +_bspl.cpython-37m-darwin.so (0) /programs/*/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/scipy/interpolate/_bspl.cpython-37m-darwin.so
0x138a8c000 - 0x138ae8fff +dfitpack.cpython-37m-darwin.so (0) /programs/*/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/scipy/interpolate/dfitpack.cpython-37m-darwin.so
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0x13964c000 - 0x139688ffb +interpnd.cpython-37m-darwin.so (0) /programs/*/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/scipy/interpolate/interpnd.cpython-37m-darwin.so
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0x13bf09000 - 0x13bfbbff3 +libmmdb2.dylib (0) /opt/sbgrid/*/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/chimerax/clipper/libmmdb2.dylib
0x13c469000 - 0x13c875fff +clipper_python.cpython-37m-darwin.so (0) /programs/*/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/chimerax/clipper/clipper_python.cpython-37m-darwin.so
0x13d1b5000 - 0x13d32fffb +libclipper.dylib (0) /opt/sbgrid/*/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/chimerax/clipper/libclipper.dylib
0x13d47b000 - 0x13f803fc7 +mkl_custom.dylib (0) /opt/sbgrid/*/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/chimerax/clipper/mkl_custom.dylib
0x13fa1e000 - 0x13fc62fff +_openmm.cpython-37m-darwin.so (???) /programs/*/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/simtk/openmm/_openmm.cpython-37m-darwin.so
0x13fd8a000 - 0x13ff8dff3 +libOpenMM.dylib (0) /opt/sbgrid/*/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/libOpenMM.dylib
0x1405c6000 - 0x14068dff7 +ft2font.cpython-37m-darwin.so (0) /programs/*/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/matplotlib/ft2font.cpython-37m-darwin.so
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0x140ca5000 - 0x140ce4ff7 +_backend_agg.cpython-37m-darwin.so (0) /programs/*/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/matplotlib/backends/_backend_agg.cpython-37m-darwin.so
0x14155a000 - 0x14174fff7 +libOpenMMOpenCL.dylib (0) /programs/*/ChimeraX.app/Contents/lib/plugins/libOpenMMOpenCL.dylib
0x1417a5000 - 0x14191bfff +_ufuncs.cpython-37m-darwin.so (0) /programs/*/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/scipy/special/_ufuncs.cpython-37m-darwin.so
0x1419a2000 - 0x141ab9ff7 +libgfortran.3.dylib (0) /opt/sbgrid/*/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/scipy/.dylibs/libgfortran.3.dylib
0x15d57d000 - 0x160fe8ae7 +libopenblasp-r0.3.7.dylib (0) /opt/sbgrid/*/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/scipy/.dylibs/libopenblasp-r0.3.7.dylib
0x1632f2000 - 0x1633d2fff +_flapack.cpython-37m-darwin.so (0) /programs/*/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/scipy/linalg/_flapack.cpython-37m-darwin.so
0x163477000 - 0x163878ff7 +_sparsetools.cpython-37m-darwin.so (0) /programs/*/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/scipy/sparse/_sparsetools.cpython-37m-darwin.so
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0x7fff31d76000 - 0x7fff31d7affb com.apple.agl (3.3.1 - AGL-3.3.1) /System/Library/Frameworks/AGL.framework/Versions/A/AGL
0x7fff31d7b000 - 0x7fff31f5bff3 com.apple.avfoundation (2.0 - 1536.36) /System/Library/Frameworks/AVFoundation.framework/Versions/A/AVFoundation
0x7fff31f5c000 - 0x7fff32015fff com.apple.audio.AVFAudio (1.0 - ???) /System/Library/Frameworks/AVFoundation.framework/Versions/A/Frameworks/AVFAudio.framework/Versions/A/AVFAudio
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0x7fff5c84d000 - 0x7fff5c84efff liblangid.dylib (128) /usr/lib/liblangid.dylib
0x7fff5c84f000 - 0x7fff5c868ffb liblzma.5.dylib (10) /usr/lib/liblzma.5.dylib
0x7fff5c869000 - 0x7fff5c87fff7 libmarisa.dylib (9) /usr/lib/libmarisa.dylib
0x7fff5c880000 - 0x7fff5c92ffff libmecab.1.0.0.dylib (779.7.6) /usr/lib/libmecab.1.0.0.dylib
0x7fff5c930000 - 0x7fff5cb58ff7 libmecabra.dylib (779.7.6) /usr/lib/libmecabra.dylib
0x7fff5cd30000 - 0x7fff5ceabfff libnetwork.dylib (1229.70.2) /usr/lib/libnetwork.dylib
0x7fff5cf32000 - 0x7fff5d3207e7 libobjc.A.dylib (723) /usr/lib/libobjc.A.dylib
0x7fff5d321000 - 0x7fff5d322fff libodfde.dylib (24.50.1) /usr/lib/libodfde.dylib
0x7fff5d333000 - 0x7fff5d337fff libpam.2.dylib (22) /usr/lib/libpam.2.dylib
0x7fff5d33a000 - 0x7fff5d36efff libpcap.A.dylib (79.20.1) /usr/lib/libpcap.A.dylib
0x7fff5d3ed000 - 0x7fff5d409ffb libresolv.9.dylib (65.1) /usr/lib/libresolv.9.dylib
0x7fff5d40b000 - 0x7fff5d444ff3 libsandbox.1.dylib (765.70.1) /usr/lib/libsandbox.1.dylib
0x7fff5d445000 - 0x7fff5d457fff libsasl2.2.dylib (211) /usr/lib/libsasl2.2.dylib
0x7fff5d458000 - 0x7fff5d459ff3 libspindump.dylib (252) /usr/lib/libspindump.dylib
0x7fff5d45a000 - 0x7fff5d5edff7 libsqlite3.dylib (274.8.1) /usr/lib/libsqlite3.dylib
0x7fff5d649000 - 0x7fff5d69cffb libssl.35.dylib (22.50.3) /usr/lib/libssl.35.dylib
0x7fff5d7c1000 - 0x7fff5d821ff3 libusrtcp.dylib (1229.70.2) /usr/lib/libusrtcp.dylib
0x7fff5d822000 - 0x7fff5d825ffb libutil.dylib (51.20.1) /usr/lib/libutil.dylib
0x7fff5d826000 - 0x7fff5d833ff3 libxar.1.dylib (417.1) /usr/lib/libxar.1.dylib
0x7fff5d837000 - 0x7fff5d91efff libxml2.2.dylib (31.15) /usr/lib/libxml2.2.dylib
0x7fff5d91f000 - 0x7fff5d947fff libxslt.1.dylib (15.16) /usr/lib/libxslt.1.dylib
0x7fff5d948000 - 0x7fff5d95affb libz.1.dylib (70) /usr/lib/libz.1.dylib
0x7fff5d9f6000 - 0x7fff5d9faff7 libcache.dylib (80) /usr/lib/system/libcache.dylib
0x7fff5d9fb000 - 0x7fff5da05ff3 libcommonCrypto.dylib (60118.50.1) /usr/lib/system/libcommonCrypto.dylib
0x7fff5da06000 - 0x7fff5da0dfff libcompiler_rt.dylib (62) /usr/lib/system/libcompiler_rt.dylib
0x7fff5da0e000 - 0x7fff5da17ffb libcopyfile.dylib (146.50.5) /usr/lib/system/libcopyfile.dylib
0x7fff5da18000 - 0x7fff5da9dffb libcorecrypto.dylib (562.70.3) /usr/lib/system/libcorecrypto.dylib
0x7fff5db25000 - 0x7fff5db5eff7 libdispatch.dylib (913.60.3) /usr/lib/system/libdispatch.dylib
0x7fff5db5f000 - 0x7fff5db7cff7 libdyld.dylib (551.5) /usr/lib/system/libdyld.dylib
0x7fff5db7d000 - 0x7fff5db7dffb libkeymgr.dylib (28) /usr/lib/system/libkeymgr.dylib
0x7fff5db7e000 - 0x7fff5db8aff3 libkxld.dylib (4570.71.57) /usr/lib/system/libkxld.dylib
0x7fff5db8b000 - 0x7fff5db8bff7 liblaunch.dylib (1205.70.12) /usr/lib/system/liblaunch.dylib
0x7fff5db8c000 - 0x7fff5db90ffb libmacho.dylib (906) /usr/lib/system/libmacho.dylib
0x7fff5db91000 - 0x7fff5db93fff libquarantine.dylib (86.70.1) /usr/lib/system/libquarantine.dylib
0x7fff5db94000 - 0x7fff5db95ff3 libremovefile.dylib (45) /usr/lib/system/libremovefile.dylib
0x7fff5db96000 - 0x7fff5dbadfff libsystem_asl.dylib (356.70.1) /usr/lib/system/libsystem_asl.dylib
0x7fff5dbae000 - 0x7fff5dbaefff libsystem_blocks.dylib (67) /usr/lib/system/libsystem_blocks.dylib
0x7fff5dbaf000 - 0x7fff5dc38ff7 libsystem_c.dylib (1244.50.9) /usr/lib/system/libsystem_c.dylib
0x7fff5dc39000 - 0x7fff5dc3cffb libsystem_configuration.dylib (963.50.9) /usr/lib/system/libsystem_configuration.dylib
0x7fff5dc3d000 - 0x7fff5dc40ffb libsystem_coreservices.dylib (51) /usr/lib/system/libsystem_coreservices.dylib
0x7fff5dc41000 - 0x7fff5dc42fff libsystem_darwin.dylib (1244.50.9) /usr/lib/system/libsystem_darwin.dylib
0x7fff5dc43000 - 0x7fff5dc49ffb libsystem_dnssd.dylib (878.70.4) /usr/lib/system/libsystem_dnssd.dylib
0x7fff5dc4a000 - 0x7fff5dc93ff7 libsystem_info.dylib (517.30.1) /usr/lib/system/libsystem_info.dylib
0x7fff5dc94000 - 0x7fff5dcbaff7 libsystem_kernel.dylib (4570.71.57) /usr/lib/system/libsystem_kernel.dylib
0x7fff5dcbb000 - 0x7fff5dd06fcb libsystem_m.dylib (3147.50.1) /usr/lib/system/libsystem_m.dylib
0x7fff5dd07000 - 0x7fff5dd26ff7 libsystem_malloc.dylib (140.50.7) /usr/lib/system/libsystem_malloc.dylib
0x7fff5dd27000 - 0x7fff5de57ff7 libsystem_network.dylib (1229.70.2) /usr/lib/system/libsystem_network.dylib
0x7fff5de58000 - 0x7fff5de62ffb libsystem_networkextension.dylib (767.70.2) /usr/lib/system/libsystem_networkextension.dylib
0x7fff5de63000 - 0x7fff5de6cff3 libsystem_notify.dylib (172) /usr/lib/system/libsystem_notify.dylib
0x7fff5de6d000 - 0x7fff5de74ff7 libsystem_platform.dylib (161.50.1) /usr/lib/system/libsystem_platform.dylib
0x7fff5de75000 - 0x7fff5de80fff libsystem_pthread.dylib (301.50.1) /usr/lib/system/libsystem_pthread.dylib
0x7fff5de81000 - 0x7fff5de84fff libsystem_sandbox.dylib (765.70.1) /usr/lib/system/libsystem_sandbox.dylib
0x7fff5de85000 - 0x7fff5de86ff3 libsystem_secinit.dylib (30) /usr/lib/system/libsystem_secinit.dylib
0x7fff5de87000 - 0x7fff5de8eff7 libsystem_symptoms.dylib (820.60.3) /usr/lib/system/libsystem_symptoms.dylib
0x7fff5de8f000 - 0x7fff5dea2fff libsystem_trace.dylib (829.70.1) /usr/lib/system/libsystem_trace.dylib
0x7fff5dea4000 - 0x7fff5dea9ff7 libunwind.dylib (35.3) /usr/lib/system/libunwind.dylib
0x7fff5deaa000 - 0x7fff5ded7ff7 libxpc.dylib (1205.70.12) /usr/lib/system/libxpc.dylib
External Modification Summary:
Calls made by other processes targeting this process:
task_for_pid: 3
thread_create: 0
thread_set_state: 0
Calls made by this process:
task_for_pid: 0
thread_create: 0
thread_set_state: 0
Calls made by all processes on this machine:
task_for_pid: 1210
thread_create: 0
thread_set_state: 0
VM Region Summary:
ReadOnly portion of Libraries: Total=840.5M resident=0K(0%) swapped_out_or_unallocated=840.5M(100%)
Writable regions: Total=3.9G written=0K(0%) resident=0K(0%) swapped_out=0K(0%) unallocated=3.9G(100%)
VIRTUAL REGION
REGION TYPE SIZE COUNT (non-coalesced)
=========== ======= =======
Accelerate framework 512K 4
Activity Tracing 256K 2
CG backing stores 38.0M 8
CG image 408K 34
CoreAnimation 260K 36
CoreGraphics 8K 2
CoreImage 304K 45
CoreUI image data 5760K 34
CoreUI image file 216K 6
Dispatch continuations 8192K 2
Foundation 62.4M 4
Image IO 72K 4
Kernel Alloc Once 8K 2
MALLOC 2.3G 312
MALLOC guard page 48K 11
MALLOC_LARGE (reserved) 256K 3 reserved VM address space (unallocated)
Memory Tag 242 12K 2
Memory Tag 251 36K 3
OpenCL 863.4M 20
OpenCL (reserved) 10.5M 11 reserved VM address space (unallocated)
OpenGL GLSL 512K 7
PROTECTED_MEMORY 4K 2
STACK GUARD 108K 28
Stack 153.7M 29
Stack Guard 56.0M 2
VM_ALLOCATE 433.6M 281
VM_ALLOCATE (reserved) 32.0M 2 reserved VM address space (unallocated)
__DATA 49.8M 593
__FONT_DATA 4K 2
__GLSLBUILTINS 2588K 2
__LINKEDIT 245.3M 219
__TEXT 595.2M 549
__UNICODE 560K 2
mapped file 80.5M 79
shared memory 2764K 20
=========== ======= =======
TOTAL 4.9G 2327
TOTAL, minus reserved VM space 4.9G 2327
Log:
UCSF ChimeraX version: 1.1.1 (2020-10-07)
© 2016-2020 Regents of the University of California. All rights reserved.
How to cite UCSF ChimeraX
OpenGL version: 4.1 INTEL-10.36.26
OpenGL renderer: Intel(R) Iris(TM) Plus Graphics 640
OpenGL vendor: Intel Inc.Hardware:
Hardware Overview:
Model Name: MacBook Pro
Model Identifier: MacBookPro14,1
Processor Name: Intel Core i7
Processor Speed: 2.5 GHz
Number of Processors: 1
Total Number of Cores: 2
L2 Cache (per Core): 256 KB
L3 Cache: 4 MB
Memory: 16 GB
Boot ROM Version: 198.0.0.0.0
SMC Version (system): 2.43f6
Software:
System Software Overview:
System Version: macOS 10.13.6 (17G9016)
Kernel Version: Darwin 17.7.0
Time since boot: 27 minutes
Graphics/Displays:
Intel Iris Plus Graphics 640:
Chipset Model: Intel Iris Plus Graphics 640
Type: GPU
Bus: Built-In
VRAM (Dynamic, Max): 1536 MB
Vendor: Intel
Device ID: 0x5926
Revision ID: 0x0006
Metal: Supported, feature set macOS GPUFamily1 v3
Displays:
Color LCD:
Display Type: Built-In Retina LCD
Resolution: 2560 x 1600 Retina
Framebuffer Depth: 24-Bit Color (ARGB8888)
Main Display: Yes
Mirror: Off
Online: Yes
Rotation: Supported
Automatically Adjust Brightness: No
PyQt version: 5.12.3
Compiled Qt version: 5.12.4
Runtime Qt version: 5.12.9
Installed Packages:
alabaster: 0.7.12
appdirs: 1.4.4
appnope: 0.1.0
Babel: 2.8.0
backcall: 0.2.0
blockdiag: 2.0.1
certifi: 2020.6.20
chardet: 3.0.4
ChimeraX-AddH: 2.1.1
ChimeraX-AlignmentAlgorithms: 2.0
ChimeraX-AlignmentHdrs: 3.2
ChimeraX-AlignmentMatrices: 2.0
ChimeraX-Alignments: 2.1
ChimeraX-Arrays: 1.0
ChimeraX-Atomic: 1.6.1
ChimeraX-AtomSearch: 2.0
ChimeraX-AxesPlanes: 2.0
ChimeraX-BasicActions: 1.1
ChimeraX-BILD: 1.0
ChimeraX-BlastProtein: 1.0.1
ChimeraX-BondRot: 2.0
ChimeraX-BugReporter: 1.0
ChimeraX-BuildStructure: 2.0
ChimeraX-Bumps: 1.0
ChimeraX-BundleBuilder: 1.0
ChimeraX-ButtonPanel: 1.0
ChimeraX-CageBuilder: 1.0
ChimeraX-CellPack: 1.0
ChimeraX-Centroids: 1.1
ChimeraX-ChemGroup: 2.0
ChimeraX-Clashes: 2.0
ChimeraX-Clipper: 0.15.0
ChimeraX-ColorActions: 1.0
ChimeraX-ColorGlobe: 1.0
ChimeraX-CommandLine: 1.1.3
ChimeraX-ConnectStructure: 2.0
ChimeraX-Contacts: 1.0
ChimeraX-Core: 1.1.1
ChimeraX-CoreFormats: 1.0
ChimeraX-coulombic: 1.0.1
ChimeraX-Crosslinks: 1.0
ChimeraX-Crystal: 1.0
ChimeraX-DataFormats: 1.0
ChimeraX-Dicom: 1.0
ChimeraX-DistMonitor: 1.1
ChimeraX-DistUI: 1.0
ChimeraX-Dssp: 2.0
ChimeraX-EMDB-SFF: 1.0
ChimeraX-ExperimentalCommands: 1.0
ChimeraX-FileHistory: 1.0
ChimeraX-FunctionKey: 1.0
ChimeraX-Geometry: 1.1
ChimeraX-gltf: 1.0
ChimeraX-Graphics: 1.0
ChimeraX-Hbonds: 2.0
ChimeraX-Help: 1.0
ChimeraX-HKCage: 1.0
ChimeraX-IHM: 1.0
ChimeraX-ImageFormats: 1.0
ChimeraX-IMOD: 1.0
ChimeraX-IO: 1.0
ChimeraX-ISOLDE: 1.1.0
ChimeraX-Label: 1.0
ChimeraX-ListInfo: 1.0
ChimeraX-Log: 1.1.1
ChimeraX-LookingGlass: 1.1
ChimeraX-Map: 1.0.1
ChimeraX-MapData: 2.0
ChimeraX-MapEraser: 1.0
ChimeraX-MapFilter: 2.0
ChimeraX-MapFit: 2.0
ChimeraX-MapSeries: 2.0
ChimeraX-Markers: 1.0
ChimeraX-Mask: 1.0
ChimeraX-MatchMaker: 1.1
ChimeraX-MDcrds: 2.0
ChimeraX-MedicalToolbar: 1.0.1
ChimeraX-Meeting: 1.0
ChimeraX-MLP: 1.0
ChimeraX-mmCIF: 2.2
ChimeraX-MMTF: 2.0
ChimeraX-Modeller: 1.0
ChimeraX-ModelPanel: 1.0
ChimeraX-ModelSeries: 1.0
ChimeraX-Mol2: 2.0
ChimeraX-Morph: 1.0
ChimeraX-MouseModes: 1.0
ChimeraX-Movie: 1.0
ChimeraX-Neuron: 1.0
ChimeraX-Nucleotides: 2.0
ChimeraX-OpenCommand: 1.2.1
ChimeraX-PDB: 2.1
ChimeraX-PDBBio: 1.0
ChimeraX-PickBlobs: 1.0
ChimeraX-Positions: 1.0
ChimeraX-PresetMgr: 1.0
ChimeraX-PubChem: 2.0
ChimeraX-Read-Pbonds: 1.0
ChimeraX-Registration: 1.1
ChimeraX-RemoteControl: 1.0
ChimeraX-ResidueFit: 1.0
ChimeraX-RestServer: 1.0
ChimeraX-RNALayout: 1.0
ChimeraX-RotamerLibMgr: 2.0
ChimeraX-RotamerLibsDunbrack: 2.0
ChimeraX-RotamerLibsDynameomics: 2.0
ChimeraX-RotamerLibsRichardson: 2.0
ChimeraX-SaveCommand: 1.2
ChimeraX-SchemeMgr: 1.0
ChimeraX-SDF: 2.0
ChimeraX-Segger: 1.0
ChimeraX-Segment: 1.0
ChimeraX-SeqView: 2.2
ChimeraX-Shape: 1.0.1
ChimeraX-Shell: 1.0
ChimeraX-Shortcuts: 1.0
ChimeraX-ShowAttr: 1.0
ChimeraX-ShowSequences: 1.0
ChimeraX-SideView: 1.0
ChimeraX-Smiles: 2.0
ChimeraX-SmoothLines: 1.0
ChimeraX-SpaceNavigator: 1.0
ChimeraX-StdCommands: 1.0.4
ChimeraX-STL: 1.0
ChimeraX-Storm: 1.0
ChimeraX-Struts: 1.0
ChimeraX-Surface: 1.0
ChimeraX-SwapAA: 2.0
ChimeraX-SwapRes: 2.0
ChimeraX-TapeMeasure: 1.0
ChimeraX-Test: 1.0
ChimeraX-Toolbar: 1.0
ChimeraX-ToolshedUtils: 1.0
ChimeraX-Tug: 1.0
ChimeraX-UI: 1.2.3
ChimeraX-uniprot: 2.0
ChimeraX-ViewDockX: 1.0
ChimeraX-Vive: 1.1
ChimeraX-VolumeMenu: 1.0
ChimeraX-VTK: 1.0
ChimeraX-WavefrontOBJ: 1.0
ChimeraX-WebCam: 1.0
ChimeraX-WebServices: 1.0
ChimeraX-Zone: 1.0
colorama: 0.4.3
comtypes: 1.1.7
cxservices: 1.0
cycler: 0.10.0
Cython: 0.29.20
decorator: 4.4.2
distlib: 0.3.1
docutils: 0.16
filelock: 3.0.12
funcparserlib: 0.3.6
grako: 3.16.5
h5py: 2.10.0
html2text: 2020.1.16
idna: 2.10
ihm: 0.16
imagecodecs: 2020.5.30
imagecodecs-lite: 2020.1.31
imagesize: 1.2.0
ipykernel: 5.3.0
ipython: 7.15.0
ipython-genutils: 0.2.0
jedi: 0.17.2
Jinja2: 2.11.2
jupyter-client: 6.1.3
jupyter-core: 4.6.3
kiwisolver: 1.2.0
line-profiler: 2.1.2
lxml: 4.5.1
MarkupSafe: 1.1.1
matplotlib: 3.2.1
msgpack: 1.0.0
netifaces: 0.10.9
networkx: 2.4
numexpr: 2.7.1
numpy: 1.18.5
numpydoc: 1.0.0
openvr: 1.12.501
packaging: 20.4
parso: 0.7.1
pexpect: 4.8.0
pickleshare: 0.7.5
Pillow: 7.1.2
pip: 20.2.2
pkginfo: 1.5.0.1
prompt-toolkit: 3.0.7
psutil: 5.7.0
ptyprocess: 0.6.0
pycollada: 0.7.1
pydicom: 2.0.0
Pygments: 2.6.1
PyOpenGL: 3.1.5
PyOpenGL-accelerate: 3.1.5
pyparsing: 2.4.7
PyQt5-commercial: 5.12.3
PyQt5-sip: 4.19.19
PyQtWebEngine-commercial: 5.12.1
python-dateutil: 2.8.1
pytz: 2020.1
pyzmq: 19.0.2
qtconsole: 4.7.4
QtPy: 1.9.0
RandomWords: 0.3.0
requests: 2.24.0
scipy: 1.4.1
setuptools: 49.4.0
sfftk-rw: 0.6.6.dev0
six: 1.15.0
snowballstemmer: 2.0.0
sortedcontainers: 2.2.2
Sphinx: 3.1.1
sphinxcontrib-applehelp: 1.0.2
sphinxcontrib-blockdiag: 2.0.0
sphinxcontrib-devhelp: 1.0.2
sphinxcontrib-htmlhelp: 1.0.3
sphinxcontrib-jsmath: 1.0.1
sphinxcontrib-qthelp: 1.0.3
sphinxcontrib-serializinghtml: 1.1.4
suds-jurko: 0.6
tables: 3.6.1
tifffile: 2020.6.3
tinyarray: 1.2.2
tornado: 6.0.4
traitlets: 5.0.4
urllib3: 1.25.10
wcwidth: 0.2.5
webcolors: 1.11.1
wheel: 0.34.2
Change History (2)
comment:1 by , 5 years ago
| Cc: | added |
|---|---|
| Component: | Unassigned → Third Party |
| Owner: | set to |
| Platform: | → all |
| Project: | → ChimeraX |
| Status: | new → assigned |
| Summary: | ChimeraX bug report submission → OpenMM crash uploading OpenCL array |
comment:2 by , 3 years ago
| Resolution: | → can't reproduce |
|---|---|
| Status: | assigned → closed |
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