![[ChimeraX Issue Tracking System]](/trac/ChimeraX/chrome/site/ChimeraX-icon.svg){kind=icon}
Opened 5 years ago
Closed 5 years ago
#4043 closed defect (nonchimerax)
Graphics hardware encountered an error and was reset
| Reported by: | Owned by: | Tom Goddard | |
|---|---|---|---|
| Priority: | normal | Milestone: | |
| Component: | Graphics | Version: | |
| Keywords: | Cc: | ||
| Blocked By: | Blocking: | ||
| Notify when closed: | Platform: | all | |
| Project: | ChimeraX |
Description
The following bug report has been submitted:
Platform: Darwin-18.7.0-x86_64-i386-64bit
ChimeraX Version: 1.1.1 (2020-10-07 08:32:49 UTC)
Description
Last time you used ChimeraX it crashed.
Please describe steps that led to the crash here.
Process: ChimeraX [3723]
Path: /Applications/ChimeraX-1.1.1.app/Contents/MacOS/ChimeraX
Identifier: edu.ucsf.cgl.ChimeraX
Version: 1.1.1 (1.1.1.0)
Code Type: X86-64 (Native)
Parent Process: ??? [1]
Responsible: ChimeraX [3723]
User ID: 501
Date/Time: 2020-11-30 15:53:10.326 +0800
OS Version: Mac OS X 10.14.6 (18G4032)
Report Version: 12
Anonymous UUID: 61971324-1730-DDE0-EB06-AA97B1BADFE4
Sleep/Wake UUID: F2E9EAE0-EEF6-4EE5-AF7D-CF7353CD5D71
Time Awake Since Boot: 26000 seconds
Time Since Wake: 1600 seconds
System Integrity Protection: enabled
Crashed Thread: 0 CrBrowserMain Dispatch queue: com.apple.main-thread
Exception Type: EXC_CRASH (SIGABRT)
Exception Codes: 0x0000000000000000, 0x0000000000000000
Exception Note: EXC_CORPSE_NOTIFY
Application Specific Information:
abort() called
Application Specific Signatures:
Graphics hardware encountered an error and was reset: 0x00000813
Thread 0 Crashed:: CrBrowserMain Dispatch queue: com.apple.main-thread
0 libsystem_kernel.dylib 0x00007fff7c8f62c2 __pthread_kill + 10
1 libsystem_pthread.dylib 0x00007fff7c9b1bf1 pthread_kill + 284
2 libsystem_c.dylib 0x00007fff7c813d8a raise + 26
3 libsystem_platform.dylib 0x00007fff7c9a6b5d _sigtramp + 29
4 ??? 000000000000000000 0 + 0
5 libsystem_c.dylib 0x00007fff7c8606a6 abort + 127
6 libGPUSupportMercury.dylib 0x00007fff6b8c9240 gpusGenerateCrashLog + 166
7 com.apple.driver.AppleIntelBDWGraphicsGLDriver 0x00007fff481e6a25 gpusKillClientExt + 9
8 libGPUSupportMercury.dylib 0x00007fff6b8ca730 gpusSubmitDataBuffers + 490
9 com.apple.driver.AppleIntelBDWGraphicsGLDriver 0x00007fff47dba6da IntelCommandBuffer::getNew(GLDContextRec*) + 48
10 com.apple.driver.AppleIntelBDWGraphicsGLDriver 0x00007fff47dba53a intelSubmitCommands + 171
11 com.apple.driver.AppleIntelBDWGraphicsGLDriver 0x00007fff47e4125a gldPresentFramebufferData + 120
12 GLEngine 0x00007fff5a4da611 glSwap_Exec + 97
13 com.apple.opengl 0x00007fff5a4bc74f CGLFlushDrawable + 59
14 com.apple.AppKit 0x00007fff4e208968 -[NSOpenGLContext flushBuffer] + 27
15 libqcocoa.dylib 0x000000011f13cd3d 0x11f0e6000 + 355645
16 QtGui 0x0000000114d97a6c QOpenGLContext::swapBuffers(QSurface*) + 412
17 QtGui.so 0x0000000115cc259f meth_QOpenGLContext_swapBuffers(_object*, _object*) + 95
18 org.python.python 0x000000010b3b8382 _PyMethodDef_RawFastCallKeywords + 226
19 org.python.python 0x000000010b3b78b9 _PyCFunction_FastCallKeywords + 41
20 org.python.python 0x000000010b48cb60 call_function + 656
21 org.python.python 0x000000010b489817 _PyEval_EvalFrameDefault + 26567
22 org.python.python 0x000000010b48da2c _PyEval_EvalCodeWithName + 3276
23 org.python.python 0x000000010b3b7879 _PyFunction_FastCallKeywords + 217
24 org.python.python 0x000000010b48cbd4 call_function + 772
25 org.python.python 0x000000010b4897fa _PyEval_EvalFrameDefault + 26538
26 org.python.python 0x000000010b3b7d61 function_code_fastcall + 177
27 org.python.python 0x000000010b48cbd4 call_function + 772
28 org.python.python 0x000000010b4897fa _PyEval_EvalFrameDefault + 26538
29 org.python.python 0x000000010b48da2c _PyEval_EvalCodeWithName + 3276
30 org.python.python 0x000000010b3b7879 _PyFunction_FastCallKeywords + 217
31 org.python.python 0x000000010b48cbd4 call_function + 772
32 org.python.python 0x000000010b4835c4 _PyEval_EvalFrameDefault + 1396
33 org.python.python 0x000000010b3b7d61 function_code_fastcall + 177
34 org.python.python 0x000000010b48cbd4 call_function + 772
35 org.python.python 0x000000010b4897fa _PyEval_EvalFrameDefault + 26538
36 org.python.python 0x000000010b3b7d61 function_code_fastcall + 177
37 org.python.python 0x000000010b3b8873 _PyObject_Call_Prepend + 131
38 org.python.python 0x000000010b3b79d8 PyObject_Call + 136
39 QtCore.so 0x00000001159c5f17 PyQtSlot::call(_object*, _object*) const + 39
40 QtCore.so 0x00000001159c5e26 PyQtSlot::invoke(void**, _object*, void*, bool) const + 374
41 QtCore.so 0x00000001159c6925 PyQtSlotProxy::unislot(void**) + 85
42 QtCore.so 0x00000001159c689a PyQtSlotProxy::qt_metacall(QMetaObject::Call, int, void**) + 58
43 QtCore 0x000000011549813d QMetaObject::activate(QObject*, int, int, void**) + 1773
44 QtCore 0x00000001154a01f2 QTimer::timerEvent(QTimerEvent*) + 98
45 QtCore.so 0x00000001158bc028 sipQTimer::timerEvent(QTimerEvent*) + 120
46 QtCore 0x0000000115490ab6 QObject::event(QEvent*) + 102
47 QtCore.so 0x00000001158bbe9b sipQTimer::event(QEvent*) + 187
48 QtWidgets 0x000000011477b67d QApplicationPrivate::notify_helper(QObject*, QEvent*) + 269
49 QtWidgets 0x000000011477ca82 QApplication::notify(QObject*, QEvent*) + 594
50 QtWidgets.so 0x000000011433b3ca sipQApplication::notify(QObject*, QEvent*) + 234
51 QtCore 0x0000000115467324 QCoreApplication::notifyInternal2(QObject*, QEvent*) + 212
52 QtCore 0x00000001154c093f QTimerInfoList::activateTimers() + 991
53 libqcocoa.dylib 0x000000011f11b032 0x11f0e6000 + 217138
54 com.apple.CoreFoundation 0x00007fff50873e33 __CFRUNLOOP_IS_CALLING_OUT_TO_A_SOURCE0_PERFORM_FUNCTION__ + 17
55 com.apple.CoreFoundation 0x00007fff50873dd9 __CFRunLoopDoSource0 + 108
56 com.apple.CoreFoundation 0x00007fff5085779b __CFRunLoopDoSources0 + 195
57 com.apple.CoreFoundation 0x00007fff50856d65 __CFRunLoopRun + 1189
58 com.apple.CoreFoundation 0x00007fff5085666e CFRunLoopRunSpecific + 455
59 com.apple.HIToolbox 0x00007fff4fab51ab RunCurrentEventLoopInMode + 292
60 com.apple.HIToolbox 0x00007fff4fab4ee5 ReceiveNextEventCommon + 603
61 com.apple.HIToolbox 0x00007fff4fab4c76 _BlockUntilNextEventMatchingListInModeWithFilter + 64
62 com.apple.AppKit 0x00007fff4de4c77d _DPSNextEvent + 1135
63 com.apple.AppKit 0x00007fff4de4b46b -[NSApplication(NSEvent) _nextEventMatchingEventMask:untilDate:inMode:dequeue:] + 1361
64 com.apple.AppKit 0x00007fff4de45588 -[NSApplication run] + 699
65 libqcocoa.dylib 0x000000011f11bde3 0x11f0e6000 + 220643
66 QtCore 0x000000011546293f QEventLoop::exec(QFlags) + 431
67 QtCore 0x0000000115467932 QCoreApplication::exec() + 130
68 QtWidgets.so 0x000000011442a7d2 meth_QApplication_exec_(_object*, _object*) + 82
69 org.python.python 0x000000010b3b8382 _PyMethodDef_RawFastCallKeywords + 226
70 org.python.python 0x000000010b3b78b9 _PyCFunction_FastCallKeywords + 41
71 org.python.python 0x000000010b48cb60 call_function + 656
72 org.python.python 0x000000010b489817 _PyEval_EvalFrameDefault + 26567
73 org.python.python 0x000000010b3b7d61 function_code_fastcall + 177
74 org.python.python 0x000000010b48cbd4 call_function + 772
75 org.python.python 0x000000010b489817 _PyEval_EvalFrameDefault + 26567
76 org.python.python 0x000000010b48da2c _PyEval_EvalCodeWithName + 3276
77 org.python.python 0x000000010b3b7879 _PyFunction_FastCallKeywords + 217
78 org.python.python 0x000000010b48cbd4 call_function + 772
79 org.python.python 0x000000010b4898ae _PyEval_EvalFrameDefault + 26718
80 org.python.python 0x000000010b48da2c _PyEval_EvalCodeWithName + 3276
81 org.python.python 0x000000010b482fb0 PyEval_EvalCode + 48
82 org.python.python 0x000000010b480547 builtin_exec + 583
83 org.python.python 0x000000010b3b852d _PyMethodDef_RawFastCallKeywords + 653
84 org.python.python 0x000000010b3b78b9 _PyCFunction_FastCallKeywords + 41
85 org.python.python 0x000000010b48cb60 call_function + 656
86 org.python.python 0x000000010b4898ae _PyEval_EvalFrameDefault + 26718
87 org.python.python 0x000000010b48da2c _PyEval_EvalCodeWithName + 3276
88 org.python.python 0x000000010b3b7879 _PyFunction_FastCallKeywords + 217
89 org.python.python 0x000000010b48cbd4 call_function + 772
90 org.python.python 0x000000010b4898ae _PyEval_EvalFrameDefault + 26718
91 org.python.python 0x000000010b48da2c _PyEval_EvalCodeWithName + 3276
92 org.python.python 0x000000010b3b7377 _PyFunction_FastCallDict + 455
93 org.python.python 0x000000010b4e7af3 pymain_run_module + 147
94 org.python.python 0x000000010b4e6bdc pymain_main + 5900
95 org.python.python 0x000000010b4e54c3 Py_Main + 51
96 edu.ucsf.cgl.ChimeraX 0x000000010b38bdc8 main + 120
97 libdyld.dylib 0x00007fff7c7bb3d5 start + 1
Thread 1:: com.apple.NSEventThread
0 libsystem_kernel.dylib 0x00007fff7c8f021a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff7c8f0768 mach_msg + 60
2 com.apple.CoreFoundation 0x00007fff5085799e __CFRunLoopServiceMachPort + 328
3 com.apple.CoreFoundation 0x00007fff50856f0c __CFRunLoopRun + 1612
4 com.apple.CoreFoundation 0x00007fff5085666e CFRunLoopRunSpecific + 455
5 com.apple.AppKit 0x00007fff4de544a2 _NSEventThread + 175
6 libsystem_pthread.dylib 0x00007fff7c9af2eb _pthread_body + 126
7 libsystem_pthread.dylib 0x00007fff7c9b2249 _pthread_start + 66
8 libsystem_pthread.dylib 0x00007fff7c9ae40d thread_start + 13
Thread 2:: NetworkConfigWatcher
0 libsystem_kernel.dylib 0x00007fff7c8f021a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff7c8f0768 mach_msg + 60
2 QtWebEngineCore 0x000000011829c32d 0x1160fa000 + 35267373
3 QtWebEngineCore 0x000000011829c22f 0x1160fa000 + 35267119
4 QtWebEngineCore 0x000000011825005d 0x1160fa000 + 34955357
5 QtWebEngineCore 0x0000000118279085 0x1160fa000 + 35123333
6 QtWebEngineCore 0x00000001182cb9bc 0x1160fa000 + 35461564
7 QtWebEngineCore 0x000000011830b717 0x1160fa000 + 35723031
8 libsystem_pthread.dylib 0x00007fff7c9af2eb _pthread_body + 126
9 libsystem_pthread.dylib 0x00007fff7c9b2249 _pthread_start + 66
10 libsystem_pthread.dylib 0x00007fff7c9ae40d thread_start + 13
Thread 3:: DnsConfigService
0 libsystem_kernel.dylib 0x00007fff7c8f678a kevent + 10
1 QtWebEngineCore 0x000000011855d9a9 0x1160fa000 + 38156713
2 QtWebEngineCore 0x000000011855acbd 0x1160fa000 + 38145213
3 QtWebEngineCore 0x0000000118311cdc 0x1160fa000 + 35749084
4 QtWebEngineCore 0x0000000118279085 0x1160fa000 + 35123333
5 QtWebEngineCore 0x00000001182cb9bc 0x1160fa000 + 35461564
6 QtWebEngineCore 0x000000011830b717 0x1160fa000 + 35723031
7 libsystem_pthread.dylib 0x00007fff7c9af2eb _pthread_body + 126
8 libsystem_pthread.dylib 0x00007fff7c9b2249 _pthread_start + 66
9 libsystem_pthread.dylib 0x00007fff7c9ae40d thread_start + 13
Thread 4:: TaskSchedulerServiceThread
0 libsystem_kernel.dylib 0x00007fff7c8f678a kevent + 10
1 QtWebEngineCore 0x000000011855d9a9 0x1160fa000 + 38156713
2 QtWebEngineCore 0x000000011855acbd 0x1160fa000 + 38145213
3 QtWebEngineCore 0x0000000118311cc4 0x1160fa000 + 35749060
4 QtWebEngineCore 0x0000000118279085 0x1160fa000 + 35123333
5 QtWebEngineCore 0x00000001182baa74 0x1160fa000 + 35392116
6 QtWebEngineCore 0x00000001182cb9bc 0x1160fa000 + 35461564
7 QtWebEngineCore 0x000000011830b717 0x1160fa000 + 35723031
8 libsystem_pthread.dylib 0x00007fff7c9af2eb _pthread_body + 126
9 libsystem_pthread.dylib 0x00007fff7c9b2249 _pthread_start + 66
10 libsystem_pthread.dylib 0x00007fff7c9ae40d thread_start + 13
Thread 5:: TaskSchedulerForegroundWorker
0 libsystem_kernel.dylib 0x00007fff7c8f021a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff7c8f0768 mach_msg + 60
2 QtWebEngineCore 0x000000011829c32d 0x1160fa000 + 35267373
3 QtWebEngineCore 0x000000011829c421 0x1160fa000 + 35267617
4 QtWebEngineCore 0x00000001182b3d28 0x1160fa000 + 35364136
5 QtWebEngineCore 0x00000001182b465b 0x1160fa000 + 35366491
6 QtWebEngineCore 0x00000001182b42c4 0x1160fa000 + 35365572
7 QtWebEngineCore 0x000000011830b717 0x1160fa000 + 35723031
8 libsystem_pthread.dylib 0x00007fff7c9af2eb _pthread_body + 126
9 libsystem_pthread.dylib 0x00007fff7c9b2249 _pthread_start + 66
10 libsystem_pthread.dylib 0x00007fff7c9ae40d thread_start + 13
Thread 6:: TaskSchedulerBackgroundWorker
0 libsystem_kernel.dylib 0x00007fff7c8f021a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff7c8f0768 mach_msg + 60
2 QtWebEngineCore 0x000000011829c32d 0x1160fa000 + 35267373
3 QtWebEngineCore 0x000000011829c421 0x1160fa000 + 35267617
4 QtWebEngineCore 0x00000001182b3d28 0x1160fa000 + 35364136
5 QtWebEngineCore 0x00000001182b465b 0x1160fa000 + 35366491
6 QtWebEngineCore 0x00000001182b4234 0x1160fa000 + 35365428
7 QtWebEngineCore 0x000000011830b717 0x1160fa000 + 35723031
8 libsystem_pthread.dylib 0x00007fff7c9af2eb _pthread_body + 126
9 libsystem_pthread.dylib 0x00007fff7c9b2249 _pthread_start + 66
10 libsystem_pthread.dylib 0x00007fff7c9ae40d thread_start + 13
Thread 7:: Chrome_IOThread
0 libsystem_kernel.dylib 0x00007fff7c8f678a kevent + 10
1 QtWebEngineCore 0x000000011855d9a9 0x1160fa000 + 38156713
2 QtWebEngineCore 0x000000011855acbd 0x1160fa000 + 38145213
3 QtWebEngineCore 0x0000000118311cc4 0x1160fa000 + 35749060
4 QtWebEngineCore 0x0000000118279085 0x1160fa000 + 35123333
5 QtWebEngineCore 0x0000000117be7fe4 0x1160fa000 + 28237796
6 QtWebEngineCore 0x00000001182cb9bc 0x1160fa000 + 35461564
7 QtWebEngineCore 0x000000011830b717 0x1160fa000 + 35723031
8 libsystem_pthread.dylib 0x00007fff7c9af2eb _pthread_body + 126
9 libsystem_pthread.dylib 0x00007fff7c9b2249 _pthread_start + 66
10 libsystem_pthread.dylib 0x00007fff7c9ae40d thread_start + 13
Thread 8:: TaskSchedulerSingleThreadSharedBackgroundBlocking0
0 libsystem_kernel.dylib 0x00007fff7c8f021a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff7c8f0768 mach_msg + 60
2 QtWebEngineCore 0x000000011829c32d 0x1160fa000 + 35267373
3 QtWebEngineCore 0x000000011829c22f 0x1160fa000 + 35267119
4 QtWebEngineCore 0x00000001182b3d1a 0x1160fa000 + 35364122
5 QtWebEngineCore 0x00000001182b43bf 0x1160fa000 + 35365823
6 QtWebEngineCore 0x00000001182b4264 0x1160fa000 + 35365476
7 QtWebEngineCore 0x000000011830b717 0x1160fa000 + 35723031
8 libsystem_pthread.dylib 0x00007fff7c9af2eb _pthread_body + 126
9 libsystem_pthread.dylib 0x00007fff7c9b2249 _pthread_start + 66
10 libsystem_pthread.dylib 0x00007fff7c9ae40d thread_start + 13
Thread 9:: CompositorTileWorker1/55555
0 libsystem_kernel.dylib 0x00007fff7c8f3866 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff7c9b256e _pthread_cond_wait + 722
2 QtWebEngineCore 0x0000000118309fa8 0x1160fa000 + 35717032
3 QtWebEngineCore 0x00000001192904c8 0x1160fa000 + 51995848
4 QtWebEngineCore 0x00000001182ca694 0x1160fa000 + 35456660
5 QtWebEngineCore 0x000000011830b717 0x1160fa000 + 35723031
6 libsystem_pthread.dylib 0x00007fff7c9af2eb _pthread_body + 126
7 libsystem_pthread.dylib 0x00007fff7c9b2249 _pthread_start + 66
8 libsystem_pthread.dylib 0x00007fff7c9ae40d thread_start + 13
Thread 10:: AudioThread
0 libsystem_kernel.dylib 0x00007fff7c8f021a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff7c8f0768 mach_msg + 60
2 QtWebEngineCore 0x000000011829c32d 0x1160fa000 + 35267373
3 QtWebEngineCore 0x000000011829c22f 0x1160fa000 + 35267119
4 QtWebEngineCore 0x000000011825005d 0x1160fa000 + 34955357
5 QtWebEngineCore 0x0000000118279085 0x1160fa000 + 35123333
6 QtWebEngineCore 0x00000001182cb9bc 0x1160fa000 + 35461564
7 QtWebEngineCore 0x000000011830b717 0x1160fa000 + 35723031
8 libsystem_pthread.dylib 0x00007fff7c9af2eb _pthread_body + 126
9 libsystem_pthread.dylib 0x00007fff7c9b2249 _pthread_start + 66
10 libsystem_pthread.dylib 0x00007fff7c9ae40d thread_start + 13
Thread 11:: NetworkConfigWatcher
0 libsystem_kernel.dylib 0x00007fff7c8f021a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff7c8f0768 mach_msg + 60
2 QtWebEngineCore 0x000000011829c32d 0x1160fa000 + 35267373
3 QtWebEngineCore 0x000000011829c22f 0x1160fa000 + 35267119
4 QtWebEngineCore 0x000000011825005d 0x1160fa000 + 34955357
5 QtWebEngineCore 0x0000000118279085 0x1160fa000 + 35123333
6 QtWebEngineCore 0x00000001182cb9bc 0x1160fa000 + 35461564
7 QtWebEngineCore 0x000000011830b717 0x1160fa000 + 35723031
8 libsystem_pthread.dylib 0x00007fff7c9af2eb _pthread_body + 126
9 libsystem_pthread.dylib 0x00007fff7c9b2249 _pthread_start + 66
10 libsystem_pthread.dylib 0x00007fff7c9ae40d thread_start + 13
Thread 12:: Chrome_InProcGpuThread
0 libsystem_kernel.dylib 0x00007fff7c8f021a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff7c8f0768 mach_msg + 60
2 QtWebEngineCore 0x000000011829c32d 0x1160fa000 + 35267373
3 QtWebEngineCore 0x0000000118250052 0x1160fa000 + 34955346
4 QtWebEngineCore 0x0000000118279085 0x1160fa000 + 35123333
5 QtWebEngineCore 0x00000001182cb9bc 0x1160fa000 + 35461564
6 QtWebEngineCore 0x000000011830b717 0x1160fa000 + 35723031
7 libsystem_pthread.dylib 0x00007fff7c9af2eb _pthread_body + 126
8 libsystem_pthread.dylib 0x00007fff7c9b2249 _pthread_start + 66
9 libsystem_pthread.dylib 0x00007fff7c9ae40d thread_start + 13
Thread 13:: Chrome_ChildIOThread
0 libsystem_kernel.dylib 0x00007fff7c8f678a kevent + 10
1 QtWebEngineCore 0x000000011855d9a9 0x1160fa000 + 38156713
2 QtWebEngineCore 0x000000011855acbd 0x1160fa000 + 38145213
3 QtWebEngineCore 0x0000000118311cdc 0x1160fa000 + 35749084
4 QtWebEngineCore 0x0000000118279085 0x1160fa000 + 35123333
5 QtWebEngineCore 0x00000001182cb9bc 0x1160fa000 + 35461564
6 QtWebEngineCore 0x000000011830b717 0x1160fa000 + 35723031
7 libsystem_pthread.dylib 0x00007fff7c9af2eb _pthread_body + 126
8 libsystem_pthread.dylib 0x00007fff7c9b2249 _pthread_start + 66
9 libsystem_pthread.dylib 0x00007fff7c9ae40d thread_start + 13
Thread 14:: TaskSchedulerSingleThreadForegroundBlocking1
0 libsystem_kernel.dylib 0x00007fff7c8f021a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff7c8f0768 mach_msg + 60
2 QtWebEngineCore 0x000000011829c32d 0x1160fa000 + 35267373
3 QtWebEngineCore 0x000000011829c22f 0x1160fa000 + 35267119
4 QtWebEngineCore 0x00000001182b3d1a 0x1160fa000 + 35364122
5 QtWebEngineCore 0x00000001182b465b 0x1160fa000 + 35366491
6 QtWebEngineCore 0x00000001182b4324 0x1160fa000 + 35365668
7 QtWebEngineCore 0x000000011830b717 0x1160fa000 + 35723031
8 libsystem_pthread.dylib 0x00007fff7c9af2eb _pthread_body + 126
9 libsystem_pthread.dylib 0x00007fff7c9b2249 _pthread_start + 66
10 libsystem_pthread.dylib 0x00007fff7c9ae40d thread_start + 13
Thread 15:: NetworkConfigWatcher
0 libsystem_kernel.dylib 0x00007fff7c8f021a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff7c8f0768 mach_msg + 60
2 QtWebEngineCore 0x000000011829c32d 0x1160fa000 + 35267373
3 QtWebEngineCore 0x000000011829c22f 0x1160fa000 + 35267119
4 QtWebEngineCore 0x000000011825005d 0x1160fa000 + 34955357
5 QtWebEngineCore 0x0000000118279085 0x1160fa000 + 35123333
6 QtWebEngineCore 0x00000001182cb9bc 0x1160fa000 + 35461564
7 QtWebEngineCore 0x000000011830b717 0x1160fa000 + 35723031
8 libsystem_pthread.dylib 0x00007fff7c9af2eb _pthread_body + 126
9 libsystem_pthread.dylib 0x00007fff7c9b2249 _pthread_start + 66
10 libsystem_pthread.dylib 0x00007fff7c9ae40d thread_start + 13
Thread 16:
0 libsystem_kernel.dylib 0x00007fff7c8f0322 swtch_pri + 10
1 libsystem_pthread.dylib 0x00007fff7c9b1e90 sched_yield + 11
2 libopenblasp-r0.3.7.dylib 0x000000010cec9c05 blas_thread_server + 565
3 libsystem_pthread.dylib 0x00007fff7c9af2eb _pthread_body + 126
4 libsystem_pthread.dylib 0x00007fff7c9b2249 _pthread_start + 66
5 libsystem_pthread.dylib 0x00007fff7c9ae40d thread_start + 13
Thread 17:: TaskSchedulerBackgroundBlockingWorker
0 libsystem_kernel.dylib 0x00007fff7c8f021a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff7c8f0768 mach_msg + 60
2 QtWebEngineCore 0x000000011829c32d 0x1160fa000 + 35267373
3 QtWebEngineCore 0x000000011829c421 0x1160fa000 + 35267617
4 QtWebEngineCore 0x00000001182b3d28 0x1160fa000 + 35364136
5 QtWebEngineCore 0x00000001182b465b 0x1160fa000 + 35366491
6 QtWebEngineCore 0x00000001182b4234 0x1160fa000 + 35365428
7 QtWebEngineCore 0x000000011830b717 0x1160fa000 + 35723031
8 libsystem_pthread.dylib 0x00007fff7c9af2eb _pthread_body + 126
9 libsystem_pthread.dylib 0x00007fff7c9b2249 _pthread_start + 66
10 libsystem_pthread.dylib 0x00007fff7c9ae40d thread_start + 13
Thread 18:: TaskSchedulerForegroundBlockingWorker
0 libsystem_kernel.dylib 0x00007fff7c8f021a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff7c8f0768 mach_msg + 60
2 QtWebEngineCore 0x000000011829c32d 0x1160fa000 + 35267373
3 QtWebEngineCore 0x000000011829c421 0x1160fa000 + 35267617
4 QtWebEngineCore 0x00000001182b3d28 0x1160fa000 + 35364136
5 QtWebEngineCore 0x00000001182b465b 0x1160fa000 + 35366491
6 QtWebEngineCore 0x00000001182b42c4 0x1160fa000 + 35365572
7 QtWebEngineCore 0x000000011830b717 0x1160fa000 + 35723031
8 libsystem_pthread.dylib 0x00007fff7c9af2eb _pthread_body + 126
9 libsystem_pthread.dylib 0x00007fff7c9b2249 _pthread_start + 66
10 libsystem_pthread.dylib 0x00007fff7c9ae40d thread_start + 13
Thread 19:: TaskSchedulerForegroundWorker
0 libsystem_kernel.dylib 0x00007fff7c8f021a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff7c8f0768 mach_msg + 60
2 QtWebEngineCore 0x000000011829c32d 0x1160fa000 + 35267373
3 QtWebEngineCore 0x000000011829c421 0x1160fa000 + 35267617
4 QtWebEngineCore 0x00000001182b3d28 0x1160fa000 + 35364136
5 QtWebEngineCore 0x00000001182b465b 0x1160fa000 + 35366491
6 QtWebEngineCore 0x00000001182b42c4 0x1160fa000 + 35365572
7 QtWebEngineCore 0x000000011830b717 0x1160fa000 + 35723031
8 libsystem_pthread.dylib 0x00007fff7c9af2eb _pthread_body + 126
9 libsystem_pthread.dylib 0x00007fff7c9b2249 _pthread_start + 66
10 libsystem_pthread.dylib 0x00007fff7c9ae40d thread_start + 13
Thread 20:: QFileInfoGatherer
0 libsystem_kernel.dylib 0x00007fff7c8f3866 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff7c9b256e _pthread_cond_wait + 722
2 QtCore 0x00000001152a78ab 0x11527d000 + 174251
3 QtCore 0x00000001152a780c QWaitCondition::wait(QMutex*, QDeadlineTimer) + 108
4 QtWidgets 0x00000001149a6762 0x11476b000 + 2340706
5 QtCore 0x000000011529f0b3 0x11527d000 + 139443
6 libsystem_pthread.dylib 0x00007fff7c9af2eb _pthread_body + 126
7 libsystem_pthread.dylib 0x00007fff7c9b2249 _pthread_start + 66
8 libsystem_pthread.dylib 0x00007fff7c9ae40d thread_start + 13
Thread 21:
0 libsystem_pthread.dylib 0x00007fff7c9ae3f0 start_wqthread + 0
Thread 22:
0 libsystem_pthread.dylib 0x00007fff7c9ae3f0 start_wqthread + 0
Thread 23:
0 libsystem_pthread.dylib 0x00007fff7c9ae3f0 start_wqthread + 0
Thread 0 crashed with X86 Thread State (64-bit):
rax: 0x0000000000000000 rbx: 0x00000001117105c0 rcx: 0x000000010b83ca48 rdx: 0x0000000000000000
rdi: 0x0000000000000307 rsi: 0x0000000000000006 rbp: 0x000000010b83ca80 rsp: 0x000000010b83ca48
r8: 0x000000010b83cf48 r9: 0x6fb11417b31b6f60 r10: 0x000000011171066c r11: 0x0000000000000206
r12: 0x0000000000000307 r13: 0x0000000120d813f8 r14: 0x0000000000000006 r15: 0x000000000000002d
rip: 0x00007fff7c8f62c2 rfl: 0x0000000000000206 cr2: 0x000000010b5f2f7c
Logical CPU: 0
Error Code: 0x02000148
Trap Number: 133
Binary Images:
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0x7fff7b8c4000 - 0x7fff7b8dcffb libresolv.9.dylib (65.200.3) /usr/lib/libresolv.9.dylib
0x7fff7b8de000 - 0x7fff7b919ff3 libsandbox.1.dylib (851.270.1) /usr/lib/libsandbox.1.dylib
0x7fff7b91a000 - 0x7fff7b92cff7 libsasl2.2.dylib (211) /usr/lib/libsasl2.2.dylib
0x7fff7b92d000 - 0x7fff7b92eff7 libspindump.dylib (267.3) /usr/lib/libspindump.dylib
0x7fff7b92f000 - 0x7fff7bb0cfff libsqlite3.dylib (274.26) /usr/lib/libsqlite3.dylib
0x7fff7bc7b000 - 0x7fff7bcabffb libtidy.A.dylib (16.4) /usr/lib/libtidy.A.dylib
0x7fff7bd25000 - 0x7fff7bd28ff7 libutil.dylib (51.200.4) /usr/lib/libutil.dylib
0x7fff7bd29000 - 0x7fff7bd36fff libxar.1.dylib (417.1) /usr/lib/libxar.1.dylib
0x7fff7bd3b000 - 0x7fff7be1eff3 libxml2.2.dylib (32.15) /usr/lib/libxml2.2.dylib
0x7fff7be1f000 - 0x7fff7be47ff3 libxslt.1.dylib (16.7) /usr/lib/libxslt.1.dylib
0x7fff7be48000 - 0x7fff7be5aff7 libz.1.dylib (70.200.4) /usr/lib/libz.1.dylib
0x7fff7c63e000 - 0x7fff7c642ff3 libcache.dylib (81) /usr/lib/system/libcache.dylib
0x7fff7c643000 - 0x7fff7c64dff3 libcommonCrypto.dylib (60118.250.2) /usr/lib/system/libcommonCrypto.dylib
0x7fff7c64e000 - 0x7fff7c655ff7 libcompiler_rt.dylib (63.4) /usr/lib/system/libcompiler_rt.dylib
0x7fff7c656000 - 0x7fff7c65fff7 libcopyfile.dylib (146.250.1) /usr/lib/system/libcopyfile.dylib
0x7fff7c660000 - 0x7fff7c6e4fc3 libcorecrypto.dylib (602.260.2) /usr/lib/system/libcorecrypto.dylib
0x7fff7c76b000 - 0x7fff7c7a4ff7 libdispatch.dylib (1008.270.1) /usr/lib/system/libdispatch.dylib
0x7fff7c7a5000 - 0x7fff7c7d1ff7 libdyld.dylib (655.1.1) /usr/lib/system/libdyld.dylib
0x7fff7c7d2000 - 0x7fff7c7d2ffb libkeymgr.dylib (30) /usr/lib/system/libkeymgr.dylib
0x7fff7c7d3000 - 0x7fff7c7dfff3 libkxld.dylib (4903.278.28) /usr/lib/system/libkxld.dylib
0x7fff7c7e0000 - 0x7fff7c7e0ff7 liblaunch.dylib (1336.261.4) /usr/lib/system/liblaunch.dylib
0x7fff7c7e1000 - 0x7fff7c7e6fff libmacho.dylib (927.0.3) /usr/lib/system/libmacho.dylib
0x7fff7c7e7000 - 0x7fff7c7e9ff7 libquarantine.dylib (86.270.1) /usr/lib/system/libquarantine.dylib
0x7fff7c7ea000 - 0x7fff7c7ebff7 libremovefile.dylib (45.200.2) /usr/lib/system/libremovefile.dylib
0x7fff7c7ec000 - 0x7fff7c803ff3 libsystem_asl.dylib (356.200.4) /usr/lib/system/libsystem_asl.dylib
0x7fff7c804000 - 0x7fff7c804ff7 libsystem_blocks.dylib (73) /usr/lib/system/libsystem_blocks.dylib
0x7fff7c805000 - 0x7fff7c88cfff libsystem_c.dylib (1272.250.1) /usr/lib/system/libsystem_c.dylib
0x7fff7c88d000 - 0x7fff7c890ffb libsystem_configuration.dylib (963.270.3) /usr/lib/system/libsystem_configuration.dylib
0x7fff7c891000 - 0x7fff7c894ff7 libsystem_coreservices.dylib (66) /usr/lib/system/libsystem_coreservices.dylib
0x7fff7c895000 - 0x7fff7c89bfff libsystem_darwin.dylib (1272.250.1) /usr/lib/system/libsystem_darwin.dylib
0x7fff7c89c000 - 0x7fff7c8a2ffb libsystem_dnssd.dylib (878.270.3) /usr/lib/system/libsystem_dnssd.dylib
0x7fff7c8a3000 - 0x7fff7c8eeffb libsystem_info.dylib (517.200.9) /usr/lib/system/libsystem_info.dylib
0x7fff7c8ef000 - 0x7fff7c917ff7 libsystem_kernel.dylib (4903.278.28) /usr/lib/system/libsystem_kernel.dylib
0x7fff7c918000 - 0x7fff7c963ff7 libsystem_m.dylib (3158.200.7) /usr/lib/system/libsystem_m.dylib
0x7fff7c964000 - 0x7fff7c98efff libsystem_malloc.dylib (166.270.1) /usr/lib/system/libsystem_malloc.dylib
0x7fff7c98f000 - 0x7fff7c999ff7 libsystem_networkextension.dylib (767.250.2) /usr/lib/system/libsystem_networkextension.dylib
0x7fff7c99a000 - 0x7fff7c9a1fff libsystem_notify.dylib (172.200.21) /usr/lib/system/libsystem_notify.dylib
0x7fff7c9a2000 - 0x7fff7c9abfef libsystem_platform.dylib (177.270.1) /usr/lib/system/libsystem_platform.dylib
0x7fff7c9ac000 - 0x7fff7c9b6ff7 libsystem_pthread.dylib (330.250.2) /usr/lib/system/libsystem_pthread.dylib
0x7fff7c9b7000 - 0x7fff7c9baff7 libsystem_sandbox.dylib (851.270.1) /usr/lib/system/libsystem_sandbox.dylib
0x7fff7c9bb000 - 0x7fff7c9bdff3 libsystem_secinit.dylib (30.260.2) /usr/lib/system/libsystem_secinit.dylib
0x7fff7c9be000 - 0x7fff7c9c5ff3 libsystem_symptoms.dylib (820.267.1) /usr/lib/system/libsystem_symptoms.dylib
0x7fff7c9c6000 - 0x7fff7c9dbff7 libsystem_trace.dylib (906.260.2) /usr/lib/system/libsystem_trace.dylib
0x7fff7c9dd000 - 0x7fff7c9e2ffb libunwind.dylib (35.4) /usr/lib/system/libunwind.dylib
0x7fff7c9e3000 - 0x7fff7ca12fff libxpc.dylib (1336.261.4) /usr/lib/system/libxpc.dylib
External Modification Summary:
Calls made by other processes targeting this process:
task_for_pid: 5
thread_create: 0
thread_set_state: 0
Calls made by this process:
task_for_pid: 0
thread_create: 0
thread_set_state: 0
Calls made by all processes on this machine:
task_for_pid: 31000
thread_create: 0
thread_set_state: 0
VM Region Summary:
ReadOnly portion of Libraries: Total=732.0M resident=0K(0%) swapped_out_or_unallocated=732.0M(100%)
Writable regions: Total=1.1G written=0K(0%) resident=0K(0%) swapped_out=0K(0%) unallocated=1.1G(100%)
VIRTUAL REGION
REGION TYPE SIZE COUNT (non-coalesced)
=========== ======= =======
Accelerate framework 384K 3
Activity Tracing 256K 1
CG backing stores 988K 3
CG image 280K 24
CoreAnimation 900K 16
CoreGraphics 8K 1
CoreImage 36K 5
CoreUI image data 3512K 34
CoreUI image file 320K 4
Foundation 40K 2
Image IO 32K 4
Kernel Alloc Once 1452K 6
MALLOC 413.4M 307
MALLOC guard page 32K 8
MALLOC_LARGE (reserved) 384K 1 reserved VM address space (unallocated)
MALLOC_NANO (reserved) 384.0M 1 reserved VM address space (unallocated)
Memory Tag 242 12K 1
OpenGL GLSL 512K 5
PROTECTED_MEMORY 4K 1
STACK GUARD 92K 23
Stack 147.2M 24
Stack Guard 56.0M 1
VM_ALLOCATE 188.9M 230
__DATA 50.2M 520
__FONT_DATA 4K 1
__GLSLBUILTINS 5176K 1
__LINKEDIT 246.8M 137
__TEXT 485.2M 494
__UNICODE 564K 1
mapped file 190.2M 60
shared memory 760K 19
=========== ======= =======
TOTAL 2.1G 1938
TOTAL, minus reserved VM space 1.8G 1938
System Profile:
Network Service: Wi-Fi, AirPort, en0
Thunderbolt Bus: MacBook Pro, Apple Inc., 27.1
Boot Volume File System Type: apfs
Memory Module: BANK 0/DIMM0, 4 GB, DDR3, 1867 MHz, 0x80CE, 0x4B3445364533303445452D45474346000000
Memory Module: BANK 1/DIMM0, 4 GB, DDR3, 1867 MHz, 0x80CE, 0x4B3445364533303445452D45474346000000
USB Device: USB 3.0 Bus
USB Device: Bluetooth USB Host Controller
Serial ATA Device: APPLE SSD SM0128G, 121.33 GB
Model: MacBookPro12,1, BootROM 190.0.0.0.0, 2 processors, Intel Core i5, 2.7 GHz, 8 GB, SMC 2.28f7
Graphics: kHW_IntelIris6100Item, Intel Iris Graphics 6100, spdisplays_builtin
AirPort: spairport_wireless_card_type_airport_extreme (0x14E4, 0x133), Broadcom BCM43xx 1.0 (7.77.61.3 AirPortDriverBrcmNIC-1305.9)
Bluetooth: Version 6.0.14d6, 3 services, 18 devices, 1 incoming serial ports
Log:
UCSF ChimeraX version: 1.1.1 (2020-10-07)
© 2016-2020 Regents of the University of California. All rights reserved.
How to cite UCSF ChimeraX
> open /Users/robinkd35/Downloads/588005.all_in_one/588005.pdb
Summary of feedback from opening
/Users/robinkd35/Downloads/588005.all_in_one/588005.pdb
---
warnings | Ignored bad PDB record found on line 965
MISS HIS 120 0.000 0.000 0.000 0.00 0.00
Ignored bad PDB record found on line 966
MISS LYS 121 0.000 0.000 0.000 0.00 0.00
Ignored bad PDB record found on line 967
MISS VAL 122 0.000 0.000 0.000 0.00 0.00
Ignored bad PDB record found on line 968
MISS LYS 123 0.000 0.000 0.000 0.00 0.00
Ignored bad PDB record found on line 969
MISS SER 124 0.000 0.000 0.000 0.00 0.00
34 messages similar to the above omitted
Chain information for 588005.pdb #1
---
Chain | Description
| No description available
Successfully installed ChimeraX-AddH-2.1.3 ChimeraX-HKCage-1.3
Installed ChimeraX-AddH (2.1.3)
Installed ChimeraX-HKCage (1.3)
OpenGL version: 4.1 INTEL-12.10.17
OpenGL renderer: Intel(R) Iris(TM) Graphics 6100
OpenGL vendor: Intel Inc.Hardware:
Hardware Overview:
Model Name: MacBook Pro
Model Identifier: MacBookPro12,1
Processor Name: Intel Core i5
Processor Speed: 2.7 GHz
Number of Processors: 1
Total Number of Cores: 2
L2 Cache (per Core): 256 KB
L3 Cache: 3 MB
Hyper-Threading Technology: Enabled
Memory: 8 GB
Boot ROM Version: 190.0.0.0.0
SMC Version (system): 2.28f7
Software:
System Software Overview:
System Version: macOS 10.14.6 (18G4032)
Kernel Version: Darwin 18.7.0
Time since boot: 10 days 23:55
Graphics/Displays:
Intel Iris Graphics 6100:
Chipset Model: Intel Iris Graphics 6100
Type: GPU
Bus: Built-In
VRAM (Dynamic, Max): 1536 MB
Vendor: Intel
Device ID: 0x162b
Revision ID: 0x0009
Metal: Supported, feature set macOS GPUFamily1 v4
Displays:
Color LCD:
Display Type: Built-In Retina LCD
Resolution: 2560 x 1600 Retina
Framebuffer Depth: 24-Bit Color (ARGB8888)
Main Display: Yes
Mirror: Off
Online: Yes
Rotation: Supported
Automatically Adjust Brightness: No
PyQt version: 5.12.3
Compiled Qt version: 5.12.4
Runtime Qt version: 5.12.9
Installed Packages:
alabaster: 0.7.12
appdirs: 1.4.4
appnope: 0.1.0
Babel: 2.8.0
backcall: 0.2.0
blockdiag: 2.0.1
certifi: 2020.6.20
chardet: 3.0.4
ChimeraX-AddH: 2.1.1
ChimeraX-AlignmentAlgorithms: 2.0
ChimeraX-AlignmentHdrs: 3.2
ChimeraX-AlignmentMatrices: 2.0
ChimeraX-Alignments: 2.1
ChimeraX-Arrays: 1.0
ChimeraX-Atomic: 1.6.1
ChimeraX-AtomSearch: 2.0
ChimeraX-AxesPlanes: 2.0
ChimeraX-BasicActions: 1.1
ChimeraX-BILD: 1.0
ChimeraX-BlastProtein: 1.0.1
ChimeraX-BondRot: 2.0
ChimeraX-BugReporter: 1.0
ChimeraX-BuildStructure: 2.0
ChimeraX-Bumps: 1.0
ChimeraX-BundleBuilder: 1.0
ChimeraX-ButtonPanel: 1.0
ChimeraX-CageBuilder: 1.0
ChimeraX-CellPack: 1.0
ChimeraX-Centroids: 1.1
ChimeraX-ChemGroup: 2.0
ChimeraX-Clashes: 2.0
ChimeraX-ColorActions: 1.0
ChimeraX-ColorGlobe: 1.0
ChimeraX-CommandLine: 1.1.3
ChimeraX-ConnectStructure: 2.0
ChimeraX-Contacts: 1.0
ChimeraX-Core: 1.1.1
ChimeraX-CoreFormats: 1.0
ChimeraX-coulombic: 1.0.1
ChimeraX-Crosslinks: 1.0
ChimeraX-Crystal: 1.0
ChimeraX-DataFormats: 1.0
ChimeraX-Dicom: 1.0
ChimeraX-DistMonitor: 1.1
ChimeraX-DistUI: 1.0
ChimeraX-Dssp: 2.0
ChimeraX-EMDB-SFF: 1.0
ChimeraX-ExperimentalCommands: 1.0
ChimeraX-FileHistory: 1.0
ChimeraX-FunctionKey: 1.0
ChimeraX-Geometry: 1.1
ChimeraX-gltf: 1.0
ChimeraX-Graphics: 1.0
ChimeraX-Hbonds: 2.0
ChimeraX-Help: 1.0
ChimeraX-HKCage: 1.0
ChimeraX-IHM: 1.0
ChimeraX-ImageFormats: 1.0
ChimeraX-IMOD: 1.0
ChimeraX-IO: 1.0
ChimeraX-Label: 1.0
ChimeraX-ListInfo: 1.0
ChimeraX-Log: 1.1.1
ChimeraX-LookingGlass: 1.1
ChimeraX-Map: 1.0.1
ChimeraX-MapData: 2.0
ChimeraX-MapEraser: 1.0
ChimeraX-MapFilter: 2.0
ChimeraX-MapFit: 2.0
ChimeraX-MapSeries: 2.0
ChimeraX-Markers: 1.0
ChimeraX-Mask: 1.0
ChimeraX-MatchMaker: 1.1
ChimeraX-MDcrds: 2.0
ChimeraX-MedicalToolbar: 1.0.1
ChimeraX-Meeting: 1.0
ChimeraX-MLP: 1.0
ChimeraX-mmCIF: 2.2
ChimeraX-MMTF: 2.0
ChimeraX-Modeller: 1.0
ChimeraX-ModelPanel: 1.0
ChimeraX-ModelSeries: 1.0
ChimeraX-Mol2: 2.0
ChimeraX-Morph: 1.0
ChimeraX-MouseModes: 1.0
ChimeraX-Movie: 1.0
ChimeraX-Neuron: 1.0
ChimeraX-Nucleotides: 2.0
ChimeraX-OpenCommand: 1.2.1
ChimeraX-PDB: 2.1
ChimeraX-PDBBio: 1.0
ChimeraX-PickBlobs: 1.0
ChimeraX-Positions: 1.0
ChimeraX-PresetMgr: 1.0
ChimeraX-PubChem: 2.0
ChimeraX-Read-Pbonds: 1.0
ChimeraX-Registration: 1.1
ChimeraX-RemoteControl: 1.0
ChimeraX-ResidueFit: 1.0
ChimeraX-RestServer: 1.0
ChimeraX-RNALayout: 1.0
ChimeraX-RotamerLibMgr: 2.0
ChimeraX-RotamerLibsDunbrack: 2.0
ChimeraX-RotamerLibsDynameomics: 2.0
ChimeraX-RotamerLibsRichardson: 2.0
ChimeraX-SaveCommand: 1.2
ChimeraX-SchemeMgr: 1.0
ChimeraX-SDF: 2.0
ChimeraX-Segger: 1.0
ChimeraX-Segment: 1.0
ChimeraX-SeqView: 2.2
ChimeraX-Shape: 1.0.1
ChimeraX-Shell: 1.0
ChimeraX-Shortcuts: 1.0
ChimeraX-ShowAttr: 1.0
ChimeraX-ShowSequences: 1.0
ChimeraX-SideView: 1.0
ChimeraX-Smiles: 2.0
ChimeraX-SmoothLines: 1.0
ChimeraX-SpaceNavigator: 1.0
ChimeraX-StdCommands: 1.0.4
ChimeraX-STL: 1.0
ChimeraX-Storm: 1.0
ChimeraX-Struts: 1.0
ChimeraX-Surface: 1.0
ChimeraX-SwapAA: 2.0
ChimeraX-SwapRes: 2.0
ChimeraX-TapeMeasure: 1.0
ChimeraX-Test: 1.0
ChimeraX-Toolbar: 1.0
ChimeraX-ToolshedUtils: 1.0
ChimeraX-Tug: 1.0
ChimeraX-UI: 1.2.3
ChimeraX-uniprot: 2.0
ChimeraX-ViewDockX: 1.0
ChimeraX-Vive: 1.1
ChimeraX-VolumeMenu: 1.0
ChimeraX-VTK: 1.0
ChimeraX-WavefrontOBJ: 1.0
ChimeraX-WebCam: 1.0
ChimeraX-WebServices: 1.0
ChimeraX-Zone: 1.0
colorama: 0.4.3
comtypes: 1.1.7
cxservices: 1.0
cycler: 0.10.0
Cython: 0.29.20
decorator: 4.4.2
distlib: 0.3.1
docutils: 0.16
filelock: 3.0.12
funcparserlib: 0.3.6
grako: 3.16.5
h5py: 2.10.0
html2text: 2020.1.16
idna: 2.10
ihm: 0.16
imagecodecs: 2020.5.30
imagecodecs-lite: 2020.1.31
imagesize: 1.2.0
ipykernel: 5.3.0
ipython: 7.15.0
ipython-genutils: 0.2.0
jedi: 0.17.2
Jinja2: 2.11.2
jupyter-client: 6.1.3
jupyter-core: 4.6.3
kiwisolver: 1.2.0
line-profiler: 2.1.2
lxml: 4.5.1
MarkupSafe: 1.1.1
matplotlib: 3.2.1
msgpack: 1.0.0
netifaces: 0.10.9
networkx: 2.4
numexpr: 2.7.1
numpy: 1.18.5
numpydoc: 1.0.0
openvr: 1.12.501
packaging: 20.4
parso: 0.7.1
pexpect: 4.8.0
pickleshare: 0.7.5
Pillow: 7.1.2
pip: 20.2.2
pkginfo: 1.5.0.1
prompt-toolkit: 3.0.7
psutil: 5.7.0
ptyprocess: 0.6.0
pycollada: 0.7.1
pydicom: 2.0.0
Pygments: 2.6.1
PyOpenGL: 3.1.5
PyOpenGL-accelerate: 3.1.5
pyparsing: 2.4.7
PyQt5-commercial: 5.12.3
PyQt5-sip: 4.19.19
PyQtWebEngine-commercial: 5.12.1
python-dateutil: 2.8.1
pytz: 2020.1
pyzmq: 19.0.2
qtconsole: 4.7.4
QtPy: 1.9.0
RandomWords: 0.3.0
requests: 2.24.0
scipy: 1.4.1
setuptools: 49.4.0
sfftk-rw: 0.6.6.dev0
six: 1.15.0
snowballstemmer: 2.0.0
sortedcontainers: 2.2.2
Sphinx: 3.1.1
sphinxcontrib-applehelp: 1.0.2
sphinxcontrib-blockdiag: 2.0.0
sphinxcontrib-devhelp: 1.0.2
sphinxcontrib-htmlhelp: 1.0.3
sphinxcontrib-jsmath: 1.0.1
sphinxcontrib-qthelp: 1.0.3
sphinxcontrib-serializinghtml: 1.1.4
suds-jurko: 0.6
tables: 3.6.1
tifffile: 2020.6.3
tinyarray: 1.2.2
tornado: 6.0.4
traitlets: 5.0.4
urllib3: 1.25.10
wcwidth: 0.2.5
webcolors: 1.11.1
wheel: 0.34.2
Change History (2)
comment:1 by , 5 years ago
| Component: | Unassigned → Graphics |
|---|---|
| Owner: | set to |
| Platform: | → all |
| Project: | → ChimeraX |
| Status: | new → assigned |
| Summary: | ChimeraX bug report submission → Graphics hardware encountered an error and was reset |
comment:2 by , 5 years ago
| Resolution: | → nonchimerax |
|---|---|
| Status: | assigned → closed |
Buggy Apple graphics driver: "Graphics hardware encountered an error and was reset: 0x00000813"
Apple's Intel graphics is prone to crashing with large structures. If you have a case where it always crashes I'd like to try it.
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Reported by Rao Bing