Opened 5 years ago

Closed 5 years ago

#3980 closed defect (not a bug)

coulombic missing

Reported by: chimerax-bug-report@… Owned by: Eric Pettersen
Priority: normal Milestone:
Component: Surface/Binding Analysis Version: 0.93
Keywords: Cc:
Blocked By: Blocking:
Notify when closed: Platform: all
Project: ChimeraX

Description 

The following bug report has been submitted:
Platform:        Darwin-17.7.0-x86_64-i386-64bit
ChimeraX Version: 0.93 (2020-03-14)
Description
(Describe the actions that caused this problem to occur here)
Hi professer,
I want to use  coulombic command colors molecular surfaces by ESP,but it report unknown command.

Log:
UCSF ChimeraX version: 0.93 (2020-03-14)  
© 2016-2020 Regents of the University of California. All rights reserved.  
How to cite UCSF ChimeraX  

> open "/Users/Xiaoxian Wu/Downloads/3eeb.pdb"

3eeb.pdb title:  
Structure of the V. Cholerae RTX cysteine protease domain [more info...]  
  
Chain information for 3eeb.pdb #1  
---  
Chain | Description  
A B | RTX toxin RTXA  
  
Non-standard residues in 3eeb.pdb #1  
---  
IHP — inositol hexakisphosphate (myo-inositol hexakisphosphate; inositol
1,2,3,4,5,6-hexakisphosphate)  
NA — sodium ion  
  

> open https://www.rbvi.ucsf.edu/chimerax/tutorials.html

Opened 'https://www.rbvi.ucsf.edu/chimerax/tutorials.html' in browser  

Unknown command: coulombic  

Unknown command: Science-2020-transcription-couped translation  

Unknown command: coulombic  

Unknown command: coulombic  

Unknown command: coulombic  

Unknown command: coulombic  

> show #1 surfaces

Unknown command: coulombic  

Unknown command: coulombic  

> help help:contact.html




OpenGL version: 4.1 INTEL-10.36.19
OpenGL renderer: Intel(R) Iris(TM) Graphics 6100
OpenGL vendor: Intel Inc.
File attachment: coulombic problems.jpeg

coulombic problems.jpeg​

Attachments (1)

coulombic problems.jpeg​ (371.3 KB ) - added by chimerax-bug-report@… 5 years ago.
Added by email2trac

Download all attachments as: .zip

Change History (3)

by chimerax-bug-report@…, 5 years ago

Attachment: coulombic problems.jpeg​ added

Added by email2trac

comment:1 by Eric Pettersen, 5 years ago

Component: Unassigned → Surface/Binding Analysis
Owner: set to Eric Pettersen
Platform: → all
Project: → ChimeraX
Status: new → accepted
Summary: ChimeraX bug report submission → coulombic missing
Version: → 0.93

comment:2 by Eric Pettersen, 5 years ago

Resolution: → not a bug
Status: accepted → closed

Hi,

The "coulombic" command is only in 1.1 and newer. You will need to install a newer version of ChimeraX than the 0.93 version that you are currently using.

--Eric

Eric Pettersen
UCSF Computer Graphics Lab

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