color-by-attr problem

[santiago.jus.are@…]

The following bug report has been submitted:
Platform:        Windows-10-10.0.18362
ChimeraX Version: 1.1.dev202007180211 (2020-07-18 02:11:31 UTC)
Description
I am not able to use the command of color byattribute using the palette argument

color byattribute identity_nsp5 palette 0,lightgray:1,aquamarine:75,pink:748,gold:7484,#04007e

Log:
UCSF ChimeraX version: 1.1.dev202007180211 (2020-07-18)  
© 2016-2020 Regents of the University of California. All rights reserved.  
How to cite UCSF ChimeraX  

> open 6y2g format mmcif fromDatabase pdb

Summary of feedback from opening 6y2g fetched from pdb  
---  
warning | Unable to infer polymer connectivity due to unspecified label_seq_id
for residue "GLY" near line 6023  
  
6y2g title:  
Crystal structure (orthorhombic form) of the complex resulting from the
reaction between SARS-CoV-2 (2019-nCoV) main protease and tert-butyl
(1-((S)-1-(((S)-4-(benzylamino)-3,4-dioxo-1-((S)-2-oxopyrrolidin-3-yl)butan-2-yl)amino)-3-cyclopropyl-1-oxopropan-2-yl)-2-oxo-1,2-dihydropyridin-3-yl)carbamate
(alpha-ketoamide 13b) [more info...]  
  
Chain information for 6y2g #1  
---  
Chain | Description  
A B | Replicase polyprotein 1ab  
  
Non-standard residues in 6y2g #1  
---  
O6K — ~{tert}-butyl
~{N}-[1-[(2~{S})-3-cyclopropyl-1-oxidanylidene-1-[[(2~{S},3~{R})-3-oxidanyl-4-oxidanylidene-1-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]-4-[(phenylmethyl)amino]butan-2-yl]amino]propan-2-yl]-2-oxidanylidene-
pyridin-3-yl]carbamate  
  

> select up

Nothing selected  

> select up

Nothing selected  

> open C:\Users\Santiago\Escritorio\nsp5_attribute_chimerax.cxc

> setattr :1 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :2 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :3 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :4 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :5 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :6 residues identity_nsp5 5 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :7 residues identity_nsp5 1 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :8 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :9 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :10 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :11 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :12 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :13 residues identity_nsp5 1 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :14 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :15 residues identity_nsp5 72 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :16 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :17 residues identity_nsp5 2 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :18 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :19 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :20 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :21 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :22 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :23 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :24 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :25 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :26 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :27 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :28 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :29 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :30 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :31 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :32 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :33 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :34 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :35 residues identity_nsp5 1 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :36 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :37 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :38 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :39 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :40 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :41 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :42 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :43 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :44 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :45 residues identity_nsp5 12 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :46 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :47 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :48 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :49 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :50 residues identity_nsp5 3 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :51 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :52 residues identity_nsp5 2 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :53 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :54 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :55 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :56 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :57 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :58 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :59 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :60 residues identity_nsp5 2 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :61 residues identity_nsp5 8 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :62 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :63 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :64 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :65 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :66 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :67 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :68 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :69 residues identity_nsp5 1 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :70 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :71 residues identity_nsp5 32 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :72 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :73 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :74 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :75 residues identity_nsp5 9 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :76 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :77 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :78 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :79 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :80 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :81 residues identity_nsp5 1 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :82 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :83 residues identity_nsp5 1 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :84 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :85 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :86 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :87 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :88 residues identity_nsp5 1 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :89 residues identity_nsp5 40 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :90 residues identity_nsp5 39 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :91 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :92 residues identity_nsp5 4 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :93 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :94 residues identity_nsp5 4 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :95 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :96 residues identity_nsp5 3 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :97 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :98 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :99 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :100 residues identity_nsp5 1 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :101 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :102 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :103 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :104 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :105 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :106 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :107 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :108 residues identity_nsp5 3 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :109 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :110 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :111 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :112 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :113 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :114 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :115 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :116 residues identity_nsp5 1 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :117 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :118 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :119 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :120 residues identity_nsp5 3 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :121 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :122 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :123 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :124 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :125 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :126 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :127 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :128 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :129 residues identity_nsp5 1 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :130 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :131 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :132 residues identity_nsp5 3 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :133 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :134 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :135 residues identity_nsp5 1 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :136 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :137 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :138 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :139 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :140 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :141 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :142 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :143 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :144 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :145 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :146 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :147 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :148 residues identity_nsp5 1 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :149 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :150 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :151 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :152 residues identity_nsp5 2 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :153 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :154 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :155 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :156 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :157 residues identity_nsp5 2 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :158 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :159 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :160 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :161 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :162 residues identity_nsp5 1 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :163 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :164 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :165 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :166 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :167 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :168 residues identity_nsp5 1 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :169 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :170 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :171 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :172 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :173 residues identity_nsp5 1 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :174 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :175 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :176 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :177 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :178 residues identity_nsp5 1 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :179 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :180 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :181 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :182 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :183 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :184 residues identity_nsp5 8 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :185 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :186 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :187 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :188 residues identity_nsp5 2 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :189 residues identity_nsp5 1 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :190 residues identity_nsp5 1 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :191 residues identity_nsp5 11 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :192 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :193 residues identity_nsp5 4 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :194 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :195 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :196 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :197 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :198 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :199 residues identity_nsp5 1 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :200 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :201 residues identity_nsp5 1 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :202 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :203 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :204 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :205 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :206 residues identity_nsp5 1 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :207 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :208 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :209 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :210 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :211 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :212 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :213 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :214 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :215 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :216 residues identity_nsp5 1 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :217 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :218 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :219 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :220 residues identity_nsp5 6 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :221 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :222 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :223 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :224 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :225 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :226 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :227 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :228 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :229 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :230 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :231 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :232 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :233 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :234 residues identity_nsp5 2 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :235 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :236 residues identity_nsp5 1 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :237 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :238 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :239 residues identity_nsp5 1 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :240 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :241 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :242 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :243 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :244 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :245 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :246 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :247 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :248 residues identity_nsp5 47 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :249 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :250 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :251 residues identity_nsp5 1 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :252 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :253 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :254 residues identity_nsp5 2 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :255 residues identity_nsp5 6 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :256 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :257 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :258 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :259 residues identity_nsp5 1 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :260 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :261 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :262 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :263 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :264 residues identity_nsp5 1 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :265 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :266 residues identity_nsp5 20 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :267 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :268 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :269 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :270 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :271 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :272 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :273 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :274 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :275 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :276 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :277 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :278 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :279 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :280 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :281 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :282 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :283 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :284 residues identity_nsp5 1 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :285 residues identity_nsp5 7 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :286 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :287 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :288 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :289 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :290 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :291 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :292 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :293 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :294 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :295 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :296 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :297 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :298 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :299 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :300 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :301 residues identity_nsp5 2 create true

Assigning identity_nsp5 attribute to 2 items  

> setattr :302 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 1 item  

> setattr :303 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 1 item  

> setattr :304 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 0 items  

> setattr :305 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 0 items  

> setattr :306 residues identity_nsp5 0 create true

Assigning identity_nsp5 attribute to 0 items  
executed nsp5_attribute_chimerax.cxc  

> color byattribute identity_nsp5 palette 0,blue:5,red

Failed command: color byattribute identity_nsp5 palette 0,blue:5,red  
Traceback (most recent call last):  
File "C:\Program Files\ChimeraX 1.1.dev202007180211\bin\lib\site-
packages\chimerax\cmd_line\tool.py", line 263, in execute  
cmd.run(cmd_text)  
File "C:\Program Files\ChimeraX 1.1.dev202007180211\bin\lib\site-
packages\chimerax\core\commands\cli.py", line 2805, in run  
result = ci.function(session, **kw_args)  
File "C:\Program Files\ChimeraX 1.1.dev202007180211\bin\lib\site-
packages\chimerax\std_commands\color.py", line 1163, in color_by_attr  
non_none_colors = _value_colors(palette, range, non_none_attr_vals)  
File "C:\Program Files\ChimeraX 1.1.dev202007180211\bin\lib\site-
packages\chimerax\std_commands\color.py", line 1279, in _value_colors  
if r[0] == r[1]:  
TypeError: 'NoneType' object is not subscriptable  
  
TypeError: 'NoneType' object is not subscriptable  
  
File "C:\Program Files\ChimeraX 1.1.dev202007180211\bin\lib\site-
packages\chimerax\std_commands\color.py", line 1279, in _value_colors  
if r[0] == r[1]:  
  
See log for complete Python traceback.  
  

> color byattribute identity_nsp5 palette
> 0,lightgray:1,aquamarine:75,pink:748,gold:7484,#04007e

Failed command: color byattribute identity_nsp5 palette
0,lightgray:1,aquamarine:75,pink:748,gold:7484,#04007e  
Traceback (most recent call last):  
File "C:\Program Files\ChimeraX 1.1.dev202007180211\bin\lib\site-
packages\chimerax\cmd_line\tool.py", line 263, in execute  
cmd.run(cmd_text)  
File "C:\Program Files\ChimeraX 1.1.dev202007180211\bin\lib\site-
packages\chimerax\core\commands\cli.py", line 2805, in run  
result = ci.function(session, **kw_args)  
File "C:\Program Files\ChimeraX 1.1.dev202007180211\bin\lib\site-
packages\chimerax\std_commands\color.py", line 1163, in color_by_attr  
non_none_colors = _value_colors(palette, range, non_none_attr_vals)  
File "C:\Program Files\ChimeraX 1.1.dev202007180211\bin\lib\site-
packages\chimerax\std_commands\color.py", line 1279, in _value_colors  
if r[0] == r[1]:  
TypeError: 'NoneType' object is not subscriptable  
  
TypeError: 'NoneType' object is not subscriptable  
  
File "C:\Program Files\ChimeraX 1.1.dev202007180211\bin\lib\site-
packages\chimerax\std_commands\color.py", line 1279, in _value_colors  
if r[0] == r[1]:  
  
See log for complete Python traceback.  
  




OpenGL version: 3.3.0 NVIDIA 388.16
OpenGL renderer: GeForce GTX 1060/PCIe/SSE2
OpenGL vendor: NVIDIA Corporation
Manufacturer: Acer
Model: Predator G3-572
OS: Microsoft Windows 10 Home Single Language (Build 18362)
Memory: 17,057,812,480
MaxProcessMemory: 137,438,953,344
CPU: 8 Intel(R) Core(TM) i7-7700HQ CPU @ 2.80GHz"
PyQt version: 5.12.3
Compiled Qt version: 5.12.4
Runtime Qt version: 5.12.9

[Eric Pettersen]

Hi Santiago,

This problem was caused by a relatively recent code change. I have now fixed the new problem and the fix will be in tomorrow's build.

--Eric