Opened 5 years ago
Closed 5 years ago
#3493 closed defect (nonchimerax)
Strudel Score: self.map_chim is None
Reported by: | Owned by: | Eric Pettersen | |
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Priority: | normal | Milestone: | |
Component: | Third Party | Version: | |
Keywords: | Cc: | ||
Blocked By: | Blocking: | ||
Notify when closed: | Platform: | all | |
Project: | ChimeraX |
Description
The following bug report has been submitted: Platform: Darwin-18.7.0-x86_64-i386-64bit ChimeraX Version: 1.0 (2020-06-04 23:15:07 UTC) Description (Describe the actions that caused this problem to occur here) Log: UCSF ChimeraX version: 1.0 (2020-06-04) © 2016-2020 Regents of the University of California. All rights reserved. How to cite UCSF ChimeraX > ui tool show "Strudel Score" Inject data called fill selectors called all chains (fill selectors) ['No chains found'] All chains (set data) ['A', 'B', 'C', 'D'] active chain (set data) A Running: close all > close all Running: open /Users/gerard/downloads/strudel/30178_1.6/out_old_mod/input/emd_30178.map > open > /Users/gerard/downloads/strudel/30178_1.6/out_old_mod/input/emd_30178.map Opened emd_30178.map, grid size 300,300,300, pixel 0.82, shown at level 0.183, step 2, values float32 Traceback (most recent call last): File "/Users/gerard/Library/Application Support/ChimeraX/1.0/site- packages/chimerax/strudel_score/tool.py", line 281, in open_project self.load_map_model() File "/Users/gerard/Library/Application Support/ChimeraX/1.0/site- packages/chimerax/strudel_score/tool.py", line 303, in load_map_model self.run_x(f'volume #{self.map_chim.id_string} sdLevel {SD_LEVEL + 2} style mesh step 1') AttributeError: 'NoneType' object has no attribute 'id_string' AttributeError: 'NoneType' object has no attribute 'id_string' File "/Users/gerard/Library/Application Support/ChimeraX/1.0/site- packages/chimerax/strudel_score/tool.py", line 303, in load_map_model self.run_x(f'volume #{self.map_chim.id_string} sdLevel {SD_LEVEL + 2} style mesh step 1') See log for complete Python traceback. OpenGL version: 4.1 INTEL-12.10.19 OpenGL renderer: Intel(R) Iris(TM) Graphics 550 OpenGL vendor: Intel Inc.Hardware: Hardware Overview: Model Name: MacBook Pro Model Identifier: MacBookPro13,2 Processor Name: Intel Core i7 Processor Speed: 3.3 GHz Number of Processors: 1 Total Number of Cores: 2 L2 Cache (per Core): 256 KB L3 Cache: 4 MB Hyper-Threading Technology: Enabled Memory: 16 GB Boot ROM Version: 267.0.0.0.0 SMC Version (system): 2.37f20 Software: System Software Overview: System Version: macOS 10.14.6 (18G5033) Kernel Version: Darwin 18.7.0 Time since boot: 2 days 7:38 Graphics/Displays: Intel Iris Graphics 550: Chipset Model: Intel Iris Graphics 550 Type: GPU Bus: Built-In VRAM (Dynamic, Max): 1536 MB Vendor: Intel Device ID: 0x1927 Revision ID: 0x000a Metal: Supported, feature set macOS GPUFamily2 v1 Displays: LG UltraFine: Resolution: 5120 x 2880 (5K/UHD+ - Ultra High Definition Plus) UI Looks like: 2560 x 1440 Framebuffer Depth: 30-Bit Color (ARGB2101010) Main Display: Yes Mirror: Off Online: Yes Rotation: Supported Automatically Adjust Brightness: No PyQt version: 5.12.3 Compiled Qt version: 5.12.4 Runtime Qt version: 5.12.8
Change History (2)
comment:1 by , 5 years ago
Component: | Unassigned → Third Party |
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Owner: | set to |
Platform: | → all |
Project: | → ChimeraX |
Status: | new → accepted |
Summary: | ChimeraX bug report submission → Strudel Score: self.map_chim is None |
comment:2 by , 5 years ago
Resolution: | → nonchimerax |
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Status: | accepted → closed |
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