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Opened 5 years ago
Closed 5 years ago
#3444 closed defect (can't reproduce)
crash when closing Rotamers dialog
| Reported by: | Elaine Meng | Owned by: | Eric Pettersen |
|---|---|---|---|
| Priority: | normal | Milestone: | |
| Component: | Platform | Version: | |
| Keywords: | Cc: | ||
| Blocked By: | Blocking: | ||
| Notify when closed: | Platform: | all | |
| Project: | ChimeraX |
Description
The following bug report has been submitted:
Platform: Darwin-18.7.0-x86_64-i386-64bit
ChimeraX Version: 1.1.dev202006250025 (2020-06-25 00:25:38 UTC)
Description
Last time you used ChimeraX it crashed.
Please describe steps that led to the crash here.
Probably another non-reproducible special. Closed Rotamers dialog but it was almost on top of the Toolbar and Toolbar was enlarged like Rotamers was about to dock on top of it (but didn't, maybe because too large).
Process: ChimeraX [10849]
Path: /Users/USER/Desktop/ChimeraX_Daily.app/Contents/MacOS/ChimeraX
Identifier: edu.ucsf.cgl.ChimeraX
Version: 1.1.0 (1.1.0.0)
Code Type: X86-64 (Native)
Parent Process: ??? [1]
Responsible: ChimeraX [10849]
User ID: 504
Date/Time: 2020-06-25 15:25:34.610 -0700
OS Version: Mac OS X 10.14.6 (18G5033)
Report Version: 12
Anonymous UUID: 2E059A98-7BEC-0474-05F4-65B7CBAB8B4F
Sleep/Wake UUID: 5A2FD4FC-3CED-4A29-8A52-D6B0A3048DED
Time Awake Since Boot: 24000 seconds
Time Since Wake: 15000 seconds
System Integrity Protection: enabled
Crashed Thread: 0 CrBrowserMain Dispatch queue: com.apple.main-thread
Exception Type: EXC_BAD_ACCESS (SIGSEGV)
Exception Codes: KERN_INVALID_ADDRESS at 0x00002b874ead9288
Exception Note: EXC_CORPSE_NOTIFY
VM Regions Near 0x2b874ead9288:
MALLOC_LARGE_REUSABLE 000000013e239000-000000013e86f000 [ 6360K] rw-/rwx SM=PRV
-->
MALLOC_NANO 0000600000000000-0000600008000000 [128.0M] rw-/rwx SM=PRV
Application Specific Information:
Calling windowShouldClose: on the delegate for the QNSPanel 0x7fcc61e9e090
Thread 0 Crashed:: CrBrowserMain Dispatch queue: com.apple.main-thread
0 libsystem_kernel.dylib 0x00007fff65f292c2 __pthread_kill + 10
1 libsystem_pthread.dylib 0x00007fff65fe4bf1 pthread_kill + 284
2 libsystem_c.dylib 0x00007fff65e46d8a raise + 26
3 libsystem_platform.dylib 0x00007fff65fd9b5d _sigtramp + 29
4 ??? 000000000000000000 0 + 0
5 QtWidgets 0x0000000116bf1951 QMainWindow::removeDockWidget(QDockWidget*) + 33
6 QtWidgets.so 0x00000001166d78bf meth_QMainWindow_removeDockWidget(_object*, _object*) + 95
7 org.python.python 0x00000001096de392 _PyMethodDef_RawFastCallKeywords + 226
8 org.python.python 0x00000001096dd8b9 _PyCFunction_FastCallKeywords + 41
9 org.python.python 0x00000001097b2af0 call_function + 656
10 org.python.python 0x00000001097af7a7 _PyEval_EvalFrameDefault + 26567
11 org.python.python 0x00000001096ddd61 function_code_fastcall + 177
12 org.python.python 0x00000001097b2b64 call_function + 772
13 org.python.python 0x00000001097af78a _PyEval_EvalFrameDefault + 26538
14 org.python.python 0x00000001096ddd61 function_code_fastcall + 177
15 org.python.python 0x00000001097b2b64 call_function + 772
16 org.python.python 0x00000001097af78a _PyEval_EvalFrameDefault + 26538
17 org.python.python 0x00000001096ddd61 function_code_fastcall + 177
18 org.python.python 0x00000001097b2b64 call_function + 772
19 org.python.python 0x00000001097af7a7 _PyEval_EvalFrameDefault + 26567
20 org.python.python 0x00000001096ddd61 function_code_fastcall + 177
21 org.python.python 0x00000001097b2b64 call_function + 772
22 org.python.python 0x00000001097af7a7 _PyEval_EvalFrameDefault + 26567
23 org.python.python 0x00000001096ddd61 function_code_fastcall + 177
24 org.python.python 0x00000001097b2b64 call_function + 772
25 org.python.python 0x00000001097af7a7 _PyEval_EvalFrameDefault + 26567
26 org.python.python 0x00000001097b39bc _PyEval_EvalCodeWithName + 3276
27 org.python.python 0x00000001096dd879 _PyFunction_FastCallKeywords + 217
28 org.python.python 0x00000001097b2b64 call_function + 772
29 org.python.python 0x00000001097af78a _PyEval_EvalFrameDefault + 26538
30 org.python.python 0x00000001097b39bc _PyEval_EvalCodeWithName + 3276
31 org.python.python 0x00000001096dd879 _PyFunction_FastCallKeywords + 217
32 org.python.python 0x00000001097b2b64 call_function + 772
33 org.python.python 0x00000001097af7a7 _PyEval_EvalFrameDefault + 26567
34 org.python.python 0x00000001097b39bc _PyEval_EvalCodeWithName + 3276
35 org.python.python 0x00000001096dd377 _PyFunction_FastCallDict + 455
36 sip.so 0x0000000117baff7a call_method + 76
37 sip.so 0x0000000117babd07 sip_api_call_procedure_method + 152
38 QtWidgets.so 0x0000000116628757 sipQDockWidget::closeEvent(QCloseEvent*) + 103
39 QtWidgets 0x0000000116ae0749 QWidget::event(QEvent*) + 1209
40 QtWidgets 0x0000000116bbcf58 QDockWidget::event(QEvent*) + 808
41 QtWidgets.so 0x0000000116627750 sipQDockWidget::event(QEvent*) + 192
42 QtWidgets 0x0000000116aa470d QApplicationPrivate::notify_helper(QObject*, QEvent*) + 269
43 QtWidgets 0x0000000116aa5b12 QApplication::notify(QObject*, QEvent*) + 594
44 QtWidgets.so 0x00000001166643ca sipQApplication::notify(QObject*, QEvent*) + 234
45 QtCore 0x00000001177904c4 QCoreApplication::notifyInternal2(QObject*, QEvent*) + 212
46 QtWidgets 0x0000000116acf735 QWidgetPrivate::close_helper(QWidgetPrivate::CloseMode) + 165
47 QtWidgets 0x0000000116afe7f0 0x116a94000 + 436208
48 QtWidgets 0x0000000116aa470d QApplicationPrivate::notify_helper(QObject*, QEvent*) + 269
49 QtWidgets 0x0000000116aa5b12 QApplication::notify(QObject*, QEvent*) + 594
50 QtWidgets.so 0x00000001166643ca sipQApplication::notify(QObject*, QEvent*) + 234
51 QtCore 0x00000001177904c4 QCoreApplication::notifyInternal2(QObject*, QEvent*) + 212
52 QtGui 0x00000001170788e1 QGuiApplicationPrivate::processWindowSystemEvent(QWindowSystemInterfacePrivate::WindowSystemEvent*) + 2241
53 QtGui 0x00000001170606db QWindowSystemInterface::sendWindowSystemEvents(QFlags) + 219
54 QtGui 0x000000011705b615 QWindowSystemInterface::flushWindowSystemEvents(QFlags) + 581
55 libqcocoa.dylib 0x000000012147b26d 0x12145c000 + 127597
56 libqcocoa.dylib 0x000000012148fd05 0x12145c000 + 212229
57 com.apple.AppKit 0x00007fff378318ec __19-[NSWindow __close]_block_invoke + 184
58 com.apple.AppKit 0x00007fff37831827 -[NSWindow __close] + 292
59 com.apple.AppKit 0x00007fff37748644 -[NSApplication(NSResponder) sendAction:to:from:] + 312
60 com.apple.AppKit 0x00007fff377b2992 -[NSControl sendAction:to:] + 86
61 com.apple.AppKit 0x00007fff377b28c4 __26-[NSCell _sendActionFrom:]_block_invoke + 136
62 com.apple.AppKit 0x00007fff377b27c6 -[NSCell _sendActionFrom:] + 178
63 com.apple.AppKit 0x00007fff377df54b -[NSButtonCell _sendActionFrom:] + 96
64 com.apple.AppKit 0x00007fff377b10e1 -[NSCell trackMouse:inRect:ofView:untilMouseUp:] + 2375
65 com.apple.AppKit 0x00007fff377df29c -[NSButtonCell trackMouse:inRect:ofView:untilMouseUp:] + 698
66 com.apple.AppKit 0x00007fff377afb1e -[NSControl mouseDown:] + 791
67 com.apple.AppKit 0x00007fff3781925d -[_NSThemeWidget mouseDown:] + 86
68 com.apple.AppKit 0x00007fff3768b937 -[NSWindow(NSEventRouting) _handleMouseDownEvent:isDelayedEvent:] + 5724
69 com.apple.AppKit 0x00007fff375c21a6 -[NSWindow(NSEventRouting) _reallySendEvent:isDelayedEvent:] + 2295
70 com.apple.AppKit 0x00007fff375c1667 -[NSWindow(NSEventRouting) sendEvent:] + 478
71 libqcocoa.dylib 0x000000012148f775 0x12145c000 + 210805
72 com.apple.AppKit 0x00007fff37460e4b -[NSApplication(NSEvent) sendEvent:] + 331
73 libqcocoa.dylib 0x000000012149570a 0x12145c000 + 235274
74 com.apple.AppKit 0x00007fff3744f5c0 -[NSApplication run] + 755
75 libqcocoa.dylib 0x0000000121491de3 0x12145c000 + 220643
76 QtCore 0x000000011778badf QEventLoop::exec(QFlags) + 431
77 QtCore 0x0000000117790ad2 QCoreApplication::exec() + 130
78 QtWidgets.so 0x00000001167537d2 meth_QApplication_exec_(_object*, _object*) + 82
79 org.python.python 0x00000001096de392 _PyMethodDef_RawFastCallKeywords + 226
80 org.python.python 0x00000001096dd8b9 _PyCFunction_FastCallKeywords + 41
81 org.python.python 0x00000001097b2af0 call_function + 656
82 org.python.python 0x00000001097af7a7 _PyEval_EvalFrameDefault + 26567
83 org.python.python 0x00000001096ddd61 function_code_fastcall + 177
84 org.python.python 0x00000001097b2b64 call_function + 772
85 org.python.python 0x00000001097af7a7 _PyEval_EvalFrameDefault + 26567
86 org.python.python 0x00000001097b39bc _PyEval_EvalCodeWithName + 3276
87 org.python.python 0x00000001096dd879 _PyFunction_FastCallKeywords + 217
88 org.python.python 0x00000001097b2b64 call_function + 772
89 org.python.python 0x00000001097af83e _PyEval_EvalFrameDefault + 26718
90 org.python.python 0x00000001097b39bc _PyEval_EvalCodeWithName + 3276
91 org.python.python 0x00000001097a8f40 PyEval_EvalCode + 48
92 org.python.python 0x00000001097a64d7 builtin_exec + 583
93 org.python.python 0x00000001096de545 _PyMethodDef_RawFastCallKeywords + 661
94 org.python.python 0x00000001096dd8b9 _PyCFunction_FastCallKeywords + 41
95 org.python.python 0x00000001097b2af0 call_function + 656
96 org.python.python 0x00000001097af83e _PyEval_EvalFrameDefault + 26718
97 org.python.python 0x00000001097b39bc _PyEval_EvalCodeWithName + 3276
98 org.python.python 0x00000001096dd879 _PyFunction_FastCallKeywords + 217
99 org.python.python 0x00000001097b2b64 call_function + 772
100 org.python.python 0x00000001097af83e _PyEval_EvalFrameDefault + 26718
101 org.python.python 0x00000001097b39bc _PyEval_EvalCodeWithName + 3276
102 org.python.python 0x00000001096dd377 _PyFunction_FastCallDict + 455
103 org.python.python 0x000000010980da83 pymain_run_module + 147
104 org.python.python 0x000000010980cb6c pymain_main + 5900
105 org.python.python 0x000000010980b453 Py_Main + 51
106 edu.ucsf.cgl.ChimeraX 0x00000001096b1dc8 main + 120
107 libdyld.dylib 0x00007fff65dee3d5 start + 1
Thread 1:
0 libsystem_kernel.dylib 0x00007fff65f26866 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff65fe556e _pthread_cond_wait + 722
2 libopenblasp-r0.3.7.dylib 0x000000010b1f1c3b blas_thread_server + 619
3 libsystem_pthread.dylib 0x00007fff65fe22eb _pthread_body + 126
4 libsystem_pthread.dylib 0x00007fff65fe5249 _pthread_start + 66
5 libsystem_pthread.dylib 0x00007fff65fe140d thread_start + 13
Thread 2:
0 libsystem_kernel.dylib 0x00007fff65f26866 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff65fe556e _pthread_cond_wait + 722
2 libopenblasp-r0.3.7.dylib 0x000000010b1f1c3b blas_thread_server + 619
3 libsystem_pthread.dylib 0x00007fff65fe22eb _pthread_body + 126
4 libsystem_pthread.dylib 0x00007fff65fe5249 _pthread_start + 66
5 libsystem_pthread.dylib 0x00007fff65fe140d thread_start + 13
Thread 3:
0 libsystem_kernel.dylib 0x00007fff65f26866 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff65fe556e _pthread_cond_wait + 722
2 libopenblasp-r0.3.7.dylib 0x000000010b1f1c3b blas_thread_server + 619
3 libsystem_pthread.dylib 0x00007fff65fe22eb _pthread_body + 126
4 libsystem_pthread.dylib 0x00007fff65fe5249 _pthread_start + 66
5 libsystem_pthread.dylib 0x00007fff65fe140d thread_start + 13
Thread 4:: com.apple.NSEventThread
0 libsystem_kernel.dylib 0x00007fff65f2321a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff65f23768 mach_msg + 60
2 com.apple.CoreFoundation 0x00007fff39e6187e __CFRunLoopServiceMachPort + 328
3 com.apple.CoreFoundation 0x00007fff39e60dec __CFRunLoopRun + 1612
4 com.apple.CoreFoundation 0x00007fff39e6054e CFRunLoopRunSpecific + 455
5 com.apple.AppKit 0x00007fff3745e4a2 _NSEventThread + 175
6 libsystem_pthread.dylib 0x00007fff65fe22eb _pthread_body + 126
7 libsystem_pthread.dylib 0x00007fff65fe5249 _pthread_start + 66
8 libsystem_pthread.dylib 0x00007fff65fe140d thread_start + 13
Thread 5:: NetworkConfigWatcher
0 libsystem_kernel.dylib 0x00007fff65f2321a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff65f23768 mach_msg + 60
2 QtWebEngineCore 0x000000011a58e2ad 0x1183e3000 + 35304109
3 QtWebEngineCore 0x000000011a58e1af 0x1183e3000 + 35303855
4 QtWebEngineCore 0x000000011a541fdd 0x1183e3000 + 34992093
5 QtWebEngineCore 0x000000011a56b005 0x1183e3000 + 35160069
6 QtWebEngineCore 0x000000011a5bd93c 0x1183e3000 + 35498300
7 QtWebEngineCore 0x000000011a5fd697 0x1183e3000 + 35759767
8 libsystem_pthread.dylib 0x00007fff65fe22eb _pthread_body + 126
9 libsystem_pthread.dylib 0x00007fff65fe5249 _pthread_start + 66
10 libsystem_pthread.dylib 0x00007fff65fe140d thread_start + 13
Thread 6:: DnsConfigService
0 libsystem_kernel.dylib 0x00007fff65f2978a kevent + 10
1 QtWebEngineCore 0x000000011a84f929 0x1183e3000 + 38193449
2 QtWebEngineCore 0x000000011a84cc3d 0x1183e3000 + 38181949
3 QtWebEngineCore 0x000000011a603c5c 0x1183e3000 + 35785820
4 QtWebEngineCore 0x000000011a56b005 0x1183e3000 + 35160069
5 QtWebEngineCore 0x000000011a5bd93c 0x1183e3000 + 35498300
6 QtWebEngineCore 0x000000011a5fd697 0x1183e3000 + 35759767
7 libsystem_pthread.dylib 0x00007fff65fe22eb _pthread_body + 126
8 libsystem_pthread.dylib 0x00007fff65fe5249 _pthread_start + 66
9 libsystem_pthread.dylib 0x00007fff65fe140d thread_start + 13
Thread 7:: TaskSchedulerServiceThread
0 libsystem_kernel.dylib 0x00007fff65f2978a kevent + 10
1 QtWebEngineCore 0x000000011a84f929 0x1183e3000 + 38193449
2 QtWebEngineCore 0x000000011a84cc3d 0x1183e3000 + 38181949
3 QtWebEngineCore 0x000000011a603c44 0x1183e3000 + 35785796
4 QtWebEngineCore 0x000000011a56b005 0x1183e3000 + 35160069
5 QtWebEngineCore 0x000000011a5ac9f4 0x1183e3000 + 35428852
6 QtWebEngineCore 0x000000011a5bd93c 0x1183e3000 + 35498300
7 QtWebEngineCore 0x000000011a5fd697 0x1183e3000 + 35759767
8 libsystem_pthread.dylib 0x00007fff65fe22eb _pthread_body + 126
9 libsystem_pthread.dylib 0x00007fff65fe5249 _pthread_start + 66
10 libsystem_pthread.dylib 0x00007fff65fe140d thread_start + 13
Thread 8:: TaskSchedulerForegroundWorker
0 libsystem_kernel.dylib 0x00007fff65f2321a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff65f23768 mach_msg + 60
2 QtWebEngineCore 0x000000011a58e2ad 0x1183e3000 + 35304109
3 QtWebEngineCore 0x000000011a58e3a1 0x1183e3000 + 35304353
4 QtWebEngineCore 0x000000011a5a5ca8 0x1183e3000 + 35400872
5 QtWebEngineCore 0x000000011a5a65db 0x1183e3000 + 35403227
6 QtWebEngineCore 0x000000011a5a6244 0x1183e3000 + 35402308
7 QtWebEngineCore 0x000000011a5fd697 0x1183e3000 + 35759767
8 libsystem_pthread.dylib 0x00007fff65fe22eb _pthread_body + 126
9 libsystem_pthread.dylib 0x00007fff65fe5249 _pthread_start + 66
10 libsystem_pthread.dylib 0x00007fff65fe140d thread_start + 13
Thread 9:: TaskSchedulerForegroundBlockingWorker
0 libsystem_kernel.dylib 0x00007fff65f2321a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff65f23768 mach_msg + 60
2 QtWebEngineCore 0x000000011a58e2ad 0x1183e3000 + 35304109
3 QtWebEngineCore 0x000000011a58e3a1 0x1183e3000 + 35304353
4 QtWebEngineCore 0x000000011a5a5ca8 0x1183e3000 + 35400872
5 QtWebEngineCore 0x000000011a5a65db 0x1183e3000 + 35403227
6 QtWebEngineCore 0x000000011a5a6244 0x1183e3000 + 35402308
7 QtWebEngineCore 0x000000011a5fd697 0x1183e3000 + 35759767
8 libsystem_pthread.dylib 0x00007fff65fe22eb _pthread_body + 126
9 libsystem_pthread.dylib 0x00007fff65fe5249 _pthread_start + 66
10 libsystem_pthread.dylib 0x00007fff65fe140d thread_start + 13
Thread 10:: TaskSchedulerForegroundBlockingWorker
0 libsystem_kernel.dylib 0x00007fff65f2321a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff65f23768 mach_msg + 60
2 QtWebEngineCore 0x000000011a58e2ad 0x1183e3000 + 35304109
3 QtWebEngineCore 0x000000011a58e3a1 0x1183e3000 + 35304353
4 QtWebEngineCore 0x000000011a5a5ca8 0x1183e3000 + 35400872
5 QtWebEngineCore 0x000000011a5a65db 0x1183e3000 + 35403227
6 QtWebEngineCore 0x000000011a5a6244 0x1183e3000 + 35402308
7 QtWebEngineCore 0x000000011a5fd697 0x1183e3000 + 35759767
8 libsystem_pthread.dylib 0x00007fff65fe22eb _pthread_body + 126
9 libsystem_pthread.dylib 0x00007fff65fe5249 _pthread_start + 66
10 libsystem_pthread.dylib 0x00007fff65fe140d thread_start + 13
Thread 11:: TaskSchedulerBackgroundWorker
0 libsystem_kernel.dylib 0x00007fff65f2321a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff65f23768 mach_msg + 60
2 QtWebEngineCore 0x000000011a58e2ad 0x1183e3000 + 35304109
3 QtWebEngineCore 0x000000011a58e3a1 0x1183e3000 + 35304353
4 QtWebEngineCore 0x000000011a5a5ca8 0x1183e3000 + 35400872
5 QtWebEngineCore 0x000000011a5a65db 0x1183e3000 + 35403227
6 QtWebEngineCore 0x000000011a5a61b4 0x1183e3000 + 35402164
7 QtWebEngineCore 0x000000011a5fd697 0x1183e3000 + 35759767
8 libsystem_pthread.dylib 0x00007fff65fe22eb _pthread_body + 126
9 libsystem_pthread.dylib 0x00007fff65fe5249 _pthread_start + 66
10 libsystem_pthread.dylib 0x00007fff65fe140d thread_start + 13
Thread 12:: TaskSchedulerBackgroundBlockingWorker
0 libsystem_kernel.dylib 0x00007fff65f2321a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff65f23768 mach_msg + 60
2 QtWebEngineCore 0x000000011a58e2ad 0x1183e3000 + 35304109
3 QtWebEngineCore 0x000000011a58e3a1 0x1183e3000 + 35304353
4 QtWebEngineCore 0x000000011a5a5ca8 0x1183e3000 + 35400872
5 QtWebEngineCore 0x000000011a5a65db 0x1183e3000 + 35403227
6 QtWebEngineCore 0x000000011a5a61b4 0x1183e3000 + 35402164
7 QtWebEngineCore 0x000000011a5fd697 0x1183e3000 + 35759767
8 libsystem_pthread.dylib 0x00007fff65fe22eb _pthread_body + 126
9 libsystem_pthread.dylib 0x00007fff65fe5249 _pthread_start + 66
10 libsystem_pthread.dylib 0x00007fff65fe140d thread_start + 13
Thread 13:: Chrome_IOThread
0 libsystem_kernel.dylib 0x00007fff65f2978a kevent + 10
1 QtWebEngineCore 0x000000011a84f929 0x1183e3000 + 38193449
2 QtWebEngineCore 0x000000011a84cc3d 0x1183e3000 + 38181949
3 QtWebEngineCore 0x000000011a603c44 0x1183e3000 + 35785796
4 QtWebEngineCore 0x000000011a56b005 0x1183e3000 + 35160069
5 QtWebEngineCore 0x0000000119ed0fa4 0x1183e3000 + 28237732
6 QtWebEngineCore 0x000000011a5bd93c 0x1183e3000 + 35498300
7 QtWebEngineCore 0x000000011a5fd697 0x1183e3000 + 35759767
8 libsystem_pthread.dylib 0x00007fff65fe22eb _pthread_body + 126
9 libsystem_pthread.dylib 0x00007fff65fe5249 _pthread_start + 66
10 libsystem_pthread.dylib 0x00007fff65fe140d thread_start + 13
Thread 14:: TaskSchedulerSingleThreadSharedBackgroundBlocking0
0 libsystem_kernel.dylib 0x00007fff65f2321a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff65f23768 mach_msg + 60
2 QtWebEngineCore 0x000000011a58e2ad 0x1183e3000 + 35304109
3 QtWebEngineCore 0x000000011a58e1af 0x1183e3000 + 35303855
4 QtWebEngineCore 0x000000011a5a5c9a 0x1183e3000 + 35400858
5 QtWebEngineCore 0x000000011a5a633f 0x1183e3000 + 35402559
6 QtWebEngineCore 0x000000011a5a61e4 0x1183e3000 + 35402212
7 QtWebEngineCore 0x000000011a5fd697 0x1183e3000 + 35759767
8 libsystem_pthread.dylib 0x00007fff65fe22eb _pthread_body + 126
9 libsystem_pthread.dylib 0x00007fff65fe5249 _pthread_start + 66
10 libsystem_pthread.dylib 0x00007fff65fe140d thread_start + 13
Thread 15:: CompositorTileWorker1/57603
0 libsystem_kernel.dylib 0x00007fff65f26866 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff65fe556e _pthread_cond_wait + 722
2 QtWebEngineCore 0x000000011a5fbf28 0x1183e3000 + 35753768
3 QtWebEngineCore 0x000000011b584628 0x1183e3000 + 52041256
4 QtWebEngineCore 0x000000011a5bc614 0x1183e3000 + 35493396
5 QtWebEngineCore 0x000000011a5fd697 0x1183e3000 + 35759767
6 libsystem_pthread.dylib 0x00007fff65fe22eb _pthread_body + 126
7 libsystem_pthread.dylib 0x00007fff65fe5249 _pthread_start + 66
8 libsystem_pthread.dylib 0x00007fff65fe140d thread_start + 13
Thread 16:: AudioThread
0 libsystem_kernel.dylib 0x00007fff65f2321a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff65f23768 mach_msg + 60
2 QtWebEngineCore 0x000000011a58e2ad 0x1183e3000 + 35304109
3 QtWebEngineCore 0x000000011a58e1af 0x1183e3000 + 35303855
4 QtWebEngineCore 0x000000011a541fdd 0x1183e3000 + 34992093
5 QtWebEngineCore 0x000000011a56b005 0x1183e3000 + 35160069
6 QtWebEngineCore 0x000000011a5bd93c 0x1183e3000 + 35498300
7 QtWebEngineCore 0x000000011a5fd697 0x1183e3000 + 35759767
8 libsystem_pthread.dylib 0x00007fff65fe22eb _pthread_body + 126
9 libsystem_pthread.dylib 0x00007fff65fe5249 _pthread_start + 66
10 libsystem_pthread.dylib 0x00007fff65fe140d thread_start + 13
Thread 17:: Chrome_InProcGpuThread
0 libsystem_kernel.dylib 0x00007fff65f2321a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff65f23768 mach_msg + 60
2 QtWebEngineCore 0x000000011a58e2ad 0x1183e3000 + 35304109
3 QtWebEngineCore 0x000000011a541fd2 0x1183e3000 + 34992082
4 QtWebEngineCore 0x000000011a56b005 0x1183e3000 + 35160069
5 QtWebEngineCore 0x000000011a5bd93c 0x1183e3000 + 35498300
6 QtWebEngineCore 0x000000011a5fd697 0x1183e3000 + 35759767
7 libsystem_pthread.dylib 0x00007fff65fe22eb _pthread_body + 126
8 libsystem_pthread.dylib 0x00007fff65fe5249 _pthread_start + 66
9 libsystem_pthread.dylib 0x00007fff65fe140d thread_start + 13
Thread 18:: Chrome_ChildIOThread
0 libsystem_kernel.dylib 0x00007fff65f2978a kevent + 10
1 QtWebEngineCore 0x000000011a84f929 0x1183e3000 + 38193449
2 QtWebEngineCore 0x000000011a84cc3d 0x1183e3000 + 38181949
3 QtWebEngineCore 0x000000011a603c5c 0x1183e3000 + 35785820
4 QtWebEngineCore 0x000000011a56b005 0x1183e3000 + 35160069
5 QtWebEngineCore 0x000000011a5bd93c 0x1183e3000 + 35498300
6 QtWebEngineCore 0x000000011a5fd697 0x1183e3000 + 35759767
7 libsystem_pthread.dylib 0x00007fff65fe22eb _pthread_body + 126
8 libsystem_pthread.dylib 0x00007fff65fe5249 _pthread_start + 66
9 libsystem_pthread.dylib 0x00007fff65fe140d thread_start + 13
Thread 19:: NetworkConfigWatcher
0 libsystem_kernel.dylib 0x00007fff65f2321a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff65f23768 mach_msg + 60
2 QtWebEngineCore 0x000000011a58e2ad 0x1183e3000 + 35304109
3 QtWebEngineCore 0x000000011a58e1af 0x1183e3000 + 35303855
4 QtWebEngineCore 0x000000011a541fdd 0x1183e3000 + 34992093
5 QtWebEngineCore 0x000000011a56b005 0x1183e3000 + 35160069
6 QtWebEngineCore 0x000000011a5bd93c 0x1183e3000 + 35498300
7 QtWebEngineCore 0x000000011a5fd697 0x1183e3000 + 35759767
8 libsystem_pthread.dylib 0x00007fff65fe22eb _pthread_body + 126
9 libsystem_pthread.dylib 0x00007fff65fe5249 _pthread_start + 66
10 libsystem_pthread.dylib 0x00007fff65fe140d thread_start + 13
Thread 20:: TaskSchedulerSingleThreadForegroundBlocking1
0 libsystem_kernel.dylib 0x00007fff65f2321a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff65f23768 mach_msg + 60
2 QtWebEngineCore 0x000000011a58e2ad 0x1183e3000 + 35304109
3 QtWebEngineCore 0x000000011a58e1af 0x1183e3000 + 35303855
4 QtWebEngineCore 0x000000011a5a5c9a 0x1183e3000 + 35400858
5 QtWebEngineCore 0x000000011a5a65db 0x1183e3000 + 35403227
6 QtWebEngineCore 0x000000011a5a62a4 0x1183e3000 + 35402404
7 QtWebEngineCore 0x000000011a5fd697 0x1183e3000 + 35759767
8 libsystem_pthread.dylib 0x00007fff65fe22eb _pthread_body + 126
9 libsystem_pthread.dylib 0x00007fff65fe5249 _pthread_start + 66
10 libsystem_pthread.dylib 0x00007fff65fe140d thread_start + 13
Thread 21:: NetworkConfigWatcher
0 libsystem_kernel.dylib 0x00007fff65f2321a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff65f23768 mach_msg + 60
2 QtWebEngineCore 0x000000011a58e2ad 0x1183e3000 + 35304109
3 QtWebEngineCore 0x000000011a58e1af 0x1183e3000 + 35303855
4 QtWebEngineCore 0x000000011a541fdd 0x1183e3000 + 34992093
5 QtWebEngineCore 0x000000011a56b005 0x1183e3000 + 35160069
6 QtWebEngineCore 0x000000011a5bd93c 0x1183e3000 + 35498300
7 QtWebEngineCore 0x000000011a5fd697 0x1183e3000 + 35759767
8 libsystem_pthread.dylib 0x00007fff65fe22eb _pthread_body + 126
9 libsystem_pthread.dylib 0x00007fff65fe5249 _pthread_start + 66
10 libsystem_pthread.dylib 0x00007fff65fe140d thread_start + 13
Thread 22:: Dispatch queue: com.apple.root.user-interactive-qos
0 libsystem_kernel.dylib 0x00007fff65f2321a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff65f23768 mach_msg + 60
2 com.apple.QuartzCore 0x00007fff448d5e3e CA::Context::commit_transaction(CA::Transaction*) + 1998
3 com.apple.QuartzCore 0x00007fff448d4ea6 CA::Transaction::commit() + 596
4 com.apple.AppKit 0x00007fff3748e986 NSPerformVisuallyAtomicChange + 154
5 com.apple.AppKit 0x00007fff3773f99a __42-[NSAnimation(NSInternal) _runInNewThread]_block_invoke + 80
6 libdispatch.dylib 0x00007fff65da05f8 _dispatch_call_block_and_release + 12
7 libdispatch.dylib 0x00007fff65da163d _dispatch_client_callout + 8
8 libdispatch.dylib 0x00007fff65daf509 _dispatch_root_queue_drain + 657
9 libdispatch.dylib 0x00007fff65dafb46 _dispatch_worker_thread2 + 90
10 libsystem_pthread.dylib 0x00007fff65fe16b3 _pthread_wqthread + 583
11 libsystem_pthread.dylib 0x00007fff65fe13fd start_wqthread + 13
Thread 23:
0 libsystem_pthread.dylib 0x00007fff65fe13f0 start_wqthread + 0
Thread 24:
0 libsystem_pthread.dylib 0x00007fff65fe13f0 start_wqthread + 0
Thread 0 crashed with X86 Thread State (64-bit):
rax: 0x0000000000000000 rbx: 0x0000000113a3a5c0 rcx: 0x0000000109b66a48 rdx: 0x0000000000000000
rdi: 0x0000000000000307 rsi: 0x000000000000000b rbp: 0x0000000109b66a80 rsp: 0x0000000109b66a48
r8: 0x0000000109b66f48 r9: 0x72ea02285d902206 r10: 0x0000000113a3a66c r11: 0x0000000000000287
r12: 0x0000000000000307 r13: 0x0000000000000001 r14: 0x000000000000000b r15: 0x000000000000002d
rip: 0x00007fff65f292c2 rfl: 0x0000000000000286 cr2: 0x0000000109918fa4
Logical CPU: 0
Error Code: 0x02000148
Trap Number: 133
Binary Images:
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0x7fff65fea000 - 0x7fff65fedff7 libsystem_sandbox.dylib (851.270.3) /usr/lib/system/libsystem_sandbox.dylib
0x7fff65fee000 - 0x7fff65ff0ff3 libsystem_secinit.dylib (30.260.2) /usr/lib/system/libsystem_secinit.dylib
0x7fff65ff1000 - 0x7fff65ff8ff3 libsystem_symptoms.dylib (820.267.1) /usr/lib/system/libsystem_symptoms.dylib
0x7fff65ff9000 - 0x7fff6600eff7 libsystem_trace.dylib (906.260.2) /usr/lib/system/libsystem_trace.dylib
0x7fff66010000 - 0x7fff66015ffb libunwind.dylib (35.4) /usr/lib/system/libunwind.dylib
0x7fff66016000 - 0x7fff66045fff libxpc.dylib (1336.261.4) /usr/lib/system/libxpc.dylib
External Modification Summary:
Calls made by other processes targeting this process:
task_for_pid: 0
thread_create: 0
thread_set_state: 0
Calls made by this process:
task_for_pid: 0
thread_create: 0
thread_set_state: 0
Calls made by all processes on this machine:
task_for_pid: 25522
thread_create: 0
thread_set_state: 0
VM Region Summary:
ReadOnly portion of Libraries: Total=677.2M resident=0K(0%) swapped_out_or_unallocated=677.2M(100%)
Writable regions: Total=1.0G written=0K(0%) resident=0K(0%) swapped_out=0K(0%) unallocated=1.0G(100%)
VIRTUAL REGION
REGION TYPE SIZE COUNT (non-coalesced)
=========== ======= =======
Accelerate framework 384K 3
Activity Tracing 256K 1
CG backing stores 992K 2
CG image 196K 24
CoreAnimation 272K 16
CoreGraphics 8K 1
CoreImage 32K 4
CoreUI image data 2768K 27
CoreUI image file 196K 3
Foundation 4K 1
Kernel Alloc Once 8K 1
MALLOC 296.4M 140
MALLOC guard page 32K 8
MALLOC_LARGE (reserved) 384K 1 reserved VM address space (unallocated)
MALLOC_NANO (reserved) 384.0M 1 reserved VM address space (unallocated)
Memory Tag 242 12K 1
OpenGL GLSL 512K 6
PROTECTED_MEMORY 4K 1
STACK GUARD 96K 24
Stack 147.7M 25
Stack Guard 56.0M 1
VM_ALLOCATE 150.1M 178
VM_ALLOCATE (reserved) 32.0M 1 reserved VM address space (unallocated)
__DATA 43.0M 469
__FONT_DATA 4K 1
__GLSLBUILTINS 5176K 1
__LINKEDIT 246.7M 137
__TEXT 430.5M 447
__UNICODE 564K 1
mapped file 70.5M 34
shared memory 648K 14
=========== ======= =======
TOTAL 1.8G 1574
TOTAL, minus reserved VM space 1.4G 1574
Log:
> open /Users/meng/Desktop/startup.cxc
> alias reset view orient; view initial
> alias start tool show $1
> alias whereprefs info path user unversioned config
> alias previewts toolshed url https://cxtoolshed-
> preview.rbvi.ucsf.edu;toolshed reload available
> alias normalts toolshed url https://cxtoolshed.rbvi.ucsf.edu;toolshed reload
> available
executed startup.cxc
UCSF ChimeraX version: 1.1.dev202006250025 (2020-06-25)
© 2016-2020 Regents of the University of California. All rights reserved.
How to cite UCSF ChimeraX
OpenGL version: 4.1 INTEL-12.10.19
OpenGL renderer: Intel Iris Pro OpenGL Engine
OpenGL vendor: Intel Inc.Hardware:
Hardware Overview:
Model Name: MacBook Pro
Model Identifier: MacBookPro11,4
Processor Name: Intel Core i7
Processor Speed: 2.2 GHz
Number of Processors: 1
Total Number of Cores: 4
L2 Cache (per Core): 256 KB
L3 Cache: 6 MB
Hyper-Threading Technology: Enabled
Memory: 16 GB
Boot ROM Version: 198.0.0.0.0
SMC Version (system): 2.29f24
Software:
System Software Overview:
System Version: macOS 10.14.6 (18G5033)
Kernel Version: Darwin 18.7.0
Time since boot: 7:34
Graphics/Displays:
Intel Iris Pro:
Chipset Model: Intel Iris Pro
Type: GPU
Bus: Built-In
VRAM (Dynamic, Max): 1536 MB
Vendor: Intel
Device ID: 0x0d26
Revision ID: 0x0008
Metal: Supported, feature set macOS GPUFamily1 v4
Displays:
Color LCD:
Display Type: Built-In Retina LCD
Resolution: 2880 x 1800 Retina
Framebuffer Depth: 24-Bit Color (ARGB8888)
Main Display: Yes
Mirror: Off
Online: Yes
Rotation: Supported
Automatically Adjust Brightness: No
PyQt version: 5.12.3
Compiled Qt version: 5.12.4
Runtime Qt version: 5.12.8
Change History (2)
comment:1 by , 5 years ago
| Component: | Unassigned → Platform |
|---|---|
| Owner: | set to |
| Platform: | → all |
| Project: | → ChimeraX |
| Status: | new → accepted |
| Summary: | ChimeraX bug report submission → crash when closing Rotamers dialog |
comment:2 by , 5 years ago
| Resolution: | → can't reproduce |
|---|---|
| Status: | accepted → closed |
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Qt must have gotten into a weird state with that docked / not docked Rotamers dialog. Our code does call removeDockWidget() when the dialog is closed, which blew up because of the weird Qt state. This would have to be fixed by Qt.