Crash with trashed stack
The following bug report has been submitted:
Platform: Darwin-19.4.0-x86_64-i386-64bit
ChimeraX Version: 1.0 (2020-06-04 23:15:07 UTC)
Description
Last time you used ChimeraX it crashed.
Please describe steps that led to the crash here.
Process: ChimeraX [49861]
Path: /private/var/folders/*/ChimeraX-1.0.app/Contents/MacOS/ChimeraX
Identifier: edu.ucsf.cgl.ChimeraX
Version: 1.0.0 (1.0.0.0)
Code Type: X86-64 (Native)
Parent Process: ??? [1]
Responsible: ChimeraX [49861]
User ID: 501
Date/Time: 2020-06-18 13:31:18.499 -0400
OS Version: Mac OS X 10.15.4 (19E287)
Report Version: 12
Anonymous UUID: F2CEADA6-1655-5604-264F-E39B64BDCDA4
Sleep/Wake UUID: 9E8232E0-8DD0-40B4-ABFA-7961F17FB1B4
Time Awake Since Boot: 540000 seconds
Time Since Wake: 850 seconds
System Integrity Protection: enabled
Crashed Thread: 0 CrBrowserMain
Exception Type: EXC_BAD_ACCESS (SIGBUS)
Exception Codes: KERN_MEMORY_ERROR at 0x000000011e997080
Exception Note: EXC_CORPSE_NOTIFY
VM Regions Near 0x11e997080:
shared memory 000000011e958000-000000011e960000 [ 32K] r--/r-- SM=SHM
--> mapped file 000000011e960000-000000011eac8000 [ 1440K] r-x/rwx SM=COW Object_id=586e2539
mapped file 000000011eac8000-000000011eae0000 [ 96K] rw-/rwx SM=COW Object_id=46d37839
Thread 0 Crashed:: CrBrowserMain
0 ??? 0x00007fff6f28e33a 0 + 140735058338618
1 ??? 0x00007fff6f1a593e 0 + 140735057385790
2 ??? 0x00007fff6f33f5fd 0 + 140735059064317
3 ChimeraX 000000000000000000 0 + 0
4 ??? 0x00007fff351ff427 0 + 140734084674599
5 ??? 0x00007fff351fecbd 0 + 140734084672701
6 ??? 0x00007fff351fdffe 0 + 140734084669438
7 ??? 0x00007fff33e31abd 0 + 140734063909565
8 ??? 0x00007fff33e317d5 0 + 140734063908821
9 ??? 0x00007fff33e31579 0 + 140734063908217
10 ??? 0x00007fff3247cc99 0 + 140734036954265
11 ??? 0x00007fff3247b4e0 0 + 140734036948192
12 ??? 0x00007fff3246d1ee 0 + 140734036890094
13 ??? 0x000000011e995de3 0 + 4808334819
14 ??? 0x0000000114b0eadf 0 + 4642106079
15 ??? 0x0000000114b13ad2 0 + 4642126546
16 ??? 0x0000000113ad67d2 0 + 4625098706
17 ??? 0x000000010aa29392 0 + 4473394066
18 ??? 0x000000010aa288b9 0 + 4473391289
19 ??? 0x000000010aafdaf0 0 + 4474264304
20 ??? 0x000000010aafa7a7 0 + 4474251175
21 ??? 0x000000010aa28d61 0 + 4473392481
22 ??? 0x000000010aafdb64 0 + 4474264420
23 ??? 0x000000010aafa7a7 0 + 4474251175
24 ??? 0x000000010aafe9bc 0 + 4474268092
25 ??? 0x000000010aa28879 0 + 4473391225
26 ??? 0x000000010aafdb64 0 + 4474264420
27 ??? 0x000000010aafa83e 0 + 4474251326
28 ??? 0x000000010aafe9bc 0 + 4474268092
29 ??? 0x000000010aaf3f40 0 + 4474224448
30 ??? 0x000000010aaf14d7 0 + 4474213591
31 ??? 0x000000010aa29545 0 + 4473394501
32 ??? 0x000000010aa288b9 0 + 4473391289
33 ??? 0x000000010aafdaf0 0 + 4474264304
34 ??? 0x000000010aafa83e 0 + 4474251326
35 ??? 0x000000010aafe9bc 0 + 4474268092
36 ??? 0x000000010aa28879 0 + 4473391225
37 ??? 0x000000010aafdb64 0 + 4474264420
38 ??? 0x000000010aafa83e 0 + 4474251326
39 ??? 0x000000010aafe9bc 0 + 4474268092
40 ??? 0x000000010aa28377 0 + 4473389943
41 ??? 0x000000010ab58a83 0 + 4474636931
42 ??? 0x000000010ab57b6c 0 + 4474633068
43 ??? 0x000000010ab56453 0 + 4474627155
44 ??? 0x000000010a9f7dc8 0 + 4473191880
45 ??? 0x00007fff6f146cc9 0 + 140735056997577
Thread 1:
0 ??? 0x00007fff6f28a882 0 + 140735058323586
1 ??? 0x000000010c533c3b 0 + 4501748795
2 ??? 0x00007fff6f34b109 0 + 140735059112201
3 ??? 0x00007fff6f346b8b 0 + 140735059094411
Thread 2:: com.apple.NSEventThread
0 ??? 0x00007fff6f287dfa 0 + 140735058312698
1 ??? 0x00007fff6f288170 0 + 140735058313584
2 ??? 0x00007fff352000b5 0 + 140734084677813
3 ??? 0x00007fff351feb82 0 + 140734084672386
4 ??? 0x00007fff351fdffe 0 + 140734084669438
5 ??? 0x00007fff3261e5b4 0 + 140734038664628
6 ??? 0x00007fff6f34b109 0 + 140735059112201
7 ??? 0x00007fff6f346b8b 0 + 140735059094411
Thread 3:: NetworkConfigWatcher
0 ??? 0x00007fff6f287dfa 0 + 140735058312698
1 ??? 0x00007fff6f288170 0 + 140735058313584
2 ??? 0x00000001194c22ad 0 + 4719387309
3 ??? 0x00000001194c21af 0 + 4719387055
4 ??? 0x0000000119475fdd 0 + 4719075293
5 ??? 0x000000011949f005 0 + 4719243269
6 ??? 0x00000001194f193c 0 + 4719581500
7 ??? 0x0000000119531697 0 + 4719842967
8 ??? 0x00007fff6f34b109 0 + 140735059112201
9 ??? 0x00007fff6f346b8b 0 + 140735059094411
Thread 4:: DnsConfigService
0 ??? 0x00007fff6f28c766 0 + 140735058331494
1 ??? 0x0000000119780c3d 0 + 4722265149
2 ??? 0x0000000119537c5c 0 + 4719869020
3 ??? 0x000000011949f005 0 + 4719243269
4 ??? 0x00000001194f193c 0 + 4719581500
5 ??? 0x0000000119531697 0 + 4719842967
6 ??? 0x00007fff6f34b109 0 + 140735059112201
7 ??? 0x00007fff6f346b8b 0 + 140735059094411
Thread 5:: TaskSchedulerServiceThread
0 ??? 0x00007fff6f28c766 0 + 140735058331494
1 ??? 0x0000000119780c3d 0 + 4722265149
2 ??? 0x0000000119537c44 0 + 4719868996
3 ??? 0x000000011949f005 0 + 4719243269
4 ??? 0x00000001194e09f4 0 + 4719512052
5 ??? 0x00000001194f193c 0 + 4719581500
6 ??? 0x0000000119531697 0 + 4719842967
7 ??? 0x00007fff6f34b109 0 + 140735059112201
8 ??? 0x00007fff6f346b8b 0 + 140735059094411
Thread 6:: TaskSchedulerForegroundWorker
0 ??? 0x00007fff6f287dfa 0 + 140735058312698
1 ??? 0x00007fff6f288170 0 + 140735058313584
2 ??? 0x00000001194c22ad 0 + 4719387309
3 ??? 0x00000001194c23a1 0 + 4719387553
4 ??? 0x00000001194d9ca8 0 + 4719484072
5 ??? 0x00000001194da5db 0 + 4719486427
6 ??? 0x00000001194da244 0 + 4719485508
7 ??? 0x0000000119531697 0 + 4719842967
8 ??? 0x00007fff6f34b109 0 + 140735059112201
9 ??? 0x00007fff6f346b8b 0 + 140735059094411
Thread 7:: TaskSchedulerForegroundBlockingWorker
0 ??? 0x00007fff6f287dfa 0 + 140735058312698
1 ??? 0x00007fff6f288170 0 + 140735058313584
2 ??? 0x00000001194c22ad 0 + 4719387309
3 ??? 0x00000001194c23a1 0 + 4719387553
4 ??? 0x00000001194d9ca8 0 + 4719484072
5 ??? 0x00000001194da5db 0 + 4719486427
6 ??? 0x00000001194da244 0 + 4719485508
7 ??? 0x0000000119531697 0 + 4719842967
8 ??? 0x00007fff6f34b109 0 + 140735059112201
9 ??? 0x00007fff6f346b8b 0 + 140735059094411
Thread 8:: TaskSchedulerForegroundBlockingWorker
0 ??? 0x00007fff6f287dfa 0 + 140735058312698
1 ??? 0x00007fff6f288170 0 + 140735058313584
2 ??? 0x00000001194c22ad 0 + 4719387309
3 ??? 0x00000001194c23a1 0 + 4719387553
4 ??? 0x00000001194d9ca8 0 + 4719484072
5 ??? 0x00000001194da5db 0 + 4719486427
6 ??? 0x00000001194da244 0 + 4719485508
7 ??? 0x0000000119531697 0 + 4719842967
8 ??? 0x00007fff6f34b109 0 + 140735059112201
9 ??? 0x00007fff6f346b8b 0 + 140735059094411
Thread 9:: TaskSchedulerBackgroundWorker
0 ??? 0x00007fff6f287dfa 0 + 140735058312698
1 ??? 0x00007fff6f288170 0 + 140735058313584
2 ??? 0x00000001194c22ad 0 + 4719387309
3 ??? 0x00000001194c23a1 0 + 4719387553
4 ??? 0x00000001194d9ca8 0 + 4719484072
5 ??? 0x00000001194da5db 0 + 4719486427
6 ??? 0x00000001194da1b4 0 + 4719485364
7 ??? 0x0000000119531697 0 + 4719842967
8 ??? 0x00007fff6f34b109 0 + 140735059112201
9 ??? 0x00007fff6f346b8b 0 + 140735059094411
Thread 10:: TaskSchedulerBackgroundBlockingWorker
0 ??? 0x00007fff6f287dfa 0 + 140735058312698
1 ??? 0x00007fff6f288170 0 + 140735058313584
2 ??? 0x00000001194c22ad 0 + 4719387309
3 ??? 0x00000001194c23a1 0 + 4719387553
4 ??? 0x00000001194d9ca8 0 + 4719484072
5 ??? 0x00000001194da5db 0 + 4719486427
6 ??? 0x00000001194da1b4 0 + 4719485364
7 ??? 0x0000000119531697 0 + 4719842967
8 ??? 0x00007fff6f34b109 0 + 140735059112201
9 ??? 0x00007fff6f346b8b 0 + 140735059094411
Thread 11:: Chrome_IOThread
0 ??? 0x00007fff6f28c766 0 + 140735058331494
1 ??? 0x0000000119780c3d 0 + 4722265149
2 ??? 0x0000000119537c44 0 + 4719868996
3 ??? 0x000000011949f005 0 + 4719243269
4 ??? 0x0000000118e04fa4 0 + 4712320932
5 ??? 0x00000001194f193c 0 + 4719581500
6 ??? 0x0000000119531697 0 + 4719842967
7 ??? 0x00007fff6f34b109 0 + 140735059112201
8 ??? 0x00007fff6f346b8b 0 + 140735059094411
Thread 12:: TaskSchedulerSingleThreadSharedBackgroundBlocking0
0 ??? 0x00007fff6f287dfa 0 + 140735058312698
1 ??? 0x00007fff6f288170 0 + 140735058313584
2 ??? 0x00000001194c22ad 0 + 4719387309
3 ??? 0x00000001194c21af 0 + 4719387055
4 ??? 0x00000001194d9c9a 0 + 4719484058
5 ??? 0x00000001194da33f 0 + 4719485759
6 ??? 0x00000001194da1e4 0 + 4719485412
7 ??? 0x0000000119531697 0 + 4719842967
8 ??? 0x00007fff6f34b109 0 + 140735059112201
9 ??? 0x00007fff6f346b8b 0 + 140735059094411
Thread 13:: CompositorTileWorker1/73219
0 ??? 0x00007fff6f28a882 0 + 140735058323586
1 ??? 0x000000011952ff28 0 + 4719836968
2 ??? 0x000000011a4b8628 0 + 4736124456
3 ??? 0x00000001194f0614 0 + 4719576596
4 ??? 0x0000000119531697 0 + 4719842967
5 ??? 0x00007fff6f34b109 0 + 140735059112201
6 ??? 0x00007fff6f346b8b 0 + 140735059094411
Thread 14:: AudioThread
0 ??? 0x00007fff6f287dfa 0 + 140735058312698
1 ??? 0x00007fff6f288170 0 + 140735058313584
2 ??? 0x00000001194c22ad 0 + 4719387309
3 ??? 0x00000001194c21af 0 + 4719387055
4 ??? 0x0000000119475fdd 0 + 4719075293
5 ??? 0x000000011949f005 0 + 4719243269
6 ??? 0x00000001194f193c 0 + 4719581500
7 ??? 0x0000000119531697 0 + 4719842967
8 ??? 0x00007fff6f34b109 0 + 140735059112201
9 ??? 0x00007fff6f346b8b 0 + 140735059094411
Thread 15:: Chrome_InProcGpuThread
0 ??? 0x00007fff6f287dfa 0 + 140735058312698
1 ??? 0x00007fff6f288170 0 + 140735058313584
2 ??? 0x00000001194c22ad 0 + 4719387309
3 ??? 0x0000000119475fd2 0 + 4719075282
4 ??? 0x000000011949f005 0 + 4719243269
5 ??? 0x00000001194f193c 0 + 4719581500
6 ??? 0x0000000119531697 0 + 4719842967
7 ??? 0x00007fff6f34b109 0 + 140735059112201
8 ??? 0x00007fff6f346b8b 0 + 140735059094411
Thread 16:: Chrome_ChildIOThread
0 ??? 0x00007fff6f28c766 0 + 140735058331494
1 ??? 0x0000000119780c3d 0 + 4722265149
2 ??? 0x0000000119537c5c 0 + 4719869020
3 ??? 0x000000011949f005 0 + 4719243269
4 ??? 0x00000001194f193c 0 + 4719581500
5 ??? 0x0000000119531697 0 + 4719842967
6 ??? 0x00007fff6f34b109 0 + 140735059112201
7 ??? 0x00007fff6f346b8b 0 + 140735059094411
Thread 17:: NetworkConfigWatcher
0 ??? 0x00007fff6f287dfa 0 + 140735058312698
1 ??? 0x00007fff6f288170 0 + 140735058313584
2 ??? 0x00000001194c22ad 0 + 4719387309
3 ??? 0x00000001194c21af 0 + 4719387055
4 ??? 0x0000000119475fdd 0 + 4719075293
5 ??? 0x000000011949f005 0 + 4719243269
6 ??? 0x00000001194f193c 0 + 4719581500
7 ??? 0x0000000119531697 0 + 4719842967
8 ??? 0x00007fff6f34b109 0 + 140735059112201
9 ??? 0x00007fff6f346b8b 0 + 140735059094411
Thread 18:: TaskSchedulerSingleThreadForegroundBlocking1
0 ??? 0x00007fff6f287dfa 0 + 140735058312698
1 ??? 0x00007fff6f288170 0 + 140735058313584
2 ??? 0x00000001194c22ad 0 + 4719387309
3 ??? 0x00000001194c21af 0 + 4719387055
4 ??? 0x00000001194d9c9a 0 + 4719484058
5 ??? 0x00000001194da5db 0 + 4719486427
6 ??? 0x00000001194da2a4 0 + 4719485604
7 ??? 0x0000000119531697 0 + 4719842967
8 ??? 0x00007fff6f34b109 0 + 140735059112201
9 ??? 0x00007fff6f346b8b 0 + 140735059094411
Thread 19:: NetworkConfigWatcher
0 ??? 0x00007fff6f287dfa 0 + 140735058312698
1 ??? 0x00007fff6f288170 0 + 140735058313584
2 ??? 0x00000001194c22ad 0 + 4719387309
3 ??? 0x00000001194c21af 0 + 4719387055
4 ??? 0x0000000119475fdd 0 + 4719075293
5 ??? 0x000000011949f005 0 + 4719243269
6 ??? 0x00000001194f193c 0 + 4719581500
7 ??? 0x0000000119531697 0 + 4719842967
8 ??? 0x00007fff6f34b109 0 + 140735059112201
9 ??? 0x00007fff6f346b8b 0 + 140735059094411
Thread 20:
0 ??? 0x00007fff6f346b68 0 + 140735059094376
Thread 21:
0 ??? 0x00007fff6f346b68 0 + 140735059094376
Thread 0 crashed with X86 Thread State (64-bit):
rax: 0x0000000000000000 rbx: 0x000000011133bdc0 rcx: 0x000000010aea9a58 rdx: 0x0000000000000000
rdi: 0x0000000000000307 rsi: 0x000000000000000a rbp: 0x000000010aea9a80 rsp: 0x000000010aea9a58
r8: 0x000000010aea9f48 r9: 0x25b11d6ac4ab263f r10: 0x000000011133bdc0 r11: 0x0000000000000246
r12: 0x0000000000000307 r13: 0x0000000000000040 r14: 0x000000000000000a r15: 0x0000000000000016
rip: 0x00007fff6f28e33a rfl: 0x0000000000000246 cr2: 0x000000010ac63f04
Logical CPU: 0
Error Code: 0x02000148
Trap Number: 133
Binary Images:
0 - 0xffffffffffffffff +ChimeraX (???) /private/var/folders/*/ChimeraX-1.0.app/Contents/MacOS/ChimeraX
0x111271000 - 0x111302eff dyld (750.5) /usr/lib/dyld
External Modification Summary:
Calls made by other processes targeting this process:
task_for_pid: 2
thread_create: 0
thread_set_state: 0
Calls made by this process:
task_for_pid: 0
thread_create: 0
thread_set_state: 0
Calls made by all processes on this machine:
task_for_pid: 427654
thread_create: 0
thread_set_state: 0
VM Region Summary:
ReadOnly portion of Libraries: Total=808K resident=0K(0%) swapped_out_or_unallocated=808K(100%)
Writable regions: Total=834.8M written=0K(0%) resident=0K(0%) swapped_out=0K(0%) unallocated=834.8M(100%)
VIRTUAL REGION
REGION TYPE SIZE COUNT (non-coalesced)
=========== ======= =======
Accelerate framework 128K 1
Activity Tracing 256K 1
CG backing stores 880K 2
CG image 144K 15
CoreAnimation 228K 20
CoreGraphics 8K 1
CoreImage 24K 2
CoreUI image data 2148K 18
Foundation 4K 1
Kernel Alloc Once 8K 1
MALLOC 229.0M 302
MALLOC guard page 32K 7
MALLOC_LARGE (reserved) 384K 1 reserved VM address space (unallocated)
MALLOC_NANO (reserved) 384.0M 1 reserved VM address space (unallocated)
Memory Tag 242 12K 1
OpenGL GLSL 512K 6
STACK GUARD 84K 21
Stack 146.2M 22
Stack Guard 56.0M 1
VM_ALLOCATE 39.8M 214
VM_ALLOCATE (reserved) 32.0M 1 reserved VM address space (unallocated)
__DATA 216K 2
__DATA_CONST 20K 1
__LINKEDIT 224K 1
__TEXT 584K 1
dylib 1692K 24
dylib (reserved) 32K 5 reserved VM address space (unallocated)
mapped file 324.4M 424
shared memory 652K 18
=========== ======= =======
TOTAL 1.2G 1115
TOTAL, minus reserved VM space 803.1M 1115
Log:
UCSF ChimeraX version: 1.0 (2020-06-04)
© 2016-2020 Regents of the University of California. All rights reserved.
How to cite UCSF ChimeraX
OpenGL version: 4.1 INTEL-14.5.22
OpenGL renderer: Intel(R) Iris(TM) Graphics 6100
OpenGL vendor: Intel Inc.Hardware:
Hardware Overview:
Model Name: MacBook Pro
Model Identifier: MacBookPro12,1
Processor Name: Dual-Core Intel Core i5
Processor Speed: 2.7 GHz
Number of Processors: 1
Total Number of Cores: 2
L2 Cache (per Core): 256 KB
L3 Cache: 3 MB
Hyper-Threading Technology: Enabled
Memory: 8 GB
Boot ROM Version: 190.0.0.0.0
SMC Version (system): 2.28f7
Software:
System Software Overview:
System Version: macOS 10.15.4 (19E287)
Kernel Version: Darwin 19.4.0
Time since boot: 28 days 20:33
Graphics/Displays:
Intel Iris Graphics 6100:
Chipset Model: Intel Iris Graphics 6100
Type: GPU
Bus: Built-In
VRAM (Dynamic, Max): 1536 MB
Vendor: Intel
Device ID: 0x162b
Revision ID: 0x0009
Metal: Supported, feature set macOS GPUFamily1 v4
Displays:
Color LCD:
Display Type: Built-In Retina LCD
Resolution: 2560 x 1600 Retina
Framebuffer Depth: 24-Bit Color (ARGB8888)
Main Display: Yes
Mirror: Off
Online: Yes
Automatically Adjust Brightness: No
Connection Type: Internal
PyQt version: 5.12.3
Compiled Qt version: 5.12.4
Runtime Qt version: 5.12.8
![[ChimeraX Issue Tracking System]](/trac/ChimeraX/chrome/site/ChimeraX-icon.svg){kind=icon}
Trashed? Didn't you see the line
3 ChimeraX 000000000000000000 0 + 0