Opened 5 years ago
Closed 5 years ago
#3405 closed enhancement (fixed)
Orderable TmplAtom
Reported by: | Tristan Croll | Owned by: | pett |
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Priority: | normal | Milestone: | |
Component: | Core | Version: | |
Keywords: | Cc: | ||
Blocked By: | Blocking: | ||
Notify when closed: | Platform: | all | |
Project: | ChimeraX |
Description
The following bug report has been submitted: Platform: Linux-3.10.0-1062.9.1.el7.x86_64-x86_64-with-centos-7.7.1908-Core ChimeraX Version: 1.0 (2020-06-04 23:15:07 UTC) Description Minor API-related issue, but it would be good if `TmplAtom` had some form of `__lt__` method defined to make it orderable. I'm not sure if it particularly matters how (by name?), but orderability is required for some algorithms (e.g. `networkx.isomorphism.ISMAGS` for finding the maximal isomorphous subgraph between a residue and its template). In this case I can trivially work around it by switching the order of arguments since `Atom` *is* orderable, so there's absolutely no urgency here. Log: UCSF ChimeraX version: 1.0 (2020-06-04) © 2016-2020 Regents of the University of California. All rights reserved. How to cite UCSF ChimeraX OpenGL version: 3.3.0 NVIDIA 440.33.01 OpenGL renderer: TITAN Xp/PCIe/SSE2 OpenGL vendor: NVIDIA Corporation Manufacturer: Dell Inc. Model: Precision T5600 OS: CentOS Linux 7 Core Architecture: 64bit ELF CPU: 32 Intel(R) Xeon(R) CPU E5-2687W 0 @ 3.10GHz Cache Size: 20480 KB Memory: total used free shared buff/cache available Mem: 62G 5.0G 46G 181M 10G 57G Swap: 4.9G 0B 4.9G Graphics: 03:00.0 VGA compatible controller [0300]: NVIDIA Corporation GP102 [TITAN Xp] [10de:1b02] (rev a1) Subsystem: NVIDIA Corporation Device [10de:11df] Kernel driver in use: nvidia PyQt version: 5.12.3 Compiled Qt version: 5.12.4 Runtime Qt version: 5.12.8
Change History (5)
comment:2 by , 5 years ago
Component: | Unassigned → Core |
---|---|
Owner: | set to |
Platform: | → all |
Project: | → ChimeraX |
Status: | new → accepted |
Summary: | ChimeraX bug report submission → Orderable TmplAtom |
Type: | defect → enhancement |
follow-up: 4 comment:4 by , 5 years ago
chimerax.atomic.cytmpl.TmplAtom On 2020-06-16 17:40, ChimeraX wrote:
comment:5 by , 5 years ago
Resolution: | → fixed |
---|---|
Status: | accepted → closed |
TmplAtom now sorts on name. In the next daily build.
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