Opened 5 years ago
Closed 5 years ago
#3398 closed defect (fixed)
debugging output logged
Reported by: | Owned by: | Eric Pettersen | |
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Priority: | normal | Milestone: | |
Component: | Input/Output | Version: | |
Keywords: | Cc: | ||
Blocked By: | Blocking: | ||
Notify when closed: | Platform: | all | |
Project: | ChimeraX |
Description
The following bug report has been submitted: Platform: Windows-10-10.0.18362 ChimeraX Version: 1.1.dev202006141623 (2020-06-14 16:23:47 UTC) Description Opening a file writes some debugging info to the log "open names ..." Log: UCSF ChimeraX version: 1.1.dev202006141623 (2020-06-14) © 2016-2020 Regents of the University of California. All rights reserved. How to cite UCSF ChimeraX > open 4hus format mmcif fromDatabase pdb 4hus title: Crystal structure of streptogramin group A antibiotic acetyltransferase VatA from Staphylococcus aureus in complex with virginiamycin M1 [more info...] Chain information for 4hus #1 --- Chain | Description A B C | Virginiamycin A acetyltransferase Non-standard residues in 4hus #1 --- CL — chloride ion EDO — 1,2-ethanediol (ethylene glycol) NA — sodium ion PEG — di(hydroxyethyl)ether PGE — triethylene glycol SO4 — sulfate ion VIR — virginiamycin M1 open names [format _one of 'aln', 'amira', 'apbs', 'bild', 'brix', 'ccd', 'ccp4', 'cellpack', 'cmap', 'cmd', 'collada', 'compiled python', 'cube', 'dcd', 'delphi', 'dicom', 'dock', 'dsn6', 'dv', 'emanhdf', 'fasta', 'fsc', 'gltf', 'gopenmol', 'hdf', 'hssp', 'html', 'ihm', 'images', 'imagic', 'imodmap', 'ims', 'macmolplt', 'markers', 'mmcif', 'mmtf', 'mol2', 'mrc', 'msf', 'netcdf', 'obj', 'pdb', 'pdbqt', 'pfam', 'pif', 'pir', 'priism', 'profec', 'pseudobonds', 'python', 'rsf', 'sdf', 'segger', 'session', 'situs', 'smiles', 'spider', 'stl', 'stockholm', 'storm', 'tom_em', 'trr', 'uhbd', 'uniprot', 'vtk', 'web fetch', 'xplor', or 'xtc'_] [fromDatabase _one of 'ccd', 'cellPACK', 'eds', 'edsdiff', 'emdb', 'ftp', 'help', 'http', 'https', 'pdb', 'pdbdev', 'pdbe', 'pdbj', 'pubchem', 'smiles', or 'uniprot'_] [ignoreCache _true or false_] [name _a text string_] [atomic _true or false_] [autoStyle _true or false_] [combineSymAtoms _true or false_] [coordsets _true or false_] [logInfo _true or false_] [maxModels _an integer_] [oversampling _a number_] [structureFactors _true or false_] -- read and display data names: file names to open; a name of 'browse' will bring up a file browser OpenGL version: 3.3.0 NVIDIA 442.19 OpenGL renderer: GeForce GTX 1080 Ti/PCIe/SSE2 OpenGL vendor: NVIDIA Corporation Manufacturer: Gigabyte Technology Co., Ltd. Model: Z270X-Gaming K7 OS: Microsoft Windows 10 Home (Build 18362) Memory: 17,129,693,184 MaxProcessMemory: 137,438,953,344 CPU: 8 Intel(R) Core(TM) i7-7700K CPU @ 4.20GHz" PyQt version: 5.12.3 Compiled Qt version: 5.12.4 Runtime Qt version: 5.12.8
Change History (2)
comment:1 by , 5 years ago
Component: | Unassigned → Input/Output |
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Owner: | set to |
Platform: | → all |
Project: | → ChimeraX |
Status: | new → accepted |
Summary: | ChimeraX bug report submission → debugging output logged |
comment:2 by , 5 years ago
Resolution: | → fixed |
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Status: | accepted → closed |
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