Opened 5 years ago

Closed 5 years ago

#3391 closed enhancement (fixed)

"defattr" format for 'save' command

Reported by: martti.tolvanen@… Owned by: Eric Pettersen
Priority: moderate Milestone:
Component: Structure Analysis Version:
Keywords: Cc: Elaine Meng
Blocked By: Blocking:
Notify when closed: Platform: all
Project: ChimeraX

Description (last modified by Eric Pettersen)

Some of the options analogous to "color byattr"

Change History (4)

comment:1 by Eric Pettersen, 5 years ago

Description: modified (diff)
Summary: 'saveFile' option for 'info' commands"defattr" format for 'save' command

After discussion with Elaine, decided that using "save" command was easier to find, more generically useful, and more focused on attribute saving than adding 'saveFile' to the 'info' command.

in reply to:  2 ; comment:2 by martti.tolvanen@…, 5 years ago

Thank you Eric and Elaine, 

I have seen that most (if not all) of my suggestions and bug reports, from last spring, have been addressed over the last few months, so now it seems I can use ChimeraX for creating the parallel analyses of surface accessibility, hydrophobicity and conservation in PDB models of multiple homologous proteins as I have done in Chimera 1.14. I have another Structural Bioinformatics course coming up in November, so I may have some new suggestions to you soon!

Enjoy your work on Friday and have a nice weekend! My time zone of EET is 10h ahead of California, so I'm about to call it a day here :-)

Cheers,
-Martti

-----Original Message-----
From: ChimeraX [mailto:ChimeraX-bugs-admin@cgl.ucsf.edu] 
Sent: 9. lokakuutata 2020 2:27
Cc: Martti Tolvanen <martti.tolvanen@utu.fi>; meng@cgl.ucsf.edu; pett@cgl.ucsf.edu
Subject: Re: [ChimeraX] #3391: "defattr" format for 'save' command (was: 'saveFile' option for 'info' commands)

#3391: "defattr" format for 'save' command
-----------------------------------------+----------------------------
          Reporter:  martti.tolvanen@…   |      Owner:  Eric Pettersen
              Type:  enhancement         |     Status:  assigned
          Priority:  moderate            |  Milestone:
         Component:  Structure Analysis  |    Version:
        Resolution:                      |   Keywords:
        Blocked By:                      |   Blocking:
Notify when closed:                      |   Platform:  all
           Project:  ChimeraX            |
-----------------------------------------+----------------------------

Old description:


New description:

 Some of the options analogous to "color byattr"

--

Comment (by Eric Pettersen):

 After discussion with Elaine, decided that using "save" command was easier
 to find, more generically useful, and more focused on attribute saving
 than adding 'saveFile' to the 'info' command.

--
Ticket URL: <https://plato.cgl.ucsf.edu/trac/ChimeraX/ticket/3391#comment:1>
ChimeraX <http://www.rbvi.ucsf.edu/chimerax/>
ChimeraX Issue Tracker

comment:3 by Eric Pettersen, 5 years ago

Okay, tomorrow's build will allow "save blah.defattr attrName idatm_type".

comment:4 by Eric Pettersen, 5 years ago

Resolution: fixed
Status: assignedclosed
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