Opened 5 years ago
Last modified 5 years ago
#3329 assigned defect
Changing 2D label model id can cause problems
Reported by: | Owned by: | Tom Goddard | |
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Priority: | normal | Milestone: | |
Component: | Core | Version: | |
Keywords: | Cc: | ||
Blocked By: | Blocking: | ||
Notify when closed: | Platform: | all | |
Project: | ChimeraX |
Description
The following bug report has been submitted: Platform: Darwin-19.4.0-x86_64-i386-64bit ChimeraX Version: 1.0rc202005271742 (2020-05-27 17:42:24 UTC) Description Changing the id of the 2D labels model makes it a child of the scene_root_model instead of its own parent-less model. This could mess up rendering the 3D models or bounds calculations although I did not observe problems in this test. Log: UCSF ChimeraX version: 1.0rc202005270116 (2020-05-27) © 2016-2020 Regents of the University of California. All rights reserved. > open /Users/goddard/ucsf/cx-1.0/src/core/test.cxs format session Log from Wed May 27 17:13:05 2020 Startup Messages --- warnings | QWebEngineUrlScheme::registerScheme: Scheme "cxcmd" already registered QWebEngineUrlScheme::registerScheme: Scheme "help" already registered QWebEngineUrlScheme::registerScheme: Scheme "cxcmd" already registered QWebEngineUrlScheme::registerScheme: Scheme "help" already registered QWebEngineUrlScheme::registerScheme: Scheme "cxcmd" already registered 8 messages similar to the above omitted Replacing file-saver for 'DCD coordinates' from MDcrds bundle with that from MD-crds bundle Replacing opener for 'Gromacs full-precision coordinates' from MDcrds bundle with that from MD-crds bundle Replacing opener for 'Gromacs compressed coordinates' from MDcrds bundle with that from MD-crds bundle Replacing opener for 'DCD coordinates' from MDcrds bundle with that from MD- crds bundle notes | Replacing data format 'Gromacs full-precision coordinates' as defined by ChimeraX-MDcrds bundle with definition from ChimeraX-MD-crds bundle Replacing data format 'Gromacs compressed coordinates' as defined by ChimeraX- MDcrds bundle with definition from ChimeraX-MD-crds bundle Replacing data format 'DCD coordinates' as defined by ChimeraX-MDcrds bundle with definition from ChimeraX-MD-crds bundle UCSF ChimeraX version: 1.0rc202005270116 (2020-05-27) © 2016-2020 Regents of the University of California. All rights reserved. How to cite UCSF ChimeraX > open 5ip2 format mmcif fromDatabase pdb 5ip2 title: Tomato spotted wilt tospovirus nucleocapsid protein-ssRNA complex [more info...] Chain information for 5ip2 #1 --- Chain | Description A B C | Nucleoprotein D F | RNA (5'-D(P*up*up*U)-3') E | RNA (5'-R(P*up*up*up*up*up*up*up*up*up*up*up*up*up*up*up*up*up*up*U)-3') > 2dlabels text Hello > rename #2 id #3 > 2dlabels text Bye-bye ypos .8 > save test.cxs opened ChimeraX session > ui tool show Shell > view > rename #2 id #3 > rename #3 id #5 > view > view > view OpenGL version: 4.1 ATI-3.8.24 OpenGL renderer: AMD Radeon Pro Vega 20 OpenGL Engine OpenGL vendor: ATI Technologies Inc.Hardware: Hardware Overview: Model Name: MacBook Pro Model Identifier: MacBookPro15,3 Processor Name: 8-Core Intel Core i9 Processor Speed: 2.4 GHz Number of Processors: 1 Total Number of Cores: 8 L2 Cache (per Core): 256 KB L3 Cache: 16 MB Hyper-Threading Technology: Enabled Memory: 32 GB Boot ROM Version: 1037.100.362.0.0 (iBridge: 17.16.14281.0.0,0) Software: System Software Overview: System Version: macOS 10.15.4 (19E287) Kernel Version: Darwin 19.4.0 Time since boot: 18 days 20:53 Graphics/Displays: Intel UHD Graphics 630: Chipset Model: Intel UHD Graphics 630 Type: GPU Bus: Built-In VRAM (Dynamic, Max): 1536 MB Vendor: Intel Device ID: 0x3e9b Revision ID: 0x0002 Automatic Graphics Switching: Supported gMux Version: 5.0.0 Metal: Supported, feature set macOS GPUFamily2 v1 Radeon Pro Vega 20: Chipset Model: Radeon Pro Vega 20 Type: GPU Bus: PCIe PCIe Lane Width: x8 VRAM (Total): 4 GB Vendor: AMD (0x1002) Device ID: 0x69af Revision ID: 0x00c0 ROM Revision: 113-D2060I-087 VBIOS Version: 113-D20601MA0T-016 Option ROM Version: 113-D20601MA0T-016 EFI Driver Version: 01.01.087 Automatic Graphics Switching: Supported gMux Version: 5.0.0 Metal: Supported, feature set macOS GPUFamily2 v1 Displays: Color LCD: Display Type: Built-In Retina LCD Resolution: 2880 x 1800 Retina Framebuffer Depth: 24-Bit Color (ARGB8888) Main Display: Yes Mirror: Off Online: Yes Automatically Adjust Brightness: No Connection Type: Internal PyQt version: 5.12.3 Compiled Qt version: 5.12.4 Runtime Qt version: 5.12.8
Change History (1)
comment:1 by , 5 years ago
Component: | Unassigned → Core |
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Owner: | set to |
Platform: | → all |
Project: | → ChimeraX |
Status: | new → assigned |
Summary: | ChimeraX bug report submission → Changing 2D label model id can cause problems |
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