Cannot pick-select ribbon; no atom spec balloons for ribbons

[Elaine Meng]

The following bug report has been submitted:
Platform:        Darwin-18.7.0-x86_64-i386-64bit
ChimeraX Version: 1.0rc202005180441 (2020-05-18 04:41:25 UTC)
Description
cannot pick-select cartoon, no balloon atomspec over cartoon

Log:
> open /Users/meng/Desktop/startup.cxc

> alias reset view orient; view initial

> alias start toolshed show $1

> alias whereprefs info path user unversioned config

> alias previewts toolshed url https://cxtoolshed-
> preview.rbvi.ucsf.edu;toolshed reload available

> alias normalts toolshed url https://cxtoolshed.rbvi.ucsf.edu;toolshed reload
> available

> alias btut open
> http://www.cgl.ucsf.edu/home/meng/chimerax/vdocs/user/tutorials/binding-
> sites.html

> alias segtest open 0557 from emdb; vol threshold #1 min 0; vol scale #2
> value uint8; open 6nzk

executed startup.cxc  
UCSF ChimeraX version: 1.0rc202005180441 (2020-05-18)  
© 2016-2020 Regents of the University of California. All rights reserved.  
How to cite UCSF ChimeraX  

> open
> http://www.rbvi.ucsf.edu/home/meng/chimerax/docs/user/tutorials/binding-
> sites.html

Opened
http://www.rbvi.ucsf.edu/home/meng/chimerax/docs/user/tutorials/binding-
sites.html  

> open 2hyy

2hyy title:  
Human Abl kinase domain in complex with imatinib (STI571, Glivec) [more
info...]  
  
Chain information for 2hyy #1  
---  
Chain | Description  
A B C D | Proto-oncogene tyrosine-protein kinase ABL1  
  
Non-standard residues in 2hyy #1  
---  
STI — 4-(4-methyl-piperazin-1-ylmethyl)-N-[4-methyl-3-(4-pyridin-3-yl-
pyrimidin-2-ylamino)-phenyl]-benzamide (sti-571;imatinib)  
  
2hyy mmCIF Assemblies  
---  
1| author_defined_assembly  
2| author_defined_assembly  
3| author_defined_assembly  
4| author_defined_assembly  
  

> select /B:233-498

2100 atoms, 2155 bonds, 1 pseudobond, 2 models selected  

> select /C:233-498

2083 atoms, 2137 bonds, 2 pseudobonds, 2 models selected  

> select /D:233-498

2098 atoms, 2153 bonds, 1 pseudobond, 2 models selected  

> select /A:235-498

2073 atoms, 2127 bonds, 1 pseudobond, 2 models selected  

> select :STI

148 atoms, 164 bonds, 1 model selected  

> sym #1 assembly 1

> view

> close #1

> close

> open https://www.rbvi.ucsf.edu/chimerax/tutorials.html

Opened https://www.rbvi.ucsf.edu/chimerax/tutorials.html  

> open https://www.rbvi.ucsf.edu/chimerax/tutorials.html

Opened https://www.rbvi.ucsf.edu/chimerax/tutorials.html  

> open 2hyy

2hyy title:  
Human Abl kinase domain in complex with imatinib (STI571, Glivec) [more
info...]  
  
Chain information for 2hyy #1  
---  
Chain | Description  
A B C D | Proto-oncogene tyrosine-protein kinase ABL1  
  
Non-standard residues in 2hyy #1  
---  
STI — 4-(4-methyl-piperazin-1-ylmethyl)-N-[4-methyl-3-(4-pyridin-3-yl-
pyrimidin-2-ylamino)-phenyl]-benzamide (sti-571;imatinib)  
  
2hyy mmCIF Assemblies  
---  
1| author_defined_assembly  
2| author_defined_assembly  
3| author_defined_assembly  
4| author_defined_assembly  
  

> select /A:235-498

2073 atoms, 2127 bonds, 1 pseudobond, 2 models selected  

> select /B:233-498

2100 atoms, 2155 bonds, 1 pseudobond, 2 models selected  

> select /C:233-498

2083 atoms, 2137 bonds, 2 pseudobonds, 2 models selected  

> select /D:233-498

2098 atoms, 2153 bonds, 1 pseudobond, 2 models selected  

> select :STI

148 atoms, 164 bonds, 1 model selected  

> sym #1 assembly 1

> view

> show #!1 models

> hide #!2 models

> show #!2 models

> close #1

> select clear




OpenGL version: 4.1 INTEL-12.10.17
OpenGL renderer: Intel Iris Pro OpenGL Engine
OpenGL vendor: Intel Inc.Hardware:

    Hardware Overview:

      Model Name: MacBook Pro
      Model Identifier: MacBookPro11,4
      Processor Name: Intel Core i7
      Processor Speed: 2.2 GHz
      Number of Processors: 1
      Total Number of Cores: 4
      L2 Cache (per Core): 256 KB
      L3 Cache: 6 MB
      Hyper-Threading Technology: Enabled
      Memory: 16 GB
      Boot ROM Version: 197.0.0.0.0
      SMC Version (system): 2.29f24

Software:

    System Software Overview:

      System Version: macOS 10.14.6 (18G4032)
      Kernel Version: Darwin 18.7.0
      Time since boot: 8:41

Graphics/Displays:

    Intel Iris Pro:

      Chipset Model: Intel Iris Pro
      Type: GPU
      Bus: Built-In
      VRAM (Dynamic, Max): 1536 MB
      Vendor: Intel
      Device ID: 0x0d26
      Revision ID: 0x0008
      Metal: Supported, feature set macOS GPUFamily1 v4
      Displays:
        Color LCD:
          Display Type: Built-In Retina LCD
          Resolution: 2880 x 1800 Retina
          Framebuffer Depth: 24-Bit Color (ARGB8888)
          Main Display: Yes
          Mirror: Off
          Online: Yes
          Rotation: Supported
          Automatically Adjust Brightness: No

PyQt version: 5.12.3
Compiled Qt version: 5.12.4
Runtime Qt version: 5.12.8

[Tom Goddard]

Yikes. Does anyone use ChimeraX? I broke this last Friday and no one complained. Apparently I tested a ribbon fix for Tristan using the wrong ChimeraX -- I am sure ribbon pick worked in my test.

Fixed.

Change last Friday to avoid picking ribbon tethers disabled picking all ribbons. Mistakenly thought Pick.drawing was a property when in fact it is a method.

[Elaine Meng]

I'm always amazed by all the stuff I find when going through tutorials after ignoring them for a few months.  Glad you could fix it so quickly!