Tether atom spec balloon wrong
The following bug report has been submitted:
Platform: Linux-3.10.0-1062.9.1.el7.x86_64-x86_64-with-centos-7.7.1908-Core
ChimeraX Version: 1.0 (2020-05-09)
Description
The cartoon tether drawing doesn't report its identity properly on mouseover. If I open 6vsb, show cartoon and all atoms, and hover over any of the tether cones connecting back to the ribbon, the tooltip always says "/A ALA 27".
Log:
UCSF ChimeraX version: 1.0rc202005090702 (2020-05-09)
© 2016-2020 Regents of the University of California. All rights reserved.
How to cite UCSF ChimeraX
> open 6vsb
6vsb title:
Prefusion 2019-nCoV spike glycoprotein with a single receptor-binding domain
up [more info...]
Chain information for 6vsb #1
---
Chain | Description
A B C | Spike glycoprotein
Non-standard residues in 6vsb #1
---
NAG — N-acetyl-D-glucosamine
> show
OpenGL version: 3.3.0 NVIDIA 440.33.01
OpenGL renderer: TITAN Xp/PCIe/SSE2
OpenGL vendor: NVIDIA Corporation
Manufacturer: Dell Inc.
Model: Precision T5600
OS: CentOS Linux 7 Core
Architecture: 64bit ELF
CPU: 32 Intel(R) Xeon(R) CPU E5-2687W 0 @ 3.10GHz
Cache Size: 20480 KB
Memory:
total used free shared buff/cache available
Mem: 62G 5.0G 48G 116M 9.2G 57G
Swap: 4.9G 0B 4.9G
Graphics:
03:00.0 VGA compatible controller [0300]: NVIDIA Corporation GP102 [TITAN Xp] [10de:1b02] (rev a1)
Subsystem: NVIDIA Corporation Device [10de:11df]
Kernel driver in use: nvidia
Change History
(4)
| Cc: |
Conrad Huang added
|
| Component: |
Unassigned → Graphics
|
| Owner: |
set to Tom Goddard
|
| Platform: |
→ all
|
| Project: |
→ ChimeraX
|
| Status: |
new → assigned
|
| Summary: |
ChimeraX bug report submission → Tether atom spec balloon wrong
|
| Resolution: |
→ fixed
|
| Status: |
assigned → closed
|
![[ChimeraX Issue Tracking System]](/trac/ChimeraX/chrome/site/ChimeraX-icon.svg){kind=icon}
Fixed.
Tethers never had support for showing atomspec balloons, they were just ignored. But I introduced a bug when optimizing ribbons where a pick giving a tether triangle incorrectly thought it was a ribbon triangle. It is back to ignoring tethers now.
Might be nice if a tether mouse over showed a balloon for the connecting atom. You could make an enhancement request if you think that is useful -- not going to do it now right before 1.0 release.