Opened 6 years ago
Closed 6 years ago
#3132 closed defect (duplicate)
cannot import name 'RibbonDrawing' from 'chimerax.atomic.ribbon'
| Reported by: | Owned by: | Tom Goddard | |
|---|---|---|---|
| Priority: | normal | Milestone: | |
| Component: | Graphics | Version: | |
| Keywords: | Cc: | ||
| Blocked By: | Blocking: | ||
| Notify when closed: | Platform: | all | |
| Project: | ChimeraX |
Description
The following bug report has been submitted:
Platform: Darwin-18.0.0-x86_64-i386-64bit
ChimeraX Version: 0.94 (2020-04-09)
Description
(Describe the actions that caused this problem to occur here)
Log:
UCSF ChimeraX version: 0.94 (2020-04-09)
© 2016-2020 Regents of the University of California. All rights reserved.
How to cite UCSF ChimeraX
> open 6tap
6tap title:
Structure of the dArc1 capsid [more info...]
Chain information for 6tap #1
---
Chain | Description
A B C D E | Activity-regulated cytoskeleton associated protein 1
Non-standard residues in 6tap #1
---
ZN — zinc ion
6tap mmCIF Assemblies
---
1| author_defined_assembly
> sequence chain #1/A#1/B#1/C#1/D#1/E
Alignment identifier is 1
> sym #1 assembly 1
> view
Traceback (most recent call last):
File
"/Applications/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-
packages/chimerax/ui/gui.py", line 601, in customEvent
func(*args, **kw)
File
"/Applications/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-
packages/chimerax/ui/widgets/htmlview.py", line 429, in defer
cxcmd(session, topic)
File
"/Applications/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-
packages/chimerax/ui/widgets/htmlview.py", line 445, in cxcmd
run(session, cmd)
File
"/Applications/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-
packages/chimerax/core/commands/run.py", line 31, in run
results = command.run(text, log=log)
File
"/Applications/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-
packages/chimerax/core/commands/cli.py", line 2848, in run
result = ci.function(session, **kw_args)
File
"/Applications/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-
packages/chimerax/std_commands/view.py", line 50, in view
undo = UndoView("view", session, models)
File
"/Applications/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-
packages/chimerax/std_commands/view.py", line 522, in __init__
self._before = NamedView(v, v.center_of_rotation, models)
File
"/Applications/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-
packages/chimerax/graphics/view.py", line 654, in _get_cofr
cofr = self._compute_center_of_rotation()
File
"/Applications/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-
packages/chimerax/graphics/view.py", line 681, in _compute_center_of_rotation
p = self._front_center_cofr()
File
"/Applications/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-
packages/chimerax/graphics/view.py", line 749, in _front_center_cofr
cr = self._front_center_point() # Can be None
File
"/Applications/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-
packages/chimerax/graphics/view.py", line 759, in _front_center_point
exclude=lambda d: hasattr(d, 'no_cofr') and d.no_cofr)
File
"/Applications/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-
packages/chimerax/graphics/view.py", line 774, in first_intercept
p = self.first_intercept_on_segment(xyz1, xyz2, exclude=exclude,
beyond=beyond)
File
"/Applications/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-
packages/chimerax/graphics/view.py", line 788, in first_intercept_on_segment
p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude)
File
"/Applications/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-
packages/chimerax/graphics/drawing.py", line 986, in first_intercept
p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2,
exclude=exclude)
File
"/Applications/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-
packages/chimerax/graphics/drawing.py", line 1002, in first_intercept_children
p = d.first_intercept(cxyz1, cxyz2, exclude=exclude)
File
"/Applications/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-
packages/chimerax/atomic/structure.py", line 580, in first_intercept
b = self._pick_bounds()
File
"/Applications/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-
packages/chimerax/atomic/structure.py", line 604, in _pick_bounds
from .ribbon import RibbonDrawing
ImportError: cannot import name 'RibbonDrawing' from 'chimerax.atomic.ribbon'
(/Applications/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-
packages/chimerax/atomic/ribbon.py)
ImportError: cannot import name 'RibbonDrawing' from 'chimerax.atomic.ribbon'
(/Applications/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-
packages/chimerax/atomic/ribbon.py)
File
"/Applications/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-
packages/chimerax/atomic/structure.py", line 604, in _pick_bounds
from .ribbon import RibbonDrawing
See log for complete Python traceback.
OpenGL version: 4.1 ATI-2.0.36
OpenGL renderer: AMD Radeon Pro 555 OpenGL Engine
OpenGL vendor: ATI Technologies Inc.
Change History (2)
comment:1 by , 6 years ago
| Component: | Unassigned → Graphics |
|---|---|
| Owner: | set to |
| Platform: | → all |
| Project: | → ChimeraX |
| Status: | new → assigned |
| Summary: | ChimeraX bug report submission → cannot import name 'RibbonDrawing' from 'chimerax.atomic.ribbon' |
comment:2 by , 6 years ago
| Resolution: | → duplicate |
|---|---|
| Status: | assigned → closed |
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Fixed 4 weeks ago.