![[ChimeraX Issue Tracking System]](/trac/ChimeraX/chrome/site/ChimeraX-icon.svg){kind=icon}
Opened 6 years ago
Closed 6 years ago
#3006 closed defect (duplicate)
File→Open crash
| Reported by: | Owned by: | pett | |
|---|---|---|---|
| Priority: | normal | Milestone: | |
| Component: | Input/Output | Version: | |
| Keywords: | Cc: | ||
| Blocked By: | Blocking: | ||
| Notify when closed: | Platform: | all | |
| Project: | ChimeraX |
Description
The following bug report has been submitted:
Platform: Darwin-19.3.0-x86_64-i386-64bit
ChimeraX Version: 0.93 (2020-03-14)
Description
Last time you used ChimeraX it crashed.
Please describe steps that led to the crash here.
Process: ChimeraX [49470]
Path: /Applications/ChimeraX_Daily.app/Contents/MacOS/ChimeraX
Identifier: edu.ucsf.cgl.ChimeraX
Version: 0.93.0 (0.93.0.0)
Code Type: X86-64 (Native)
Parent Process: ??? [1]
Responsible: ChimeraX [49470]
User ID: 501
Date/Time: 2020-04-02 12:59:17.139 -0500
OS Version: Mac OS X 10.15.3 (19D76)
Report Version: 12
Bridge OS Version: 4.2 (17P3050)
Anonymous UUID: 8EDFD33C-344D-4D25-9A25-C18A4035CA58
Time Awake Since Boot: 320000 seconds
System Integrity Protection: disabled
Crashed Thread: 0 CrBrowserMain Dispatch queue: com.apple.main-thread
Exception Type: EXC_BAD_ACCESS (SIGSEGV)
Exception Codes: KERN_INVALID_ADDRESS at 0x0000000000000000
Exception Note: EXC_CORPSE_NOTIFY
VM Regions Near 0:
-->
__TEXT 0000000107da0000-0000000107da1000 [ 4K] r-x/rwx SM=COW /Applications/ChimeraX_Daily.app/Contents/MacOS/ChimeraX
Thread 0 Crashed:: CrBrowserMain Dispatch queue: com.apple.main-thread
0 libsystem_kernel.dylib 0x00007fff639d97fa __pthread_kill + 10
1 libsystem_pthread.dylib 0x00007fff63a96bc1 pthread_kill + 432
2 libsystem_c.dylib 0x00007fff638f03a2 raise + 26
3 libsystem_platform.dylib 0x00007fff63a8b42d _sigtramp + 29
4 ??? 000000000000000000 0 + 0
5 com.apple.FinderKit 0x00007fff47ad33fd TFENode::FinderTags(bool) const + 71
6 com.apple.FinderKit 0x00007fff47c3c314 +[FI_TListViewController updateTagsForCellView:node:] + 42
7 com.apple.FinderKit 0x00007fff47c340ef -[FI_TListViewController dataSourceItemsDidChange:] + 2444
8 com.apple.FinderKit 0x00007fff47c3306b -[FI_TListViewController dataSourceChanged:] + 5808
9 com.apple.FinderKit 0x00007fff47c25e52 std::__1::__function::__func, void (NSNotification*)>::operator()(NSNotification* __strong&&) + 210
10 com.apple.FinderKit 0x00007fff47cf2539 std::__1::function::operator()(NSNotification*) const + 41
11 com.apple.FinderKit 0x00007fff47cf24d3 -[FI_TNotificationCenterObserverGlue invoke:] + 71
12 com.apple.CoreFoundation 0x00007fff2c1e435f __CFNOTIFICATIONCENTER_IS_CALLING_OUT_TO_AN_OBSERVER__ + 12
13 com.apple.CoreFoundation 0x00007fff2c1e42f3 ___CFXRegistrationPost1_block_invoke + 63
14 com.apple.CoreFoundation 0x00007fff2c1e4268 _CFXRegistrationPost1 + 372
15 com.apple.CoreFoundation 0x00007fff2c1e3ebe ___CFXNotificationPost_block_invoke + 97
16 com.apple.CoreFoundation 0x00007fff2c1b37e2 -[_CFXNotificationRegistrar find:object:observer:enumerator:] + 1575
17 com.apple.CoreFoundation 0x00007fff2c1b2c82 _CFXNotificationPost + 1351
18 com.apple.FinderKit 0x00007fff47d7b85e fstd::finder_callable_details::callable_holder const&)::$_2, void>::operator()() + 446
19 com.apple.FinderKit 0x00007fff47d6db7d TBlockingQueue::Dequeue(std::__1::chrono::duration >) + 371
20 com.apple.FinderKit 0x00007fff47d803cf fstd::finder_callable_details::callable_holder::operator()() + 75
21 com.apple.FinderKit 0x00007fff47ba89d0 invocation function for block in CallOnMainThreadHelper(fstd::unique_function&&, bool)::$_2::operator void () block_pointer() const + 18
22 com.apple.CoreFoundation 0x00007fff2c1ee7ab __CFRUNLOOP_IS_CALLING_OUT_TO_A_BLOCK__ + 12
23 com.apple.CoreFoundation 0x00007fff2c1ee6ed __CFRunLoopDoBlocks + 379
24 com.apple.CoreFoundation 0x00007fff2c1edd30 __CFRunLoopRun + 2792
25 com.apple.CoreFoundation 0x00007fff2c1ecbd3 CFRunLoopRunSpecific + 499
26 com.apple.HIToolbox 0x00007fff2ad4265d RunCurrentEventLoopInMode + 292
27 com.apple.HIToolbox 0x00007fff2ad422a9 ReceiveNextEventCommon + 356
28 com.apple.HIToolbox 0x00007fff2ad42127 _BlockUntilNextEventMatchingListInModeWithFilter + 64
29 com.apple.AppKit 0x00007fff293b2ba4 _DPSNextEvent + 990
30 com.apple.AppKit 0x00007fff293b1380 -[NSApplication(NSEvent) _nextEventMatchingEventMask:untilDate:inMode:dequeue:] + 1352
31 libqcocoa.dylib 0x00000001275b7d14 0x127583000 + 216340
32 QtCore 0x000000011d886a57 QCoreApplication::processEvents(QFlags) + 39
33 libqcocoa.dylib 0x00000001275eed87 0x127583000 + 441735
34 libqcocoa.dylib 0x00000001275f26d3 0x127583000 + 456403
35 QtWidgets 0x000000011cdb87c9 QDialog::exec() + 281
36 QtWidgets 0x000000011cdc9037 QFileDialog::getOpenFileUrls(QWidget*, QString const&, QUrl const&, QString const&, QString*, QFlags, QStringList const&) + 359
37 QtWidgets 0x000000011cdc8ce5 QFileDialog::getOpenFileNames(QWidget*, QString const&, QString const&, QString const&, QString*, QFlags) + 245
38 QtWidgets.so 0x000000011c8563da meth_QFileDialog_getOpenFileNames(_object*, _object*, _object*) + 410
39 org.python.python 0x0000000107dca910 _PyMethodDef_RawFastCallKeywords + 624
40 org.python.python 0x0000000107dc9c9c _PyCFunction_FastCallKeywords + 44
41 org.python.python 0x0000000107e940c9 call_function + 617
42 org.python.python 0x0000000107e8c8a9 _PyEval_EvalFrameDefault + 5865
43 org.python.python 0x0000000107e94d84 _PyEval_EvalCodeWithName + 2788
44 org.python.python 0x0000000107dc9c56 _PyFunction_FastCallKeywords + 230
45 org.python.python 0x0000000107e94131 call_function + 721
46 org.python.python 0x0000000107e8c77a _PyEval_EvalFrameDefault + 5562
47 org.python.python 0x0000000107dca153 function_code_fastcall + 195
48 org.python.python 0x0000000107e94131 call_function + 721
49 org.python.python 0x0000000107e8c77a _PyEval_EvalFrameDefault + 5562
50 org.python.python 0x0000000107e94d84 _PyEval_EvalCodeWithName + 2788
51 org.python.python 0x0000000107dc9732 _PyFunction_FastCallDict + 450
52 QtCore.so 0x000000011f94ef17 PyQtSlot::call(_object*, _object*) const + 39
53 QtCore.so 0x000000011f94ee26 PyQtSlot::invoke(void**, _object*, void*, bool) const + 374
54 QtCore.so 0x000000011f94f925 PyQtSlotProxy::unislot(void**) + 85
55 QtCore.so 0x000000011f94f89a PyQtSlotProxy::qt_metacall(QMetaObject::Call, int, void**) + 58
56 QtCore 0x000000011d8b737d QMetaObject::activate(QObject*, int, int, void**) + 1773
57 QtWidgets 0x000000011cbb2105 QAction::activate(QAction::ActionEvent) + 309
58 QtCore 0x000000011d8aff81 QObject::event(QEvent*) + 753
59 QtWidgets.so 0x000000011c78b810 sipQAction::event(QEvent*) + 192
60 QtWidgets 0x000000011cbbb70d QApplicationPrivate::notify_helper(QObject*, QEvent*) + 269
61 QtWidgets 0x000000011cbbcb12 QApplication::notify(QObject*, QEvent*) + 594
62 QtWidgets.so 0x000000011c78a3ca sipQApplication::notify(QObject*, QEvent*) + 234
63 QtCore 0x000000011d886564 QCoreApplication::notifyInternal2(QObject*, QEvent*) + 212
64 QtCore 0x000000011d88779e QCoreApplicationPrivate::sendPostedEvents(QObject*, int, QThreadData*) + 878
65 libqcocoa.dylib 0x00000001275b8d39 0x127583000 + 220473
66 libqcocoa.dylib 0x00000001275b94a8 0x127583000 + 222376
67 com.apple.CoreFoundation 0x00007fff2c1eeb21 __CFRUNLOOP_IS_CALLING_OUT_TO_A_SOURCE0_PERFORM_FUNCTION__ + 17
68 com.apple.CoreFoundation 0x00007fff2c1eeac0 __CFRunLoopDoSource0 + 103
69 com.apple.CoreFoundation 0x00007fff2c1ee930 __CFRunLoopDoSources0 + 301
70 com.apple.CoreFoundation 0x00007fff2c1ed740 __CFRunLoopRun + 1272
71 com.apple.CoreFoundation 0x00007fff2c1ecbd3 CFRunLoopRunSpecific + 499
72 com.apple.HIToolbox 0x00007fff2ad4265d RunCurrentEventLoopInMode + 292
73 com.apple.HIToolbox 0x00007fff2ad4239d ReceiveNextEventCommon + 600
74 com.apple.HIToolbox 0x00007fff2ad42127 _BlockUntilNextEventMatchingListInModeWithFilter + 64
75 com.apple.AppKit 0x00007fff293b2ba4 _DPSNextEvent + 990
76 com.apple.AppKit 0x00007fff293b1380 -[NSApplication(NSEvent) _nextEventMatchingEventMask:untilDate:inMode:dequeue:] + 1352
77 com.apple.AppKit 0x00007fff293a309e -[NSApplication run] + 658
78 libqcocoa.dylib 0x00000001275b8223 0x127583000 + 217635
79 QtCore 0x000000011d881b7f QEventLoop::exec(QFlags) + 431
80 QtCore 0x000000011d886b72 QCoreApplication::exec() + 130
81 QtWidgets.so 0x000000011c8797d2 meth_QApplication_exec_(_object*, _object*) + 82
82 org.python.python 0x0000000107dca79b _PyMethodDef_RawFastCallKeywords + 251
83 org.python.python 0x0000000107dc9c9c _PyCFunction_FastCallKeywords + 44
84 org.python.python 0x0000000107e940c9 call_function + 617
85 org.python.python 0x0000000107e8c77a _PyEval_EvalFrameDefault + 5562
86 org.python.python 0x0000000107dca153 function_code_fastcall + 195
87 org.python.python 0x0000000107e94131 call_function + 721
88 org.python.python 0x0000000107e8c77a _PyEval_EvalFrameDefault + 5562
89 org.python.python 0x0000000107e94d84 _PyEval_EvalCodeWithName + 2788
90 org.python.python 0x0000000107dc9c56 _PyFunction_FastCallKeywords + 230
91 org.python.python 0x0000000107e94131 call_function + 721
92 org.python.python 0x0000000107e8c80b _PyEval_EvalFrameDefault + 5707
93 org.python.python 0x0000000107e94d84 _PyEval_EvalCodeWithName + 2788
94 org.python.python 0x0000000107e8b120 PyEval_EvalCode + 48
95 org.python.python 0x0000000107e88783 builtin_exec + 563
96 org.python.python 0x0000000107dca94e _PyMethodDef_RawFastCallKeywords + 686
97 org.python.python 0x0000000107dc9c9c _PyCFunction_FastCallKeywords + 44
98 org.python.python 0x0000000107e940c9 call_function + 617
99 org.python.python 0x0000000107e8c80b _PyEval_EvalFrameDefault + 5707
100 org.python.python 0x0000000107e94d84 _PyEval_EvalCodeWithName + 2788
101 org.python.python 0x0000000107dc9c56 _PyFunction_FastCallKeywords + 230
102 org.python.python 0x0000000107e94131 call_function + 721
103 org.python.python 0x0000000107e8c80b _PyEval_EvalFrameDefault + 5707
104 org.python.python 0x0000000107e94d84 _PyEval_EvalCodeWithName + 2788
105 org.python.python 0x0000000107dc9732 _PyFunction_FastCallDict + 450
106 org.python.python 0x0000000107ee9163 pymain_run_module + 147
107 org.python.python 0x0000000107ee8221 pymain_main + 5041
108 org.python.python 0x0000000107ee6e63 Py_Main + 51
109 edu.ucsf.cgl.ChimeraX 0x0000000107da0dc8 main + 120
110 libdyld.dylib 0x00007fff638927fd start + 1
Thread 1:
0 libsystem_kernel.dylib 0x00007fff639d5ce6 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff63a97185 _pthread_cond_wait + 701
2 libopenblasp-r0.3.7.dylib 0x000000010958ac3b blas_thread_server + 619
3 libsystem_pthread.dylib 0x00007fff63a96e65 _pthread_start + 148
4 libsystem_pthread.dylib 0x00007fff63a9283b thread_start + 15
Thread 2:
0 libsystem_kernel.dylib 0x00007fff639d5ce6 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff63a97185 _pthread_cond_wait + 701
2 libopenblasp-r0.3.7.dylib 0x000000010958ac3b blas_thread_server + 619
3 libsystem_pthread.dylib 0x00007fff63a96e65 _pthread_start + 148
4 libsystem_pthread.dylib 0x00007fff63a9283b thread_start + 15
Thread 3:
0 libsystem_kernel.dylib 0x00007fff639d5ce6 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff63a97185 _pthread_cond_wait + 701
2 libopenblasp-r0.3.7.dylib 0x000000010958ac3b blas_thread_server + 619
3 libsystem_pthread.dylib 0x00007fff63a96e65 _pthread_start + 148
4 libsystem_pthread.dylib 0x00007fff63a9283b thread_start + 15
Thread 4:
0 libsystem_kernel.dylib 0x00007fff639d5ce6 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff63a97185 _pthread_cond_wait + 701
2 libopenblasp-r0.3.7.dylib 0x000000010958ac3b blas_thread_server + 619
3 libsystem_pthread.dylib 0x00007fff63a96e65 _pthread_start + 148
4 libsystem_pthread.dylib 0x00007fff63a9283b thread_start + 15
Thread 5:
0 libsystem_kernel.dylib 0x00007fff639d5ce6 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff63a97185 _pthread_cond_wait + 701
2 libopenblasp-r0.3.7.dylib 0x000000010958ac3b blas_thread_server + 619
3 libsystem_pthread.dylib 0x00007fff63a96e65 _pthread_start + 148
4 libsystem_pthread.dylib 0x00007fff63a9283b thread_start + 15
Thread 6:
0 libsystem_kernel.dylib 0x00007fff639d5ce6 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff63a97185 _pthread_cond_wait + 701
2 libopenblasp-r0.3.7.dylib 0x000000010958ac3b blas_thread_server + 619
3 libsystem_pthread.dylib 0x00007fff63a96e65 _pthread_start + 148
4 libsystem_pthread.dylib 0x00007fff63a9283b thread_start + 15
Thread 7:
0 libsystem_kernel.dylib 0x00007fff639d5ce6 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff63a97185 _pthread_cond_wait + 701
2 libopenblasp-r0.3.7.dylib 0x000000010958ac3b blas_thread_server + 619
3 libsystem_pthread.dylib 0x00007fff63a96e65 _pthread_start + 148
4 libsystem_pthread.dylib 0x00007fff63a9283b thread_start + 15
Thread 8:: com.apple.NSEventThread
0 libsystem_kernel.dylib 0x00007fff639d325a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff639d35d0 mach_msg + 60
2 com.apple.CoreFoundation 0x00007fff2c1eed0b __CFRunLoopServiceMachPort + 322
3 com.apple.CoreFoundation 0x00007fff2c1ed8e7 __CFRunLoopRun + 1695
4 com.apple.CoreFoundation 0x00007fff2c1ecbd3 CFRunLoopRunSpecific + 499
5 com.apple.AppKit 0x00007fff29555792 _NSEventThread + 132
6 libsystem_pthread.dylib 0x00007fff63a96e65 _pthread_start + 148
7 libsystem_pthread.dylib 0x00007fff63a9283b thread_start + 15
Thread 9:: NetworkConfigWatcher
0 libsystem_kernel.dylib 0x00007fff639d325a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff639d35d0 mach_msg + 60
2 QtWebEngineCore 0x0000000122207d7d 0x12005c000 + 35306877
3 QtWebEngineCore 0x0000000122207c7f 0x12005c000 + 35306623
4 QtWebEngineCore 0x00000001221bbaad 0x12005c000 + 34994861
5 QtWebEngineCore 0x00000001221e4ad5 0x12005c000 + 35162837
6 QtWebEngineCore 0x000000012223740c 0x12005c000 + 35501068
7 QtWebEngineCore 0x0000000122277167 0x12005c000 + 35762535
8 libsystem_pthread.dylib 0x00007fff63a96e65 _pthread_start + 148
9 libsystem_pthread.dylib 0x00007fff63a9283b thread_start + 15
Thread 10:: DnsConfigService
0 libsystem_kernel.dylib 0x00007fff639d7bce kevent + 10
1 QtWebEngineCore 0x00000001224c93f9 0x12005c000 + 38196217
2 QtWebEngineCore 0x00000001224c670d 0x12005c000 + 38184717
3 QtWebEngineCore 0x000000012227d72c 0x12005c000 + 35788588
4 QtWebEngineCore 0x00000001221e4ad5 0x12005c000 + 35162837
5 QtWebEngineCore 0x000000012223740c 0x12005c000 + 35501068
6 QtWebEngineCore 0x0000000122277167 0x12005c000 + 35762535
7 libsystem_pthread.dylib 0x00007fff63a96e65 _pthread_start + 148
8 libsystem_pthread.dylib 0x00007fff63a9283b thread_start + 15
Thread 11:: TaskSchedulerServiceThread
0 libsystem_kernel.dylib 0x00007fff639d7bce kevent + 10
1 QtWebEngineCore 0x00000001224c93f9 0x12005c000 + 38196217
2 QtWebEngineCore 0x00000001224c670d 0x12005c000 + 38184717
3 QtWebEngineCore 0x000000012227d714 0x12005c000 + 35788564
4 QtWebEngineCore 0x00000001221e4ad5 0x12005c000 + 35162837
5 QtWebEngineCore 0x00000001222264c4 0x12005c000 + 35431620
6 QtWebEngineCore 0x000000012223740c 0x12005c000 + 35501068
7 QtWebEngineCore 0x0000000122277167 0x12005c000 + 35762535
8 libsystem_pthread.dylib 0x00007fff63a96e65 _pthread_start + 148
9 libsystem_pthread.dylib 0x00007fff63a9283b thread_start + 15
Thread 12:: TaskSchedulerForegroundWorker
0 libsystem_kernel.dylib 0x00007fff639d325a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff639d35d0 mach_msg + 60
2 QtWebEngineCore 0x0000000122207d7d 0x12005c000 + 35306877
3 QtWebEngineCore 0x0000000122207e71 0x12005c000 + 35307121
4 QtWebEngineCore 0x000000012221f778 0x12005c000 + 35403640
5 QtWebEngineCore 0x00000001222200ab 0x12005c000 + 35405995
6 QtWebEngineCore 0x000000012221fd14 0x12005c000 + 35405076
7 QtWebEngineCore 0x0000000122277167 0x12005c000 + 35762535
8 libsystem_pthread.dylib 0x00007fff63a96e65 _pthread_start + 148
9 libsystem_pthread.dylib 0x00007fff63a9283b thread_start + 15
Thread 13:: TaskSchedulerForegroundBlockingWorker
0 libsystem_kernel.dylib 0x00007fff639d325a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff639d35d0 mach_msg + 60
2 QtWebEngineCore 0x0000000122207d7d 0x12005c000 + 35306877
3 QtWebEngineCore 0x0000000122207e71 0x12005c000 + 35307121
4 QtWebEngineCore 0x000000012221f778 0x12005c000 + 35403640
5 QtWebEngineCore 0x00000001222200ab 0x12005c000 + 35405995
6 QtWebEngineCore 0x000000012221fd14 0x12005c000 + 35405076
7 QtWebEngineCore 0x0000000122277167 0x12005c000 + 35762535
8 libsystem_pthread.dylib 0x00007fff63a96e65 _pthread_start + 148
9 libsystem_pthread.dylib 0x00007fff63a9283b thread_start + 15
Thread 14:: TaskSchedulerForegroundBlockingWorker
0 libsystem_kernel.dylib 0x00007fff639d325a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff639d35d0 mach_msg + 60
2 QtWebEngineCore 0x0000000122207d7d 0x12005c000 + 35306877
3 QtWebEngineCore 0x0000000122207e71 0x12005c000 + 35307121
4 QtWebEngineCore 0x000000012221f778 0x12005c000 + 35403640
5 QtWebEngineCore 0x00000001222200ab 0x12005c000 + 35405995
6 QtWebEngineCore 0x000000012221fd14 0x12005c000 + 35405076
7 QtWebEngineCore 0x0000000122277167 0x12005c000 + 35762535
8 libsystem_pthread.dylib 0x00007fff63a96e65 _pthread_start + 148
9 libsystem_pthread.dylib 0x00007fff63a9283b thread_start + 15
Thread 15:: TaskSchedulerBackgroundWorker
0 libsystem_kernel.dylib 0x00007fff639d325a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff639d35d0 mach_msg + 60
2 QtWebEngineCore 0x0000000122207d7d 0x12005c000 + 35306877
3 QtWebEngineCore 0x0000000122207e71 0x12005c000 + 35307121
4 QtWebEngineCore 0x000000012221f778 0x12005c000 + 35403640
5 QtWebEngineCore 0x00000001222200ab 0x12005c000 + 35405995
6 QtWebEngineCore 0x000000012221fc84 0x12005c000 + 35404932
7 QtWebEngineCore 0x0000000122277167 0x12005c000 + 35762535
8 libsystem_pthread.dylib 0x00007fff63a96e65 _pthread_start + 148
9 libsystem_pthread.dylib 0x00007fff63a9283b thread_start + 15
Thread 16:: TaskSchedulerBackgroundBlockingWorker
0 libsystem_kernel.dylib 0x00007fff639d325a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff639d35d0 mach_msg + 60
2 QtWebEngineCore 0x0000000122207d7d 0x12005c000 + 35306877
3 QtWebEngineCore 0x0000000122207e71 0x12005c000 + 35307121
4 QtWebEngineCore 0x000000012221f778 0x12005c000 + 35403640
5 QtWebEngineCore 0x00000001222200ab 0x12005c000 + 35405995
6 QtWebEngineCore 0x000000012221fc84 0x12005c000 + 35404932
7 QtWebEngineCore 0x0000000122277167 0x12005c000 + 35762535
8 libsystem_pthread.dylib 0x00007fff63a96e65 _pthread_start + 148
9 libsystem_pthread.dylib 0x00007fff63a9283b thread_start + 15
Thread 17:: Chrome_IOThread
0 libsystem_kernel.dylib 0x00007fff639d7bce kevent + 10
1 QtWebEngineCore 0x00000001224c93f9 0x12005c000 + 38196217
2 QtWebEngineCore 0x00000001224c670d 0x12005c000 + 38184717
3 QtWebEngineCore 0x000000012227d714 0x12005c000 + 35788564
4 QtWebEngineCore 0x00000001221e4ad5 0x12005c000 + 35162837
5 QtWebEngineCore 0x0000000121b4aa74 0x12005c000 + 28240500
6 QtWebEngineCore 0x000000012223740c 0x12005c000 + 35501068
7 QtWebEngineCore 0x0000000122277167 0x12005c000 + 35762535
8 libsystem_pthread.dylib 0x00007fff63a96e65 _pthread_start + 148
9 libsystem_pthread.dylib 0x00007fff63a9283b thread_start + 15
Thread 18:: TaskSchedulerSingleThreadSharedBackgroundBlocking0
0 libsystem_kernel.dylib 0x00007fff639d325a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff639d35d0 mach_msg + 60
2 QtWebEngineCore 0x0000000122207d7d 0x12005c000 + 35306877
3 QtWebEngineCore 0x0000000122207c7f 0x12005c000 + 35306623
4 QtWebEngineCore 0x000000012221f76a 0x12005c000 + 35403626
5 QtWebEngineCore 0x000000012221fe0f 0x12005c000 + 35405327
6 QtWebEngineCore 0x000000012221fcb4 0x12005c000 + 35404980
7 QtWebEngineCore 0x0000000122277167 0x12005c000 + 35762535
8 libsystem_pthread.dylib 0x00007fff63a96e65 _pthread_start + 148
9 libsystem_pthread.dylib 0x00007fff63a9283b thread_start + 15
Thread 19:: CompositorTileWorker1/57091
0 libsystem_kernel.dylib 0x00007fff639d5ce6 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff63a97185 _pthread_cond_wait + 701
2 QtWebEngineCore 0x00000001222759f8 0x12005c000 + 35756536
3 QtWebEngineCore 0x00000001231fdfe8 0x12005c000 + 52043752
4 QtWebEngineCore 0x00000001222360e4 0x12005c000 + 35496164
5 QtWebEngineCore 0x0000000122277167 0x12005c000 + 35762535
6 libsystem_pthread.dylib 0x00007fff63a96e65 _pthread_start + 148
7 libsystem_pthread.dylib 0x00007fff63a9283b thread_start + 15
Thread 20:: AudioThread
0 libsystem_kernel.dylib 0x00007fff639d325a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff639d35d0 mach_msg + 60
2 QtWebEngineCore 0x0000000122207d7d 0x12005c000 + 35306877
3 QtWebEngineCore 0x0000000122207c7f 0x12005c000 + 35306623
4 QtWebEngineCore 0x00000001221bbaad 0x12005c000 + 34994861
5 QtWebEngineCore 0x00000001221e4ad5 0x12005c000 + 35162837
6 QtWebEngineCore 0x000000012223740c 0x12005c000 + 35501068
7 QtWebEngineCore 0x0000000122277167 0x12005c000 + 35762535
8 libsystem_pthread.dylib 0x00007fff63a96e65 _pthread_start + 148
9 libsystem_pthread.dylib 0x00007fff63a9283b thread_start + 15
Thread 21:: NetworkConfigWatcher
0 libsystem_kernel.dylib 0x00007fff639d325a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff639d35d0 mach_msg + 60
2 QtWebEngineCore 0x0000000122207d7d 0x12005c000 + 35306877
3 QtWebEngineCore 0x0000000122207c7f 0x12005c000 + 35306623
4 QtWebEngineCore 0x00000001221bbaad 0x12005c000 + 34994861
5 QtWebEngineCore 0x00000001221e4ad5 0x12005c000 + 35162837
6 QtWebEngineCore 0x000000012223740c 0x12005c000 + 35501068
7 QtWebEngineCore 0x0000000122277167 0x12005c000 + 35762535
8 libsystem_pthread.dylib 0x00007fff63a96e65 _pthread_start + 148
9 libsystem_pthread.dylib 0x00007fff63a9283b thread_start + 15
Thread 22:: Chrome_InProcGpuThread
0 libsystem_kernel.dylib 0x00007fff639d325a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff639d35d0 mach_msg + 60
2 QtWebEngineCore 0x0000000122207d7d 0x12005c000 + 35306877
3 QtWebEngineCore 0x00000001221bbaa2 0x12005c000 + 34994850
4 QtWebEngineCore 0x00000001221e4ad5 0x12005c000 + 35162837
5 QtWebEngineCore 0x000000012223740c 0x12005c000 + 35501068
6 QtWebEngineCore 0x0000000122277167 0x12005c000 + 35762535
7 libsystem_pthread.dylib 0x00007fff63a96e65 _pthread_start + 148
8 libsystem_pthread.dylib 0x00007fff63a9283b thread_start + 15
Thread 23:: Chrome_ChildIOThread
0 libsystem_kernel.dylib 0x00007fff639d7bce kevent + 10
1 QtWebEngineCore 0x00000001224c93f9 0x12005c000 + 38196217
2 QtWebEngineCore 0x00000001224c670d 0x12005c000 + 38184717
3 QtWebEngineCore 0x000000012227d72c 0x12005c000 + 35788588
4 QtWebEngineCore 0x00000001221e4ad5 0x12005c000 + 35162837
5 QtWebEngineCore 0x000000012223740c 0x12005c000 + 35501068
6 QtWebEngineCore 0x0000000122277167 0x12005c000 + 35762535
7 libsystem_pthread.dylib 0x00007fff63a96e65 _pthread_start + 148
8 libsystem_pthread.dylib 0x00007fff63a9283b thread_start + 15
Thread 24:: TaskSchedulerSingleThreadForegroundBlocking1
0 libsystem_kernel.dylib 0x00007fff639d325a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff639d35d0 mach_msg + 60
2 QtWebEngineCore 0x0000000122207d7d 0x12005c000 + 35306877
3 QtWebEngineCore 0x0000000122207c7f 0x12005c000 + 35306623
4 QtWebEngineCore 0x000000012221f76a 0x12005c000 + 35403626
5 QtWebEngineCore 0x00000001222200ab 0x12005c000 + 35405995
6 QtWebEngineCore 0x000000012221fd74 0x12005c000 + 35405172
7 QtWebEngineCore 0x0000000122277167 0x12005c000 + 35762535
8 libsystem_pthread.dylib 0x00007fff63a96e65 _pthread_start + 148
9 libsystem_pthread.dylib 0x00007fff63a9283b thread_start + 15
Thread 25:: QFileInfoGatherer
0 libsystem_kernel.dylib 0x00007fff639d5ce6 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff63a97185 _pthread_cond_wait + 701
2 QtCore 0x000000011d6c6aeb 0x11d69c000 + 174827
3 QtCore 0x000000011d6c6a4c QWaitCondition::wait(QMutex*, QDeadlineTimer) + 108
4 QtWidgets 0x000000011cde6762 0x11cbab000 + 2340706
5 QtCore 0x000000011d6be2f3 0x11d69c000 + 140019
6 libsystem_pthread.dylib 0x00007fff63a96e65 _pthread_start + 148
7 libsystem_pthread.dylib 0x00007fff63a9283b thread_start + 15
Thread 26:: NetworkConfigWatcher
0 libsystem_kernel.dylib 0x00007fff639d325a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff639d35d0 mach_msg + 60
2 QtWebEngineCore 0x0000000122207d7d 0x12005c000 + 35306877
3 QtWebEngineCore 0x0000000122207c7f 0x12005c000 + 35306623
4 QtWebEngineCore 0x00000001221bbaad 0x12005c000 + 34994861
5 QtWebEngineCore 0x00000001221e4ad5 0x12005c000 + 35162837
6 QtWebEngineCore 0x000000012223740c 0x12005c000 + 35501068
7 QtWebEngineCore 0x0000000122277167 0x12005c000 + 35762535
8 libsystem_pthread.dylib 0x00007fff63a96e65 _pthread_start + 148
9 libsystem_pthread.dylib 0x00007fff63a9283b thread_start + 15
Thread 27:: TaskSchedulerForegroundWorker
0 libsystem_kernel.dylib 0x00007fff639d325a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff639d35d0 mach_msg + 60
2 QtWebEngineCore 0x0000000122207d7d 0x12005c000 + 35306877
3 QtWebEngineCore 0x0000000122207e71 0x12005c000 + 35307121
4 QtWebEngineCore 0x000000012221f778 0x12005c000 + 35403640
5 QtWebEngineCore 0x00000001222200ab 0x12005c000 + 35405995
6 QtWebEngineCore 0x000000012221fd14 0x12005c000 + 35405076
7 QtWebEngineCore 0x0000000122277167 0x12005c000 + 35762535
8 libsystem_pthread.dylib 0x00007fff63a96e65 _pthread_start + 148
9 libsystem_pthread.dylib 0x00007fff63a9283b thread_start + 15
Thread 28:
0 libsystem_pthread.dylib 0x00007fff63a92818 start_wqthread + 0
Thread 29:
0 libsystem_pthread.dylib 0x00007fff63a92818 start_wqthread + 0
Thread 30:: Dispatch queue: TThumbnailExtractorThread
0 libsystem_kernel.dylib 0x00007fff639d5ce6 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff63a97185 _pthread_cond_wait + 701
2 libc++.1.dylib 0x00007fff609aacc1 std::__1::condition_variable::__do_timed_wait(std::__1::unique_lock&, std::__1::chrono::time_point > >) + 93
3 com.apple.FinderKit 0x00007fff47ba8ae5 std::__1::cv_status std::__1::condition_variable_any::wait_until > >(std::__1::mutex&, std::__1::chrono::time_point > > const&) + 165
4 com.apple.FinderKit 0x00007fff47ba8284 TConditionVariable::WaitWithTimeout(std::__1::mutex&, std::__1::chrono::duration >) + 64
5 com.apple.FinderKit 0x00007fff47c089e1 TThumbnailExtractorThread::Main() + 845
6 com.apple.FinderKit 0x00007fff47c08108 invocation function for block in TThumbnailExtractorThread::Enqueue(TFENode const&, TFENode const&, double, CGInterpolationQuality, bool) + 46
7 libdispatch.dylib 0x00007fff63838583 _dispatch_call_block_and_release + 12
8 libdispatch.dylib 0x00007fff6383950e _dispatch_client_callout + 8
9 libdispatch.dylib 0x00007fff6383b6c0 _dispatch_continuation_pop + 414
10 libdispatch.dylib 0x00007fff6383adbe _dispatch_async_redirect_invoke + 703
11 libdispatch.dylib 0x00007fff638477e2 _dispatch_root_queue_drain + 326
12 libdispatch.dylib 0x00007fff63847f22 _dispatch_worker_thread2 + 92
13 libsystem_pthread.dylib 0x00007fff63a936b6 _pthread_wqthread + 220
14 libsystem_pthread.dylib 0x00007fff63a92827 start_wqthread + 15
Thread 31:
0 libsystem_pthread.dylib 0x00007fff63a92818 start_wqthread + 0
Thread 32:
0 libsystem_pthread.dylib 0x00007fff63a92818 start_wqthread + 0
Thread 33:
0 libsystem_pthread.dylib 0x00007fff63a92818 start_wqthread + 0
Thread 34:: Dispatch queue: TIconFetcher Group Queue: 38 nodes
0 libsystem_kernel.dylib 0x00007fff639d5bba __semwait_signal + 10
1 libsystem_c.dylib 0x00007fff639590fa nanosleep + 196
2 libsystem_c.dylib 0x00007fff63958ff4 usleep + 53
3 com.apple.FinderKit 0x00007fff47bf7d86 TQLThumbnailQueue::RunUntilDone() + 60
4 com.apple.FinderKit 0x00007fff47ba2326 TIconFetcher::FetchThumbnails() const + 746
5 libdispatch.dylib 0x00007fff63838583 _dispatch_call_block_and_release + 12
6 libdispatch.dylib 0x00007fff6383950e _dispatch_client_callout + 8
7 libdispatch.dylib 0x00007fff6383b738 _dispatch_continuation_pop + 534
8 libdispatch.dylib 0x00007fff6383adbe _dispatch_async_redirect_invoke + 703
9 libdispatch.dylib 0x00007fff638477e2 _dispatch_root_queue_drain + 326
10 libdispatch.dylib 0x00007fff63847f22 _dispatch_worker_thread2 + 92
11 libsystem_pthread.dylib 0x00007fff63a936b6 _pthread_wqthread + 220
12 libsystem_pthread.dylib 0x00007fff63a92827 start_wqthread + 15
Thread 35:
0 libsystem_pthread.dylib 0x00007fff63a92818 start_wqthread + 0
Thread 36:: Dispatch queue: TIconFetcher Base Queue: 38 nodes
0 libsystem_kernel.dylib 0x00007fff639d49be __ulock_wait + 10
1 libdispatch.dylib 0x00007fff63839cd6 _dlock_wait + 44
2 libdispatch.dylib 0x00007fff63839f61 _dispatch_group_wait_slow + 43
3 com.apple.FinderKit 0x00007fff47ba1601 TIconFetcher::Main() + 491
4 com.apple.FinderKit 0x00007fff47ba1f6a invocation function for block in TIconFetcher::Fetch() + 49
5 libdispatch.dylib 0x00007fff63838583 _dispatch_call_block_and_release + 12
6 libdispatch.dylib 0x00007fff6383950e _dispatch_client_callout + 8
7 libdispatch.dylib 0x00007fff6383eace _dispatch_lane_serial_drain + 597
8 libdispatch.dylib 0x00007fff6383f452 _dispatch_lane_invoke + 363
9 libdispatch.dylib 0x00007fff63848a9e _dispatch_workloop_worker_thread + 598
10 libsystem_pthread.dylib 0x00007fff63a936fc _pthread_wqthread + 290
11 libsystem_pthread.dylib 0x00007fff63a92827 start_wqthread + 15
Thread 37:
0 libsystem_pthread.dylib 0x00007fff63a92818 start_wqthread + 0
Thread 0 crashed with X86 Thread State (64-bit):
rax: 0x0000000000000000 rbx: 0x000000010fcf8dc0 rcx: 0x00007f9278087418 rdx: 0x0000000000000000
rdi: 0x0000000000000307 rsi: 0x000000000000000b rbp: 0x00007f9278087440 rsp: 0x00007f9278087418
r8: 0x00007f9278087f48 r9: 0xe080b7512de5aeab r10: 0x000000010fcf8dc0 r11: 0x0000000000000246
r12: 0x0000000000000307 r13: 0x00007fff62518000 r14: 0x000000000000000b r15: 0x0000000000000016
rip: 0x00007fff639d97fa rfl: 0x0000000000000246 cr2: 0x00007f92780868c0
Logical CPU: 0
Error Code: 0x02000148
Trap Number: 133
Binary Images:
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0x7fff639d2000 - 0x7fff639feff7 libsystem_kernel.dylib (6153.81.5) /usr/lib/system/libsystem_kernel.dylib
0x7fff639ff000 - 0x7fff63a46fcf libsystem_m.dylib (3178) /usr/lib/system/libsystem_m.dylib
0x7fff63a47000 - 0x7fff63a6efff libsystem_malloc.dylib (283.60.1) /usr/lib/system/libsystem_malloc.dylib
0x7fff63a6f000 - 0x7fff63a7cffb libsystem_networkextension.dylib (1095.60.2) /usr/lib/system/libsystem_networkextension.dylib
0x7fff63a7d000 - 0x7fff63a86ff3 libsystem_notify.dylib (241) /usr/lib/system/libsystem_notify.dylib
0x7fff63a87000 - 0x7fff63a90fef libsystem_platform.dylib (220) /usr/lib/system/libsystem_platform.dylib
0x7fff63a91000 - 0x7fff63a9bfff libsystem_pthread.dylib (416.60.2) /usr/lib/system/libsystem_pthread.dylib
0x7fff63a9c000 - 0x7fff63aa0fff libsystem_sandbox.dylib (1217.80.1) /usr/lib/system/libsystem_sandbox.dylib
0x7fff63aa1000 - 0x7fff63aa3fff libsystem_secinit.dylib (62.80.1) /usr/lib/system/libsystem_secinit.dylib
0x7fff63aa4000 - 0x7fff63aabffb libsystem_symptoms.dylib (1238.60.1) /usr/lib/system/libsystem_symptoms.dylib
0x7fff63aac000 - 0x7fff63ac2ff2 libsystem_trace.dylib (1147.80.3) /usr/lib/system/libsystem_trace.dylib
0x7fff63ac4000 - 0x7fff63ac9ffb libunwind.dylib (35.4) /usr/lib/system/libunwind.dylib
0x7fff63aca000 - 0x7fff63affffe libxpc.dylib (1738.80.8) /usr/lib/system/libxpc.dylib
External Modification Summary:
Calls made by other processes targeting this process:
task_for_pid: 0
thread_create: 0
thread_set_state: 0
Calls made by this process:
task_for_pid: 0
thread_create: 0
thread_set_state: 0
Calls made by all processes on this machine:
task_for_pid: 253683
thread_create: 0
thread_set_state: 0
VM Region Summary:
ReadOnly portion of Libraries: Total=954.8M resident=0K(0%) swapped_out_or_unallocated=954.8M(100%)
Writable regions: Total=2.8G written=0K(0%) resident=0K(0%) swapped_out=0K(0%) unallocated=2.8G(100%)
VIRTUAL REGION
REGION TYPE SIZE COUNT (non-coalesced)
=========== ======= =======
Accelerate framework 384K 3
Activity Tracing 256K 1
CG backing stores 65.9M 8
CG image 352K 5
CoreAnimation 116K 14
CoreGraphics 8K 1
CoreImage 24K 2
CoreUI image data 2036K 17
Foundation 4K 1
Kernel Alloc Once 8K 1
MALLOC 1.1G 127
MALLOC guard page 48K 10
MALLOC_MEDIUM (reserved) 792.0M 8 reserved VM address space (unallocated)
MALLOC_NANO (reserved) 384.0M 1 reserved VM address space (unallocated)
Memory Tag 242 12K 1
Memory Tag 251 16K 1
OpenGL GLSL 512K 6
PROTECTED_MEMORY 4K 1
STACK GUARD 148K 37
Stack 161.8M 38
Stack Guard 56.0M 1
VM_ALLOCATE 202.2M 258
VM_ALLOCATE (reserved) 160.0M 1 reserved VM address space (unallocated)
__DATA 76.5M 618
__DATA_CONST 149K 9
__FONT_DATA 4K 1
__GLSLBUILTINS 5176K 1
__LINKEDIT 373.4M 130
__OBJC_RO 32.0M 1
__OBJC_RW 1780K 2
__TEXT 581.4M 582
__UNICODE 564K 1
mapped file 85.1M 54
shared memory 672K 22
=========== ======= =======
TOTAL 4.0G 1964
TOTAL, minus reserved VM space 2.7G 1964
Log:
UCSF ChimeraX version: 0.93 (2020-03-14)
© 2016-2020 Regents of the University of California. All rights reserved.
How to cite UCSF ChimeraX
> open /Users/prashantsingh/Downloads/emd_10145.map
Opened emd_10145.map, grid size 432,432,432, pixel 0.822, shown at level
0.00542, step 2, values float32
OpenGL version: 4.1 ATI-3.5.5
OpenGL renderer: AMD Radeon Pro Vega 56 OpenGL Engine
OpenGL vendor: ATI Technologies Inc.
Change History (2)
comment:1 by , 6 years ago
| Component: | Unassigned → Input/Output |
|---|---|
| Owner: | set to |
| Platform: | → all |
| Project: | → ChimeraX |
| Status: | new → accepted |
| Summary: | ChimeraX bug report submission → File→Open crash |
comment:2 by , 6 years ago
| Resolution: | → duplicate |
|---|---|
| Status: | accepted → closed |
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Duplicate of #3005