Opened 6 years ago

Closed 6 years ago

#2861 closed defect (fixed)

Consecutive "view myname" commands only does first

Reported by: vadim.kotov@… Owned by: Tom Goddard
Priority: normal Milestone:
Component: Graphics Version:
Keywords: Cc:
Blocked By: Blocking:
Notify when closed: Platform: all
Project: ChimeraX

Description

The following bug report has been submitted:
Platform:        Linux-4.15.0-72-generic-x86_64-with-debian-stretch-sid
ChimeraX Version: 0.92 (2020-02-17)
Description
I would like to make a transition between two views in a movie (please see attached script). In my case, however, the second view is activated in the first frame without any transition happening. This issue occurs on both daily build (used to make the bug report) and production release. I would be happy to provide additional input or do more testing.
Many thanks!

Log:
UCSF ChimeraX version: 0.92 (2020-02-17)  
© 2016-2020 Regents of the University of California. All rights reserved.  
How to cite UCSF ChimeraX  

> open /home/kotov/Documents/200210_XylE_movie/bug.cxc

> movie record size 800,600

> open 4gby

Summary of feedback from opening 4gby fetched from pdb  
---  
warning | Unable to infer polymer connectivity due to unspecified label_seq_id
for residue "XYP" near line 4750  
  
4gby title:  
The structure of the MFS (major facilitator superfamily) proton:xylose
symporter XylE bound to D-xylose [more info...]  
  
Chain information for 4gby #1  
---  
Chain | Description  
A | D-xylose-proton symporter  
  
Non-standard residues in 4gby #1  
---  
BNG — B-nonylglucoside  
XYP — β-D-xylopyranose  
  
  

> view name overview

> view :xyp

> view name closeup

> view overview

> view closeup frames 30

> wait 30

> movie encode

Movie saved to /home/kotov/Desktop/movie.mp4  
  
executed bug.cxc  




OpenGL version: 3.3 (Core Profile) Mesa 18.0.5
OpenGL renderer: AMD RV710 (DRM 2.50.0 / 4.15.0-72-generic, LLVM 6.0.0)
OpenGL vendor: X.Org
File attachment: bug.cxc

bug.cxc

Attachments (1)

bug.cxc (141 bytes ) - added by vadim.kotov@… 6 years ago.
Added by email2trac

Download all attachments as: .zip

Change History (4)

by vadim.kotov@…, 6 years ago

Attachment: bug.cxc added

Added by email2trac

in reply to:  2 comment:1 by vadim.kotov@…, 6 years ago

Short follow-up:

  I did some more research and it seems that this only happens when the 
second view contains clipping, and the first one doesn't. If I tick 
"clip" in the Side view panel and then save view 1, then the transition 
works.


On 19/02/2020 10:44, ChimeraX wrote:

comment:2 by pett, 6 years ago

Component: UnassignedGraphics
Owner: set to Tom Goddard
Platform: all
Project: ChimeraX
Status: newassigned
Summary: ChimeraX bug report submissiontransition incorrect when views differ in clipping

comment:3 by Tom Goddard, 6 years ago

Resolution: fixed
Status: assignedclosed
Summary: transition incorrect when views differ in clippingConsecutive "view myname" commands only does first

Fixed.

The problem was not really related to clipping planes. It was that "view overview" followed by "view closeup frames 30" in a script only ran the second command. This was because the first command incorrectly did not act immediately instead waiting for the first drawn frame, and the second command also started at the first drawn frame. I made "view overview" act immediately.

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