Opened 6 years ago
Closed 6 years ago
#2850 closed defect (duplicate)
_openmm could not be found
| Reported by: | Owned by: | Tristan Croll | |
|---|---|---|---|
| Priority: | normal | Milestone: | |
| Component: | Third Party | Version: | |
| Keywords: | Cc: | Conrad Huang, Greg Couch | |
| Blocked By: | Blocking: | ||
| Notify when closed: | Platform: | all | |
| Project: | ChimeraX |
Description
The following bug report has been submitted:
Platform: Windows-10-10.0.18362
ChimeraX Version: 0.92 (2020-01-28)
Description
(Describe the actions that caused this problem to occur here)
Log:
Startup Messages
---
warning | 'clip' is a prefix of an existing command 'clipper'
UCSF ChimeraX version: 0.92 (2020-01-28)
© 2016-2020 Regents of the University of California. All rights reserved.
How to cite UCSF ChimeraX
> open E:\Nua4\NuA4-SS-good-2-coot-6.pdb
Chain information for NuA4-SS-good-2-coot-6.pdb #1
---
Chain | Description
A | No description available
B | No description available
C | No description available
E | No description available
F | No description available
G | No description available
H | No description available
> hide atoms
> show cartoons
> open E:/Nua4/cryosparc_P4_J134__localfilter.mrc
Opened cryosparc_P4_J134__localfilter.mrc, grid size 384,384,384, pixel 1.1,
shown at level 0.195, step 2, values float32
> toolshed show ISOLDE
Traceback (most recent call last):
File "D:\Program Files\ChimeraX\bin\lib\site-
packages\chimerax\core\toolshed\info.py", line 630, in start_tool
ti = api._api_caller.start_tool(api, session, self, tool_info)
File "D:\Program Files\ChimeraX\bin\lib\site-
packages\chimerax\core\toolshed\\__init__.py", line 1612, in start_tool
return cls._get_func(api, "start_tool")(session, ti.name)
File "C:\Users\alexa\AppData\Local\UCSF\ChimeraX\0.92\site-
packages\chimerax\isolde\\__init__.py", line 128, in start_tool
return tools.get_singleton(session, ISOLDE_ToolUI, 'ISOLDE', create=True)
File "D:\Program Files\ChimeraX\bin\lib\site-packages\chimerax\core\tools.py",
line 214, in get_singleton
tinst = tool_class(session, tool_name, **kw)
File "C:\Users\alexa\AppData\Local\UCSF\ChimeraX\0.92\site-
packages\chimerax\isolde\tool.py", line 183, in __init__
from . import isolde
File "C:\Users\alexa\AppData\Local\UCSF\ChimeraX\0.92\site-
packages\chimerax\isolde\isolde.py", line 30, in <module>
from .constants import defaults, sim_outcomes, control
File "C:\Users\alexa\AppData\Local\UCSF\ChimeraX\0.92\site-
packages\chimerax\isolde\constants.py", line 14, in <module>
from simtk.openmm import VariableLangevinIntegrator, CustomGBForce
File "D:\Program Files\ChimeraX\bin\lib\site-
packages\simtk\openmm\\__init__.py", line 19, in <module>
from simtk.openmm.openmm import *
File "D:\Program Files\ChimeraX\bin\lib\site-packages\simtk\openmm\openmm.py",
line 28, in <module>
_openmm = swig_import_helper()
File "D:\Program Files\ChimeraX\bin\lib\site-packages\simtk\openmm\openmm.py",
line 24, in swig_import_helper
_mod = imp.load_module('_openmm', fp, pathname, description)
File "D:\Program Files\ChimeraX\bin\lib\imp.py", line 242, in load_module
return load_dynamic(name, filename, file)
File "D:\Program Files\ChimeraX\bin\lib\imp.py", line 342, in load_dynamic
return _load(spec)
ImportError: DLL load failed: Le module spécifié est introuvable.
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "D:\Program Files\ChimeraX\bin\lib\site-packages\chimerax\ui\gui.py",
line 1331, in <lambda>
run(ses, "toolshed show %s" % StringArg.unparse(tool_name)))
File "D:\Program Files\ChimeraX\bin\lib\site-
packages\chimerax\core\commands\run.py", line 31, in run
results = command.run(text, log=log)
File "D:\Program Files\ChimeraX\bin\lib\site-
packages\chimerax\core\commands\cli.py", line 2837, in run
result = ci.function(session, **kw_args)
File "D:\Program Files\ChimeraX\bin\lib\site-
packages\chimerax\core\commands\toolshed.py", line 339, in toolshed_show
bi.start_tool(session, name)
File "D:\Program Files\ChimeraX\bin\lib\site-
packages\chimerax\core\toolshed\info.py", line 636, in start_tool
"start_tool() failed for tool %s in bundle %s:\n%s" % (tool_name, self.name,
str(e)))
chimerax.core.toolshed.ToolshedError: start_tool() failed for tool ISOLDE in
bundle ChimeraX-ISOLDE:
DLL load failed: Le module spécifié est introuvable.
chimerax.core.toolshed.ToolshedError: start_tool() failed for tool ISOLDE in
bundle ChimeraX-ISOLDE:
DLL load failed: Le module spécifié est introuvable.
File "D:\Program Files\ChimeraX\bin\lib\site-
packages\chimerax\core\toolshed\info.py", line 636, in start_tool
"start_tool() failed for tool %s in bundle %s:\n%s" % (tool_name, self.name,
str(e)))
See log for complete Python traceback.
OpenGL version: 3.3.0 NVIDIA 436.48
OpenGL renderer: GeForce RTX 2080/PCIe/SSE2
OpenGL vendor: NVIDIA Corporation
Change History (3)
comment:1 by , 6 years ago
| Cc: | added |
|---|---|
| Component: | Unassigned → Third Party |
| Owner: | set to |
| Platform: | → all |
| Project: | → ChimeraX |
| Status: | new → assigned |
| Summary: | ChimeraX bug report submission → _openmm could not be found |
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This looks like #2771.