![[ChimeraX Issue Tracking System]](/trac/ChimeraX/chrome/site/ChimeraX-icon.svg){kind=icon}
Opened 6 years ago
Closed 5 years ago
#2782 closed defect (fixed)
Some help files crash ChimeraX
| Reported by: | Tristan Croll | Owned by: | Greg Couch |
|---|---|---|---|
| Priority: | normal | Milestone: | |
| Component: | Help System | Version: | |
| Keywords: | Cc: | ||
| Blocked By: | Blocking: | ||
| Notify when closed: | Platform: | all | |
| Project: | ChimeraX |
Description
The following bug report has been submitted:
Platform: Darwin-18.7.0-x86_64-i386-64bit
ChimeraX Version: 0.92 (2020-01-24)
Description
Possibly the same as #2570: Intermittent segmentation fault on clicking the link to one of my help files (new commands added to an existing help file) after the command "usage isolde".
Happens only about 1 time in 3, and so far only when clicking the link actually loads the browser. Unlike the previous case, this time the offending anchors are quite a way down the page.
Last time you used ChimeraX it crashed.
Please describe steps that led to the crash here.
Process: ChimeraX [97790]
Path: /Applications/ChimeraX_Daily.app/Contents/MacOS/ChimeraX
Identifier: edu.ucsf.cgl.ChimeraX
Version: 0.92.0 (0.92.0.0)
Code Type: X86-64 (Native)
Parent Process: ??? [1]
Responsible: ChimeraX [97790]
User ID: 501
Date/Time: 2020-01-28 16:50:23.805 +0000
OS Version: Mac OS X 10.14.6 (18G95)
Report Version: 12
Anonymous UUID: 00AAD9F8-51E5-1AD5-41C6-BFA374922B68
Sleep/Wake UUID: F0EBDAB1-6422-4F41-9738-BC5A656FCBF5
Time Awake Since Boot: 1300000 seconds
Time Since Wake: 3300 seconds
System Integrity Protection: disabled
Crashed Thread: 0 CrBrowserMain Dispatch queue: com.apple.main-thread
Exception Type: EXC_BAD_ACCESS (SIGSEGV)
Exception Codes: EXC_I386_GPFLT
Exception Note: EXC_CORPSE_NOTIFY
Thread 0 Crashed:: CrBrowserMain Dispatch queue: com.apple.main-thread
0 libsystem_kernel.dylib 0x00007fff76ce42c6 __pthread_kill + 10
1 libsystem_pthread.dylib 0x00007fff76d9fbf1 pthread_kill + 284
2 libsystem_c.dylib 0x00007fff76c01d8a raise + 26
3 libsystem_platform.dylib 0x00007fff76d94b5d _sigtramp + 29
4 ??? 000000000000000000 0 + 0
5 QtWebEngineCore 0x0000000117564676 0x117536000 + 190070
6 QtWebEngineCore 0x0000000117563719 0x117536000 + 186137
7 QtWebEngineCore 0x0000000117553815 0x117536000 + 120853
8 QtQuick 0x000000011df14d8c QQuickWindowPrivate::updateDirtyNode(QQuickItem*) + 2908
9 QtQuick 0x000000011df040d9 QQuickWindowPrivate::updateDirtyNodes() + 1017
10 QtQuick 0x000000011df03acf QQuickWindowPrivate::syncSceneGraph() + 271
11 QtQuick 0x000000011dfd912c QQuickRenderControl::sync() + 28
12 QtQuickWidgets 0x000000011e8474aa 0x11e842000 + 21674
13 QtQuickWidgets 0x000000011e8475d8 0x11e842000 + 21976
14 QtCore 0x00000001168fff46 QObject::event(QEvent*) + 102
15 QtWidgets 0x0000000115c496da QWidget::event(QEvent*) + 4746
16 QtQuickWidgets 0x000000011e84b2ce QQuickWidget::event(QEvent*) + 782
17 QtWebEngineWidgets 0x000000011750e0c7 0x1174f3000 + 110791
18 QtWidgets 0x0000000115c0c76d QApplicationPrivate::notify_helper(QObject*, QEvent*) + 269
19 QtWidgets 0x0000000115c0db72 QApplication::notify(QObject*, QEvent*) + 594
20 QtWidgets.so 0x00000001157db3ca sipQApplication::notify(QObject*, QEvent*) + 234
21 QtCore 0x00000001168d67c4 QCoreApplication::notifyInternal2(QObject*, QEvent*) + 212
22 QtCore 0x000000011692fdcf QTimerInfoList::activateTimers() + 991
23 libqcocoa.dylib 0x00000001206bd4a2 0x120689000 + 214178
24 com.apple.CoreFoundation 0x00007fff4ac71683 __CFRUNLOOP_IS_CALLING_OUT_TO_A_SOURCE0_PERFORM_FUNCTION__ + 17
25 com.apple.CoreFoundation 0x00007fff4ac71629 __CFRunLoopDoSource0 + 108
26 com.apple.CoreFoundation 0x00007fff4ac54feb __CFRunLoopDoSources0 + 195
27 com.apple.CoreFoundation 0x00007fff4ac545b5 __CFRunLoopRun + 1189
28 com.apple.CoreFoundation 0x00007fff4ac53ebe CFRunLoopRunSpecific + 455
29 com.apple.HIToolbox 0x00007fff49eb31ab RunCurrentEventLoopInMode + 292
30 com.apple.HIToolbox 0x00007fff49eb2ee5 ReceiveNextEventCommon + 603
31 com.apple.HIToolbox 0x00007fff49eb2c76 _BlockUntilNextEventMatchingListInModeWithFilter + 64
32 com.apple.AppKit 0x00007fff4824b79d _DPSNextEvent + 1135
33 com.apple.AppKit 0x00007fff4824a48b -[NSApplication(NSEvent) _nextEventMatchingEventMask:untilDate:inMode:dequeue:] + 1361
34 com.apple.AppKit 0x00007fff482445a8 -[NSApplication run] + 699
35 libqcocoa.dylib 0x00000001206be253 0x120689000 + 217683
36 QtCore 0x00000001168d1ddf QEventLoop::exec(QFlags) + 431
37 QtCore 0x00000001168d6dd2 QCoreApplication::exec() + 130
38 QtWidgets.so 0x00000001158ca7d2 meth_QApplication_exec_(_object*, _object*) + 82
39 org.python.python 0x000000010cb6cedb _PyMethodDef_RawFastCallKeywords + 251
40 org.python.python 0x000000010cb6c3dc _PyCFunction_FastCallKeywords + 44
41 org.python.python 0x000000010cc35fc9 call_function + 617
42 org.python.python 0x000000010cc2e67a _PyEval_EvalFrameDefault + 5562
43 org.python.python 0x000000010cb6c893 function_code_fastcall + 195
44 org.python.python 0x000000010cc36031 call_function + 721
45 org.python.python 0x000000010cc2e67a _PyEval_EvalFrameDefault + 5562
46 org.python.python 0x000000010cc36c84 _PyEval_EvalCodeWithName + 2788
47 org.python.python 0x000000010cb6c396 _PyFunction_FastCallKeywords + 230
48 org.python.python 0x000000010cc36031 call_function + 721
49 org.python.python 0x000000010cc2e70b _PyEval_EvalFrameDefault + 5707
50 org.python.python 0x000000010cc36c84 _PyEval_EvalCodeWithName + 2788
51 org.python.python 0x000000010cc2d020 PyEval_EvalCode + 48
52 org.python.python 0x000000010cc2a683 builtin_exec + 563
53 org.python.python 0x000000010cb6d08e _PyMethodDef_RawFastCallKeywords + 686
54 org.python.python 0x000000010cb6c3dc _PyCFunction_FastCallKeywords + 44
55 org.python.python 0x000000010cc35fc9 call_function + 617
56 org.python.python 0x000000010cc2e70b _PyEval_EvalFrameDefault + 5707
57 org.python.python 0x000000010cc36c84 _PyEval_EvalCodeWithName + 2788
58 org.python.python 0x000000010cb6c396 _PyFunction_FastCallKeywords + 230
59 org.python.python 0x000000010cc36031 call_function + 721
60 org.python.python 0x000000010cc2e70b _PyEval_EvalFrameDefault + 5707
61 org.python.python 0x000000010cc36c84 _PyEval_EvalCodeWithName + 2788
62 org.python.python 0x000000010cb6be72 _PyFunction_FastCallDict + 450
63 org.python.python 0x000000010cc8b0e3 pymain_run_module + 147
64 org.python.python 0x000000010cc8a1a1 pymain_main + 5041
65 org.python.python 0x000000010cc88de3 Py_Main + 51
66 edu.ucsf.cgl.ChimeraX 0x000000010cb40dc8 main + 120
67 libdyld.dylib 0x00007fff76ba93d5 start + 1
Thread 1:
0 libsystem_pthread.dylib 0x00007fff76d9c3f0 start_wqthread + 0
Thread 2:
0 libsystem_pthread.dylib 0x00007fff76d9c3f0 start_wqthread + 0
Thread 3:: com.apple.NSEventThread
0 libsystem_kernel.dylib 0x00007fff76cde22a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff76cde76c mach_msg + 60
2 com.apple.CoreFoundation 0x00007fff4ac551ee __CFRunLoopServiceMachPort + 328
3 com.apple.CoreFoundation 0x00007fff4ac5475c __CFRunLoopRun + 1612
4 com.apple.CoreFoundation 0x00007fff4ac53ebe CFRunLoopRunSpecific + 455
5 com.apple.AppKit 0x00007fff482534c2 _NSEventThread + 175
6 libsystem_pthread.dylib 0x00007fff76d9d2eb _pthread_body + 126
7 libsystem_pthread.dylib 0x00007fff76da0249 _pthread_start + 66
8 libsystem_pthread.dylib 0x00007fff76d9c40d thread_start + 13
Thread 4:: NetworkConfigWatcher
0 libsystem_kernel.dylib 0x00007fff76cde22a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff76cde76c mach_msg + 60
2 QtWebEngineCore 0x00000001196e13ed 0x117536000 + 35304429
3 QtWebEngineCore 0x00000001196e12ef 0x117536000 + 35304175
4 QtWebEngineCore 0x000000011969511d 0x117536000 + 34992413
5 QtWebEngineCore 0x00000001196be145 0x117536000 + 35160389
6 QtWebEngineCore 0x0000000119710a7c 0x117536000 + 35498620
7 QtWebEngineCore 0x00000001197507c7 0x117536000 + 35760071
8 libsystem_pthread.dylib 0x00007fff76d9d2eb _pthread_body + 126
9 libsystem_pthread.dylib 0x00007fff76da0249 _pthread_start + 66
10 libsystem_pthread.dylib 0x00007fff76d9c40d thread_start + 13
Thread 5:: DnsConfigService
0 libsystem_kernel.dylib 0x00007fff76ce478e kevent + 10
1 QtWebEngineCore 0x00000001199a2a59 0x117536000 + 38193753
2 QtWebEngineCore 0x000000011999fd6d 0x117536000 + 38182253
3 QtWebEngineCore 0x0000000119756d8c 0x117536000 + 35786124
4 QtWebEngineCore 0x00000001196be145 0x117536000 + 35160389
5 QtWebEngineCore 0x0000000119710a7c 0x117536000 + 35498620
6 QtWebEngineCore 0x00000001197507c7 0x117536000 + 35760071
7 libsystem_pthread.dylib 0x00007fff76d9d2eb _pthread_body + 126
8 libsystem_pthread.dylib 0x00007fff76da0249 _pthread_start + 66
9 libsystem_pthread.dylib 0x00007fff76d9c40d thread_start + 13
Thread 6:: TaskSchedulerServiceThread
0 libsystem_kernel.dylib 0x00007fff76ce478e kevent + 10
1 QtWebEngineCore 0x00000001199a2a59 0x117536000 + 38193753
2 QtWebEngineCore 0x000000011999fd6d 0x117536000 + 38182253
3 QtWebEngineCore 0x0000000119756d74 0x117536000 + 35786100
4 QtWebEngineCore 0x00000001196be145 0x117536000 + 35160389
5 QtWebEngineCore 0x00000001196ffb34 0x117536000 + 35429172
6 QtWebEngineCore 0x0000000119710a7c 0x117536000 + 35498620
7 QtWebEngineCore 0x00000001197507c7 0x117536000 + 35760071
8 libsystem_pthread.dylib 0x00007fff76d9d2eb _pthread_body + 126
9 libsystem_pthread.dylib 0x00007fff76da0249 _pthread_start + 66
10 libsystem_pthread.dylib 0x00007fff76d9c40d thread_start + 13
Thread 7:: TaskSchedulerForegroundWorker
0 libsystem_kernel.dylib 0x00007fff76cde22a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff76cde76c mach_msg + 60
2 QtWebEngineCore 0x00000001196e13ed 0x117536000 + 35304429
3 QtWebEngineCore 0x00000001196e14e1 0x117536000 + 35304673
4 QtWebEngineCore 0x00000001196f8de8 0x117536000 + 35401192
5 QtWebEngineCore 0x00000001196f971b 0x117536000 + 35403547
6 QtWebEngineCore 0x00000001196f9384 0x117536000 + 35402628
7 QtWebEngineCore 0x00000001197507c7 0x117536000 + 35760071
8 libsystem_pthread.dylib 0x00007fff76d9d2eb _pthread_body + 126
9 libsystem_pthread.dylib 0x00007fff76da0249 _pthread_start + 66
10 libsystem_pthread.dylib 0x00007fff76d9c40d thread_start + 13
Thread 8:: TaskSchedulerForegroundBlockingWorker
0 libsystem_kernel.dylib 0x00007fff76cde22a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff76cde76c mach_msg + 60
2 QtWebEngineCore 0x00000001196e13ed 0x117536000 + 35304429
3 QtWebEngineCore 0x00000001196e14e1 0x117536000 + 35304673
4 QtWebEngineCore 0x00000001196f8de8 0x117536000 + 35401192
5 QtWebEngineCore 0x00000001196f971b 0x117536000 + 35403547
6 QtWebEngineCore 0x00000001196f9384 0x117536000 + 35402628
7 QtWebEngineCore 0x00000001197507c7 0x117536000 + 35760071
8 libsystem_pthread.dylib 0x00007fff76d9d2eb _pthread_body + 126
9 libsystem_pthread.dylib 0x00007fff76da0249 _pthread_start + 66
10 libsystem_pthread.dylib 0x00007fff76d9c40d thread_start + 13
Thread 9:: TaskSchedulerForegroundBlockingWorker
0 libsystem_kernel.dylib 0x00007fff76cde22a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff76cde76c mach_msg + 60
2 QtWebEngineCore 0x00000001196e13ed 0x117536000 + 35304429
3 QtWebEngineCore 0x00000001196e14e1 0x117536000 + 35304673
4 QtWebEngineCore 0x00000001196f8de8 0x117536000 + 35401192
5 QtWebEngineCore 0x00000001196f971b 0x117536000 + 35403547
6 QtWebEngineCore 0x00000001196f9384 0x117536000 + 35402628
7 QtWebEngineCore 0x00000001197507c7 0x117536000 + 35760071
8 libsystem_pthread.dylib 0x00007fff76d9d2eb _pthread_body + 126
9 libsystem_pthread.dylib 0x00007fff76da0249 _pthread_start + 66
10 libsystem_pthread.dylib 0x00007fff76d9c40d thread_start + 13
Thread 10:: TaskSchedulerForegroundBlockingWorker
0 libsystem_kernel.dylib 0x00007fff76cde22a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff76cde76c mach_msg + 60
2 QtWebEngineCore 0x00000001196e13ed 0x117536000 + 35304429
3 QtWebEngineCore 0x00000001196e14e1 0x117536000 + 35304673
4 QtWebEngineCore 0x00000001196f8de8 0x117536000 + 35401192
5 QtWebEngineCore 0x00000001196f971b 0x117536000 + 35403547
6 QtWebEngineCore 0x00000001196f9384 0x117536000 + 35402628
7 QtWebEngineCore 0x00000001197507c7 0x117536000 + 35760071
8 libsystem_pthread.dylib 0x00007fff76d9d2eb _pthread_body + 126
9 libsystem_pthread.dylib 0x00007fff76da0249 _pthread_start + 66
10 libsystem_pthread.dylib 0x00007fff76d9c40d thread_start + 13
Thread 11:: TaskSchedulerBackgroundWorker
0 libsystem_kernel.dylib 0x00007fff76cde22a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff76cde76c mach_msg + 60
2 QtWebEngineCore 0x00000001196e13ed 0x117536000 + 35304429
3 QtWebEngineCore 0x00000001196e14e1 0x117536000 + 35304673
4 QtWebEngineCore 0x00000001196f8de8 0x117536000 + 35401192
5 QtWebEngineCore 0x00000001196f971b 0x117536000 + 35403547
6 QtWebEngineCore 0x00000001196f92f4 0x117536000 + 35402484
7 QtWebEngineCore 0x00000001197507c7 0x117536000 + 35760071
8 libsystem_pthread.dylib 0x00007fff76d9d2eb _pthread_body + 126
9 libsystem_pthread.dylib 0x00007fff76da0249 _pthread_start + 66
10 libsystem_pthread.dylib 0x00007fff76d9c40d thread_start + 13
Thread 12:: TaskSchedulerBackgroundBlockingWorker
0 libsystem_kernel.dylib 0x00007fff76cde22a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff76cde76c mach_msg + 60
2 QtWebEngineCore 0x00000001196e13ed 0x117536000 + 35304429
3 QtWebEngineCore 0x00000001196e14e1 0x117536000 + 35304673
4 QtWebEngineCore 0x00000001196f8de8 0x117536000 + 35401192
5 QtWebEngineCore 0x00000001196f971b 0x117536000 + 35403547
6 QtWebEngineCore 0x00000001196f92f4 0x117536000 + 35402484
7 QtWebEngineCore 0x00000001197507c7 0x117536000 + 35760071
8 libsystem_pthread.dylib 0x00007fff76d9d2eb _pthread_body + 126
9 libsystem_pthread.dylib 0x00007fff76da0249 _pthread_start + 66
10 libsystem_pthread.dylib 0x00007fff76d9c40d thread_start + 13
Thread 13:: Chrome_IOThread
0 libsystem_kernel.dylib 0x00007fff76ce478e kevent + 10
1 QtWebEngineCore 0x00000001199a2a59 0x117536000 + 38193753
2 QtWebEngineCore 0x000000011999fd6d 0x117536000 + 38182253
3 QtWebEngineCore 0x0000000119756d74 0x117536000 + 35786100
4 QtWebEngineCore 0x00000001196be145 0x117536000 + 35160389
5 QtWebEngineCore 0x00000001190245d4 0x117536000 + 28239316
6 QtWebEngineCore 0x0000000119710a7c 0x117536000 + 35498620
7 QtWebEngineCore 0x00000001197507c7 0x117536000 + 35760071
8 libsystem_pthread.dylib 0x00007fff76d9d2eb _pthread_body + 126
9 libsystem_pthread.dylib 0x00007fff76da0249 _pthread_start + 66
10 libsystem_pthread.dylib 0x00007fff76d9c40d thread_start + 13
Thread 14:: TaskSchedulerSingleThreadSharedBackgroundBlocking0
0 libsystem_kernel.dylib 0x00007fff76cde22a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff76cde76c mach_msg + 60
2 QtWebEngineCore 0x00000001196e13ed 0x117536000 + 35304429
3 QtWebEngineCore 0x00000001196e12ef 0x117536000 + 35304175
4 QtWebEngineCore 0x00000001196f8dda 0x117536000 + 35401178
5 QtWebEngineCore 0x00000001196f947f 0x117536000 + 35402879
6 QtWebEngineCore 0x00000001196f9324 0x117536000 + 35402532
7 QtWebEngineCore 0x00000001197507c7 0x117536000 + 35760071
8 libsystem_pthread.dylib 0x00007fff76d9d2eb _pthread_body + 126
9 libsystem_pthread.dylib 0x00007fff76da0249 _pthread_start + 66
10 libsystem_pthread.dylib 0x00007fff76d9c40d thread_start + 13
Thread 15:: CompositorTileWorker1/74755
0 libsystem_kernel.dylib 0x00007fff76ce186a __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff76da056e _pthread_cond_wait + 722
2 QtWebEngineCore 0x000000011974f058 0x117536000 + 35754072
3 QtWebEngineCore 0x000000011a6d7658 0x117536000 + 52041304
4 QtWebEngineCore 0x000000011970f754 0x117536000 + 35493716
5 QtWebEngineCore 0x00000001197507c7 0x117536000 + 35760071
6 libsystem_pthread.dylib 0x00007fff76d9d2eb _pthread_body + 126
7 libsystem_pthread.dylib 0x00007fff76da0249 _pthread_start + 66
8 libsystem_pthread.dylib 0x00007fff76d9c40d thread_start + 13
Thread 16:: AudioThread
0 libsystem_kernel.dylib 0x00007fff76cde22a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff76cde76c mach_msg + 60
2 QtWebEngineCore 0x00000001196e13ed 0x117536000 + 35304429
3 QtWebEngineCore 0x00000001196e12ef 0x117536000 + 35304175
4 QtWebEngineCore 0x000000011969511d 0x117536000 + 34992413
5 QtWebEngineCore 0x00000001196be145 0x117536000 + 35160389
6 QtWebEngineCore 0x0000000119710a7c 0x117536000 + 35498620
7 QtWebEngineCore 0x00000001197507c7 0x117536000 + 35760071
8 libsystem_pthread.dylib 0x00007fff76d9d2eb _pthread_body + 126
9 libsystem_pthread.dylib 0x00007fff76da0249 _pthread_start + 66
10 libsystem_pthread.dylib 0x00007fff76d9c40d thread_start + 13
Thread 17:: NetworkConfigWatcher
0 libsystem_kernel.dylib 0x00007fff76cde22a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff76cde76c mach_msg + 60
2 QtWebEngineCore 0x00000001196e13ed 0x117536000 + 35304429
3 QtWebEngineCore 0x00000001196e12ef 0x117536000 + 35304175
4 QtWebEngineCore 0x000000011969511d 0x117536000 + 34992413
5 QtWebEngineCore 0x00000001196be145 0x117536000 + 35160389
6 QtWebEngineCore 0x0000000119710a7c 0x117536000 + 35498620
7 QtWebEngineCore 0x00000001197507c7 0x117536000 + 35760071
8 libsystem_pthread.dylib 0x00007fff76d9d2eb _pthread_body + 126
9 libsystem_pthread.dylib 0x00007fff76da0249 _pthread_start + 66
10 libsystem_pthread.dylib 0x00007fff76d9c40d thread_start + 13
Thread 18:: Chrome_InProcGpuThread
0 libsystem_kernel.dylib 0x00007fff76cde22a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff76cde76c mach_msg + 60
2 QtWebEngineCore 0x00000001196e13ed 0x117536000 + 35304429
3 QtWebEngineCore 0x0000000119695112 0x117536000 + 34992402
4 QtWebEngineCore 0x00000001196be145 0x117536000 + 35160389
5 QtWebEngineCore 0x0000000119710a7c 0x117536000 + 35498620
6 QtWebEngineCore 0x00000001197507c7 0x117536000 + 35760071
7 libsystem_pthread.dylib 0x00007fff76d9d2eb _pthread_body + 126
8 libsystem_pthread.dylib 0x00007fff76da0249 _pthread_start + 66
9 libsystem_pthread.dylib 0x00007fff76d9c40d thread_start + 13
Thread 19:: Chrome_ChildIOThread
0 libsystem_kernel.dylib 0x00007fff76ce478e kevent + 10
1 QtWebEngineCore 0x00000001199a2a59 0x117536000 + 38193753
2 QtWebEngineCore 0x000000011999fd6d 0x117536000 + 38182253
3 QtWebEngineCore 0x0000000119756d8c 0x117536000 + 35786124
4 QtWebEngineCore 0x00000001196be145 0x117536000 + 35160389
5 QtWebEngineCore 0x0000000119710a7c 0x117536000 + 35498620
6 QtWebEngineCore 0x00000001197507c7 0x117536000 + 35760071
7 libsystem_pthread.dylib 0x00007fff76d9d2eb _pthread_body + 126
8 libsystem_pthread.dylib 0x00007fff76da0249 _pthread_start + 66
9 libsystem_pthread.dylib 0x00007fff76d9c40d thread_start + 13
Thread 20:: TaskSchedulerSingleThreadForegroundBlocking1
0 libsystem_kernel.dylib 0x00007fff76cde22a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff76cde76c mach_msg + 60
2 QtWebEngineCore 0x00000001196e13ed 0x117536000 + 35304429
3 QtWebEngineCore 0x00000001196e12ef 0x117536000 + 35304175
4 QtWebEngineCore 0x00000001196f8dda 0x117536000 + 35401178
5 QtWebEngineCore 0x00000001196f971b 0x117536000 + 35403547
6 QtWebEngineCore 0x00000001196f93e4 0x117536000 + 35402724
7 QtWebEngineCore 0x00000001197507c7 0x117536000 + 35760071
8 libsystem_pthread.dylib 0x00007fff76d9d2eb _pthread_body + 126
9 libsystem_pthread.dylib 0x00007fff76da0249 _pthread_start + 66
10 libsystem_pthread.dylib 0x00007fff76d9c40d thread_start + 13
Thread 21:: QFileInfoGatherer
0 libsystem_kernel.dylib 0x00007fff76ce186a __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff76da056e _pthread_cond_wait + 722
2 QtCore 0x0000000116717c9b 0x1166ed000 + 175259
3 QtCore 0x0000000116717bfc QWaitCondition::wait(QMutex*, QDeadlineTimer) + 108
4 QtWidgets 0x0000000115e377a2 0x115bfc000 + 2340770
5 QtCore 0x000000011670f4a3 0x1166ed000 + 140451
6 libsystem_pthread.dylib 0x00007fff76d9d2eb _pthread_body + 126
7 libsystem_pthread.dylib 0x00007fff76da0249 _pthread_start + 66
8 libsystem_pthread.dylib 0x00007fff76d9c40d thread_start + 13
Thread 22:: NetworkConfigWatcher
0 libsystem_kernel.dylib 0x00007fff76cde22a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff76cde76c mach_msg + 60
2 QtWebEngineCore 0x00000001196e13ed 0x117536000 + 35304429
3 QtWebEngineCore 0x00000001196e12ef 0x117536000 + 35304175
4 QtWebEngineCore 0x000000011969511d 0x117536000 + 34992413
5 QtWebEngineCore 0x00000001196be145 0x117536000 + 35160389
6 QtWebEngineCore 0x0000000119710a7c 0x117536000 + 35498620
7 QtWebEngineCore 0x00000001197507c7 0x117536000 + 35760071
8 libsystem_pthread.dylib 0x00007fff76d9d2eb _pthread_body + 126
9 libsystem_pthread.dylib 0x00007fff76da0249 _pthread_start + 66
10 libsystem_pthread.dylib 0x00007fff76d9c40d thread_start + 13
Thread 23:: TaskSchedulerBackgroundBlockingWorker
0 libsystem_kernel.dylib 0x00007fff76cde22a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff76cde76c mach_msg + 60
2 QtWebEngineCore 0x00000001196e13ed 0x117536000 + 35304429
3 QtWebEngineCore 0x00000001196e14e1 0x117536000 + 35304673
4 QtWebEngineCore 0x00000001196f8de8 0x117536000 + 35401192
5 QtWebEngineCore 0x00000001196f971b 0x117536000 + 35403547
6 QtWebEngineCore 0x00000001196f92f4 0x117536000 + 35402484
7 QtWebEngineCore 0x00000001197507c7 0x117536000 + 35760071
8 libsystem_pthread.dylib 0x00007fff76d9d2eb _pthread_body + 126
9 libsystem_pthread.dylib 0x00007fff76da0249 _pthread_start + 66
10 libsystem_pthread.dylib 0x00007fff76d9c40d thread_start + 13
Thread 24:: TaskSchedulerForegroundWorker
0 libsystem_kernel.dylib 0x00007fff76cde22a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff76cde76c mach_msg + 60
2 QtWebEngineCore 0x00000001196e13ed 0x117536000 + 35304429
3 QtWebEngineCore 0x00000001196e14e1 0x117536000 + 35304673
4 QtWebEngineCore 0x00000001196f8de8 0x117536000 + 35401192
5 QtWebEngineCore 0x00000001196f947f 0x117536000 + 35402879
6 QtWebEngineCore 0x00000001196f9384 0x117536000 + 35402628
7 QtWebEngineCore 0x00000001197507c7 0x117536000 + 35760071
8 libsystem_pthread.dylib 0x00007fff76d9d2eb _pthread_body + 126
9 libsystem_pthread.dylib 0x00007fff76da0249 _pthread_start + 66
10 libsystem_pthread.dylib 0x00007fff76d9c40d thread_start + 13
Thread 25:: TaskSchedulerBackgroundBlockingWorker
0 libsystem_kernel.dylib 0x00007fff76cde22a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff76cde76c mach_msg + 60
2 QtWebEngineCore 0x00000001196e13ed 0x117536000 + 35304429
3 QtWebEngineCore 0x00000001196e14e1 0x117536000 + 35304673
4 QtWebEngineCore 0x00000001196f8de8 0x117536000 + 35401192
5 QtWebEngineCore 0x00000001196f971b 0x117536000 + 35403547
6 QtWebEngineCore 0x00000001196f92f4 0x117536000 + 35402484
7 QtWebEngineCore 0x00000001197507c7 0x117536000 + 35760071
8 libsystem_pthread.dylib 0x00007fff76d9d2eb _pthread_body + 126
9 libsystem_pthread.dylib 0x00007fff76da0249 _pthread_start + 66
10 libsystem_pthread.dylib 0x00007fff76d9c40d thread_start + 13
Thread 26:
0 libsystem_kernel.dylib 0x00007fff76ce186a __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff76da056e _pthread_cond_wait + 722
2 libopenblasp-r0.3.7.dylib 0x000000012fdfdc3b blas_thread_server + 619
3 libsystem_pthread.dylib 0x00007fff76d9d2eb _pthread_body + 126
4 libsystem_pthread.dylib 0x00007fff76da0249 _pthread_start + 66
5 libsystem_pthread.dylib 0x00007fff76d9c40d thread_start + 13
Thread 27:
0 libsystem_pthread.dylib 0x00007fff76d9c3f0 start_wqthread + 0
Thread 28:
0 libsystem_pthread.dylib 0x00007fff76d9c3f0 start_wqthread + 0
Thread 29:
0 libsystem_pthread.dylib 0x00007fff76d9c3f0 start_wqthread + 0
Thread 30:
0 libsystem_pthread.dylib 0x00007fff76d9c3f0 start_wqthread + 0
Thread 31:: TaskSchedulerForegroundBlockingWorker
0 libsystem_kernel.dylib 0x00007fff76cde22a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff76cde76c mach_msg + 60
2 QtWebEngineCore 0x00000001196e13ed 0x117536000 + 35304429
3 QtWebEngineCore 0x00000001196e14e1 0x117536000 + 35304673
4 QtWebEngineCore 0x00000001196f8de8 0x117536000 + 35401192
5 QtWebEngineCore 0x00000001196f947f 0x117536000 + 35402879
6 QtWebEngineCore 0x00000001196f9384 0x117536000 + 35402628
7 QtWebEngineCore 0x00000001197507c7 0x117536000 + 35760071
8 libsystem_pthread.dylib 0x00007fff76d9d2eb _pthread_body + 126
9 libsystem_pthread.dylib 0x00007fff76da0249 _pthread_start + 66
10 libsystem_pthread.dylib 0x00007fff76d9c40d thread_start + 13
Thread 32:: NetworkConfigWatcher
0 libsystem_kernel.dylib 0x00007fff76cde22a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff76cde76c mach_msg + 60
2 QtWebEngineCore 0x00000001196e13ed 0x117536000 + 35304429
3 QtWebEngineCore 0x0000000119695112 0x117536000 + 34992402
4 QtWebEngineCore 0x00000001196be145 0x117536000 + 35160389
5 QtWebEngineCore 0x0000000119710a7c 0x117536000 + 35498620
6 QtWebEngineCore 0x00000001197507c7 0x117536000 + 35760071
7 libsystem_pthread.dylib 0x00007fff76d9d2eb _pthread_body + 126
8 libsystem_pthread.dylib 0x00007fff76da0249 _pthread_start + 66
9 libsystem_pthread.dylib 0x00007fff76d9c40d thread_start + 13
Thread 0 crashed with X86 Thread State (64-bit):
rax: 0x0000000000000000 rbx: 0x00000001118c45c0 rcx: 0x000000010cfb3a48 rdx: 0x0000000000000000
rdi: 0x0000000000000307 rsi: 0x000000000000000b rbp: 0x000000010cfb3a80 rsp: 0x000000010cfb3a48
r8: 0x000000010cfb3f48 r9: 0x22acf811e48f02ae r10: 0x00000001118c466c r11: 0x0000000000000287
r12: 0x0000000000000307 r13: 0x0000000000000000 r14: 0x000000000000000b r15: 0x000000000000002d
rip: 0x00007fff76ce42c6 rfl: 0x0000000000000286 cr2: 0x000000010cd95124
Logical CPU: 0
Error Code: 0x02000148
Trap Number: 133
Binary Images:
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0x7fff73b90000 - 0x7fff73b91ffb libSystem.B.dylib (1252.250.1) /usr/lib/libSystem.B.dylib
0x7fff73c0d000 - 0x7fff73c0efff libThaiTokenizer.dylib (2.15.1) /usr/lib/libThaiTokenizer.dylib
0x7fff73c20000 - 0x7fff73c36ffb libapple_nghttp2.dylib (1.24.1) /usr/lib/libapple_nghttp2.dylib
0x7fff73c37000 - 0x7fff73c60ffb libarchive.2.dylib (54.250.1) /usr/lib/libarchive.2.dylib
0x7fff73c61000 - 0x7fff73ce0fff libate.dylib (1.13.8) /usr/lib/libate.dylib
0x7fff73ce4000 - 0x7fff73ce4ff3 libauto.dylib (187) /usr/lib/libauto.dylib
0x7fff73db4000 - 0x7fff73dc4ffb libbsm.0.dylib (39.200.18) /usr/lib/libbsm.0.dylib
0x7fff73dc5000 - 0x7fff73dd2fff libbz2.1.0.dylib (38.200.3) /usr/lib/libbz2.1.0.dylib
0x7fff73dd3000 - 0x7fff73e26ff7 libc++.1.dylib (400.9.4) /usr/lib/libc++.1.dylib
0x7fff73e27000 - 0x7fff73e3cff7 libc++abi.dylib (400.17) /usr/lib/libc++abi.dylib
0x7fff73e3d000 - 0x7fff73e3dff3 libcharset.1.dylib (51.200.6) /usr/lib/libcharset.1.dylib
0x7fff73e3e000 - 0x7fff73e4effb libcmph.dylib (6.15.1) /usr/lib/libcmph.dylib
0x7fff73e4f000 - 0x7fff73e67ffb libcompression.dylib (52.250.2) /usr/lib/libcompression.dylib
0x7fff740dc000 - 0x7fff740f2fff libcoretls.dylib (155.220.1) /usr/lib/libcoretls.dylib
0x7fff740f3000 - 0x7fff740f4ff3 libcoretls_cfhelpers.dylib (155.220.1) /usr/lib/libcoretls_cfhelpers.dylib
0x7fff74292000 - 0x7fff7438aff7 libcrypto.35.dylib (22.260.1) /usr/lib/libcrypto.35.dylib
0x7fff7458d000 - 0x7fff74598ff7 libcsfde.dylib (546.50.1) /usr/lib/libcsfde.dylib
0x7fff745a0000 - 0x7fff745f6ff3 libcups.2.dylib (462.12) /usr/lib/libcups.2.dylib
0x7fff7472a000 - 0x7fff7472afff libenergytrace.dylib (17.200.1) /usr/lib/libenergytrace.dylib
0x7fff7472b000 - 0x7fff74744ffb libexpat.1.dylib (16.1.1) /usr/lib/libexpat.1.dylib
0x7fff7475c000 - 0x7fff74761ff7 libgermantok.dylib (17.15.2) /usr/lib/libgermantok.dylib
0x7fff74762000 - 0x7fff74767ff7 libheimdal-asn1.dylib (520.270.1) /usr/lib/libheimdal-asn1.dylib
0x7fff74792000 - 0x7fff74882fff libiconv.2.dylib (51.200.6) /usr/lib/libiconv.2.dylib
0x7fff74883000 - 0x7fff74ae4ffb libicucore.A.dylib (62141.0.1) /usr/lib/libicucore.A.dylib
0x7fff74b31000 - 0x7fff74b32fff liblangid.dylib (128.15.1) /usr/lib/liblangid.dylib
0x7fff74b33000 - 0x7fff74b4bff3 liblzma.5.dylib (10.200.3) /usr/lib/liblzma.5.dylib
0x7fff74b63000 - 0x7fff74c07ff7 libmecab.1.0.0.dylib (779.24.1) /usr/lib/libmecab.1.0.0.dylib
0x7fff74c08000 - 0x7fff74e0cfff libmecabra.dylib (779.24.1) /usr/lib/libmecabra.dylib
0x7fff74fe4000 - 0x7fff75335ff7 libnetwork.dylib (1229.250.15) /usr/lib/libnetwork.dylib
0x7fff753c7000 - 0x7fff75b4cfdf libobjc.A.dylib (756.2) /usr/lib/libobjc.A.dylib
0x7fff75b5e000 - 0x7fff75b62ffb libpam.2.dylib (22.200.1) /usr/lib/libpam.2.dylib
0x7fff75b65000 - 0x7fff75b9afff libpcap.A.dylib (79.250.1) /usr/lib/libpcap.A.dylib
0x7fff75cb3000 - 0x7fff75ccbffb libresolv.9.dylib (65.200.2) /usr/lib/libresolv.9.dylib
0x7fff75ccd000 - 0x7fff75d08ff3 libsandbox.1.dylib (851.270.1) /usr/lib/libsandbox.1.dylib
0x7fff75d1c000 - 0x7fff75d1dff7 libspindump.dylib (267.3) /usr/lib/libspindump.dylib
0x7fff75d1e000 - 0x7fff75efbfff libsqlite3.dylib (274.26) /usr/lib/libsqlite3.dylib
0x7fff76114000 - 0x7fff76117ff7 libutil.dylib (51.200.4) /usr/lib/libutil.dylib
0x7fff76118000 - 0x7fff76125fff libxar.1.dylib (417.1) /usr/lib/libxar.1.dylib
0x7fff7612a000 - 0x7fff7620cff3 libxml2.2.dylib (32.10) /usr/lib/libxml2.2.dylib
0x7fff7620d000 - 0x7fff76235ff3 libxslt.1.dylib (16.5) /usr/lib/libxslt.1.dylib
0x7fff76236000 - 0x7fff76248ff7 libz.1.dylib (70.200.4) /usr/lib/libz.1.dylib
0x7fff76a2c000 - 0x7fff76a30ff3 libcache.dylib (81) /usr/lib/system/libcache.dylib
0x7fff76a31000 - 0x7fff76a3bff3 libcommonCrypto.dylib (60118.250.2) /usr/lib/system/libcommonCrypto.dylib
0x7fff76a3c000 - 0x7fff76a43ff7 libcompiler_rt.dylib (63.4) /usr/lib/system/libcompiler_rt.dylib
0x7fff76a44000 - 0x7fff76a4dff7 libcopyfile.dylib (146.250.1) /usr/lib/system/libcopyfile.dylib
0x7fff76a4e000 - 0x7fff76ad2fc3 libcorecrypto.dylib (602.260.2) /usr/lib/system/libcorecrypto.dylib
0x7fff76b59000 - 0x7fff76b92ff7 libdispatch.dylib (1008.270.1) /usr/lib/system/libdispatch.dylib
0x7fff76b93000 - 0x7fff76bbfff7 libdyld.dylib (655.1.1) /usr/lib/system/libdyld.dylib
0x7fff76bc0000 - 0x7fff76bc0ffb libkeymgr.dylib (30) /usr/lib/system/libkeymgr.dylib
0x7fff76bc1000 - 0x7fff76bcdff3 libkxld.dylib (4903.271.2) /usr/lib/system/libkxld.dylib
0x7fff76bce000 - 0x7fff76bceff7 liblaunch.dylib (1336.261.2) /usr/lib/system/liblaunch.dylib
0x7fff76bcf000 - 0x7fff76bd4fff libmacho.dylib (927.0.3) /usr/lib/system/libmacho.dylib
0x7fff76bd5000 - 0x7fff76bd7ffb libquarantine.dylib (86.220.1) /usr/lib/system/libquarantine.dylib
0x7fff76bd8000 - 0x7fff76bd9ff7 libremovefile.dylib (45.200.2) /usr/lib/system/libremovefile.dylib
0x7fff76bda000 - 0x7fff76bf1ff3 libsystem_asl.dylib (356.200.4) /usr/lib/system/libsystem_asl.dylib
0x7fff76bf2000 - 0x7fff76bf2ff7 libsystem_blocks.dylib (73) /usr/lib/system/libsystem_blocks.dylib
0x7fff76bf3000 - 0x7fff76c7afff libsystem_c.dylib (1272.250.1) /usr/lib/system/libsystem_c.dylib
0x7fff76c7b000 - 0x7fff76c7effb libsystem_configuration.dylib (963.270.3) /usr/lib/system/libsystem_configuration.dylib
0x7fff76c7f000 - 0x7fff76c82ff7 libsystem_coreservices.dylib (66) /usr/lib/system/libsystem_coreservices.dylib
0x7fff76c83000 - 0x7fff76c89fff libsystem_darwin.dylib (1272.250.1) /usr/lib/system/libsystem_darwin.dylib
0x7fff76c8a000 - 0x7fff76c90ff7 libsystem_dnssd.dylib (878.270.2) /usr/lib/system/libsystem_dnssd.dylib
0x7fff76c91000 - 0x7fff76cdcffb libsystem_info.dylib (517.200.9) /usr/lib/system/libsystem_info.dylib
0x7fff76cdd000 - 0x7fff76d05ff7 libsystem_kernel.dylib (4903.271.2) /usr/lib/system/libsystem_kernel.dylib
0x7fff76d06000 - 0x7fff76d51ff7 libsystem_m.dylib (3158.200.7) /usr/lib/system/libsystem_m.dylib
0x7fff76d52000 - 0x7fff76d7cfff libsystem_malloc.dylib (166.270.1) /usr/lib/system/libsystem_malloc.dylib
0x7fff76d7d000 - 0x7fff76d87ff7 libsystem_networkextension.dylib (767.250.2) /usr/lib/system/libsystem_networkextension.dylib
0x7fff76d88000 - 0x7fff76d8ffff libsystem_notify.dylib (172.200.21) /usr/lib/system/libsystem_notify.dylib
0x7fff76d90000 - 0x7fff76d99fef libsystem_platform.dylib (177.270.1) /usr/lib/system/libsystem_platform.dylib
0x7fff76d9a000 - 0x7fff76da4ff7 libsystem_pthread.dylib (330.250.2) /usr/lib/system/libsystem_pthread.dylib
0x7fff76da5000 - 0x7fff76da8ff7 libsystem_sandbox.dylib (851.270.1) /usr/lib/system/libsystem_sandbox.dylib
0x7fff76da9000 - 0x7fff76dabff3 libsystem_secinit.dylib (30.260.2) /usr/lib/system/libsystem_secinit.dylib
0x7fff76dac000 - 0x7fff76db3ff3 libsystem_symptoms.dylib (820.267.1) /usr/lib/system/libsystem_symptoms.dylib
0x7fff76db4000 - 0x7fff76dc9fff libsystem_trace.dylib (906.260.1) /usr/lib/system/libsystem_trace.dylib
0x7fff76dcb000 - 0x7fff76dd0ffb libunwind.dylib (35.4) /usr/lib/system/libunwind.dylib
0x7fff76dd1000 - 0x7fff76e00fff libxpc.dylib (1336.261.2) /usr/lib/system/libxpc.dylib
External Modification Summary:
Calls made by other processes targeting this process:
task_for_pid: 8
thread_create: 0
thread_set_state: 0
Calls made by this process:
task_for_pid: 0
thread_create: 0
thread_set_state: 0
Calls made by all processes on this machine:
task_for_pid: 77810070
thread_create: 0
thread_set_state: 378
VM Region Summary:
ReadOnly portion of Libraries: Total=762.9M resident=0K(0%) swapped_out_or_unallocated=762.9M(100%)
Writable regions: Total=967.2M written=0K(0%) resident=0K(0%) swapped_out=0K(0%) unallocated=967.2M(100%)
VIRTUAL REGION
REGION TYPE SIZE COUNT (non-coalesced)
=========== ======= =======
Accelerate framework 128K 1
Activity Tracing 256K 1
CG backing stores 8348K 5
CG image 68K 11
CoreAnimation 80K 9
CoreGraphics 8K 1
CoreImage 8K 2
CoreUI image data 920K 15
CoreUI image file 196K 3
Foundation 4K 1
Kernel Alloc Once 8K 1
MALLOC 247.9M 132
MALLOC guard page 32K 7
MALLOC_LARGE (reserved) 384K 1 reserved VM address space (unallocated)
MALLOC_NANO (reserved) 384.0M 1 reserved VM address space (unallocated)
Memory Tag 242 12K 1
OpenGL GLSL 512K 6
PROTECTED_MEMORY 4K 1
STACK GUARD 128K 32
Stack 196.8M 33
Stack Guard 56.0M 1
VM_ALLOCATE 62.4M 167
VM_ALLOCATE (reserved) 64.0M 2 reserved VM address space (unallocated)
__DATA 45.3M 529
__FONT_DATA 4K 1
__GLSLBUILTINS 5176K 1
__LINKEDIT 251.4M 182
__TEXT 511.4M 489
__UNICODE 564K 1
mapped file 77.1M 38
shared memory 2692K 13
=========== ======= =======
TOTAL 1.9G 1688
TOTAL, minus reserved VM space 1.4G 1688
Log:
Startup Messages
---
warning | 'clip' is a prefix of an existing command 'clipper'
UCSF ChimeraX version: 0.92 (2020-01-24)
© 2016-2020 Regents of the University of California. All rights reserved.
How to cite UCSF ChimeraX
OpenGL version: 4.1 INTEL-12.10.12
OpenGL renderer: Intel(R) HD Graphics 6000
OpenGL vendor: Intel Inc.
Attachments (2)
Change History (6)
comment:2 by , 6 years ago
| Component: | Unassigned → Help System |
|---|---|
| Owner: | set to |
| Platform: | → all |
| Project: | → ChimeraX |
| Status: | new → assigned |
| Summary: | ChimeraX bug report submission → Some help files crash ChimeraX |
Follow up to #2570
comment:3 by , 6 years ago
Can't reproduce in Windows (today's build). On 2020-01-28 18:55, ChimeraX wrote:
comment:4 by , 5 years ago
| Resolution: | → fixed |
|---|---|
| Status: | assigned → closed |
Unable to reproduce with daily build (Qt 5.12.8).
Note:
See TracTickets
for help on using tickets.
OK, looks like it *is* the same as #2570 (but notably on the Mac
platform rather than Linux). In the attached HTML (generated by Sphinx),
attempting to load the first four anchors (#tutorial, #demo, #start,
#set) reliably causes the crash, but the fifth (#report) is safe. Seems
pretty clearly a Qt bug.
isolde.html
isolde-1.html