Opened 6 years ago
Closed 6 years ago
#2759 closed defect (can't reproduce)
(corrupted stack?) crash
| Reported by: | Owned by: | Tom Goddard | |
|---|---|---|---|
| Priority: | normal | Milestone: | |
| Component: | Core | Version: | |
| Keywords: | Cc: | ||
| Blocked By: | Blocking: | ||
| Notify when closed: | Platform: | all | |
| Project: | ChimeraX |
Description
The following bug report has been submitted:
Platform: Darwin-19.2.0-x86_64-i386-64bit
ChimeraX Version: 0.91 (2019-09-10)
Description
Last time you used ChimeraX it crashed.
Please describe steps that led to the crash here.
Process: ChimeraX [13727]
Path: /private/var/folders/*/ChimeraX_Daily.app/Contents/MacOS/ChimeraX
Identifier: edu.ucsf.cgl.ChimeraX
Version: 0.91.0 (0.91.0.0)
Code Type: X86-64 (Native)
Parent Process: ??? [1]
Responsible: ChimeraX [13727]
User ID: 501
Date/Time: 2020-01-16 21:20:46.560 -0500
OS Version: Mac OS X 10.15.2 (19C57)
Report Version: 12
Anonymous UUID: 4F871D3C-1294-7F9F-A891-82A884BB9E95
Sleep/Wake UUID: 64EC460F-1B27-4F36-91FB-01D57DF8E879
Time Awake Since Boot: 230000 seconds
Time Since Wake: 620 seconds
System Integrity Protection: enabled
Crashed Thread: 0
Exception Type: EXC_BAD_ACCESS (SIGILL)
Exception Codes: KERN_MEMORY_ERROR at 0x0000000104665140
Exception Note: EXC_CORPSE_NOTIFY
Termination Signal: Illegal instruction: 4
Termination Reason: Namespace SIGNAL, Code 0x4
Terminating Process: ChimeraX [13727]
VM Regions Near 0x104665140:
MALLOC metadata 00000001044dc000-00000001044dd000 [ 4K] rw-/rwx SM=PRV
--> mapped file 00000001044dd000-00000001046c3000 [ 1944K] r-x/rwx SM=COW Object_id=87b86ac9
mapped file 00000001046c3000-0000000104728000 [ 404K] rw-/rwx SM=COW Object_id=93dd49c9
Thread 0 Crashed:
0 ??? 0x0000000104665140 0 + 4368781632
1 ??? 0x4004280040042800 0 + 4612855899873355776
2 ??? 0x0000009200000091 0 + 627065225361
3 ??? 0x000000c6000000c5 0 + 850403524805
4 ??? 0x000009c8000009c7 0 + 10754598111687
5 ChimeraX 000000000000000000 0 + 0
6 ChimeraX 000000000000000000 0 + 0
7 ??? 0x0000130e000012f0 0 + 20950850474736
8 ??? 0x000000010483bcbc 0 + 4370709692
9 ??? 0x0000000080042800 0 + 2147756032
10 ??? 0x00010af600010aeb 0 + 293526655011563
11 ChimeraX 000000000000000000 0 + 0
12 ??? 0x0000000000040800 0 + 264192
13 ??? 0x0001ee620001ee61 0 + 543579651042913
14 ChimeraX 000000000000000000 0 + 0
15 ??? 0x0000000000000175 0 + 373
16 ??? 0x000001e4000001e4 0 + 2078764171748
17 ChimeraX 000000000000000000 0 + 0
18 ??? 0x00000000000004d1 0 + 1233
19 ??? 0x00001e3600001e36 0 + 33217277074998
20 ChimeraX 000000000000000000 0 + 0
21 ??? 0x0000000000001fe0 0 + 8160
22 ??? 0x0000015b0000015b 0 + 1490353652059
23 ChimeraX 000000000000000000 0 + 0
24 ??? 0x0000000000000388 0 + 904
25 ??? 0x000004a3000004a3 0 + 5098126181539
26 ChimeraX 000000000000000000 0 + 0
27 ??? 0x0000000000001e7a 0 + 7802
28 ??? 0x00001ef500001ef5 0 + 34037615828725
29 ??? 0x4004890040041900 0 + 4612962552501246208
30 ??? 0x4004280040042800 0 + 4612855899873355776
31 ??? 0x4004890040041900 0 + 4612962552501246208
32 ??? 0x4004080040040800 0 + 4612820715501258752
33 ??? 0x4024080040240800 0 + 4621827914758096896
34 ??? 0x4024080040240800 0 + 4621827914758096896
35 ??? 0x4004080040040800 0 + 4612820715501258752
36 ??? 0x4004190040048900 0 + 4612839407198963968
37 ??? 0x4004280040042800 0 + 4612855899873355776
38 ??? 0x4004280040042800 0 + 4612855899873355776
39 ??? 0x4004280040042800 0 + 4612855899873355776
40 ??? 0x8004080080042800 0 + 9224506735002396672
41 ??? 0x8014080080140800 0 + 9229010334630807552
42 ??? 0x4004000040040000 0 + 4612811919408234496
43 ??? 0x4004000040040000 0 + 4612811919408234496
44 ??? 0x4004000040040000 0 + 4612811919408234496
45 ??? 0x4004000040040000 0 + 4612811919408234496
46 ??? 0x4004000040040000 0 + 4612811919408234496
47 ??? 0x4004000040040000 0 + 4612811919408234496
48 ??? 0x4004080040040800 0 + 4612820715501258752
49 ??? 0x4004080040040800 0 + 4612820715501258752
50 ??? 0x4004080040040800 0 + 4612820715501258752
51 ??? 0x4004080040040800 0 + 4612820715501258752
52 ??? 0x4004080040040800 0 + 4612820715501258752
53 ??? 0x4004080040040800 0 + 4612820715501258752
54 ??? 0x4004080040040800 0 + 4612820715501258752
55 ??? 0x4004080040040800 0 + 4612820715501258752
56 ??? 0x4004080040040800 0 + 4612820715501258752
57 ??? 0x4004080040040800 0 + 4612820715501258752
58 ??? 0x4004080040040800 0 + 4612820715501258752
59 ??? 0x4004080040040800 0 + 4612820715501258752
60 ??? 0x4004080040040800 0 + 4612820715501258752
61 ??? 0x4004080040040800 0 + 4612820715501258752
62 ??? 0x4004080040040800 0 + 4612820715501258752
63 ??? 0x4004080040040800 0 + 4612820715501258752
64 ??? 0x4004080040040800 0 + 4612820715501258752
65 ??? 0x4004080040040800 0 + 4612820715501258752
66 ??? 0x4004080040040800 0 + 4612820715501258752
67 ??? 0x800c0800800c0800 0 + 9226758534816598016
68 ??? 0x4004080040040800 0 + 4612820715501258752
69 ??? 0x4004080040040800 0 + 4612820715501258752
70 ??? 0x2004080020040800 0 + 2306977705750693888
71 ??? 0x4004190040041900 0 + 4612839407198935296
72 ??? 0x4004890040048900 0 + 4612962552501274880
73 ??? 0x4004080040040800 0 + 4612820715501258752
74 ??? 0x8004280080042800 0 + 9224541919374485504
75 ??? 0x8004280080042800 0 + 9224541919374485504
76 ??? 0x8004280080042800 0 + 9224541919374485504
Thread 1:
0 ??? 0x00007fff700eece6 0 + 140735073414374
1 ??? 0x0000000105dcdc0b 0 + 4393327627
2 ??? 0x00007fff701afe65 0 + 140735074205285
3 ??? 0x00007fff701ab83b 0 + 140735074187323
Thread 2:: com.apple.NSEventThread
0 ??? 0x00007fff700ec25a 0 + 140735073403482
1 ??? 0x00007fff700ec5d0 0 + 140735073404368
2 ??? 0x00007fff38950d0b 0 + 140734142680331
3 ??? 0x00007fff3894f8e7 0 + 140734142675175
4 ??? 0x00007fff3894ebd3 0 + 140734142671827
5 ??? 0x00007fff35cb9a72 0 + 140734095923826
6 ??? 0x00007fff701afe65 0 + 140735074205285
7 ??? 0x00007fff701ab83b 0 + 140735074187323
Thread 3:
0 ??? 0x00007fff701ab818 0 + 140735074187288
Thread 0 crashed with X86 Thread State (64-bit):
rax: 0x0000000104665140 rbx: 0x000000010482f620 rcx: 0x000000010482f5b8 rdx: 0x000000010482f620
rdi: 0x000000000000000a rsi: 0x000000010482f5b8 rbp: 0x000000010482f190 rsp: 0x000000010482f188
r8: 0x000000010482f620 r9: 0x5d92855a9c7ac8c4 r10: 0x0000600001c75b10 r11: 0x0000600001c75b08
r12: 0x5d92855a9c7ac8c4 r13: 0x0000000000000040 r14: 0x0000000000000000 r15: 0x000000011806fd60
rip: 0x0000000104665140 rfl: 0x0000000000010206 cr2: 0x0000000104665140
Logical CPU: 2
Error Code: 0x00000014 (no mapping for user instruction write)
Trap Number: 14
Binary Images:
0 - 0xffffffffffffffff +ChimeraX (???) /private/var/folders/*/ChimeraX_Daily.app/Contents/MacOS/ChimeraX
0x10c566000 - 0x10c5f6cb7 dyld (733.8) /usr/lib/dyld
External Modification Summary:
Calls made by other processes targeting this process:
task_for_pid: 1
thread_create: 0
thread_set_state: 0
Calls made by this process:
task_for_pid: 0
thread_create: 0
thread_set_state: 0
Calls made by all processes on this machine:
task_for_pid: 158706
thread_create: 0
thread_set_state: 0
VM Region Summary:
ReadOnly portion of Libraries: Total=804K resident=0K(0%) swapped_out_or_unallocated=804K(100%)
Writable regions: Total=663.5M written=0K(0%) resident=0K(0%) swapped_out=0K(0%) unallocated=663.5M(100%)
VIRTUAL REGION
REGION TYPE SIZE COUNT (non-coalesced)
=========== ======= =======
Accelerate framework 384K 3
Activity Tracing 256K 1
CG backing stores 2192K 4
CG image 44K 4
CoreAnimation 32K 7
CoreGraphics 8K 1
CoreImage 16K 4
CoreUI image data 616K 8
Foundation 4K 1
Kernel Alloc Once 404K 3
MALLOC 200.2M 88
MALLOC guard page 32K 7
MALLOC_LARGE (reserved) 384K 1 reserved VM address space (unallocated)
MALLOC_NANO (reserved) 384.0M 1 reserved VM address space (unallocated)
Memory Tag 242 12K 1
STACK GUARD 12K 3
Stack 9752K 4
Stack Guard 56.0M 1
VM_ALLOCATE 32.4M 146
VM_ALLOCATE (reserved) 32.0M 1 reserved VM address space (unallocated)
__DATA 216K 2
__DATA_CONST 20K 1
__LINKEDIT 224K 1
__TEXT 580K 1
dylib 1692K 25
dylib (reserved) 8K 2 reserved VM address space (unallocated)
mapped file 285.5M 341
shared memory 632K 14
=========== ======= =======
TOTAL 1.0G 676
TOTAL, minus reserved VM space 590.9M 676
System Profile:
Network Service: Wi-Fi, AirPort, en0
Thunderbolt Bus: MacBook Air, Apple Inc., 27.2
Boot Volume File System Type: apfs
Memory Module: BANK 0/DIMM0, 4 GB, DDR3, 1600 MHz, 0x80CE, 0x4B3445364533303445452D45474345000000
Memory Module: BANK 1/DIMM0, 4 GB, DDR3, 1600 MHz, 0x80CE, 0x4B3445364533303445452D45474345000000
USB Device: USB 3.0 Bus
USB Device: Internal Memory Card Reader
USB Device: BRCM20702 Hub
USB Device: Bluetooth USB Host Controller
Serial ATA Device: APPLE SSD SM0256G, 251 GB
Model: MacBookAir7,2, BootROM 191.0.0.0.0, 2 processors, Dual-Core Intel Core i5, 1.8 GHz, 8 GB, SMC 2.27f2
Graphics: kHW_IntelHDGraphics6000Item, Intel HD Graphics 6000, spdisplays_builtin
AirPort: spairport_wireless_card_type_airport_extreme (0x14E4, 0x117), Broadcom BCM43xx 1.0 (7.77.106.3 AirPortDriverBrcmNIC-1435.3)
Bluetooth: Version 7.0.2f4, 3 services, 25 devices, 1 incoming serial ports
Log:
UCSF ChimeraX version: 0.91 (2019-09-10)
© 2016-2019 Regents of the University of California. All rights reserved.
How to cite UCSF ChimeraX
OpenGL version: 4.1 INTEL-14.3.9
OpenGL renderer: Intel(R) HD Graphics 6000
OpenGL vendor: Intel Inc.
Change History (2)
comment:1 by , 6 years ago
| Component: | Unassigned → Core |
|---|---|
| Owner: | set to |
| Platform: | → all |
| Project: | → ChimeraX |
| Status: | new → assigned |
| Summary: | ChimeraX bug report submission → (corrupted stack?) crash |
comment:2 by , 6 years ago
| Resolution: | → can't reproduce |
|---|---|
| Status: | assigned → closed |
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