Opened 6 years ago

Closed 6 years ago

#2757 closed defect (duplicate)

Crash drawing Qt interface

Reported by: scheffer@… Owned by: Tom Goddard
Priority: normal Milestone:
Component: Window Toolkit Version:
Keywords: Cc: Eric Pettersen
Blocked By: Blocking:
Notify when closed: Platform: all
Project: ChimeraX

Description

The following bug report has been submitted:
Platform:        Darwin-19.2.0-x86_64-i386-64bit
ChimeraX Version: 0.91 (2019-06-14)
Description
Last time you used ChimeraX it crashed.
Please describe steps that led to the crash here.
Process:               ChimeraX [19514]
Path:                  /Applications/ChimeraX.app/Contents/MacOS/ChimeraX
Identifier:            edu.ucsf.cgl.ChimeraX
Version:               0.91.0 (0.91.0.0)
Code Type:             X86-64 (Native)
Parent Process:        ??? [1]
Responsible:           ChimeraX [19514]
User ID:               503

Date/Time:             2020-01-17 10:57:36.556 +0100
OS Version:            Mac OS X 10.15.2 (19C57)
Report Version:        12
Bridge OS Version:     3.0 (14Y908)
Anonymous UUID:        4CADCB44-703C-C375-33E7-C9E8589493FE

Sleep/Wake UUID:       26AD97A8-FE92-4805-8720-E7D951D057C6

Time Awake Since Boot: 320000 seconds
Time Since Wake:       2200 seconds

System Integrity Protection: enabled

Crashed Thread:        0  CrBrowserMain  Dispatch queue: com.apple.main-thread

Exception Type:        EXC_BAD_ACCESS (SIGSEGV)
Exception Codes:       KERN_INVALID_ADDRESS at 0x0000000000000000
Exception Note:        EXC_CORPSE_NOTIFY

VM Regions Near 0:
--> 
    __TEXT                 000000010f313000-000000010f314000 [    4K] r-x/rwx SM=COW  /Applications/ChimeraX.app/Contents/MacOS/ChimeraX

Thread 0 Crashed:: CrBrowserMain  Dispatch queue: com.apple.main-thread
0   libsystem_kernel.dylib        	0x00007fff6ea897fa __pthread_kill + 10
1   libsystem_pthread.dylib       	0x00007fff6eb46bc1 pthread_kill + 432
2   libsystem_c.dylib             	0x00007fff6e9a03a2 raise + 26
3   libsystem_platform.dylib      	0x00007fff6eb3b42d _sigtramp + 29
4   ???                           	000000000000000000 0 + 0
5   GLEngine                      	0x00007fff41bf49f0 glDrawArrays_ACC_Exec + 898
6   QtGui                         	0x0000000118856a5b 0x118505000 + 3480155
7   QtGui                         	0x00000001187ed0e5 0x118505000 + 3047653
8   QtGui                         	0x00000001187ec2ba QPlatformBackingStore::composeAndFlush(QWindow*, QRegion const&, QPoint const&, QPlatformTextureList*, bool) + 2314
9   QtWidgets                     	0x0000000117f7c833 0x117f64000 + 100403
10  QtWidgets                     	0x0000000117f7cbae 0x117f64000 + 101294
11  QtWidgets                     	0x0000000117f820b7 0x117f64000 + 123063
12  QtWidgets                     	0x0000000117fb090d QWidget::event(QEvent*) + 1645
13  QtWidgets                     	0x00000001180c19b5 QMainWindow::event(QEvent*) + 277
14  QtWidgets.so                  	0x0000000117a97e70 sipQMainWindow::event(QEvent*) + 192
15  QtWidgets                     	0x0000000117f746fd QApplicationPrivate::notify_helper(QObject*, QEvent*) + 269
16  QtWidgets                     	0x0000000117f75b02 QApplication::notify(QObject*, QEvent*) + 594
17  QtWidgets.so                  	0x0000000117b433ca sipQApplication::notify(QObject*, QEvent*) + 234
18  QtCore                        	0x0000000118c34e44 QCoreApplication::notifyInternal2(QObject*, QEvent*) + 212
19  QtCore                        	0x0000000118c3607e QCoreApplicationPrivate::sendPostedEvents(QObject*, int, QThreadData*) + 878
20  libqcocoa.dylib               	0x00000001229635e9 0x12292f000 + 214505
21  libqcocoa.dylib               	0x0000000122963d50 0x12292f000 + 216400
22  com.apple.CoreFoundation      	0x00007fff372e7b21 __CFRUNLOOP_IS_CALLING_OUT_TO_A_SOURCE0_PERFORM_FUNCTION__ + 17
23  com.apple.CoreFoundation      	0x00007fff372e7ac0 __CFRunLoopDoSource0 + 103
24  com.apple.CoreFoundation      	0x00007fff372e78d4 __CFRunLoopDoSources0 + 209
25  com.apple.CoreFoundation      	0x00007fff372e6740 __CFRunLoopRun + 1272
26  com.apple.CoreFoundation      	0x00007fff372e5bd3 CFRunLoopRunSpecific + 499
27  com.apple.HIToolbox           	0x00007fff35e3c65d RunCurrentEventLoopInMode + 292
28  com.apple.HIToolbox           	0x00007fff35e3c39d ReceiveNextEventCommon + 600
29  com.apple.HIToolbox           	0x00007fff35e3c127 _BlockUntilNextEventMatchingListInModeWithFilter + 64
30  com.apple.AppKit              	0x00007fff344adeb4 _DPSNextEvent + 990
31  com.apple.AppKit              	0x00007fff344ac690 -[NSApplication(NSEvent) _nextEventMatchingEventMask:untilDate:inMode:dequeue:] + 1352
32  com.apple.AppKit              	0x00007fff3449e3ae -[NSApplication run] + 658
33  libqcocoa.dylib               	0x0000000122962ccb 0x12292f000 + 212171
34  QtCore                        	0x0000000118c3050f QEventLoop::exec(QFlags) + 431
35  QtCore                        	0x0000000118c35452 QCoreApplication::exec() + 130
36  QtWidgets.so                  	0x0000000117c327d2 meth_QApplication_exec_(_object*, _object*) + 82
37  org.python.python             	0x000000010f33d3ab _PyMethodDef_RawFastCallKeywords + 251
38  org.python.python             	0x000000010f33c93c _PyCFunction_FastCallKeywords + 44
39  org.python.python             	0x000000010f406209 call_function + 617
40  org.python.python             	0x000000010f3fe8da _PyEval_EvalFrameDefault + 5562
41  org.python.python             	0x000000010f33cdf3 function_code_fastcall + 195
42  org.python.python             	0x000000010f406271 call_function + 721
43  org.python.python             	0x000000010f3fe8da _PyEval_EvalFrameDefault + 5562
44  org.python.python             	0x000000010f406e81 _PyEval_EvalCodeWithName + 2721
45  org.python.python             	0x000000010f33c8f6 _PyFunction_FastCallKeywords + 230
46  org.python.python             	0x000000010f406271 call_function + 721
47  org.python.python             	0x000000010f3fe96b _PyEval_EvalFrameDefault + 5707
48  org.python.python             	0x000000010f406e81 _PyEval_EvalCodeWithName + 2721
49  org.python.python             	0x000000010f3fd280 PyEval_EvalCode + 48
50  org.python.python             	0x000000010f3fa9c3 builtin_exec + 563
51  org.python.python             	0x000000010f33d55e _PyMethodDef_RawFastCallKeywords + 686
52  org.python.python             	0x000000010f33c93c _PyCFunction_FastCallKeywords + 44
53  org.python.python             	0x000000010f406209 call_function + 617
54  org.python.python             	0x000000010f3fe96b _PyEval_EvalFrameDefault + 5707
55  org.python.python             	0x000000010f406e81 _PyEval_EvalCodeWithName + 2721
56  org.python.python             	0x000000010f33c8f6 _PyFunction_FastCallKeywords + 230
57  org.python.python             	0x000000010f406271 call_function + 721
58  org.python.python             	0x000000010f3fe96b _PyEval_EvalFrameDefault + 5707
59  org.python.python             	0x000000010f406e81 _PyEval_EvalCodeWithName + 2721
60  org.python.python             	0x000000010f33c3d2 _PyFunction_FastCallDict + 450
61  org.python.python             	0x000000010f45b4c3 pymain_run_module + 147
62  org.python.python             	0x000000010f45a2d6 pymain_main + 4262
63  org.python.python             	0x000000010f459223 Py_Main + 51
64  edu.ucsf.cgl.ChimeraX         	0x000000010f313dcb main + 587
65  libdyld.dylib                 	0x00007fff6e9427fd start + 1

Thread 1:: com.apple.NSEventThread
0   libsystem_kernel.dylib        	0x00007fff6ea8325a mach_msg_trap + 10
1   libsystem_kernel.dylib        	0x00007fff6ea835d0 mach_msg + 60
2   com.apple.CoreFoundation      	0x00007fff372e7d0b __CFRunLoopServiceMachPort + 322
3   com.apple.CoreFoundation      	0x00007fff372e68e7 __CFRunLoopRun + 1695
4   com.apple.CoreFoundation      	0x00007fff372e5bd3 CFRunLoopRunSpecific + 499
5   com.apple.AppKit              	0x00007fff34650a72 _NSEventThread + 132
6   libsystem_pthread.dylib       	0x00007fff6eb46e65 _pthread_start + 148
7   libsystem_pthread.dylib       	0x00007fff6eb4283b thread_start + 15

Thread 2:: NetworkConfigWatcher
0   libsystem_kernel.dylib        	0x00007fff6ea8325a mach_msg_trap + 10
1   libsystem_kernel.dylib        	0x00007fff6ea835d0 mach_msg + 60
2   QtWebEngineCore               	0x000000011d5fd96d 0x11b456000 + 35289453
3   QtWebEngineCore               	0x000000011d5fd86f 0x11b456000 + 35289199
4   QtWebEngineCore               	0x000000011d5b169d 0x11b456000 + 34977437
5   QtWebEngineCore               	0x000000011d5da6c5 0x11b456000 + 35145413
6   QtWebEngineCore               	0x000000011d62cffc 0x11b456000 + 35483644
7   QtWebEngineCore               	0x000000011d66cd47 0x11b456000 + 35745095
8   libsystem_pthread.dylib       	0x00007fff6eb46e65 _pthread_start + 148
9   libsystem_pthread.dylib       	0x00007fff6eb4283b thread_start + 15

Thread 3:: DnsConfigService
0   libsystem_kernel.dylib        	0x00007fff6ea87bce kevent + 10
1   QtWebEngineCore               	0x000000011d8befd9 0x11b456000 + 38178777
2   QtWebEngineCore               	0x000000011d8bc2ed 0x11b456000 + 38167277
3   QtWebEngineCore               	0x000000011d67330c 0x11b456000 + 35771148
4   QtWebEngineCore               	0x000000011d5da6c5 0x11b456000 + 35145413
5   QtWebEngineCore               	0x000000011d62cffc 0x11b456000 + 35483644
6   QtWebEngineCore               	0x000000011d66cd47 0x11b456000 + 35745095
7   libsystem_pthread.dylib       	0x00007fff6eb46e65 _pthread_start + 148
8   libsystem_pthread.dylib       	0x00007fff6eb4283b thread_start + 15

Thread 4:: TaskSchedulerServiceThread
0   libsystem_kernel.dylib        	0x00007fff6ea87bce kevent + 10
1   QtWebEngineCore               	0x000000011d8befd9 0x11b456000 + 38178777
2   QtWebEngineCore               	0x000000011d8bc2ed 0x11b456000 + 38167277
3   QtWebEngineCore               	0x000000011d6732f4 0x11b456000 + 35771124
4   QtWebEngineCore               	0x000000011d5da6c5 0x11b456000 + 35145413
5   QtWebEngineCore               	0x000000011d61c0b4 0x11b456000 + 35414196
6   QtWebEngineCore               	0x000000011d62cffc 0x11b456000 + 35483644
7   QtWebEngineCore               	0x000000011d66cd47 0x11b456000 + 35745095
8   libsystem_pthread.dylib       	0x00007fff6eb46e65 _pthread_start + 148
9   libsystem_pthread.dylib       	0x00007fff6eb4283b thread_start + 15

Thread 5:: TaskSchedulerForegroundWorker
0   libsystem_kernel.dylib        	0x00007fff6ea8325a mach_msg_trap + 10
1   libsystem_kernel.dylib        	0x00007fff6ea835d0 mach_msg + 60
2   QtWebEngineCore               	0x000000011d5fd96d 0x11b456000 + 35289453
3   QtWebEngineCore               	0x000000011d5fda61 0x11b456000 + 35289697
4   QtWebEngineCore               	0x000000011d615368 0x11b456000 + 35386216
5   QtWebEngineCore               	0x000000011d615c9b 0x11b456000 + 35388571
6   QtWebEngineCore               	0x000000011d615904 0x11b456000 + 35387652
7   QtWebEngineCore               	0x000000011d66cd47 0x11b456000 + 35745095
8   libsystem_pthread.dylib       	0x00007fff6eb46e65 _pthread_start + 148
9   libsystem_pthread.dylib       	0x00007fff6eb4283b thread_start + 15

Thread 6:: TaskSchedulerForegroundBlockingWorker
0   libsystem_kernel.dylib        	0x00007fff6ea8325a mach_msg_trap + 10
1   libsystem_kernel.dylib        	0x00007fff6ea835d0 mach_msg + 60
2   QtWebEngineCore               	0x000000011d5fd96d 0x11b456000 + 35289453
3   QtWebEngineCore               	0x000000011d5fda61 0x11b456000 + 35289697
4   QtWebEngineCore               	0x000000011d615368 0x11b456000 + 35386216
5   QtWebEngineCore               	0x000000011d615c9b 0x11b456000 + 35388571
6   QtWebEngineCore               	0x000000011d615904 0x11b456000 + 35387652
7   QtWebEngineCore               	0x000000011d66cd47 0x11b456000 + 35745095
8   libsystem_pthread.dylib       	0x00007fff6eb46e65 _pthread_start + 148
9   libsystem_pthread.dylib       	0x00007fff6eb4283b thread_start + 15

Thread 7:: TaskSchedulerBackgroundWorker
0   libsystem_kernel.dylib        	0x00007fff6ea8325a mach_msg_trap + 10
1   libsystem_kernel.dylib        	0x00007fff6ea835d0 mach_msg + 60
2   QtWebEngineCore               	0x000000011d5fd96d 0x11b456000 + 35289453
3   QtWebEngineCore               	0x000000011d5fda61 0x11b456000 + 35289697
4   QtWebEngineCore               	0x000000011d615368 0x11b456000 + 35386216
5   QtWebEngineCore               	0x000000011d615c9b 0x11b456000 + 35388571
6   QtWebEngineCore               	0x000000011d615874 0x11b456000 + 35387508
7   QtWebEngineCore               	0x000000011d66cd47 0x11b456000 + 35745095
8   libsystem_pthread.dylib       	0x00007fff6eb46e65 _pthread_start + 148
9   libsystem_pthread.dylib       	0x00007fff6eb4283b thread_start + 15

Thread 8:: TaskSchedulerBackgroundBlockingWorker
0   libsystem_kernel.dylib        	0x00007fff6ea8325a mach_msg_trap + 10
1   libsystem_kernel.dylib        	0x00007fff6ea835d0 mach_msg + 60
2   QtWebEngineCore               	0x000000011d5fd96d 0x11b456000 + 35289453
3   QtWebEngineCore               	0x000000011d5fda61 0x11b456000 + 35289697
4   QtWebEngineCore               	0x000000011d615368 0x11b456000 + 35386216
5   QtWebEngineCore               	0x000000011d615c9b 0x11b456000 + 35388571
6   QtWebEngineCore               	0x000000011d615874 0x11b456000 + 35387508
7   QtWebEngineCore               	0x000000011d66cd47 0x11b456000 + 35745095
8   libsystem_pthread.dylib       	0x00007fff6eb46e65 _pthread_start + 148
9   libsystem_pthread.dylib       	0x00007fff6eb4283b thread_start + 15

Thread 9:: Chrome_IOThread
0   libsystem_kernel.dylib        	0x00007fff6ea87bce kevent + 10
1   QtWebEngineCore               	0x000000011d8befd9 0x11b456000 + 38178777
2   QtWebEngineCore               	0x000000011d8bc2ed 0x11b456000 + 38167277
3   QtWebEngineCore               	0x000000011d6732f4 0x11b456000 + 35771124
4   QtWebEngineCore               	0x000000011d5da6c5 0x11b456000 + 35145413
5   QtWebEngineCore               	0x000000011cf40a74 0x11b456000 + 28224116
6   QtWebEngineCore               	0x000000011d62cffc 0x11b456000 + 35483644
7   QtWebEngineCore               	0x000000011d66cd47 0x11b456000 + 35745095
8   libsystem_pthread.dylib       	0x00007fff6eb46e65 _pthread_start + 148
9   libsystem_pthread.dylib       	0x00007fff6eb4283b thread_start + 15

Thread 10:: TaskSchedulerSingleThreadSharedBackgroundBlocking0
0   libsystem_kernel.dylib        	0x00007fff6ea8325a mach_msg_trap + 10
1   libsystem_kernel.dylib        	0x00007fff6ea835d0 mach_msg + 60
2   QtWebEngineCore               	0x000000011d5fd96d 0x11b456000 + 35289453
3   QtWebEngineCore               	0x000000011d5fd86f 0x11b456000 + 35289199
4   QtWebEngineCore               	0x000000011d61535a 0x11b456000 + 35386202
5   QtWebEngineCore               	0x000000011d6159ff 0x11b456000 + 35387903
6   QtWebEngineCore               	0x000000011d6158a4 0x11b456000 + 35387556
7   QtWebEngineCore               	0x000000011d66cd47 0x11b456000 + 35745095
8   libsystem_pthread.dylib       	0x00007fff6eb46e65 _pthread_start + 148
9   libsystem_pthread.dylib       	0x00007fff6eb4283b thread_start + 15

Thread 11:: CompositorTileWorker1/70659
0   libsystem_kernel.dylib        	0x00007fff6ea85ce6 __psynch_cvwait + 10
1   libsystem_pthread.dylib       	0x00007fff6eb47185 _pthread_cond_wait + 701
2   QtWebEngineCore               	0x000000011d66b5d8 0x11b456000 + 35739096
3   QtWebEngineCore               	0x000000011e5f3a68 0x11b456000 + 52025960
4   QtWebEngineCore               	0x000000011d62bcd4 0x11b456000 + 35478740
5   QtWebEngineCore               	0x000000011d66cd47 0x11b456000 + 35745095
6   libsystem_pthread.dylib       	0x00007fff6eb46e65 _pthread_start + 148
7   libsystem_pthread.dylib       	0x00007fff6eb4283b thread_start + 15

Thread 12:: AudioThread
0   libsystem_kernel.dylib        	0x00007fff6ea8325a mach_msg_trap + 10
1   libsystem_kernel.dylib        	0x00007fff6ea835d0 mach_msg + 60
2   QtWebEngineCore               	0x000000011d5fd96d 0x11b456000 + 35289453
3   QtWebEngineCore               	0x000000011d5fd86f 0x11b456000 + 35289199
4   QtWebEngineCore               	0x000000011d5b169d 0x11b456000 + 34977437
5   QtWebEngineCore               	0x000000011d5da6c5 0x11b456000 + 35145413
6   QtWebEngineCore               	0x000000011d62cffc 0x11b456000 + 35483644
7   QtWebEngineCore               	0x000000011d66cd47 0x11b456000 + 35745095
8   libsystem_pthread.dylib       	0x00007fff6eb46e65 _pthread_start + 148
9   libsystem_pthread.dylib       	0x00007fff6eb4283b thread_start + 15

Thread 13:: NetworkConfigWatcher
0   libsystem_kernel.dylib        	0x00007fff6ea8325a mach_msg_trap + 10
1   libsystem_kernel.dylib        	0x00007fff6ea835d0 mach_msg + 60
2   QtWebEngineCore               	0x000000011d5fd96d 0x11b456000 + 35289453
3   QtWebEngineCore               	0x000000011d5fd86f 0x11b456000 + 35289199
4   QtWebEngineCore               	0x000000011d5b169d 0x11b456000 + 34977437
5   QtWebEngineCore               	0x000000011d5da6c5 0x11b456000 + 35145413
6   QtWebEngineCore               	0x000000011d62cffc 0x11b456000 + 35483644
7   QtWebEngineCore               	0x000000011d66cd47 0x11b456000 + 35745095
8   libsystem_pthread.dylib       	0x00007fff6eb46e65 _pthread_start + 148
9   libsystem_pthread.dylib       	0x00007fff6eb4283b thread_start + 15

Thread 14:: Chrome_InProcGpuThread
0   libsystem_kernel.dylib        	0x00007fff6ea8325a mach_msg_trap + 10
1   libsystem_kernel.dylib        	0x00007fff6ea835d0 mach_msg + 60
2   QtWebEngineCore               	0x000000011d5fd96d 0x11b456000 + 35289453
3   QtWebEngineCore               	0x000000011d5b1692 0x11b456000 + 34977426
4   QtWebEngineCore               	0x000000011d5da6c5 0x11b456000 + 35145413
5   QtWebEngineCore               	0x000000011d62cffc 0x11b456000 + 35483644
6   QtWebEngineCore               	0x000000011d66cd47 0x11b456000 + 35745095
7   libsystem_pthread.dylib       	0x00007fff6eb46e65 _pthread_start + 148
8   libsystem_pthread.dylib       	0x00007fff6eb4283b thread_start + 15

Thread 15:: Chrome_ChildIOThread
0   libsystem_kernel.dylib        	0x00007fff6ea87bce kevent + 10
1   QtWebEngineCore               	0x000000011d8befd9 0x11b456000 + 38178777
2   QtWebEngineCore               	0x000000011d8bc2ed 0x11b456000 + 38167277
3   QtWebEngineCore               	0x000000011d67330c 0x11b456000 + 35771148
4   QtWebEngineCore               	0x000000011d5da6c5 0x11b456000 + 35145413
5   QtWebEngineCore               	0x000000011d62cffc 0x11b456000 + 35483644
6   QtWebEngineCore               	0x000000011d66cd47 0x11b456000 + 35745095
7   libsystem_pthread.dylib       	0x00007fff6eb46e65 _pthread_start + 148
8   libsystem_pthread.dylib       	0x00007fff6eb4283b thread_start + 15

Thread 16:: TaskSchedulerSingleThreadForegroundBlocking1
0   libsystem_kernel.dylib        	0x00007fff6ea8325a mach_msg_trap + 10
1   libsystem_kernel.dylib        	0x00007fff6ea835d0 mach_msg + 60
2   QtWebEngineCore               	0x000000011d5fd96d 0x11b456000 + 35289453
3   QtWebEngineCore               	0x000000011d5fd86f 0x11b456000 + 35289199
4   QtWebEngineCore               	0x000000011d61535a 0x11b456000 + 35386202
5   QtWebEngineCore               	0x000000011d615c9b 0x11b456000 + 35388571
6   QtWebEngineCore               	0x000000011d615964 0x11b456000 + 35387748
7   QtWebEngineCore               	0x000000011d66cd47 0x11b456000 + 35745095
8   libsystem_pthread.dylib       	0x00007fff6eb46e65 _pthread_start + 148
9   libsystem_pthread.dylib       	0x00007fff6eb4283b thread_start + 15

Thread 17:: QFileInfoGatherer
0   libsystem_kernel.dylib        	0x00007fff6ea85ce6 __psynch_cvwait + 10
1   libsystem_pthread.dylib       	0x00007fff6eb47185 _pthread_cond_wait + 701
2   QtCore                        	0x0000000118a7686b 0x118a4c000 + 174187
3   QtCore                        	0x0000000118a767cc QWaitCondition::wait(QMutex*, QDeadlineTimer) + 108
4   QtWidgets                     	0x000000011819f772 0x117f64000 + 2340722
5   QtCore                        	0x0000000118a6e073 0x118a4c000 + 139379
6   libsystem_pthread.dylib       	0x00007fff6eb46e65 _pthread_start + 148
7   libsystem_pthread.dylib       	0x00007fff6eb4283b thread_start + 15

Thread 18:: NetworkConfigWatcher
0   libsystem_kernel.dylib        	0x00007fff6ea8325a mach_msg_trap + 10
1   libsystem_kernel.dylib        	0x00007fff6ea835d0 mach_msg + 60
2   QtWebEngineCore               	0x000000011d5fd96d 0x11b456000 + 35289453
3   QtWebEngineCore               	0x000000011d5fd86f 0x11b456000 + 35289199
4   QtWebEngineCore               	0x000000011d5b169d 0x11b456000 + 34977437
5   QtWebEngineCore               	0x000000011d5da6c5 0x11b456000 + 35145413
6   QtWebEngineCore               	0x000000011d62cffc 0x11b456000 + 35483644
7   QtWebEngineCore               	0x000000011d66cd47 0x11b456000 + 35745095
8   libsystem_pthread.dylib       	0x00007fff6eb46e65 _pthread_start + 148
9   libsystem_pthread.dylib       	0x00007fff6eb4283b thread_start + 15

Thread 19:
0   libsystem_kernel.dylib        	0x00007fff6ea85ce6 __psynch_cvwait + 10
1   libsystem_pthread.dylib       	0x00007fff6eb47185 _pthread_cond_wait + 701
2   libopenblasp-r0.3.7.dev.dylib 	0x0000000113539c0b blas_thread_server + 619
3   libsystem_pthread.dylib       	0x00007fff6eb46e65 _pthread_start + 148
4   libsystem_pthread.dylib       	0x00007fff6eb4283b thread_start + 15

Thread 20:: QFileInfoGatherer
0   libsystem_kernel.dylib        	0x00007fff6ea85ce6 __psynch_cvwait + 10
1   libsystem_pthread.dylib       	0x00007fff6eb47185 _pthread_cond_wait + 701
2   QtCore                        	0x0000000118a7686b 0x118a4c000 + 174187
3   QtCore                        	0x0000000118a767cc QWaitCondition::wait(QMutex*, QDeadlineTimer) + 108
4   QtWidgets                     	0x000000011819f772 0x117f64000 + 2340722
5   QtCore                        	0x0000000118a6e073 0x118a4c000 + 139379
6   libsystem_pthread.dylib       	0x00007fff6eb46e65 _pthread_start + 148
7   libsystem_pthread.dylib       	0x00007fff6eb4283b thread_start + 15

Thread 21:
0   libsystem_pthread.dylib       	0x00007fff6eb42818 start_wqthread + 0

Thread 22:
0   libsystem_pthread.dylib       	0x00007fff6eb42818 start_wqthread + 0

Thread 23:
0   libsystem_pthread.dylib       	0x00007fff6eb42818 start_wqthread + 0

Thread 24:
0   libsystem_kernel.dylib        	0x00007fff6ea85ce6 __psynch_cvwait + 10
1   libsystem_pthread.dylib       	0x00007fff6eb47185 _pthread_cond_wait + 701
2   org.python.python             	0x000000010f446b06 PyThread_acquire_lock_timed + 390
3   org.python.python             	0x000000010f48e1e6 acquire_timed + 134
4   org.python.python             	0x000000010f48df6c lock_PyThread_acquire_lock + 44
5   org.python.python             	0x000000010f33d59a _PyMethodDef_RawFastCallKeywords + 746
6   org.python.python             	0x000000010f343052 _PyMethodDescr_FastCallKeywords + 82
7   org.python.python             	0x000000010f40629b call_function + 763
8   org.python.python             	0x000000010f3fe8c0 _PyEval_EvalFrameDefault + 5536
9   org.python.python             	0x000000010f406e81 _PyEval_EvalCodeWithName + 2721
10  org.python.python             	0x000000010f33c8f6 _PyFunction_FastCallKeywords + 230
11  org.python.python             	0x000000010f406271 call_function + 721
12  org.python.python             	0x000000010f3fe8c0 _PyEval_EvalFrameDefault + 5536
13  org.python.python             	0x000000010f406e81 _PyEval_EvalCodeWithName + 2721
14  org.python.python             	0x000000010f33c8f6 _PyFunction_FastCallKeywords + 230
15  org.python.python             	0x000000010f406271 call_function + 721
16  org.python.python             	0x000000010f3fe8c0 _PyEval_EvalFrameDefault + 5536
17  org.python.python             	0x000000010f33cdf3 function_code_fastcall + 195
18  org.python.python             	0x000000010f406271 call_function + 721
19  org.python.python             	0x000000010f3fe8c0 _PyEval_EvalFrameDefault + 5536
20  org.python.python             	0x000000010f33cdf3 function_code_fastcall + 195
21  org.python.python             	0x000000010f406271 call_function + 721
22  org.python.python             	0x000000010f3fe8c0 _PyEval_EvalFrameDefault + 5536
23  org.python.python             	0x000000010f33cdf3 function_code_fastcall + 195
24  org.python.python             	0x000000010f33d886 _PyObject_Call_Prepend + 150
25  org.python.python             	0x000000010f33ca58 PyObject_Call + 136
26  org.python.python             	0x000000010f48eac7 t_bootstrap + 71
27  org.python.python             	0x000000010f446749 pythread_wrapper + 25
28  libsystem_pthread.dylib       	0x00007fff6eb46e65 _pthread_start + 148
29  libsystem_pthread.dylib       	0x00007fff6eb4283b thread_start + 15

Thread 25:: TaskSchedulerForegroundWorker
0   libsystem_kernel.dylib        	0x00007fff6ea8325a mach_msg_trap + 10
1   libsystem_kernel.dylib        	0x00007fff6ea835d0 mach_msg + 60
2   QtWebEngineCore               	0x000000011d5fd96d 0x11b456000 + 35289453
3   QtWebEngineCore               	0x000000011d5fda61 0x11b456000 + 35289697
4   QtWebEngineCore               	0x000000011d615368 0x11b456000 + 35386216
5   QtWebEngineCore               	0x000000011d6159ff 0x11b456000 + 35387903
6   QtWebEngineCore               	0x000000011d615904 0x11b456000 + 35387652
7   QtWebEngineCore               	0x000000011d66cd47 0x11b456000 + 35745095
8   libsystem_pthread.dylib       	0x00007fff6eb46e65 _pthread_start + 148
9   libsystem_pthread.dylib       	0x00007fff6eb4283b thread_start + 15

Thread 0 crashed with X86 Thread State (64-bit):
  rax: 0x0000000000000000  rbx: 0x00000001131c8dc0  rcx: 0x000000010f785a58  rdx: 0x0000000000000000
  rdi: 0x0000000000000307  rsi: 0x000000000000000b  rbp: 0x000000010f785a80  rsp: 0x000000010f785a58
   r8: 0x000000010f785f48   r9: 0xec6c97b46863d05f  r10: 0x00000001131c8dc0  r11: 0x0000000000000246
  r12: 0x0000000000000307  r13: 0x000000012bdc3000  r14: 0x000000000000000b  r15: 0x0000000000000016
  rip: 0x00007fff6ea897fa  rfl: 0x0000000000000246  cr2: 0x000000010f565284
  
Logical CPU:     0
Error Code:      0x02000148
Trap Number:     133


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    0x7fff6c8d9000 -     0x7fff6c980fff  libmecab.dylib (883.1.1)  /usr/lib/libmecab.dylib
    0x7fff6c981000 -     0x7fff6cbe3fe1  libmecabra.dylib (883.1.1)  /usr/lib/libmecabra.dylib
    0x7fff6cf4f000 -     0x7fff6cf7eff7  libncurses.5.4.dylib (57)  /usr/lib/libncurses.5.4.dylib
    0x7fff6d0ad000 -     0x7fff6d523ff7  libnetwork.dylib (1880.60.5)  /usr/lib/libnetwork.dylib
    0x7fff6d524000 -     0x7fff6d53afff  libnetworkextension.dylib (1095.60.2)  /usr/lib/libnetworkextension.dylib
    0x7fff6d5c2000 -     0x7fff6d5f3fc6  libobjc.A.dylib (781.2)  /usr/lib/libobjc.A.dylib
    0x7fff6d5f4000 -     0x7fff6d5f5ff7  libodfde.dylib (26)  /usr/lib/libodfde.dylib
    0x7fff6d606000 -     0x7fff6d60afff  libpam.2.dylib (25)  /usr/lib/libpam.2.dylib
    0x7fff6d60d000 -     0x7fff6d643ff7  libpcap.A.dylib (89.60.2)  /usr/lib/libpcap.A.dylib
    0x7fff6d681000 -     0x7fff6d68fff9  libperfcheck.dylib (37)  /usr/lib/libperfcheck.dylib
    0x7fff6d6c5000 -     0x7fff6d6ddff7  libresolv.9.dylib (67.40.1)  /usr/lib/libresolv.9.dylib
    0x7fff6d6df000 -     0x7fff6d723fff  libsandbox.1.dylib (1217.61.1)  /usr/lib/libsandbox.1.dylib
    0x7fff6d724000 -     0x7fff6d736fff  libsasl2.2.dylib (213)  /usr/lib/libsasl2.2.dylib
    0x7fff6d737000 -     0x7fff6d738ff7  libspindump.dylib (281.2)  /usr/lib/libspindump.dylib
    0x7fff6d739000 -     0x7fff6d926ff7  libsqlite3.dylib (308.4)  /usr/lib/libsqlite3.dylib
    0x7fff6da1a000 -     0x7fff6da47ffb  libssl.46.dylib (47.11.1)  /usr/lib/libssl.46.dylib
    0x7fff6db1c000 -     0x7fff6db77ff8  libusrtcp.dylib (1880.60.5)  /usr/lib/libusrtcp.dylib
    0x7fff6db78000 -     0x7fff6db7bffb  libutil.dylib (57)  /usr/lib/libutil.dylib
    0x7fff6db7c000 -     0x7fff6db89fff  libxar.1.dylib (420)  /usr/lib/libxar.1.dylib
    0x7fff6db8f000 -     0x7fff6dc71ff7  libxml2.2.dylib (32.13)  /usr/lib/libxml2.2.dylib
    0x7fff6dc75000 -     0x7fff6dc9dfff  libxslt.1.dylib (16.7)  /usr/lib/libxslt.1.dylib
    0x7fff6dc9e000 -     0x7fff6dcb0ffb  libz.1.dylib (76)  /usr/lib/libz.1.dylib
    0x7fff6e714000 -     0x7fff6e719ff3  libcache.dylib (83)  /usr/lib/system/libcache.dylib
    0x7fff6e71a000 -     0x7fff6e725fff  libcommonCrypto.dylib (60165)  /usr/lib/system/libcommonCrypto.dylib
    0x7fff6e726000 -     0x7fff6e72dfff  libcompiler_rt.dylib (101.2)  /usr/lib/system/libcompiler_rt.dylib
    0x7fff6e72e000 -     0x7fff6e737fff  libcopyfile.dylib (166.40.1)  /usr/lib/system/libcopyfile.dylib
    0x7fff6e738000 -     0x7fff6e7cffe7  libcorecrypto.dylib (866.60.3)  /usr/lib/system/libcorecrypto.dylib
    0x7fff6e8e6000 -     0x7fff6e927ff0  libdispatch.dylib (1173.60.1)  /usr/lib/system/libdispatch.dylib
    0x7fff6e928000 -     0x7fff6e95dff7  libdyld.dylib (733.8)  /usr/lib/system/libdyld.dylib
    0x7fff6e95e000 -     0x7fff6e95effb  libkeymgr.dylib (30)  /usr/lib/system/libkeymgr.dylib
    0x7fff6e95f000 -     0x7fff6e96bff7  libkxld.dylib (6153.61.1)  /usr/lib/system/libkxld.dylib
    0x7fff6e96c000 -     0x7fff6e96cff7  liblaunch.dylib (1738.61.1)  /usr/lib/system/liblaunch.dylib
    0x7fff6e96d000 -     0x7fff6e972ff7  libmacho.dylib (949.0.1)  /usr/lib/system/libmacho.dylib
    0x7fff6e973000 -     0x7fff6e975ff7  libquarantine.dylib (110.40.3)  /usr/lib/system/libquarantine.dylib
    0x7fff6e976000 -     0x7fff6e977ff7  libremovefile.dylib (48)  /usr/lib/system/libremovefile.dylib
    0x7fff6e978000 -     0x7fff6e98ffff  libsystem_asl.dylib (377.60.2)  /usr/lib/system/libsystem_asl.dylib
    0x7fff6e990000 -     0x7fff6e990fff  libsystem_blocks.dylib (74)  /usr/lib/system/libsystem_blocks.dylib
    0x7fff6e991000 -     0x7fff6ea18ff7  libsystem_c.dylib (1353.60.8)  /usr/lib/system/libsystem_c.dylib
    0x7fff6ea19000 -     0x7fff6ea1cffb  libsystem_configuration.dylib (1061.40.2)  /usr/lib/system/libsystem_configuration.dylib
    0x7fff6ea1d000 -     0x7fff6ea20ff7  libsystem_coreservices.dylib (114)  /usr/lib/system/libsystem_coreservices.dylib
    0x7fff6ea21000 -     0x7fff6ea29fff  libsystem_darwin.dylib (1353.60.8)  /usr/lib/system/libsystem_darwin.dylib
    0x7fff6ea2a000 -     0x7fff6ea31ffb  libsystem_dnssd.dylib (1096.60.2)  /usr/lib/system/libsystem_dnssd.dylib
    0x7fff6ea32000 -     0x7fff6ea33ffb  libsystem_featureflags.dylib (17)  /usr/lib/system/libsystem_featureflags.dylib
    0x7fff6ea34000 -     0x7fff6ea81fff  libsystem_info.dylib (538)  /usr/lib/system/libsystem_info.dylib
    0x7fff6ea82000 -     0x7fff6eaaeff7  libsystem_kernel.dylib (6153.61.1)  /usr/lib/system/libsystem_kernel.dylib
    0x7fff6eaaf000 -     0x7fff6eaf6fcf  libsystem_m.dylib (3178)  /usr/lib/system/libsystem_m.dylib
    0x7fff6eaf7000 -     0x7fff6eb1efff  libsystem_malloc.dylib (283.60.1)  /usr/lib/system/libsystem_malloc.dylib
    0x7fff6eb1f000 -     0x7fff6eb2cffb  libsystem_networkextension.dylib (1095.60.2)  /usr/lib/system/libsystem_networkextension.dylib
    0x7fff6eb2d000 -     0x7fff6eb36ff3  libsystem_notify.dylib (241)  /usr/lib/system/libsystem_notify.dylib
    0x7fff6eb37000 -     0x7fff6eb40fef  libsystem_platform.dylib (220)  /usr/lib/system/libsystem_platform.dylib
    0x7fff6eb41000 -     0x7fff6eb4bfff  libsystem_pthread.dylib (416.60.2)  /usr/lib/system/libsystem_pthread.dylib
    0x7fff6eb4c000 -     0x7fff6eb50fff  libsystem_sandbox.dylib (1217.61.1)  /usr/lib/system/libsystem_sandbox.dylib
    0x7fff6eb51000 -     0x7fff6eb53fff  libsystem_secinit.dylib (62.60.1)  /usr/lib/system/libsystem_secinit.dylib
    0x7fff6eb54000 -     0x7fff6eb5bffb  libsystem_symptoms.dylib (1238.60.1)  /usr/lib/system/libsystem_symptoms.dylib
    0x7fff6eb5c000 -     0x7fff6eb72ff2  libsystem_trace.dylib (1147.60.3)  /usr/lib/system/libsystem_trace.dylib
    0x7fff6eb74000 -     0x7fff6eb79ffb  libunwind.dylib (35.4)  /usr/lib/system/libunwind.dylib
    0x7fff6eb7a000 -     0x7fff6ebaeffe  libxpc.dylib (1738.61.1)  /usr/lib/system/libxpc.dylib

External Modification Summary:
  Calls made by other processes targeting this process:
    task_for_pid: 3
    thread_create: 0
    thread_set_state: 0
  Calls made by this process:
    task_for_pid: 0
    thread_create: 0
    thread_set_state: 0
  Calls made by all processes on this machine:
    task_for_pid: 251759
    thread_create: 0
    thread_set_state: 0

VM Region Summary:
ReadOnly portion of Libraries: Total=891.2M resident=0K(0%) swapped_out_or_unallocated=891.2M(100%)
Writable regions: Total=1.3G written=0K(0%) resident=0K(0%) swapped_out=0K(0%) unallocated=1.3G(100%)
 
                                VIRTUAL   REGION 
REGION TYPE                        SIZE    COUNT (non-coalesced) 
===========                     =======  ======= 
Accelerate framework               384K        3 
Activity Tracing                   256K        1 
CG backing stores                 25.8M        8 
CG image                          1396K       30 
CoreAnimation                     1800K       64 
CoreGraphics                         8K        1 
CoreImage                           24K        2 
CoreUI image data                 3716K       32 
Foundation                           4K        1 
Kernel Alloc Once                    8K        1 
MALLOC                           711.4M      738 
MALLOC guard page                   32K        7 
MALLOC_LARGE (reserved)            384K        1         reserved VM address space (unallocated)
MALLOC_NANO (reserved)           256.0M        1         reserved VM address space (unallocated)
Memory Tag 242                      12K        1 
OpenGL GLSL                        512K        6 
PROTECTED_MEMORY                     4K        1 
STACK GUARD                        100K       25 
Stack                            152.7M       26 
Stack Guard                       56.0M        1 
VM_ALLOCATE                      221.6M      400 
__DATA                            50.6M      530 
__DATA_CONST                        44K        4 
__FONT_DATA                          4K        1 
__GLSLBUILTINS                    5176K        1 
__LINKEDIT                       371.9M      125 
__OBJC_RO                         32.0M        1 
__OBJC_RW                         1780K        2 
__TEXT                           519.3M      498 
__UNICODE                          564K        1 
mapped file                      101.1M       99 
shared memory                      664K       21 
===========                     =======  ======= 
TOTAL                              2.5G     2633 
TOTAL, minus reserved VM space     2.2G     2633 



Log:
UCSF ChimeraX version: 0.91 (2019-06-14)  
© 2016-2019 Regents of the University of California. All rights reserved.  
How to cite UCSF ChimeraX  

> open
/Users/scheffer/Documents/WORK/Mycoplasma/David_Manuscript/chimera_network_files/HeteroDimerDocking_show_interferingLoop2.cxs

opened ChimeraX session  




OpenGL version: 4.1 INTEL-14.3.9
OpenGL renderer: Intel(R) Iris(TM) Plus Graphics 650
OpenGL vendor: Intel Inc.

Change History (2)

comment:1 by Eric Pettersen, 6 years ago

Cc: Eric Pettersen added
Component: UnassignedWindow Toolkit
Owner: set to Tom Goddard
Platform: all
Project: ChimeraX
Status: newassigned
Summary: ChimeraX bug report submissionCrash drawing Qt interface

comment:2 by Eric Pettersen, 6 years ago

Resolution: duplicate
Status: assignedclosed

Duplicate of #2755

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