#2658 closed defect (can't reproduce)
Ribbon 'guides' is None after session restore
Reported by: | Owned by: | Tom Goddard | |
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Priority: | normal | Milestone: | |
Component: | Sessions | Version: | |
Keywords: | Cc: | ||
Blocked By: | Blocking: | ||
Notify when closed: | Platform: | all | |
Project: | ChimeraX |
Description
The following bug report has been submitted: Platform: Windows-10-10.0.18362 ChimeraX Version: 0.91 (2019-12-03) Description cartoon style modeHelix wrap command make all the atoms represented in cartoon disapear. Log: UCSF ChimeraX version: 0.91 (2019-12-03) © 2016-2019 Regents of the University of California. All rights reserved. How to cite UCSF ChimeraX > open "C:/Users/Loic/Desktop/Grimes_Lab/Manuscripts/ANP32 paper/Figure > 2/Fig2d.cxs" opened ChimeraX session > cartoon style modeHelix wrap Traceback (most recent call last): File "C:\Program Files\ChimeraX_2\bin\lib\site- packages\chimerax\core\triggerset.py", line 130, in invoke return self._func(self._name, data) File "C:\Program Files\ChimeraX_2\bin\lib\site- packages\chimerax\atomic\structure.py", line 2661, in _update_graphics_if_needed s[i]._update_graphics_if_needed() File "C:\Program Files\ChimeraX_2\bin\lib\site- packages\chimerax\atomic\structure.py", line 304, in _update_graphics_if_needed self._create_ribbon_graphics() File "C:\Program Files\ChimeraX_2\bin\lib\site- packages\chimerax\atomic\structure.py", line 755, in _create_ribbon_graphics helix_ranges, sheet_ranges) File "C:\Program Files\ChimeraX_2\bin\lib\site- packages\chimerax\atomic\structure.py", line 1073, in _smooth_ribbon ribbon_adjusts, start, end, p) File "C:\Program Files\ChimeraX_2\bin\lib\site- packages\chimerax\atomic\structure.py", line 1411, in _wrap_helix guides[start:end] = coords[start:end] + directions TypeError: 'NoneType' object does not support item assignment Error processing trigger "graphics update": TypeError: 'NoneType' object does not support item assignment File "C:\Program Files\ChimeraX_2\bin\lib\site- packages\chimerax\atomic\structure.py", line 1411, in _wrap_helix guides[start:end] = coords[start:end] + directions See log for complete Python traceback. > show atoms > select #1 66274 atoms, 66935 bonds, 16 pseudobonds, 3 models selected > show sel atoms OpenGL version: 3.3.0 NVIDIA 436.30 OpenGL renderer: GeForce 940MX/PCIe/SSE2 OpenGL vendor: NVIDIA Corporation
Change History (4)
comment:1 by , 6 years ago
Component: | Unassigned → Sessions |
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Owner: | set to |
Platform: | → all |
Project: | → ChimeraX |
Status: | new → assigned |
Summary: | ChimeraX bug report submission → Ribbon 'guides' is None after session restore |
comment:2 by , 5 years ago
Owner: | changed from | to
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could not reproduce with tube-helix session
(1) saved in 0.91, restored in 0.91
(2) saved in 1.2 daily build, restored in 1.2 daily build
comment:3 by , 5 years ago
Resolution: | → can't reproduce |
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Status: | assigned → closed |
comment:4 by , 5 years ago
it might be from an older session file, but I couldn't reproduce with session saved in 0.91
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Reported by Loic Carrique