Opened 6 years ago
Last modified 5 years ago
#2487 accepted defect
Blocking Opal jobs need longer timeout
| Reported by: | Elaine Meng | Owned by: | Eric Pettersen |
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| Priority: | major | Milestone: | |
| Component: | Core | Version: | |
| Keywords: | Cc: | Eric Pettersen | |
| Blocked By: | Blocking: | ||
| Notify when closed: | Platform: | all | |
| Project: | ChimeraX |
Description
Blocking Modeller jobs fail because they take longer than 90 seconds to complete, and therefore time out. Here is the commands to reproduce (which need to be in a script, so that blocking will occur):
open 3bp5
open uniprot:pdcd1_human
sequence associate /A pdcd1_human
open uniprot:q2lc89_human
sequence associate /B q2lc89_human:1
modeller comparative pdcd1_human:1,q2lc89_human:1 multichain true numModels 3
I have to say that the suds module is quite the enigmatic beast to investigate. For instance, there is no launchJobBlocking defined in the module -- it is dynamically defined. I flailed around trying to get the timeout changed with no success -- so reassigning this to you (was originally part of ticket #2001).
Change History (2)
comment:1 by , 5 years ago
| Owner: | changed from to |
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comment:2 by , 5 years ago
| Status: | assigned → accepted |
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