![[ChimeraX Issue Tracking System]](/trac/ChimeraX/chrome/site/ChimeraX-icon.svg){kind=icon}
Opened 6 years ago
Closed 6 years ago
#2485 closed defect (can't reproduce)
Crash in free_keys_object/subtype_dealloc
| Reported by: | Owned by: | pett | |
|---|---|---|---|
| Priority: | normal | Milestone: | |
| Component: | Core | Version: | |
| Keywords: | Cc: | Tom Goddard | |
| Blocked By: | Blocking: | ||
| Notify when closed: | Platform: | all | |
| Project: | ChimeraX |
Description
The following bug report has been submitted:
Platform: Darwin-17.7.0-x86_64-i386-64bit
ChimeraX Version: 0.91 (2019-10-05)
Description
Last time you used ChimeraX it crashed.
Please describe steps that led to the crash here.
Process: ChimeraX [1608]
Path: /Applications/ChimeraX_Daily.app/Contents/MacOS/ChimeraX
Identifier: edu.ucsf.cgl.ChimeraX
Version: 0.91.0 (0.91.0.0)
Code Type: X86-64 (Native)
Parent Process: ??? [1]
Responsible: ChimeraX [1608]
User ID: 502
Date/Time: 2019-10-09 13:58:11.134 -0700
OS Version: Mac OS X 10.13.6 (17G65)
Report Version: 12
Anonymous UUID: 6394C82B-4D91-B299-33C3-CB00F63E7D66
Time Awake Since Boot: 13000 seconds
System Integrity Protection: enabled
Crashed Thread: 0 CrBrowserMain Dispatch queue: com.apple.main-thread
Exception Type: EXC_BAD_ACCESS (SIGSEGV)
Exception Codes: KERN_INVALID_ADDRESS at 0x000000012f952300
Exception Note: EXC_CORPSE_NOTIFY
VM Regions Near 0x12f952300:
MALLOC_LARGE 000000012f8bf000-000000012f93a000 [ 492K] rw-/rwx SM=PRV
-->
MALLOC_LARGE 000000012fa1d000-000000012fa81000 [ 400K] rw-/rwx SM=PRV
Thread 0 Crashed:: CrBrowserMain Dispatch queue: com.apple.main-thread
0 libsystem_kernel.dylib 0x00007fff4fe95b66 __pthread_kill + 10
1 libsystem_pthread.dylib 0x00007fff50060080 pthread_kill + 333
2 libsystem_c.dylib 0x00007fff4fda36fe raise + 26
3 libsystem_platform.dylib 0x00007fff50053f5a _sigtramp + 26
4 ??? 000000000000000000 0 + 0
5 org.python.python 0x00000001033f5f48 subtype_dealloc + 408
6 org.python.python 0x00000001033d65c9 free_keys_object + 137
7 org.python.python 0x00000001033d8cd8 dict_dealloc + 200
8 org.python.python 0x00000001033c2b46 func_dealloc + 198
9 org.python.python 0x00000001033d8c94 dict_dealloc + 132
10 org.python.python 0x00000001033f6264 subtype_dealloc + 1204
11 org.python.python 0x00000001033ed2d0 set_clear_internal + 528
12 org.python.python 0x00000001033f04c9 set_clear + 9
13 org.python.python 0x00000001033ac0fe _PyMethodDef_RawFastCallKeywords + 798
14 org.python.python 0x00000001033b1b82 _PyMethodDescr_FastCallKeywords + 82
15 org.python.python 0x000000010347505b call_function + 763
16 org.python.python 0x000000010346d660 _PyEval_EvalFrameDefault + 5536
17 org.python.python 0x00000001033ab893 function_code_fastcall + 195
18 org.python.python 0x0000000103475031 call_function + 721
19 org.python.python 0x000000010346d660 _PyEval_EvalFrameDefault + 5536
20 org.python.python 0x0000000103475c84 _PyEval_EvalCodeWithName + 2788
21 org.python.python 0x00000001033ab396 _PyFunction_FastCallKeywords + 230
22 org.python.python 0x0000000103475031 call_function + 721
23 org.python.python 0x000000010346d660 _PyEval_EvalFrameDefault + 5536
24 org.python.python 0x00000001033ab893 function_code_fastcall + 195
25 org.python.python 0x0000000103475031 call_function + 721
26 org.python.python 0x000000010346d70b _PyEval_EvalFrameDefault + 5707
27 org.python.python 0x0000000103475c84 _PyEval_EvalCodeWithName + 2788
28 org.python.python 0x00000001033ab396 _PyFunction_FastCallKeywords + 230
29 org.python.python 0x0000000103475031 call_function + 721
30 org.python.python 0x000000010346d67a _PyEval_EvalFrameDefault + 5562
31 org.python.python 0x00000001033ab893 function_code_fastcall + 195
32 org.python.python 0x0000000103475031 call_function + 721
33 org.python.python 0x000000010346d660 _PyEval_EvalFrameDefault + 5536
34 org.python.python 0x00000001033ab893 function_code_fastcall + 195
35 org.python.python 0x0000000103475031 call_function + 721
36 org.python.python 0x000000010346d660 _PyEval_EvalFrameDefault + 5536
37 org.python.python 0x0000000103475c84 _PyEval_EvalCodeWithName + 2788
38 org.python.python 0x00000001033ab396 _PyFunction_FastCallKeywords + 230
39 org.python.python 0x0000000103475031 call_function + 721
40 org.python.python 0x000000010346d660 _PyEval_EvalFrameDefault + 5536
41 org.python.python 0x00000001033ba228 gen_send_ex + 248
42 org.python.python 0x000000010346a254 builtin_next + 100
43 org.python.python 0x00000001033ac08e _PyMethodDef_RawFastCallKeywords + 686
44 org.python.python 0x00000001033ab3dc _PyCFunction_FastCallKeywords + 44
45 org.python.python 0x0000000103474fc9 call_function + 617
46 org.python.python 0x000000010346d70b _PyEval_EvalFrameDefault + 5707
47 org.python.python 0x00000001033ab893 function_code_fastcall + 195
48 org.python.python 0x00000001033ac3b6 _PyObject_Call_Prepend + 150
49 org.python.python 0x00000001033aac08 _PyObject_FastCallDict + 360
50 org.python.python 0x000000010346d3e5 _PyEval_EvalFrameDefault + 4901
51 org.python.python 0x0000000103475c84 _PyEval_EvalCodeWithName + 2788
52 org.python.python 0x00000001033ab396 _PyFunction_FastCallKeywords + 230
53 org.python.python 0x0000000103475031 call_function + 721
54 org.python.python 0x000000010346d7a9 _PyEval_EvalFrameDefault + 5865
55 org.python.python 0x0000000103475c84 _PyEval_EvalCodeWithName + 2788
56 org.python.python 0x00000001033ab396 _PyFunction_FastCallKeywords + 230
57 org.python.python 0x0000000103475031 call_function + 721
58 org.python.python 0x000000010346d70b _PyEval_EvalFrameDefault + 5707
59 org.python.python 0x00000001033ab893 function_code_fastcall + 195
60 org.python.python 0x0000000103475031 call_function + 721
61 org.python.python 0x000000010346d67a _PyEval_EvalFrameDefault + 5562
62 org.python.python 0x0000000103475c84 _PyEval_EvalCodeWithName + 2788
63 org.python.python 0x00000001033aae72 _PyFunction_FastCallDict + 450
64 QtCore.so 0x00000001115c4f17 PyQtSlot::call(_object*, _object*) const + 39
65 QtCore.so 0x00000001115c4e26 PyQtSlot::invoke(void**, _object*, void*, bool) const + 374
66 QtCore.so 0x00000001115c5925 PyQtSlotProxy::unislot(void**) + 85
67 QtCore.so 0x00000001115c589a PyQtSlotProxy::qt_metacall(QMetaObject::Call, int, void**) + 58
68 QtCore 0x00000001110ac5cd QMetaObject::activate(QObject*, int, int, void**) + 1773
69 QtWidgets 0x00000001103a8185 QAction::activate(QAction::ActionEvent) + 309
70 QtCore 0x00000001110a51d1 QObject::event(QEvent*) + 753
71 QtWidgets.so 0x000000010ff81810 sipQAction::event(QEvent*) + 192
72 QtWidgets 0x00000001103b176d QApplicationPrivate::notify_helper(QObject*, QEvent*) + 269
73 QtWidgets 0x00000001103b2b72 QApplication::notify(QObject*, QEvent*) + 594
74 QtWidgets.so 0x000000010ff803ca sipQApplication::notify(QObject*, QEvent*) + 234
75 QtCore 0x000000011107b7c4 QCoreApplication::notifyInternal2(QObject*, QEvent*) + 212
76 QtCore 0x000000011107c9fe QCoreApplicationPrivate::sendPostedEvents(QObject*, int, QThreadData*) + 878
77 libqcocoa.dylib 0x000000011abffd69 0x11abca000 + 220521
78 libqcocoa.dylib 0x000000011ac004d8 0x11abca000 + 222424
79 com.apple.CoreFoundation 0x00007fff27f09a11 __CFRUNLOOP_IS_CALLING_OUT_TO_A_SOURCE0_PERFORM_FUNCTION__ + 17
80 com.apple.CoreFoundation 0x00007fff27fc342c __CFRunLoopDoSource0 + 108
81 com.apple.CoreFoundation 0x00007fff27eec4cc __CFRunLoopDoSources0 + 300
82 com.apple.CoreFoundation 0x00007fff27eeb8ed __CFRunLoopRun + 1293
83 com.apple.CoreFoundation 0x00007fff27eeb153 CFRunLoopRunSpecific + 483
84 com.apple.HIToolbox 0x00007fff271d5d96 RunCurrentEventLoopInMode + 286
85 com.apple.HIToolbox 0x00007fff271d5b06 ReceiveNextEventCommon + 613
86 com.apple.HIToolbox 0x00007fff271d5884 _BlockUntilNextEventMatchingListInModeWithFilter + 64
87 com.apple.AppKit 0x00007fff25486a73 _DPSNextEvent + 2085
88 com.apple.AppKit 0x00007fff25c1ce34 -[NSApplication(NSEvent) _nextEventMatchingEventMask:untilDate:inMode:dequeue:] + 3044
89 com.apple.AppKit 0x00007fff2547b885 -[NSApplication run] + 764
90 libqcocoa.dylib 0x000000011abff253 0x11abca000 + 217683
91 QtCore 0x0000000111076ddf QEventLoop::exec(QFlags) + 431
92 QtCore 0x000000011107bdd2 QCoreApplication::exec() + 130
93 QtWidgets.so 0x000000011006f7d2 meth_QApplication_exec_(_object*, _object*) + 82
94 org.python.python 0x00000001033abedb _PyMethodDef_RawFastCallKeywords + 251
95 org.python.python 0x00000001033ab3dc _PyCFunction_FastCallKeywords + 44
96 org.python.python 0x0000000103474fc9 call_function + 617
97 org.python.python 0x000000010346d67a _PyEval_EvalFrameDefault + 5562
98 org.python.python 0x00000001033ab893 function_code_fastcall + 195
99 org.python.python 0x0000000103475031 call_function + 721
100 org.python.python 0x000000010346d67a _PyEval_EvalFrameDefault + 5562
101 org.python.python 0x0000000103475c84 _PyEval_EvalCodeWithName + 2788
102 org.python.python 0x00000001033ab396 _PyFunction_FastCallKeywords + 230
103 org.python.python 0x0000000103475031 call_function + 721
104 org.python.python 0x000000010346d70b _PyEval_EvalFrameDefault + 5707
105 org.python.python 0x0000000103475c84 _PyEval_EvalCodeWithName + 2788
106 org.python.python 0x000000010346c020 PyEval_EvalCode + 48
107 org.python.python 0x0000000103469683 builtin_exec + 563
108 org.python.python 0x00000001033ac08e _PyMethodDef_RawFastCallKeywords + 686
109 org.python.python 0x00000001033ab3dc _PyCFunction_FastCallKeywords + 44
110 org.python.python 0x0000000103474fc9 call_function + 617
111 org.python.python 0x000000010346d70b _PyEval_EvalFrameDefault + 5707
112 org.python.python 0x0000000103475c84 _PyEval_EvalCodeWithName + 2788
113 org.python.python 0x00000001033ab396 _PyFunction_FastCallKeywords + 230
114 org.python.python 0x0000000103475031 call_function + 721
115 org.python.python 0x000000010346d70b _PyEval_EvalFrameDefault + 5707
116 org.python.python 0x0000000103475c84 _PyEval_EvalCodeWithName + 2788
117 org.python.python 0x00000001033aae72 _PyFunction_FastCallDict + 450
118 org.python.python 0x00000001034ca0e3 pymain_run_module + 147
119 org.python.python 0x00000001034c91a1 pymain_main + 5041
120 org.python.python 0x00000001034c7de3 Py_Main + 51
121 edu.ucsf.cgl.ChimeraX 0x0000000103382e01 main + 593
122 libdyld.dylib 0x00007fff4fd45015 start + 1
Thread 1:: com.apple.NSEventThread
0 libsystem_kernel.dylib 0x00007fff4fe8c20a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff4fe8b724 mach_msg + 60
2 com.apple.CoreFoundation 0x00007fff27eec785 __CFRunLoopServiceMachPort + 341
3 com.apple.CoreFoundation 0x00007fff27eebad7 __CFRunLoopRun + 1783
4 com.apple.CoreFoundation 0x00007fff27eeb153 CFRunLoopRunSpecific + 483
5 com.apple.AppKit 0x00007fff255c3fc4 _NSEventThread + 184
6 libsystem_pthread.dylib 0x00007fff5005d661 _pthread_body + 340
7 libsystem_pthread.dylib 0x00007fff5005d50d _pthread_start + 377
8 libsystem_pthread.dylib 0x00007fff5005cbf9 thread_start + 13
Thread 2:: NetworkConfigWatcher
0 libsystem_kernel.dylib 0x00007fff4fe8c20a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff4fe8b724 mach_msg + 60
2 QtWebEngineCore 0x0000000113e7d3ed 0x111cd2000 + 35304429
3 QtWebEngineCore 0x0000000113e7d2ef 0x111cd2000 + 35304175
4 QtWebEngineCore 0x0000000113e3111d 0x111cd2000 + 34992413
5 QtWebEngineCore 0x0000000113e5a145 0x111cd2000 + 35160389
6 QtWebEngineCore 0x0000000113eaca7c 0x111cd2000 + 35498620
7 QtWebEngineCore 0x0000000113eec7c7 0x111cd2000 + 35760071
8 libsystem_pthread.dylib 0x00007fff5005d661 _pthread_body + 340
9 libsystem_pthread.dylib 0x00007fff5005d50d _pthread_start + 377
10 libsystem_pthread.dylib 0x00007fff5005cbf9 thread_start + 13
Thread 3:: DnsConfigService
0 libsystem_kernel.dylib 0x00007fff4fe96bea kevent + 10
1 QtWebEngineCore 0x000000011413ea59 0x111cd2000 + 38193753
2 QtWebEngineCore 0x000000011413bd6d 0x111cd2000 + 38182253
3 QtWebEngineCore 0x0000000113ef2d8c 0x111cd2000 + 35786124
4 QtWebEngineCore 0x0000000113e5a145 0x111cd2000 + 35160389
5 QtWebEngineCore 0x0000000113eaca7c 0x111cd2000 + 35498620
6 QtWebEngineCore 0x0000000113eec7c7 0x111cd2000 + 35760071
7 libsystem_pthread.dylib 0x00007fff5005d661 _pthread_body + 340
8 libsystem_pthread.dylib 0x00007fff5005d50d _pthread_start + 377
9 libsystem_pthread.dylib 0x00007fff5005cbf9 thread_start + 13
Thread 4:: TaskSchedulerServiceThread
0 libsystem_kernel.dylib 0x00007fff4fe96bea kevent + 10
1 QtWebEngineCore 0x000000011413ea59 0x111cd2000 + 38193753
2 QtWebEngineCore 0x000000011413bd6d 0x111cd2000 + 38182253
3 QtWebEngineCore 0x0000000113ef2d74 0x111cd2000 + 35786100
4 QtWebEngineCore 0x0000000113e5a145 0x111cd2000 + 35160389
5 QtWebEngineCore 0x0000000113e9bb34 0x111cd2000 + 35429172
6 QtWebEngineCore 0x0000000113eaca7c 0x111cd2000 + 35498620
7 QtWebEngineCore 0x0000000113eec7c7 0x111cd2000 + 35760071
8 libsystem_pthread.dylib 0x00007fff5005d661 _pthread_body + 340
9 libsystem_pthread.dylib 0x00007fff5005d50d _pthread_start + 377
10 libsystem_pthread.dylib 0x00007fff5005cbf9 thread_start + 13
Thread 5:: TaskSchedulerForegroundWorker
0 libsystem_kernel.dylib 0x00007fff4fe8c20a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff4fe8b724 mach_msg + 60
2 QtWebEngineCore 0x0000000113e7d3ed 0x111cd2000 + 35304429
3 QtWebEngineCore 0x0000000113e7d4e1 0x111cd2000 + 35304673
4 QtWebEngineCore 0x0000000113e94de8 0x111cd2000 + 35401192
5 QtWebEngineCore 0x0000000113e9571b 0x111cd2000 + 35403547
6 QtWebEngineCore 0x0000000113e95384 0x111cd2000 + 35402628
7 QtWebEngineCore 0x0000000113eec7c7 0x111cd2000 + 35760071
8 libsystem_pthread.dylib 0x00007fff5005d661 _pthread_body + 340
9 libsystem_pthread.dylib 0x00007fff5005d50d _pthread_start + 377
10 libsystem_pthread.dylib 0x00007fff5005cbf9 thread_start + 13
Thread 6:: TaskSchedulerForegroundBlockingWorker
0 libsystem_kernel.dylib 0x00007fff4fe8c20a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff4fe8b724 mach_msg + 60
2 QtWebEngineCore 0x0000000113e7d3ed 0x111cd2000 + 35304429
3 QtWebEngineCore 0x0000000113e7d4e1 0x111cd2000 + 35304673
4 QtWebEngineCore 0x0000000113e94de8 0x111cd2000 + 35401192
5 QtWebEngineCore 0x0000000113e9571b 0x111cd2000 + 35403547
6 QtWebEngineCore 0x0000000113e95384 0x111cd2000 + 35402628
7 QtWebEngineCore 0x0000000113eec7c7 0x111cd2000 + 35760071
8 libsystem_pthread.dylib 0x00007fff5005d661 _pthread_body + 340
9 libsystem_pthread.dylib 0x00007fff5005d50d _pthread_start + 377
10 libsystem_pthread.dylib 0x00007fff5005cbf9 thread_start + 13
Thread 7:: TaskSchedulerBackgroundWorker
0 libsystem_kernel.dylib 0x00007fff4fe8c20a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff4fe8b724 mach_msg + 60
2 QtWebEngineCore 0x0000000113e7d3ed 0x111cd2000 + 35304429
3 QtWebEngineCore 0x0000000113e7d4e1 0x111cd2000 + 35304673
4 QtWebEngineCore 0x0000000113e94de8 0x111cd2000 + 35401192
5 QtWebEngineCore 0x0000000113e9571b 0x111cd2000 + 35403547
6 QtWebEngineCore 0x0000000113e952f4 0x111cd2000 + 35402484
7 QtWebEngineCore 0x0000000113eec7c7 0x111cd2000 + 35760071
8 libsystem_pthread.dylib 0x00007fff5005d661 _pthread_body + 340
9 libsystem_pthread.dylib 0x00007fff5005d50d _pthread_start + 377
10 libsystem_pthread.dylib 0x00007fff5005cbf9 thread_start + 13
Thread 8:: TaskSchedulerBackgroundBlockingWorker
0 libsystem_kernel.dylib 0x00007fff4fe8c20a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff4fe8b724 mach_msg + 60
2 QtWebEngineCore 0x0000000113e7d3ed 0x111cd2000 + 35304429
3 QtWebEngineCore 0x0000000113e7d4e1 0x111cd2000 + 35304673
4 QtWebEngineCore 0x0000000113e94de8 0x111cd2000 + 35401192
5 QtWebEngineCore 0x0000000113e9571b 0x111cd2000 + 35403547
6 QtWebEngineCore 0x0000000113e952f4 0x111cd2000 + 35402484
7 QtWebEngineCore 0x0000000113eec7c7 0x111cd2000 + 35760071
8 libsystem_pthread.dylib 0x00007fff5005d661 _pthread_body + 340
9 libsystem_pthread.dylib 0x00007fff5005d50d _pthread_start + 377
10 libsystem_pthread.dylib 0x00007fff5005cbf9 thread_start + 13
Thread 9:: Chrome_IOThread
0 libsystem_kernel.dylib 0x00007fff4fe96bea kevent + 10
1 QtWebEngineCore 0x000000011413ea59 0x111cd2000 + 38193753
2 QtWebEngineCore 0x000000011413bd6d 0x111cd2000 + 38182253
3 QtWebEngineCore 0x0000000113ef2d74 0x111cd2000 + 35786100
4 QtWebEngineCore 0x0000000113e5a145 0x111cd2000 + 35160389
5 QtWebEngineCore 0x00000001137c05d4 0x111cd2000 + 28239316
6 QtWebEngineCore 0x0000000113eaca7c 0x111cd2000 + 35498620
7 QtWebEngineCore 0x0000000113eec7c7 0x111cd2000 + 35760071
8 libsystem_pthread.dylib 0x00007fff5005d661 _pthread_body + 340
9 libsystem_pthread.dylib 0x00007fff5005d50d _pthread_start + 377
10 libsystem_pthread.dylib 0x00007fff5005cbf9 thread_start + 13
Thread 10:: TaskSchedulerSingleThreadSharedBackgroundBlocking0
0 libsystem_kernel.dylib 0x00007fff4fe8c20a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff4fe8b724 mach_msg + 60
2 QtWebEngineCore 0x0000000113e7d3ed 0x111cd2000 + 35304429
3 QtWebEngineCore 0x0000000113e7d2ef 0x111cd2000 + 35304175
4 QtWebEngineCore 0x0000000113e94dda 0x111cd2000 + 35401178
5 QtWebEngineCore 0x0000000113e9547f 0x111cd2000 + 35402879
6 QtWebEngineCore 0x0000000113e95324 0x111cd2000 + 35402532
7 QtWebEngineCore 0x0000000113eec7c7 0x111cd2000 + 35760071
8 libsystem_pthread.dylib 0x00007fff5005d661 _pthread_body + 340
9 libsystem_pthread.dylib 0x00007fff5005d50d _pthread_start + 377
10 libsystem_pthread.dylib 0x00007fff5005cbf9 thread_start + 13
Thread 11:: CompositorTileWorker1/74755
0 libsystem_kernel.dylib 0x00007fff4fe95a16 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff5005e589 _pthread_cond_wait + 732
2 QtWebEngineCore 0x0000000113eeb058 0x111cd2000 + 35754072
3 QtWebEngineCore 0x0000000114e73658 0x111cd2000 + 52041304
4 QtWebEngineCore 0x0000000113eab754 0x111cd2000 + 35493716
5 QtWebEngineCore 0x0000000113eec7c7 0x111cd2000 + 35760071
6 libsystem_pthread.dylib 0x00007fff5005d661 _pthread_body + 340
7 libsystem_pthread.dylib 0x00007fff5005d50d _pthread_start + 377
8 libsystem_pthread.dylib 0x00007fff5005cbf9 thread_start + 13
Thread 12:: AudioThread
0 libsystem_kernel.dylib 0x00007fff4fe8c20a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff4fe8b724 mach_msg + 60
2 QtWebEngineCore 0x0000000113e7d3ed 0x111cd2000 + 35304429
3 QtWebEngineCore 0x0000000113e7d2ef 0x111cd2000 + 35304175
4 QtWebEngineCore 0x0000000113e3111d 0x111cd2000 + 34992413
5 QtWebEngineCore 0x0000000113e5a145 0x111cd2000 + 35160389
6 QtWebEngineCore 0x0000000113eaca7c 0x111cd2000 + 35498620
7 QtWebEngineCore 0x0000000113eec7c7 0x111cd2000 + 35760071
8 libsystem_pthread.dylib 0x00007fff5005d661 _pthread_body + 340
9 libsystem_pthread.dylib 0x00007fff5005d50d _pthread_start + 377
10 libsystem_pthread.dylib 0x00007fff5005cbf9 thread_start + 13
Thread 13:: NetworkConfigWatcher
0 libsystem_kernel.dylib 0x00007fff4fe8c20a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff4fe8b724 mach_msg + 60
2 QtWebEngineCore 0x0000000113e7d3ed 0x111cd2000 + 35304429
3 QtWebEngineCore 0x0000000113e7d2ef 0x111cd2000 + 35304175
4 QtWebEngineCore 0x0000000113e3111d 0x111cd2000 + 34992413
5 QtWebEngineCore 0x0000000113e5a145 0x111cd2000 + 35160389
6 QtWebEngineCore 0x0000000113eaca7c 0x111cd2000 + 35498620
7 QtWebEngineCore 0x0000000113eec7c7 0x111cd2000 + 35760071
8 libsystem_pthread.dylib 0x00007fff5005d661 _pthread_body + 340
9 libsystem_pthread.dylib 0x00007fff5005d50d _pthread_start + 377
10 libsystem_pthread.dylib 0x00007fff5005cbf9 thread_start + 13
Thread 14:: Chrome_InProcGpuThread
0 libsystem_kernel.dylib 0x00007fff4fe8c20a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff4fe8b724 mach_msg + 60
2 QtWebEngineCore 0x0000000113e7d3ed 0x111cd2000 + 35304429
3 QtWebEngineCore 0x0000000113e31112 0x111cd2000 + 34992402
4 QtWebEngineCore 0x0000000113e5a145 0x111cd2000 + 35160389
5 QtWebEngineCore 0x0000000113eaca7c 0x111cd2000 + 35498620
6 QtWebEngineCore 0x0000000113eec7c7 0x111cd2000 + 35760071
7 libsystem_pthread.dylib 0x00007fff5005d661 _pthread_body + 340
8 libsystem_pthread.dylib 0x00007fff5005d50d _pthread_start + 377
9 libsystem_pthread.dylib 0x00007fff5005cbf9 thread_start + 13
Thread 15:: Chrome_ChildIOThread
0 libsystem_kernel.dylib 0x00007fff4fe96bea kevent + 10
1 QtWebEngineCore 0x000000011413ea59 0x111cd2000 + 38193753
2 QtWebEngineCore 0x000000011413bd6d 0x111cd2000 + 38182253
3 QtWebEngineCore 0x0000000113ef2d8c 0x111cd2000 + 35786124
4 QtWebEngineCore 0x0000000113e5a145 0x111cd2000 + 35160389
5 QtWebEngineCore 0x0000000113eaca7c 0x111cd2000 + 35498620
6 QtWebEngineCore 0x0000000113eec7c7 0x111cd2000 + 35760071
7 libsystem_pthread.dylib 0x00007fff5005d661 _pthread_body + 340
8 libsystem_pthread.dylib 0x00007fff5005d50d _pthread_start + 377
9 libsystem_pthread.dylib 0x00007fff5005cbf9 thread_start + 13
Thread 16:: TaskSchedulerSingleThreadForegroundBlocking1
0 libsystem_kernel.dylib 0x00007fff4fe8c20a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff4fe8b724 mach_msg + 60
2 QtWebEngineCore 0x0000000113e7d3ed 0x111cd2000 + 35304429
3 QtWebEngineCore 0x0000000113e7d2ef 0x111cd2000 + 35304175
4 QtWebEngineCore 0x0000000113e94dda 0x111cd2000 + 35401178
5 QtWebEngineCore 0x0000000113e9571b 0x111cd2000 + 35403547
6 QtWebEngineCore 0x0000000113e953e4 0x111cd2000 + 35402724
7 QtWebEngineCore 0x0000000113eec7c7 0x111cd2000 + 35760071
8 libsystem_pthread.dylib 0x00007fff5005d661 _pthread_body + 340
9 libsystem_pthread.dylib 0x00007fff5005d50d _pthread_start + 377
10 libsystem_pthread.dylib 0x00007fff5005cbf9 thread_start + 13
Thread 17:: QFileInfoGatherer
0 libsystem_kernel.dylib 0x00007fff4fe95a16 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff5005e589 _pthread_cond_wait + 732
2 QtCore 0x0000000110ebcc9b 0x110e92000 + 175259
3 QtCore 0x0000000110ebcbfc QWaitCondition::wait(QMutex*, QDeadlineTimer) + 108
4 QtWidgets 0x00000001105dc7a2 0x1103a1000 + 2340770
5 QtCore 0x0000000110eb44a3 0x110e92000 + 140451
6 libsystem_pthread.dylib 0x00007fff5005d661 _pthread_body + 340
7 libsystem_pthread.dylib 0x00007fff5005d50d _pthread_start + 377
8 libsystem_pthread.dylib 0x00007fff5005cbf9 thread_start + 13
Thread 18:: NetworkConfigWatcher
0 libsystem_kernel.dylib 0x00007fff4fe8c20a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff4fe8b724 mach_msg + 60
2 QtWebEngineCore 0x0000000113e7d3ed 0x111cd2000 + 35304429
3 QtWebEngineCore 0x0000000113e7d2ef 0x111cd2000 + 35304175
4 QtWebEngineCore 0x0000000113e3111d 0x111cd2000 + 34992413
5 QtWebEngineCore 0x0000000113e5a145 0x111cd2000 + 35160389
6 QtWebEngineCore 0x0000000113eaca7c 0x111cd2000 + 35498620
7 QtWebEngineCore 0x0000000113eec7c7 0x111cd2000 + 35760071
8 libsystem_pthread.dylib 0x00007fff5005d661 _pthread_body + 340
9 libsystem_pthread.dylib 0x00007fff5005d50d _pthread_start + 377
10 libsystem_pthread.dylib 0x00007fff5005cbf9 thread_start + 13
Thread 19:
0 libsystem_kernel.dylib 0x00007fff4fe9628a __workq_kernreturn + 10
1 libsystem_pthread.dylib 0x00007fff5005d009 _pthread_wqthread + 1035
2 libsystem_pthread.dylib 0x00007fff5005cbe9 start_wqthread + 13
Thread 20:: TaskSchedulerForegroundBlockingWorker
0 libsystem_kernel.dylib 0x00007fff4fe8c20a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff4fe8b724 mach_msg + 60
2 QtWebEngineCore 0x0000000113e7d3ed 0x111cd2000 + 35304429
3 QtWebEngineCore 0x0000000113e7d4e1 0x111cd2000 + 35304673
4 QtWebEngineCore 0x0000000113e94de8 0x111cd2000 + 35401192
5 QtWebEngineCore 0x0000000113e9547f 0x111cd2000 + 35402879
6 QtWebEngineCore 0x0000000113e95384 0x111cd2000 + 35402628
7 QtWebEngineCore 0x0000000113eec7c7 0x111cd2000 + 35760071
8 libsystem_pthread.dylib 0x00007fff5005d661 _pthread_body + 340
9 libsystem_pthread.dylib 0x00007fff5005d50d _pthread_start + 377
10 libsystem_pthread.dylib 0x00007fff5005cbf9 thread_start + 13
Thread 21:
0 libsystem_kernel.dylib 0x00007fff4fe95a16 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff5005e589 _pthread_cond_wait + 732
2 libopenblasp-r0.3.7.dev.dylib 0x0000000104cc3c0b blas_thread_server + 619
3 libsystem_pthread.dylib 0x00007fff5005d661 _pthread_body + 340
4 libsystem_pthread.dylib 0x00007fff5005d50d _pthread_start + 377
5 libsystem_pthread.dylib 0x00007fff5005cbf9 thread_start + 13
Thread 22:
0 libsystem_kernel.dylib 0x00007fff4fe95a16 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff5005e589 _pthread_cond_wait + 732
2 libopenblasp-r0.3.7.dev.dylib 0x0000000104cc3c0b blas_thread_server + 619
3 libsystem_pthread.dylib 0x00007fff5005d661 _pthread_body + 340
4 libsystem_pthread.dylib 0x00007fff5005d50d _pthread_start + 377
5 libsystem_pthread.dylib 0x00007fff5005cbf9 thread_start + 13
Thread 23:
0 libsystem_kernel.dylib 0x00007fff4fe95a16 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff5005e589 _pthread_cond_wait + 732
2 libopenblasp-r0.3.7.dev.dylib 0x0000000104cc3c0b blas_thread_server + 619
3 libsystem_pthread.dylib 0x00007fff5005d661 _pthread_body + 340
4 libsystem_pthread.dylib 0x00007fff5005d50d _pthread_start + 377
5 libsystem_pthread.dylib 0x00007fff5005cbf9 thread_start + 13
Thread 24:
0 libsystem_pthread.dylib 0x00007fff5005cbdc start_wqthread + 0
1 ??? 0x0000000100000038 0 + 4294967352
Thread 25:
0 libsystem_kernel.dylib 0x00007fff4fe95a16 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff5005e589 _pthread_cond_wait + 732
2 org.python.python 0x00000001034b5a96 PyThread_acquire_lock_timed + 390
3 org.python.python 0x00000001034fd0f6 acquire_timed + 134
4 org.python.python 0x00000001034fce7c lock_PyThread_acquire_lock + 44
5 org.python.python 0x00000001033ac0ca _PyMethodDef_RawFastCallKeywords + 746
6 org.python.python 0x00000001033b1b82 _PyMethodDescr_FastCallKeywords + 82
7 org.python.python 0x000000010347505b call_function + 763
8 org.python.python 0x000000010346d660 _PyEval_EvalFrameDefault + 5536
9 org.python.python 0x0000000103475c84 _PyEval_EvalCodeWithName + 2788
10 org.python.python 0x00000001033ab396 _PyFunction_FastCallKeywords + 230
11 org.python.python 0x0000000103475031 call_function + 721
12 org.python.python 0x000000010346d660 _PyEval_EvalFrameDefault + 5536
13 org.python.python 0x0000000103475c84 _PyEval_EvalCodeWithName + 2788
14 org.python.python 0x00000001033ab396 _PyFunction_FastCallKeywords + 230
15 org.python.python 0x0000000103475031 call_function + 721
16 org.python.python 0x000000010346d660 _PyEval_EvalFrameDefault + 5536
17 org.python.python 0x00000001033ab893 function_code_fastcall + 195
18 org.python.python 0x0000000103475031 call_function + 721
19 org.python.python 0x000000010346d660 _PyEval_EvalFrameDefault + 5536
20 org.python.python 0x00000001033ab893 function_code_fastcall + 195
21 org.python.python 0x0000000103475031 call_function + 721
22 org.python.python 0x000000010346d660 _PyEval_EvalFrameDefault + 5536
23 org.python.python 0x00000001033ab893 function_code_fastcall + 195
24 org.python.python 0x00000001033ac3b6 _PyObject_Call_Prepend + 150
25 org.python.python 0x00000001033ab4f8 PyObject_Call + 136
26 org.python.python 0x00000001034fd9d7 t_bootstrap + 71
27 org.python.python 0x00000001034b56d9 pythread_wrapper + 25
28 libsystem_pthread.dylib 0x00007fff5005d661 _pthread_body + 340
29 libsystem_pthread.dylib 0x00007fff5005d50d _pthread_start + 377
30 libsystem_pthread.dylib 0x00007fff5005cbf9 thread_start + 13
Thread 26:: TaskSchedulerForegroundWorker
0 libsystem_kernel.dylib 0x00007fff4fe8c20a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff4fe8b724 mach_msg + 60
2 QtWebEngineCore 0x0000000113e7d3ed 0x111cd2000 + 35304429
3 QtWebEngineCore 0x0000000113e7d4e1 0x111cd2000 + 35304673
4 QtWebEngineCore 0x0000000113e94de8 0x111cd2000 + 35401192
5 QtWebEngineCore 0x0000000113e9547f 0x111cd2000 + 35402879
6 QtWebEngineCore 0x0000000113e95384 0x111cd2000 + 35402628
7 QtWebEngineCore 0x0000000113eec7c7 0x111cd2000 + 35760071
8 libsystem_pthread.dylib 0x00007fff5005d661 _pthread_body + 340
9 libsystem_pthread.dylib 0x00007fff5005d50d _pthread_start + 377
10 libsystem_pthread.dylib 0x00007fff5005cbf9 thread_start + 13
Thread 0 crashed with X86 Thread State (64-bit):
rax: 0x0000000000000000 rbx: 0x00007fff88845380 rcx: 0x00000001037d9a48 rdx: 0x0000000000000000
rdi: 0x0000000000000307 rsi: 0x000000000000000b rbp: 0x00000001037d9a80 rsp: 0x00000001037d9a48
r8: 0x00000001037d9f48 r9: 0x0000000000000000 r10: 0x00007fff888453c8 r11: 0x0000000000000287
r12: 0x0000000000000307 r13: 0x000000012f952310 r14: 0x000000000000000b r15: 0x000000000000002d
rip: 0x00007fff4fe95b66 rfl: 0x0000000000000286 cr2: 0x00000001035d4124
Logical CPU: 0
Error Code: 0x02000148
Trap Number: 133
Binary Images:
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0x7fff4fd70000 - 0x7fff4fd70ff7 liblaunch.dylib (1205.70.9) /usr/lib/system/liblaunch.dylib
0x7fff4fd71000 - 0x7fff4fd75ffb libmacho.dylib (906) /usr/lib/system/libmacho.dylib
0x7fff4fd76000 - 0x7fff4fd78ff3 libquarantine.dylib (86) /usr/lib/system/libquarantine.dylib
0x7fff4fd79000 - 0x7fff4fd7aff3 libremovefile.dylib (45) /usr/lib/system/libremovefile.dylib
0x7fff4fd7b000 - 0x7fff4fd92fff libsystem_asl.dylib (356.70.1) /usr/lib/system/libsystem_asl.dylib
0x7fff4fd93000 - 0x7fff4fd93fff libsystem_blocks.dylib (67) /usr/lib/system/libsystem_blocks.dylib
0x7fff4fd94000 - 0x7fff4fe1dff7 libsystem_c.dylib (1244.50.9) /usr/lib/system/libsystem_c.dylib
0x7fff4fe1e000 - 0x7fff4fe21ffb libsystem_configuration.dylib (963.50.8) /usr/lib/system/libsystem_configuration.dylib
0x7fff4fe22000 - 0x7fff4fe25ffb libsystem_coreservices.dylib (51) /usr/lib/system/libsystem_coreservices.dylib
0x7fff4fe26000 - 0x7fff4fe27fff libsystem_darwin.dylib (1244.50.9) /usr/lib/system/libsystem_darwin.dylib
0x7fff4fe28000 - 0x7fff4fe2eff7 libsystem_dnssd.dylib (878.70.2) /usr/lib/system/libsystem_dnssd.dylib
0x7fff4fe2f000 - 0x7fff4fe78ff7 libsystem_info.dylib (517.30.1) /usr/lib/system/libsystem_info.dylib
0x7fff4fe79000 - 0x7fff4fe9fff7 libsystem_kernel.dylib (4570.71.2) /usr/lib/system/libsystem_kernel.dylib
0x7fff4fea0000 - 0x7fff4feebfcb libsystem_m.dylib (3147.50.1) /usr/lib/system/libsystem_m.dylib
0x7fff4feec000 - 0x7fff4ff0bfff libsystem_malloc.dylib (140.50.6) /usr/lib/system/libsystem_malloc.dylib
0x7fff4ff0c000 - 0x7fff5003cff7 libsystem_network.dylib (1229.70.2) /usr/lib/system/libsystem_network.dylib
0x7fff5003d000 - 0x7fff50047ffb libsystem_networkextension.dylib (767.70.1) /usr/lib/system/libsystem_networkextension.dylib
0x7fff50048000 - 0x7fff50051ff3 libsystem_notify.dylib (172) /usr/lib/system/libsystem_notify.dylib
0x7fff50052000 - 0x7fff50059ff7 libsystem_platform.dylib (161.50.1) /usr/lib/system/libsystem_platform.dylib
0x7fff5005a000 - 0x7fff50065fff libsystem_pthread.dylib (301.50.1) /usr/lib/system/libsystem_pthread.dylib
0x7fff50066000 - 0x7fff50069fff libsystem_sandbox.dylib (765.70.1) /usr/lib/system/libsystem_sandbox.dylib
0x7fff5006a000 - 0x7fff5006bff3 libsystem_secinit.dylib (30) /usr/lib/system/libsystem_secinit.dylib
0x7fff5006c000 - 0x7fff50073ff7 libsystem_symptoms.dylib (820.60.2) /usr/lib/system/libsystem_symptoms.dylib
0x7fff50074000 - 0x7fff50087fff libsystem_trace.dylib (829.70.1) /usr/lib/system/libsystem_trace.dylib
0x7fff50089000 - 0x7fff5008eff7 libunwind.dylib (35.3) /usr/lib/system/libunwind.dylib
0x7fff5008f000 - 0x7fff500bcff7 libxpc.dylib (1205.70.9) /usr/lib/system/libxpc.dylib
External Modification Summary:
Calls made by other processes targeting this process:
task_for_pid: 3
thread_create: 0
thread_set_state: 0
Calls made by this process:
task_for_pid: 0
thread_create: 0
thread_set_state: 0
Calls made by all processes on this machine:
task_for_pid: 7927
thread_create: 0
thread_set_state: 0
VM Region Summary:
ReadOnly portion of Libraries: Total=677.3M resident=0K(0%) swapped_out_or_unallocated=677.3M(100%)
Writable regions: Total=1.1G written=0K(0%) resident=0K(0%) swapped_out=0K(0%) unallocated=1.1G(100%)
VIRTUAL REGION
REGION TYPE SIZE COUNT (non-coalesced)
=========== ======= =======
Accelerate framework 256K 3
Activity Tracing 256K 2
CG backing stores 30.8M 7
CG image 572K 26
CoreAnimation 212K 32
CoreGraphics 8K 2
CoreImage 280K 40
CoreUI image data 5672K 31
CoreUI image file 216K 5
Foundation 4K 2
Image IO 64K 2
Kernel Alloc Once 8K 2
MALLOC 770.2M 174
MALLOC guard page 48K 11
MALLOC_LARGE (reserved) 384K 2 reserved VM address space (unallocated)
Memory Tag 242 12K 2
Memory Tag 251 36K 3
OpenGL GLSL 512K 7
PROTECTED_MEMORY 4K 2
STACK GUARD 104K 27
Stack 160.7M 28
Stack Guard 56.0M 2
VM_ALLOCATE 155.4M 175
VM_ALLOCATE (reserved) 32.0M 2 reserved VM address space (unallocated)
__DATA 48.2M 492
__FONT_DATA 4K 2
__GLSLBUILTINS 2588K 2
__LINKEDIT 212.9M 134
__TEXT 464.3M 466
__UNICODE 560K 2
mapped file 83.0M 90
shared memory 660K 18
=========== ======= =======
TOTAL 2.0G 1763
TOTAL, minus reserved VM space 1.9G 1763
Log:
UCSF ChimeraX version: 0.91 (2019-10-05)
© 2016-2019 Regents of the University of California. All rights reserved.
How to cite UCSF ChimeraX
OpenGL version: 4.1 ATI-1.68.20
OpenGL renderer: AMD Radeon Pro 570 OpenGL Engine
OpenGL vendor: ATI Technologies Inc.
Change History (3)
comment:1 by , 6 years ago
| Cc: | added |
|---|---|
| Component: | Unassigned → Core |
| Owner: | set to |
| Platform: | → all |
| Project: | → ChimeraX |
| Status: | new → accepted |
| Summary: | ChimeraX bug report submission → Crash in free_keys_object/subtype_dealloc |
comment:2 by , 6 years ago
comment:3 by , 6 years ago
| Resolution: | → can't reproduce |
|---|---|
| Status: | accepted → closed |
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Seems like a set.clear() is causing a subtype to be freed, and mayhem ensues.