Opened 6 years ago

Closed 6 years ago

#2337 closed defect (duplicate)

View changes/resets when model shown

Reported by: yazan.abbas@… Owned by: Tom Goddard
Priority: normal Milestone:
Component: Graphics Version:
Keywords: Cc:
Blocked By: Blocking:
Notify when closed: Platform: all
Project: ChimeraX

Description

The following bug report has been submitted:
Platform:        Linux-4.15.0-55-generic-x86_64-with-debian-stretch-sid
ChimeraX Version: 0.91 (2019-08-13)
Description
view sometimes changes/resets when showing a model

Log:
UCSF ChimeraX version: 0.91 (2019-08-13)  
© 2016-2019 Regents of the University of California. All rights reserved.  
How to cite UCSF ChimeraX  

> open /home/yazan/Dropbox/Abbas_etal_2019_brainV-
ATPase/Figures/FigureS9_cring_in_rotstate2and3/figS9_2.cxs format session

opened ChimeraX session  

> volume #7-15 style surface surfaceSmoothing true smoothingIterations 4
smoothingFactor 0.5 subdivideSurface true subdivisionLevels 1 smoothLines true
squareMesh true dimTransparency true meshLighting true

> color a1 #8ef826

> color b1 #9d42bf

> color cring1 #f4b0ef

> color d1 #96cff7

> color e1 #3465a4

> color f1 #CC0000

> color Ac451 #B2B2FF

Expected a collection of one of 'All', 'atoms', 'bonds', 'cartoons',
'pseudobonds', 'ribbons', 'rings', or 'surfaces' or a keyword  

> color a2 #8ef826

> color b2 #9d42bf

> color cring2 #f4b0ef

> color d2 #96cff7

> color e2 #3465a4

> color f2 #CC0000

> color Ac452 #B2B2FF

> color PRR2 #edd400

> color a3 #8ef826

> color b3 #9d42bf

> color cring3 #f4b0ef

> color d3 #96cff7

> color e3 #3465a4

> color f3 #CC0000

> color Ac453 #B2B2FF

> color PRR3 #edd400

> surface dust #4-15 size 40

> show a1 target c

> hide antdtohide target c

> show e1 target c

> show f1 target c

> lighting gentle shadows true intensity 0.2 qualityOfShadows normal direction
0,0,-1 multiShadow 512

> lighting gentle shadows true intensity 0.2 qualityOfShadows normal direction
0,0,-1 multiShadow 256

> lighting gentle shadows true intensity 0.2 qualityOfShadows normal direction
0,0,-1 multiShadow 128

> lighting soft shadows true intensity 0.2 qualityOfShadows normal direction
0,0,-1 multiShadow 128

> lighting soft shadows true intensity 0.2 qualityOfShadows normal direction
0,0,-1 multiShadow 256

> set silhouetteWidth 5

> save image /home/yazan/Dropbox/Abbas_etal_2019_brainV-
ATPase/Figures/FigureS9_cring_in_rotstate2and3/output/top1.png width 3600
height 3600 transparentBackground true

> lighting gentle shadows true intensity 0.2 qualityOfShadows normal direction
0,0,-1 multiShadow 1024

> lighting gentle shadows true intensity 0.1 qualityOfShadows normal direction
0,0,-1 multiShadow 1024

> lighting gentle shadows true intensity 0.1 qualityOfShadows normal direction
0,0,-1 multiShadow 512

> lighting gentle shadows true intensity 0.2 qualityOfShadows normal direction
0,0,-1 multiShadow 512

> lighting gentle shadows true intensity 0.1 qualityOfShadows normal direction
0,0,-1 multiShadow 512

> lighting gentle shadows true intensity 0.1 qualityOfShadows normal direction
0,0,-1 multiShadow 256

> save image /home/yazan/Dropbox/Abbas_etal_2019_brainV-
ATPase/Figures/FigureS9_cring_in_rotstate2and3/output/top1.png width 3600
height 3600 transparentBackground true

> hide a1 target c

> hide e1 target c

> hide f1 target c

> hide surfaces

> hide cring1 target c

> select up

1147 atoms, 1169 bonds, 2 models selected  

> hide sel cartoons

> save image /home/yazan/Dropbox/Abbas_etal_2019_brainV-
ATPase/Figures/FigureS9_cring_in_rotstate2and3/output/top1_2.png width 3600
height 3600 transparentBackground true

Unknown command: silhouetteD  

> set silhouetteDepthJump 0.03

> set silhouetteDepthJump 0.01

> set silhouetteDepthJump 0.02

> set silhouetteDepthJump 0.03

> save image /home/yazan/Dropbox/Abbas_etal_2019_brainV-
ATPase/Figures/FigureS9_cring_in_rotstate2and3/output/top1_2.png width 3600
height 3600 transparentBackground true

> view list

Named views: side1, side1_2, side2, side2_2, side3, side3_2, top1, top2, top3  

> view side1

> show d1 target c

> view list

Named views: side1, side1_2, side2, side2_2, side3, side3_2, top1, top2, top3  

> view side1




OpenGL version: 3.3.0 NVIDIA 418.56
OpenGL renderer: GeForce RTX 2070/PCIe/SSE2
OpenGL vendor: NVIDIA Corporation

Change History (2)

comment:1 by Eric Pettersen, 6 years ago

Component: UnassignedGraphics
Owner: set to Tom Goddard
Platform: all
Project: ChimeraX
Status: newassigned
Summary: ChimeraX bug report submissionView changes/resets when model shown

Tom Goddard is on vacation until early next week, so it may be awhile before you get a reply to this.

comment:2 by Tom Goddard, 6 years ago

Resolution: duplicate
Status: assignedclosed

Probably fixed. On August 15, 2019 I fixed a bug where view would change showing a model after a session is restored.

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