Opened 6 years ago

Closed 6 years ago

Last modified 6 years ago

#2215 closed defect (duplicate)

Incorrect version of Clipper installed in ChimeraX 0.9

Reported by: zhijie.li@… Owned by: Conrad Huang
Priority: normal Milestone:
Component: Tool Shed Version:
Keywords: Cc:
Blocked By: Blocking:
Notify when closed: Platform: all
Project: ChimeraX

Description 

The following bug report has been submitted:
Platform:        Linux-4.15.0-54-generic-x86_64-with-debian-stretch-sid
ChimeraX Version: 0.9 (2019-06-06)
Description
In ISODLE, triggered by a mouse wheel scroll 

Log:
Startup Messages  
---  
warning | 'clip' is a prefix of an existing command 'clipper'  
  
UCSF ChimeraX version: 0.9 (2019-06-06)  
© 2016-2019 Regents of the University of California. All rights reserved.  
How to cite UCSF ChimeraX  

> toolshed show ISOLDE

> set selectionWidth 4

before.pdb title:  
Crystal structure of etub from clostridium kluyveri [more info...]  
  
Chain information for before.pdb #1  
---  
Chain | Description  
A | predicted microcompartment protein  
  
Done loading forcefield  
before.pdb title:  
Crystal structure of etub from clostridium kluyveri [more info...]  
  
Chain information for before.pdb  
---  
Chain | Description  
1.3/A | predicted microcompartment protein  
  

WARNING: multiple experimental reflection datasets found:  
(dataset) FOBS, SIGFOBS,  
(dataset) IOBS, SIGIOBS,  
(dataset) DANO, SIGDANO,  
(dataset) F(+), SIGF(+), F(-), SIGF(-),  
(dataset) I(+), SIGI(+), I(-), SIGI(-)  
Automatically choosing "(dataset) IOBS, SIGIOBS".  

Reflection data provided as intensities. Performing French & Wilson scaling to
convert to amplitudes...  

> ~select #1

2 models selected  

> close #1

> open 1a0m structureFactors true

Summary of feedback from opening 1a0m fetched from pdb  
---  
warning | No free flags detected in this dataset! Automatically generated a
new random set with 450 free from 9265 observed reflections. You should save
your data to a new MTZ file and use this for any future rebuilding/refinement.  
notes | Fetching compressed mmCIF 1a0m from
http://files.rcsb.org/download/1a0m.cif  
Fetching compressed 1a0m structure factors from
http://files.rcsb.org/download/1a0m-sf.cif  
Resolution: 1.0944213038232693  
  
1a0m title:  
1.1 angstrom crystal structure of A-conotoxin [TYR15]-epi [more info...]  
  
Chain information for 1a0m  
---  
Chain | Description  
1.3/A 1.3/B | α-conotoxin [TYR15]-epi  
  
Non-standard residues in 1a0m #1.3  
---  
NH2 — amino group  
  
  

> hide #!1.2 models

> show #!1.2 models

> hide #!1.2 models

Traceback (most recent call last):  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/mouse_modes/mousemodes.py", line 457, in _wheel_event  
f.wheel(MouseEvent(event))  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/mouse_modes/std_modes.py", line 389, in wheel  
self.zoom(100*d*psize, stereo_scaling = not event.alt_down())  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 168, in zoom  
self.far_clip.plane_point = new_origin + distance*(1+self.far_clip_multiplier)  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 113, in far_clip  
from chimerax.core.graphics.clipping import CameraClipPlane  
ModuleNotFoundError: No module named 'chimerax.core.graphics.clipping'  
  
ModuleNotFoundError: No module named 'chimerax.core.graphics.clipping'  
  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 113, in far_clip  
from chimerax.core.graphics.clipping import CameraClipPlane  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/mouse_modes/mousemodes.py", line 457, in _wheel_event  
f.wheel(MouseEvent(event))  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/mouse_modes/std_modes.py", line 389, in wheel  
self.zoom(100*d*psize, stereo_scaling = not event.alt_down())  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 168, in zoom  
self.far_clip.plane_point = new_origin + distance*(1+self.far_clip_multiplier)  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 113, in far_clip  
from chimerax.core.graphics.clipping import CameraClipPlane  
ModuleNotFoundError: No module named 'chimerax.core.graphics.clipping'  
  
ModuleNotFoundError: No module named 'chimerax.core.graphics.clipping'  
  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 113, in far_clip  
from chimerax.core.graphics.clipping import CameraClipPlane  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/mouse_modes/mousemodes.py", line 457, in _wheel_event  
f.wheel(MouseEvent(event))  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/mouse_modes/std_modes.py", line 389, in wheel  
self.zoom(100*d*psize, stereo_scaling = not event.alt_down())  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 168, in zoom  
self.far_clip.plane_point = new_origin + distance*(1+self.far_clip_multiplier)  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 113, in far_clip  
from chimerax.core.graphics.clipping import CameraClipPlane  
ModuleNotFoundError: No module named 'chimerax.core.graphics.clipping'  
  
ModuleNotFoundError: No module named 'chimerax.core.graphics.clipping'  
  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 113, in far_clip  
from chimerax.core.graphics.clipping import CameraClipPlane  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/mouse_modes/mousemodes.py", line 457, in _wheel_event  
f.wheel(MouseEvent(event))  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/mouse_modes/std_modes.py", line 389, in wheel  
self.zoom(100*d*psize, stereo_scaling = not event.alt_down())  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 168, in zoom  
self.far_clip.plane_point = new_origin + distance*(1+self.far_clip_multiplier)  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 113, in far_clip  
from chimerax.core.graphics.clipping import CameraClipPlane  
ModuleNotFoundError: No module named 'chimerax.core.graphics.clipping'  
  
ModuleNotFoundError: No module named 'chimerax.core.graphics.clipping'  
  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 113, in far_clip  
from chimerax.core.graphics.clipping import CameraClipPlane  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/mouse_modes/mousemodes.py", line 457, in _wheel_event  
f.wheel(MouseEvent(event))  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/mouse_modes/std_modes.py", line 389, in wheel  
self.zoom(100*d*psize, stereo_scaling = not event.alt_down())  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 168, in zoom  
self.far_clip.plane_point = new_origin + distance*(1+self.far_clip_multiplier)  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 113, in far_clip  
from chimerax.core.graphics.clipping import CameraClipPlane  
ModuleNotFoundError: No module named 'chimerax.core.graphics.clipping'  
  
ModuleNotFoundError: No module named 'chimerax.core.graphics.clipping'  
  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 113, in far_clip  
from chimerax.core.graphics.clipping import CameraClipPlane  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/mouse_modes/mousemodes.py", line 457, in _wheel_event  
f.wheel(MouseEvent(event))  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/mouse_modes/std_modes.py", line 389, in wheel  
self.zoom(100*d*psize, stereo_scaling = not event.alt_down())  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 168, in zoom  
self.far_clip.plane_point = new_origin + distance*(1+self.far_clip_multiplier)  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 113, in far_clip  
from chimerax.core.graphics.clipping import CameraClipPlane  
ModuleNotFoundError: No module named 'chimerax.core.graphics.clipping'  
  
ModuleNotFoundError: No module named 'chimerax.core.graphics.clipping'  
  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 113, in far_clip  
from chimerax.core.graphics.clipping import CameraClipPlane  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/mouse_modes/mousemodes.py", line 457, in _wheel_event  
f.wheel(MouseEvent(event))  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/mouse_modes/std_modes.py", line 389, in wheel  
self.zoom(100*d*psize, stereo_scaling = not event.alt_down())  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 168, in zoom  
self.far_clip.plane_point = new_origin + distance*(1+self.far_clip_multiplier)  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 113, in far_clip  
from chimerax.core.graphics.clipping import CameraClipPlane  
ModuleNotFoundError: No module named 'chimerax.core.graphics.clipping'  
  
ModuleNotFoundError: No module named 'chimerax.core.graphics.clipping'  
  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 113, in far_clip  
from chimerax.core.graphics.clipping import CameraClipPlane  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/mouse_modes/mousemodes.py", line 457, in _wheel_event  
f.wheel(MouseEvent(event))  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/mouse_modes/std_modes.py", line 389, in wheel  
self.zoom(100*d*psize, stereo_scaling = not event.alt_down())  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 168, in zoom  
self.far_clip.plane_point = new_origin + distance*(1+self.far_clip_multiplier)  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 113, in far_clip  
from chimerax.core.graphics.clipping import CameraClipPlane  
ModuleNotFoundError: No module named 'chimerax.core.graphics.clipping'  
  
ModuleNotFoundError: No module named 'chimerax.core.graphics.clipping'  
  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 113, in far_clip  
from chimerax.core.graphics.clipping import CameraClipPlane  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/mouse_modes/mousemodes.py", line 457, in _wheel_event  
f.wheel(MouseEvent(event))  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/mouse_modes/std_modes.py", line 389, in wheel  
self.zoom(100*d*psize, stereo_scaling = not event.alt_down())  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 168, in zoom  
self.far_clip.plane_point = new_origin + distance*(1+self.far_clip_multiplier)  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 113, in far_clip  
from chimerax.core.graphics.clipping import CameraClipPlane  
ModuleNotFoundError: No module named 'chimerax.core.graphics.clipping'  
  
ModuleNotFoundError: No module named 'chimerax.core.graphics.clipping'  
  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 113, in far_clip  
from chimerax.core.graphics.clipping import CameraClipPlane  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/mouse_modes/mousemodes.py", line 457, in _wheel_event  
f.wheel(MouseEvent(event))  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/mouse_modes/std_modes.py", line 389, in wheel  
self.zoom(100*d*psize, stereo_scaling = not event.alt_down())  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 168, in zoom  
self.far_clip.plane_point = new_origin + distance*(1+self.far_clip_multiplier)  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 113, in far_clip  
from chimerax.core.graphics.clipping import CameraClipPlane  
ModuleNotFoundError: No module named 'chimerax.core.graphics.clipping'  
  
ModuleNotFoundError: No module named 'chimerax.core.graphics.clipping'  
  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 113, in far_clip  
from chimerax.core.graphics.clipping import CameraClipPlane  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/mouse_modes/mousemodes.py", line 457, in _wheel_event  
f.wheel(MouseEvent(event))  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/mouse_modes/std_modes.py", line 389, in wheel  
self.zoom(100*d*psize, stereo_scaling = not event.alt_down())  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 168, in zoom  
self.far_clip.plane_point = new_origin + distance*(1+self.far_clip_multiplier)  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 113, in far_clip  
from chimerax.core.graphics.clipping import CameraClipPlane  
ModuleNotFoundError: No module named 'chimerax.core.graphics.clipping'  
  
ModuleNotFoundError: No module named 'chimerax.core.graphics.clipping'  
  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 113, in far_clip  
from chimerax.core.graphics.clipping import CameraClipPlane  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/mouse_modes/mousemodes.py", line 457, in _wheel_event  
f.wheel(MouseEvent(event))  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/mouse_modes/std_modes.py", line 389, in wheel  
self.zoom(100*d*psize, stereo_scaling = not event.alt_down())  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 168, in zoom  
self.far_clip.plane_point = new_origin + distance*(1+self.far_clip_multiplier)  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 113, in far_clip  
from chimerax.core.graphics.clipping import CameraClipPlane  
ModuleNotFoundError: No module named 'chimerax.core.graphics.clipping'  
  
ModuleNotFoundError: No module named 'chimerax.core.graphics.clipping'  
  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 113, in far_clip  
from chimerax.core.graphics.clipping import CameraClipPlane  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/mouse_modes/mousemodes.py", line 457, in _wheel_event  
f.wheel(MouseEvent(event))  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/mouse_modes/std_modes.py", line 389, in wheel  
self.zoom(100*d*psize, stereo_scaling = not event.alt_down())  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 168, in zoom  
self.far_clip.plane_point = new_origin + distance*(1+self.far_clip_multiplier)  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 113, in far_clip  
from chimerax.core.graphics.clipping import CameraClipPlane  
ModuleNotFoundError: No module named 'chimerax.core.graphics.clipping'  
  
ModuleNotFoundError: No module named 'chimerax.core.graphics.clipping'  
  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 113, in far_clip  
from chimerax.core.graphics.clipping import CameraClipPlane  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/mouse_modes/mousemodes.py", line 457, in _wheel_event  
f.wheel(MouseEvent(event))  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/mouse_modes/std_modes.py", line 389, in wheel  
self.zoom(100*d*psize, stereo_scaling = not event.alt_down())  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 168, in zoom  
self.far_clip.plane_point = new_origin + distance*(1+self.far_clip_multiplier)  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 113, in far_clip  
from chimerax.core.graphics.clipping import CameraClipPlane  
ModuleNotFoundError: No module named 'chimerax.core.graphics.clipping'  
  
ModuleNotFoundError: No module named 'chimerax.core.graphics.clipping'  
  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 113, in far_clip  
from chimerax.core.graphics.clipping import CameraClipPlane  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/mouse_modes/mousemodes.py", line 457, in _wheel_event  
f.wheel(MouseEvent(event))  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/mouse_modes/std_modes.py", line 389, in wheel  
self.zoom(100*d*psize, stereo_scaling = not event.alt_down())  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 168, in zoom  
self.far_clip.plane_point = new_origin + distance*(1+self.far_clip_multiplier)  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 113, in far_clip  
from chimerax.core.graphics.clipping import CameraClipPlane  
ModuleNotFoundError: No module named 'chimerax.core.graphics.clipping'  
  
ModuleNotFoundError: No module named 'chimerax.core.graphics.clipping'  
  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 113, in far_clip  
from chimerax.core.graphics.clipping import CameraClipPlane  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/mouse_modes/mousemodes.py", line 457, in _wheel_event  
f.wheel(MouseEvent(event))  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/mouse_modes/std_modes.py", line 389, in wheel  
self.zoom(100*d*psize, stereo_scaling = not event.alt_down())  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 168, in zoom  
self.far_clip.plane_point = new_origin + distance*(1+self.far_clip_multiplier)  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 113, in far_clip  
from chimerax.core.graphics.clipping import CameraClipPlane  
ModuleNotFoundError: No module named 'chimerax.core.graphics.clipping'  
  
ModuleNotFoundError: No module named 'chimerax.core.graphics.clipping'  
  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 113, in far_clip  
from chimerax.core.graphics.clipping import CameraClipPlane  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/mouse_modes/mousemodes.py", line 457, in _wheel_event  
f.wheel(MouseEvent(event))  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/mouse_modes/std_modes.py", line 389, in wheel  
self.zoom(100*d*psize, stereo_scaling = not event.alt_down())  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 168, in zoom  
self.far_clip.plane_point = new_origin + distance*(1+self.far_clip_multiplier)  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 113, in far_clip  
from chimerax.core.graphics.clipping import CameraClipPlane  
ModuleNotFoundError: No module named 'chimerax.core.graphics.clipping'  
  
ModuleNotFoundError: No module named 'chimerax.core.graphics.clipping'  
  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 113, in far_clip  
from chimerax.core.graphics.clipping import CameraClipPlane  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/mouse_modes/mousemodes.py", line 457, in _wheel_event  
f.wheel(MouseEvent(event))  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/mouse_modes/std_modes.py", line 389, in wheel  
self.zoom(100*d*psize, stereo_scaling = not event.alt_down())  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 168, in zoom  
self.far_clip.plane_point = new_origin + distance*(1+self.far_clip_multiplier)  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 113, in far_clip  
from chimerax.core.graphics.clipping import CameraClipPlane  
ModuleNotFoundError: No module named 'chimerax.core.graphics.clipping'  
  
ModuleNotFoundError: No module named 'chimerax.core.graphics.clipping'  
  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 113, in far_clip  
from chimerax.core.graphics.clipping import CameraClipPlane  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/mouse_modes/mousemodes.py", line 457, in _wheel_event  
f.wheel(MouseEvent(event))  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/mouse_modes/std_modes.py", line 389, in wheel  
self.zoom(100*d*psize, stereo_scaling = not event.alt_down())  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 168, in zoom  
self.far_clip.plane_point = new_origin + distance*(1+self.far_clip_multiplier)  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 113, in far_clip  
from chimerax.core.graphics.clipping import CameraClipPlane  
ModuleNotFoundError: No module named 'chimerax.core.graphics.clipping'  
  
ModuleNotFoundError: No module named 'chimerax.core.graphics.clipping'  
  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 113, in far_clip  
from chimerax.core.graphics.clipping import CameraClipPlane  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/mouse_modes/mousemodes.py", line 457, in _wheel_event  
f.wheel(MouseEvent(event))  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/mouse_modes/std_modes.py", line 389, in wheel  
self.zoom(100*d*psize, stereo_scaling = not event.alt_down())  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 168, in zoom  
self.far_clip.plane_point = new_origin + distance*(1+self.far_clip_multiplier)  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 113, in far_clip  
from chimerax.core.graphics.clipping import CameraClipPlane  
ModuleNotFoundError: No module named 'chimerax.core.graphics.clipping'  
  
ModuleNotFoundError: No module named 'chimerax.core.graphics.clipping'  
  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 113, in far_clip  
from chimerax.core.graphics.clipping import CameraClipPlane  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/mouse_modes/mousemodes.py", line 457, in _wheel_event  
f.wheel(MouseEvent(event))  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/mouse_modes/std_modes.py", line 389, in wheel  
self.zoom(100*d*psize, stereo_scaling = not event.alt_down())  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 168, in zoom  
self.far_clip.plane_point = new_origin + distance*(1+self.far_clip_multiplier)  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 113, in far_clip  
from chimerax.core.graphics.clipping import CameraClipPlane  
ModuleNotFoundError: No module named 'chimerax.core.graphics.clipping'  
  
ModuleNotFoundError: No module named 'chimerax.core.graphics.clipping'  
  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 113, in far_clip  
from chimerax.core.graphics.clipping import CameraClipPlane  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/mouse_modes/mousemodes.py", line 457, in _wheel_event  
f.wheel(MouseEvent(event))  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/mouse_modes/std_modes.py", line 389, in wheel  
self.zoom(100*d*psize, stereo_scaling = not event.alt_down())  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 168, in zoom  
self.far_clip.plane_point = new_origin + distance*(1+self.far_clip_multiplier)  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 113, in far_clip  
from chimerax.core.graphics.clipping import CameraClipPlane  
ModuleNotFoundError: No module named 'chimerax.core.graphics.clipping'  
  
ModuleNotFoundError: No module named 'chimerax.core.graphics.clipping'  
  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 113, in far_clip  
from chimerax.core.graphics.clipping import CameraClipPlane  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/mouse_modes/mousemodes.py", line 457, in _wheel_event  
f.wheel(MouseEvent(event))  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/mouse_modes/std_modes.py", line 389, in wheel  
self.zoom(100*d*psize, stereo_scaling = not event.alt_down())  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 168, in zoom  
self.far_clip.plane_point = new_origin + distance*(1+self.far_clip_multiplier)  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 113, in far_clip  
from chimerax.core.graphics.clipping import CameraClipPlane  
ModuleNotFoundError: No module named 'chimerax.core.graphics.clipping'  
  
ModuleNotFoundError: No module named 'chimerax.core.graphics.clipping'  
  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 113, in far_clip  
from chimerax.core.graphics.clipping import CameraClipPlane  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/mouse_modes/mousemodes.py", line 457, in _wheel_event  
f.wheel(MouseEvent(event))  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/mouse_modes/std_modes.py", line 389, in wheel  
self.zoom(100*d*psize, stereo_scaling = not event.alt_down())  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 168, in zoom  
self.far_clip.plane_point = new_origin + distance*(1+self.far_clip_multiplier)  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 113, in far_clip  
from chimerax.core.graphics.clipping import CameraClipPlane  
ModuleNotFoundError: No module named 'chimerax.core.graphics.clipping'  
  
ModuleNotFoundError: No module named 'chimerax.core.graphics.clipping'  
  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 113, in far_clip  
from chimerax.core.graphics.clipping import CameraClipPlane  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/mouse_modes/mousemodes.py", line 457, in _wheel_event  
f.wheel(MouseEvent(event))  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/mouse_modes/std_modes.py", line 389, in wheel  
self.zoom(100*d*psize, stereo_scaling = not event.alt_down())  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 168, in zoom  
self.far_clip.plane_point = new_origin + distance*(1+self.far_clip_multiplier)  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 113, in far_clip  
from chimerax.core.graphics.clipping import CameraClipPlane  
ModuleNotFoundError: No module named 'chimerax.core.graphics.clipping'  
  
ModuleNotFoundError: No module named 'chimerax.core.graphics.clipping'  
  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 113, in far_clip  
from chimerax.core.graphics.clipping import CameraClipPlane  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/mouse_modes/mousemodes.py", line 457, in _wheel_event  
f.wheel(MouseEvent(event))  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/mouse_modes/std_modes.py", line 389, in wheel  
self.zoom(100*d*psize, stereo_scaling = not event.alt_down())  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 168, in zoom  
self.far_clip.plane_point = new_origin + distance*(1+self.far_clip_multiplier)  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 113, in far_clip  
from chimerax.core.graphics.clipping import CameraClipPlane  
ModuleNotFoundError: No module named 'chimerax.core.graphics.clipping'  
  
ModuleNotFoundError: No module named 'chimerax.core.graphics.clipping'  
  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 113, in far_clip  
from chimerax.core.graphics.clipping import CameraClipPlane  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/mouse_modes/mousemodes.py", line 457, in _wheel_event  
f.wheel(MouseEvent(event))  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/mouse_modes/std_modes.py", line 389, in wheel  
self.zoom(100*d*psize, stereo_scaling = not event.alt_down())  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 168, in zoom  
self.far_clip.plane_point = new_origin + distance*(1+self.far_clip_multiplier)  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 113, in far_clip  
from chimerax.core.graphics.clipping import CameraClipPlane  
ModuleNotFoundError: No module named 'chimerax.core.graphics.clipping'  
  
ModuleNotFoundError: No module named 'chimerax.core.graphics.clipping'  
  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 113, in far_clip  
from chimerax.core.graphics.clipping import CameraClipPlane  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/mouse_modes/mousemodes.py", line 457, in _wheel_event  
f.wheel(MouseEvent(event))  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/mouse_modes/std_modes.py", line 389, in wheel  
self.zoom(100*d*psize, stereo_scaling = not event.alt_down())  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 168, in zoom  
self.far_clip.plane_point = new_origin + distance*(1+self.far_clip_multiplier)  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 113, in far_clip  
from chimerax.core.graphics.clipping import CameraClipPlane  
ModuleNotFoundError: No module named 'chimerax.core.graphics.clipping'  
  
ModuleNotFoundError: No module named 'chimerax.core.graphics.clipping'  
  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 113, in far_clip  
from chimerax.core.graphics.clipping import CameraClipPlane  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/mouse_modes/mousemodes.py", line 457, in _wheel_event  
f.wheel(MouseEvent(event))  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/mouse_modes/std_modes.py", line 389, in wheel  
self.zoom(100*d*psize, stereo_scaling = not event.alt_down())  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 168, in zoom  
self.far_clip.plane_point = new_origin + distance*(1+self.far_clip_multiplier)  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 113, in far_clip  
from chimerax.core.graphics.clipping import CameraClipPlane  
ModuleNotFoundError: No module named 'chimerax.core.graphics.clipping'  
  
ModuleNotFoundError: No module named 'chimerax.core.graphics.clipping'  
  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 113, in far_clip  
from chimerax.core.graphics.clipping import CameraClipPlane  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/mouse_modes/mousemodes.py", line 457, in _wheel_event  
f.wheel(MouseEvent(event))  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/mouse_modes/std_modes.py", line 389, in wheel  
self.zoom(100*d*psize, stereo_scaling = not event.alt_down())  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 168, in zoom  
self.far_clip.plane_point = new_origin + distance*(1+self.far_clip_multiplier)  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 113, in far_clip  
from chimerax.core.graphics.clipping import CameraClipPlane  
ModuleNotFoundError: No module named 'chimerax.core.graphics.clipping'  
  
ModuleNotFoundError: No module named 'chimerax.core.graphics.clipping'  
  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 113, in far_clip  
from chimerax.core.graphics.clipping import CameraClipPlane  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/mouse_modes/mousemodes.py", line 457, in _wheel_event  
f.wheel(MouseEvent(event))  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/mouse_modes/std_modes.py", line 389, in wheel  
self.zoom(100*d*psize, stereo_scaling = not event.alt_down())  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 168, in zoom  
self.far_clip.plane_point = new_origin + distance*(1+self.far_clip_multiplier)  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 113, in far_clip  
from chimerax.core.graphics.clipping import CameraClipPlane  
ModuleNotFoundError: No module named 'chimerax.core.graphics.clipping'  
  
ModuleNotFoundError: No module named 'chimerax.core.graphics.clipping'  
  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 113, in far_clip  
from chimerax.core.graphics.clipping import CameraClipPlane  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/mouse_modes/mousemodes.py", line 457, in _wheel_event  
f.wheel(MouseEvent(event))  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/mouse_modes/std_modes.py", line 389, in wheel  
self.zoom(100*d*psize, stereo_scaling = not event.alt_down())  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 168, in zoom  
self.far_clip.plane_point = new_origin + distance*(1+self.far_clip_multiplier)  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 113, in far_clip  
from chimerax.core.graphics.clipping import CameraClipPlane  
ModuleNotFoundError: No module named 'chimerax.core.graphics.clipping'  
  
ModuleNotFoundError: No module named 'chimerax.core.graphics.clipping'  
  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 113, in far_clip  
from chimerax.core.graphics.clipping import CameraClipPlane  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/mouse_modes/mousemodes.py", line 457, in _wheel_event  
f.wheel(MouseEvent(event))  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/mouse_modes/std_modes.py", line 389, in wheel  
self.zoom(100*d*psize, stereo_scaling = not event.alt_down())  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 168, in zoom  
self.far_clip.plane_point = new_origin + distance*(1+self.far_clip_multiplier)  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 113, in far_clip  
from chimerax.core.graphics.clipping import CameraClipPlane  
ModuleNotFoundError: No module named 'chimerax.core.graphics.clipping'  
  
ModuleNotFoundError: No module named 'chimerax.core.graphics.clipping'  
  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 113, in far_clip  
from chimerax.core.graphics.clipping import CameraClipPlane  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/mouse_modes/mousemodes.py", line 457, in _wheel_event  
f.wheel(MouseEvent(event))  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/mouse_modes/std_modes.py", line 389, in wheel  
self.zoom(100*d*psize, stereo_scaling = not event.alt_down())  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 168, in zoom  
self.far_clip.plane_point = new_origin + distance*(1+self.far_clip_multiplier)  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 113, in far_clip  
from chimerax.core.graphics.clipping import CameraClipPlane  
ModuleNotFoundError: No module named 'chimerax.core.graphics.clipping'  
  
ModuleNotFoundError: No module named 'chimerax.core.graphics.clipping'  
  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 113, in far_clip  
from chimerax.core.graphics.clipping import CameraClipPlane  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/mouse_modes/mousemodes.py", line 457, in _wheel_event  
f.wheel(MouseEvent(event))  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/mouse_modes/std_modes.py", line 389, in wheel  
self.zoom(100*d*psize, stereo_scaling = not event.alt_down())  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 168, in zoom  
self.far_clip.plane_point = new_origin + distance*(1+self.far_clip_multiplier)  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 113, in far_clip  
from chimerax.core.graphics.clipping import CameraClipPlane  
ModuleNotFoundError: No module named 'chimerax.core.graphics.clipping'  
  
ModuleNotFoundError: No module named 'chimerax.core.graphics.clipping'  
  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 113, in far_clip  
from chimerax.core.graphics.clipping import CameraClipPlane  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/mouse_modes/mousemodes.py", line 457, in _wheel_event  
f.wheel(MouseEvent(event))  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/mouse_modes/std_modes.py", line 389, in wheel  
self.zoom(100*d*psize, stereo_scaling = not event.alt_down())  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 168, in zoom  
self.far_clip.plane_point = new_origin + distance*(1+self.far_clip_multiplier)  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 113, in far_clip  
from chimerax.core.graphics.clipping import CameraClipPlane  
ModuleNotFoundError: No module named 'chimerax.core.graphics.clipping'  
  
ModuleNotFoundError: No module named 'chimerax.core.graphics.clipping'  
  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 113, in far_clip  
from chimerax.core.graphics.clipping import CameraClipPlane  
  
See log for complete Python traceback.  
  

> hide #!1.3.1 models

> show #!1.3.1 models

> hide #!1.3.2 models

> show #!1.3.2 models

> hide #!1.3.3 models

> show #!1.3.3 models

> hide #!1.3.3 models

> show #!1.3.3 models

> hide #!1.3.2 models

> show #!1.3.2 models

> hide #!1.3.2 models

> show #!1.3.2 models

> hide #!1.3.1 models

> show #!1.3.1 models

Traceback (most recent call last):  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/mouse_modes/mousemodes.py", line 457, in _wheel_event  
f.wheel(MouseEvent(event))  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 65, in wheel  
z.far_clip_multiplier *= mult  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 88, in far_clip_multiplier  
self.zoom(0)  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 168, in zoom  
self.far_clip.plane_point = new_origin + distance*(1+self.far_clip_multiplier)  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 113, in far_clip  
from chimerax.core.graphics.clipping import CameraClipPlane  
ModuleNotFoundError: No module named 'chimerax.core.graphics.clipping'  
  
ModuleNotFoundError: No module named 'chimerax.core.graphics.clipping'  
  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 113, in far_clip  
from chimerax.core.graphics.clipping import CameraClipPlane  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/mouse_modes/mousemodes.py", line 457, in _wheel_event  
f.wheel(MouseEvent(event))  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 65, in wheel  
z.far_clip_multiplier *= mult  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 88, in far_clip_multiplier  
self.zoom(0)  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 168, in zoom  
self.far_clip.plane_point = new_origin + distance*(1+self.far_clip_multiplier)  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 113, in far_clip  
from chimerax.core.graphics.clipping import CameraClipPlane  
ModuleNotFoundError: No module named 'chimerax.core.graphics.clipping'  
  
ModuleNotFoundError: No module named 'chimerax.core.graphics.clipping'  
  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 113, in far_clip  
from chimerax.core.graphics.clipping import CameraClipPlane  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/mouse_modes/mousemodes.py", line 457, in _wheel_event  
f.wheel(MouseEvent(event))  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 65, in wheel  
z.far_clip_multiplier *= mult  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 88, in far_clip_multiplier  
self.zoom(0)  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 168, in zoom  
self.far_clip.plane_point = new_origin + distance*(1+self.far_clip_multiplier)  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 113, in far_clip  
from chimerax.core.graphics.clipping import CameraClipPlane  
ModuleNotFoundError: No module named 'chimerax.core.graphics.clipping'  
  
ModuleNotFoundError: No module named 'chimerax.core.graphics.clipping'  
  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 113, in far_clip  
from chimerax.core.graphics.clipping import CameraClipPlane  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/mouse_modes/mousemodes.py", line 457, in _wheel_event  
f.wheel(MouseEvent(event))  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 65, in wheel  
z.far_clip_multiplier *= mult  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 88, in far_clip_multiplier  
self.zoom(0)  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 168, in zoom  
self.far_clip.plane_point = new_origin + distance*(1+self.far_clip_multiplier)  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 113, in far_clip  
from chimerax.core.graphics.clipping import CameraClipPlane  
ModuleNotFoundError: No module named 'chimerax.core.graphics.clipping'  
  
ModuleNotFoundError: No module named 'chimerax.core.graphics.clipping'  
  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 113, in far_clip  
from chimerax.core.graphics.clipping import CameraClipPlane  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/mouse_modes/mousemodes.py", line 457, in _wheel_event  
f.wheel(MouseEvent(event))  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/mouse_modes/std_modes.py", line 389, in wheel  
self.zoom(100*d*psize, stereo_scaling = not event.alt_down())  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 168, in zoom  
self.far_clip.plane_point = new_origin + distance*(1+self.far_clip_multiplier)  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 113, in far_clip  
from chimerax.core.graphics.clipping import CameraClipPlane  
ModuleNotFoundError: No module named 'chimerax.core.graphics.clipping'  
  
ModuleNotFoundError: No module named 'chimerax.core.graphics.clipping'  
  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 113, in far_clip  
from chimerax.core.graphics.clipping import CameraClipPlane  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/mouse_modes/mousemodes.py", line 457, in _wheel_event  
f.wheel(MouseEvent(event))  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/mouse_modes/std_modes.py", line 389, in wheel  
self.zoom(100*d*psize, stereo_scaling = not event.alt_down())  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 168, in zoom  
self.far_clip.plane_point = new_origin + distance*(1+self.far_clip_multiplier)  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 113, in far_clip  
from chimerax.core.graphics.clipping import CameraClipPlane  
ModuleNotFoundError: No module named 'chimerax.core.graphics.clipping'  
  
ModuleNotFoundError: No module named 'chimerax.core.graphics.clipping'  
  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 113, in far_clip  
from chimerax.core.graphics.clipping import CameraClipPlane  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/mouse_modes/mousemodes.py", line 457, in _wheel_event  
f.wheel(MouseEvent(event))  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/mouse_modes/std_modes.py", line 389, in wheel  
self.zoom(100*d*psize, stereo_scaling = not event.alt_down())  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 168, in zoom  
self.far_clip.plane_point = new_origin + distance*(1+self.far_clip_multiplier)  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 113, in far_clip  
from chimerax.core.graphics.clipping import CameraClipPlane  
ModuleNotFoundError: No module named 'chimerax.core.graphics.clipping'  
  
ModuleNotFoundError: No module named 'chimerax.core.graphics.clipping'  
  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 113, in far_clip  
from chimerax.core.graphics.clipping import CameraClipPlane  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/mouse_modes/mousemodes.py", line 457, in _wheel_event  
f.wheel(MouseEvent(event))  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/mouse_modes/std_modes.py", line 389, in wheel  
self.zoom(100*d*psize, stereo_scaling = not event.alt_down())  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 168, in zoom  
self.far_clip.plane_point = new_origin + distance*(1+self.far_clip_multiplier)  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 113, in far_clip  
from chimerax.core.graphics.clipping import CameraClipPlane  
ModuleNotFoundError: No module named 'chimerax.core.graphics.clipping'  
  
ModuleNotFoundError: No module named 'chimerax.core.graphics.clipping'  
  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 113, in far_clip  
from chimerax.core.graphics.clipping import CameraClipPlane  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/mouse_modes/mousemodes.py", line 457, in _wheel_event  
f.wheel(MouseEvent(event))  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/mouse_modes/std_modes.py", line 389, in wheel  
self.zoom(100*d*psize, stereo_scaling = not event.alt_down())  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 168, in zoom  
self.far_clip.plane_point = new_origin + distance*(1+self.far_clip_multiplier)  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 113, in far_clip  
from chimerax.core.graphics.clipping import CameraClipPlane  
ModuleNotFoundError: No module named 'chimerax.core.graphics.clipping'  
  
ModuleNotFoundError: No module named 'chimerax.core.graphics.clipping'  
  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 113, in far_clip  
from chimerax.core.graphics.clipping import CameraClipPlane  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/mouse_modes/mousemodes.py", line 457, in _wheel_event  
f.wheel(MouseEvent(event))  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/mouse_modes/std_modes.py", line 389, in wheel  
self.zoom(100*d*psize, stereo_scaling = not event.alt_down())  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 168, in zoom  
self.far_clip.plane_point = new_origin + distance*(1+self.far_clip_multiplier)  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 113, in far_clip  
from chimerax.core.graphics.clipping import CameraClipPlane  
ModuleNotFoundError: No module named 'chimerax.core.graphics.clipping'  
  
ModuleNotFoundError: No module named 'chimerax.core.graphics.clipping'  
  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 113, in far_clip  
from chimerax.core.graphics.clipping import CameraClipPlane  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/mouse_modes/mousemodes.py", line 457, in _wheel_event  
f.wheel(MouseEvent(event))  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/mouse_modes/std_modes.py", line 389, in wheel  
self.zoom(100*d*psize, stereo_scaling = not event.alt_down())  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 168, in zoom  
self.far_clip.plane_point = new_origin + distance*(1+self.far_clip_multiplier)  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 113, in far_clip  
from chimerax.core.graphics.clipping import CameraClipPlane  
ModuleNotFoundError: No module named 'chimerax.core.graphics.clipping'  
  
ModuleNotFoundError: No module named 'chimerax.core.graphics.clipping'  
  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 113, in far_clip  
from chimerax.core.graphics.clipping import CameraClipPlane  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/mouse_modes/mousemodes.py", line 457, in _wheel_event  
f.wheel(MouseEvent(event))  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/mouse_modes/std_modes.py", line 389, in wheel  
self.zoom(100*d*psize, stereo_scaling = not event.alt_down())  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 168, in zoom  
self.far_clip.plane_point = new_origin + distance*(1+self.far_clip_multiplier)  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 113, in far_clip  
from chimerax.core.graphics.clipping import CameraClipPlane  
ModuleNotFoundError: No module named 'chimerax.core.graphics.clipping'  
  
ModuleNotFoundError: No module named 'chimerax.core.graphics.clipping'  
  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 113, in far_clip  
from chimerax.core.graphics.clipping import CameraClipPlane  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/mouse_modes/mousemodes.py", line 457, in _wheel_event  
f.wheel(MouseEvent(event))  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/mouse_modes/std_modes.py", line 389, in wheel  
self.zoom(100*d*psize, stereo_scaling = not event.alt_down())  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 168, in zoom  
self.far_clip.plane_point = new_origin + distance*(1+self.far_clip_multiplier)  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 113, in far_clip  
from chimerax.core.graphics.clipping import CameraClipPlane  
ModuleNotFoundError: No module named 'chimerax.core.graphics.clipping'  
  
ModuleNotFoundError: No module named 'chimerax.core.graphics.clipping'  
  
File "/usr/local/chimerax-0.9/lib/python3.7/site-
packages/chimerax/clipper/mousemodes.py", line 113, in far_clip  
from chimerax.core.graphics.clipping import CameraClipPlane  
  
See log for complete Python traceback.  
  




OpenGL version: 3.3.0 NVIDIA 430.26
OpenGL renderer: GeForce GTX 1080 Ti/PCIe/SSE2
OpenGL vendor: NVIDIA Corporation

Change History (5)

comment:1 by Tristan Croll, 6 years ago

Platform: → all
Project: → ChimeraX
Resolution: → duplicate
Status: new → closed

Duplicate of #2214.

comment:2 by pett, 6 years ago

Component: Unassigned → Tool Shed
Resolution: duplicate
Status: closed → reopened

comment:3 by pett, 6 years ago

Owner: set to Conrad Huang
Status: reopened → assigned

comment:4 by pett, 6 years ago

Resolution: → duplicate
Status: assigned → closed

comment:5 by pett, 6 years ago

Summary: ChimeraX bug report submission → Incorrect version of Clipper installed in ChimeraX 0.9
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