Opened 6 years ago

Closed 6 years ago

Last modified 6 years ago

#2129 closed defect (not a bug)

Surface caps not working

Reported by: yazan.abbas@… Owned by: Tom Goddard
Priority: normal Milestone:
Component: Surface Version:
Keywords: Cc:
Blocked By: Blocking:
Notify when closed: Platform: all
Project: ChimeraX

Description 

The following bug report has been submitted:
Platform:        Linux-4.15.0-51-generic-x86_64-with-debian-stretch-sid
ChimeraX Version: 0.91 (2019-06-25)
Description
Surface cap still doesn't work (new session, recently loaded volume, no other operations). I also tried the production release of chimerax and it doesnt work there either.

Log:
UCSF ChimeraX version: 0.91 (2019-06-25)  
© 2016-2019 Regents of the University of California. All rights reserved.  
How to cite UCSF ChimeraX  

> open /home/yazan/Dropbox/Abbas_etal_2019_brainV-
ATPase/Figures/Figure3/maps_and_models/J1509_state1_Vo.mrc

Opened J1509_state1_Vo.mrc, grid size 340,340,340, pixel 1.06, shown at level
0.16, step 2, values float32  

> surface cap

Clip caps off, offset 0.01  




OpenGL version: 3.3.0 NVIDIA 418.56
OpenGL renderer: GeForce RTX 2070/PCIe/SSE2
OpenGL vendor: NVIDIA Corporation

Change History (3)

comment:1 by Eric Pettersen, 6 years ago

Component: Unassigned → Surface
Owner: set to Tom Goddard
Platform: → all
Project: → ChimeraX
Status: new → assigned
Summary: ChimeraX bug report submission → Surface caps not working

comment:2 by Tom Goddard, 6 years ago

Resolution: → not a bug
Status: assigned → closed

As your "surface cap" command says, you have surface caps turned off. I guess you turned this off in ChimeraX Preferences under Clipping.

in reply to:  3 ; comment:3 by yazan.abbas@…, 6 years ago 

sorry that was a mistake on my part. I resubmitted the bug report with
surface cap on. Sometimes it works, sometimes it doesn't

On Thu, Jun 27, 2019 at 2:21 PM ChimeraX <ChimeraX-bugs-admin@cgl.ucsf.edu>
wrote:
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