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Opened 5 hours ago
Closed 2 hours ago
#20361 closed defect (duplicate)
Parsing BlastProtein results failed: HTTP Error 415: Unsupported Media Type
| Reported by: | Owned by: | Zach Pearson | |
|---|---|---|---|
| Priority: | normal | Milestone: | |
| Component: | Sequence | Version: | |
| Keywords: | Cc: | Eric Pettersen | |
| Blocked By: | Blocking: | ||
| Notify when closed: | Platform: | all | |
| Project: | ChimeraX |
Description
The following bug report has been submitted:
Platform: macOS-26.2-arm64-arm-64bit
ChimeraX Version: 1.11.1 (2026-01-23 05:51:34 UTC)
Description
Blast not working
Blast reports an error:
Parsing BlastProtein results failed: HTTP Error 415: Unsupported Media Type
Log:
Could not find tool "CliX"
> buttonpanel Shortcuts add previous_model command prevmodel
> buttonpanel Shortcuts add next_model command nextmodel
> alias analyse_af_screen_hit runscript
> /Users/matthias.vorlaender/Library/CloudStorage/OneDrive-
> VBC/ChimeraX/scripts/analyse_af2_screen_hit.cxc $1 $2
> alias analyse_af3 runscript
> /Users/matthias.vorlaender/Library/CloudStorage/OneDrive-
> VBC/ChimeraX/scripts/analyse_af3_prediction.cxc $1 $2
> alias des_ex runscript
> /Users/matthias.vorlaender/Library/CloudStorage/OneDrive-
> VBC/ChimeraX/scripts/select_by_exact_match.cxc $1
> alias des runscript
> /Users/matthias.vorlaender/Library/CloudStorage/OneDrive-
> VBC/ChimeraX/scripts/select_by_description_match.cxc $1
> alias des_m runscript
> /Users/matthias.vorlaender/Library/CloudStorage/OneDrive-
> VBC/ChimeraX/scripts/select_model_by_description_match.cxc $1 $2
> alias analyse_af3_model runscript
> /Users/matthias.vorlaender/Library/CloudStorage/OneDrive-
> VBC/ChimeraX/scripts/analyse_af3_prediction_1_model.cxc $1 $2 $3
> alias pol_pdbs cd /Users/matthias.vorlaender/Library/CloudStorage/OneDrive-
> VBC/nascent_PolII_onedrive/pol_II_pdbs
> alias analyse_auto-AF runscript
> /Users/matthias.vorlaender/Library/CloudStorage/OneDrive-
> VBC/ChimeraX/scripts/analyse_auto-alphafold_prediction.cxc $1 $2
> alias af_hit runscript
> /Users/matthias.vorlaender/Library/CloudStorage/OneDrive-
> VBC/ChimeraX/scripts/analyse_af2_screen_hit_rank1.cxc $1 $2
> alias map_missense runscript
> /Users/matthias.vorlaender/Library/CloudStorage/OneDrive-
> VBC/ChimeraX/scripts/af_missense_coloring.cxc $1 $2
> alias missense mutationscores define avg fromScore amiss setAttribute true
> combine mean
> runscript /Users/matthias.vorlaender/Library/CloudStorage/OneDrive-
> VBC/ChimeraX/chimerax-trimmings/chimerax_trimmings.py
> runscript /Users/matthias.vorlaender/Library/CloudStorage/OneDrive-
> VBC/ChimeraX/chimerax-trimmings/map_salami.py
> camera ortho
> cofr centerOfView
> mousemode alt rightMode "contour level"
> mousemode rightMode clip
> mousemode alt leftMode "translate selected models"
> mousemode shift leftMode "rotate selected models"
> alias cootmode_white set bgColor white; surface cap false; surface style
> solid; nucleotides #* atoms; lighting flat; graphics silhouettes false;
> style stick; ~rib; color ##num_residues orange; color byhet ; disp
> ##num_residues & ##display; ~disp @H*; style ions sphere; style solvent
> ball; size ballscale 0.2; size stickradius 0.07; transparency 85; cofr
> centerofview; clip near -10 far 10 position cofr; color ~##num_residues
> medium blue
> alias usage cootmode_white synopsis "Apply the white-background Coot-style
> display preset"
> alias cootmode set bgColor black; surface cap false; surface style solid;
> nucleotides #* atoms; lighting flat; graphics silhouettes false; style
> stick; ~rib; color ##num_residues gold; color byhet ; disp ##num_residues &
> ##display; ~disp @H*; style ions sphere; style solvent ball; size ballscale
> 0.2; size stickradius 0.07; transparency 70; cofr centerofview; clip near
> -10 far 10 position cofr; color ~##num_residues cornflower blue
> alias usage cootmode synopsis "Apply the dark-background Coot-style display
> preset"
> alias cootmode_mesh surface cap false; surface style mesh; lighting flat;
> nucleotides #* atoms; graphics silhouettes false; style stick; ~rib; color
> ##num_residues gold; color byhet ; disp ##num_residues & ##display; ~disp
> @H*; style solvent ball; style ions sphere; size ballscale 0.2; size
> stickradius 0.07; cofr centerofview; clip near -10 far 10 position cofr;
> color ~##num_residues #3d60ffff; transparency 50
> alias usage cootmode_mesh synopsis "Apply the mesh Coot-style display
> preset"
> alias centersel cofr sel; clip near 10 position cofr; clip far -10 position
> cofr; cofr centerOfView showpivot true; view sel
> alias usage centersel synopsis "Center the view on the selection and apply
> local clipping"
> functionkey F1 prevmodel
> functionkey F2 nextmodel
> functionkey F3 centersel
> functionkey F4 view all
> functionkey F5 togglemaps
> functionkey F6 togglemodels
> functionkey F7 cyclelighting
> functionkey F8 cyclemodeldisplay
> functionkey F9 prevmap
> functionkey F10 nextmap
> buttonpanel Shortcuts rows 3 columns 5
> buttonpanel Shortcuts add Vol_Viewer command "tool show 'Volume Viewer'"
> buttonpanel Shortcuts add Model_Panel command "tool show Models"
> buttonpanel Shortcuts add Log command "tool show Log"
> buttonpanel Shortcuts add togglemaps command togglemaps
> buttonpanel Shortcuts add togglemodels command togglemodels
> buttonpanel Shortcuts add previous_model command prevmodel
> buttonpanel Shortcuts add next_model command nextmodel
> volume defaultvalues limitVoxelCount false voxelLimitForPlane
> 1000000000000000 voxelLimitForOpen 1000000000000000 saveSettings true
Saved volume settings
> buttonpanel Shortcuts add view command view
> buttonpanel Shortcuts add selbetween command "ks ri"
> buttonpanel Shortcuts add rainbow_last command "rainbow last-opened chain
> palette BuPu"
> buttonpanel Shortcuts add rainbow command "rainbow chain palette Bupu"
> buttonpanel Shortcuts add hide_unsel command "hide ~sel & ##selected c,a,s;
> show sel c"
UCSF ChimeraX version: 1.11.1 (2026-01-23)
© 2016-2025 Regents of the University of California. All rights reserved.
How to cite UCSF ChimeraX
Populating font family aliases took 98 ms. Replace uses of missing font family
"Arial, Helvetica, Sans-serif" with one that exists to avoid this cost.
Chain information for fold_2025_01_30_14_44_eif4a3_aly_model_0.cif #1
---
Chain | Description
A | .
B | .
Computing secondary structure
> hide #1 atoms
> hide #1 surfaces
> show #1 cartoons
Found 17 residue or atom pairs within distance 3 with pae <= 30
> name frozen af_contact_residues_model_0
> /A:12,14,16,20,172-173,200,205-206,208,230-231,234-235/B:85-87,89-90,121,124,128,164,168,172,244,246,250
> interfaces select #1&/A contacting #1&/B bothSides true
71 contacting residues
> rainbow #1 chains palette bupu
> color byhetero
> name frozen interface_residues_model_0
> /A:12-14,16-18,20,33,76,165,168-169,172-174,179,196,198-200,202-203,205-211,231-232,234-235,286-287/B:6,81,83-93,121,124-125,128,160,163-164,166-172,175,237,243-244,246-247,250-251,254
> select interface_residues_model_0
616 atoms, 601 bonds, 16 pseudobonds, 71 residues, 2 models selected
> show interface_residues_model_0 atoms
> show interface_residues_model_0 bonds
> style interface_residues_model_0 stick
Changed 616 atom styles
> show af_contact_residues_model_0&sidechain atoms
> show af_contact_residues_model_0&sidechain bonds
> style af_contact_residues_model_0&sidechain stick
Changed 172 atom styles
Opened 1 AF3 top hit pair(s).
Run metadata was written to:
/Users/matthias.vorlaender/Library/CloudStorage/OneDrive-
VBC/scripts/python/Mendel_ChimeraX/Example_data/fold_2025_01_30_14_44_eif4a3_aly/analysis/fold_2025_01_30_14_44_eif4a3_aly/af3-top
Contacts/interfaces were prepared for display. Files are written only when you
use 'Save Contacts and Interfaces' for the active model.
Drag select of 126 atoms, 45 residues, 5 pseudobonds, 109 bonds
> select clear
Drag select of 112 atoms, 39 residues, 4 pseudobonds, 97 bonds
Window position QRect(0,994 600x324) outside any known screen, using primary
screen
Drag select of 147 atoms, 67 residues, 7 pseudobonds, 129 bonds
Drag select of 205 atoms, 80 residues, 10 pseudobonds, 181 bonds
> select /B:257
7 atoms, 6 bonds, 1 residue, 1 model selected
> select add /B:240
12 atoms, 10 bonds, 2 residues, 1 model selected
> ks ri
> select #2.1/B:240-257
140 atoms, 140 bonds, 18 residues, 1 model selected
Drag select of 251 atoms, 205 residues, 12 pseudobonds, 223 bonds
Drag select of 15 atoms, 158 residues, 12 bonds
> select /A:84-233 /B:236-257
> select /A:84-233 /B:236-257
1343 atoms, 1359 bonds, 3 pseudobonds, 172 residues, 2 models selected
Applied PAE hide-unselected to 1 model(s) in this run.
> select /A:82-235 /B:231-257
> hide ~sel & ##selected cartoons,atoms,surfaces
> show sel cartoons
> select /B:99-191 /A:13-18
> select clear
> select /B:99-191 /A:13-18
759 atoms, 768 bonds, 3 pseudobonds, 99 residues, 2 models selected
> select clear
> select /B:257
7 atoms, 6 bonds, 1 residue, 1 model selected
> select add /B:240
12 atoms, 10 bonds, 2 residues, 1 model selected
> ks ri
> select #2.1/B:240-257
140 atoms, 140 bonds, 18 residues, 1 model selected
> select /A:30-242 /B:234-257
Chain information for fold_2026_05_13_13_22_alyref_uap56_thoc2_model_0.cif #1
---
Chain | Description
A | .
B | .
C | .
> hide #1 atoms
> hide #1 surfaces
> show #1 cartoons
Found 12 residue or atom pairs within distance 3 with pae <= 30
Found 0 residue or atom pairs within distance 3 with pae <= 30
> name frozen af_contact_residues_model_0
> #1/A:4,6-7,10,235-236,243-244,248,250-251,254/B:208-210,212,218,241,244,275-276,299,309
> interfaces select #1&/A contacting #1&/B bothSides true
48 contacting residues
> interfaces select #1&/A contacting #1&/C bothSides true
0 contacting residues
> rainbow #1 chains palette bupu
> color byhetero
> name frozen interface_residues_model_0
> #1/A:1,4-6,8-10,12-13,16-17,235,237-238,240,243-244,246-248,250-251,253-254/B:205-206,208-210,212,215-216,220-221,241,244,271-272,275-276,279,298-299,302,306,309-310,362
> select interface_residues_model_0
424 atoms, 402 bonds, 9 pseudobonds, 48 residues, 2 models selected
> show interface_residues_model_0 atoms
> show interface_residues_model_0 bonds
> style interface_residues_model_0 stick
Changed 424 atom styles
> show af_contact_residues_model_0&sidechain atoms
> show af_contact_residues_model_0&sidechain bonds
> style af_contact_residues_model_0&sidechain stick
Changed 137 atom styles
Opened 1 AF3 top hit pair(s).
Run metadata was written to:
/Users/matthias.vorlaender/Library/CloudStorage/OneDrive-
VBC/scripts/python/Mendel_ChimeraX/Example_data/fold_2026_05_13_13_22_alyref_uap56_thoc2/analysis/fold_2026_05_13_13_22_alyref_uap56_thoc2/af3-top
Contacts/interfaces were prepared for display. Files are written only when you
use 'Save Contacts and Interfaces' for the active model.
Computing secondary structure
> select #3.1/B:267 #3.1/A:29
> view
Applied PAE hide-unselected to 1 model(s) in this run.
> view
> hide af_contact_residues_model_0&sidechain atoms
> hide af_contact_residues_model_0&sidechain bonds
Found 0 residue or atom pairs within distance 3 with pae <= 16
Applied PAE show-only and refreshed AlphaFold contacts at threshold 16 for 1
model(s) in this run. Contact display was refreshed for 1 model(s).
Found 0 residue or atom pairs within distance 3 with pae <= 16
No AlphaFold contacts with PAE <= 16 were found for model_0 on chain pair A-C.
Found 0 residue or atom pairs within distance 3 with pae <= 16
No AlphaFold contacts with PAE <= 16 were found for model_0 on chain pair A-C.
Found 0 residue or atom pairs within distance 3 with pae <= 16
No AlphaFold contacts with PAE <= 16 were found for model_0 on chain pair A-C.
> help circosplot
No help found for 'circosplot'
> circosplot
Unknown command: circosplot
> circplot
Unknown command: circplot
> toolshed show
Window position QRect(1903,199 657x1177) outside any known screen, using
primary screen
> circoscontacts
circoscontacts: writing intermediate files to
/var/folders/l8/nt94jvjd7bg27cksyp_hvxnh0000gp/T/circoscontacts_0g_syu17
227 contacts
375 contacts
circoscontacts: wrote
/var/folders/l8/nt94jvjd7bg27cksyp_hvxnh0000gp/T/circoscontacts_0g_syu17/contacts_circos.html
circoscontacts: use the Save HTML button in the page to copy output elsewhere.
circoscontacts: opened HTML in default browser
(/var/folders/l8/nt94jvjd7bg27cksyp_hvxnh0000gp/T/circoscontacts_0g_syu17/contacts_circos.html)
circoscontacts: temporary directory retained for this run to keep artifacts
accessible.
> hide #3.1 atoms
> hide #3.1 pseudobonds
> hide #3.1 surfaces
> show #3.1 cartoons
> select clear
Reset display for AF3 top hit fold_2026_05_13_13_22_alyref_uap56_thoc2.
Applied PAE hide-unselected to 1 model(s) in this run.
> blastprotein #3
Cannot start BLAST job: please choose exactly one chain (3 were specified)
> blastprotein #3/C
Webservices job id: DKPPLNOA9FNN357X
Webservices job finished: DKPPLNOA9FNN357X
Parsing BlastProtein results failed: HTTP Error 415: Unsupported Media Type
OpenGL version: 4.1 Metal - 90.5
OpenGL renderer: Apple M3 Pro
OpenGL vendor: Apple
Python: 3.11.9
Locale: en_US.UTF-8
Qt version: PyQt6 6.9.1, Qt 6.9.0
Qt runtime version: 6.9.2
Qt platform: cocoa
Hardware:
Hardware Overview:
Model Name: MacBook Pro
Model Identifier: Mac15,6
Model Number: Z1AU002HPD/A
Chip: Apple M3 Pro
Total Number of Cores: 11 (5 performance and 6 efficiency)
Memory: 18 GB
System Firmware Version: 13822.61.10
OS Loader Version: 13822.61.10
Software:
System Software Overview:
System Version: macOS 26.2 (25C56)
Kernel Version: Darwin 25.2.0
Time since boot: 15 days, 6 hours, 53 minutes
Graphics/Displays:
Apple M3 Pro:
Chipset Model: Apple M3 Pro
Type: GPU
Bus: Built-In
Total Number of Cores: 14
Vendor: Apple (0x106b)
Metal Support: Metal 4
Displays:
Color LCD:
Display Type: Built-in Liquid Retina XDR Display
Resolution: 3024 x 1964 Retina
Main Display: Yes
Mirror: Off
Online: Yes
Automatically Adjust Brightness: Yes
Connection Type: Internal
HP Z32:
Resolution: 5120 x 2880 (5K/UHD+ - Ultra High Definition Plus)
UI Looks like: 2560 x 1440 @ 60.00Hz
Mirror: Off
Online: Yes
Rotation: Supported
Installed Packages:
aiohappyeyeballs: 2.6.1
aiohttp: 3.13.1
aiosignal: 1.4.0
alabaster: 1.0.0
annotated-types: 0.7.0
anyio: 4.12.1
appdirs: 1.4.4
appnope: 0.1.4
asttokens: 3.0.1
attrs: 25.4.0
babel: 2.17.0
beautifulsoup4: 4.13.5
blockdiag: 3.0.0
blosc2: 3.12.2
build: 1.3.0
certifi: 2025.7.14
cftime: 1.6.5
charset-normalizer: 3.4.4
ChimeraX-AddCharge: 1.5.20
ChimeraX-AddH: 2.2.8
ChimeraX-AFPredictionToolbars: 1.3.22
ChimeraX-AlignmentAlgorithms: 2.0.2
ChimeraX-AlignmentHdrs: 3.6.1
ChimeraX-AlignmentMatrices: 2.1
ChimeraX-Alignments: 3.1.1
ChimeraX-AlphaFold: 1.0.1
ChimeraX-AltlocExplorer: 1.2
ChimeraX-AmberInfo: 1.0
ChimeraX-Animations: 1.0
ChimeraX-Aniso: 1.3.2
ChimeraX-Arrays: 1.1
ChimeraX-Atomic: 1.61.4
ChimeraX-AtomicLibrary: 14.2.1
ChimeraX-AtomSearch: 2.0.1
ChimeraX-AxesPlanes: 2.4
ChimeraX-BasicActions: 1.1.3
ChimeraX-BILD: 1.0
ChimeraX-BlastProtein: 3.0.0
ChimeraX-Boltz: 1.1
ChimeraX-BondRot: 2.0.4
ChimeraX-BugReporter: 1.0.2
ChimeraX-BuildStructure: 2.13.1
ChimeraX-Bumps: 1.0
ChimeraX-BundleBuilder: 1.6.0
ChimeraX-ButtonPanel: 1.0.1
ChimeraX-CageBuilder: 1.0.1
ChimeraX-CellPack: 1.0
ChimeraX-Centroids: 1.4
ChimeraX-ChangeChains: 1.1
ChimeraX-CheckWaters: 1.5
ChimeraX-ChemGroup: 2.0.2
ChimeraX-CircosContacts: 0.4.21
ChimeraX-Clashes: 2.3
ChimeraX-Clipper: 0.26.1
ChimeraX-ColorActions: 1.0.5
ChimeraX-ColorGlobe: 1.0
ChimeraX-ColorKey: 1.5.8
ChimeraX-CommandLine: 1.3.0
ChimeraX-ConnectStructure: 2.0.1
ChimeraX-Contacts: 1.0.1
ChimeraX-Core: 1.11.1
ChimeraX-CoreFormats: 1.2
ChimeraX-coulombic: 1.4.5
ChimeraX-Crosslinks: 1.0
ChimeraX-Crystal: 1.0
ChimeraX-CrystalContacts: 1.0.1
ChimeraX-DataFormats: 1.2.4
ChimeraX-Dicom: 1.2.7
ChimeraX-DistMonitor: 1.4.2
ChimeraX-DockPrep: 1.1.4
ChimeraX-Dssp: 2.0
ChimeraX-EMDB-SFF: 1.0
ChimeraX-ESMFold: 1.0
ChimeraX-FileHistory: 1.0.1
ChimeraX-FunctionKey: 1.0.1
ChimeraX-Geometry: 1.3
ChimeraX-gltf: 1.0
ChimeraX-Graphics: 1.4.1
ChimeraX-Hbonds: 2.5.3
ChimeraX-Help: 1.3
ChimeraX-HKCage: 1.3
ChimeraX-IHM: 1.1
ChimeraX-ImageFormats: 1.2
ChimeraX-IMOD: 1.0
ChimeraX-IO: 1.0.4
ChimeraX-ISOLDE: 1.11.1
ChimeraX-ItemsInspection: 1.0.1
ChimeraX-IUPAC: 1.0
ChimeraX-KVFinder: 1.7.3
ChimeraX-Label: 1.2
ChimeraX-ListInfo: 1.2.2
ChimeraX-Log: 1.2.2
ChimeraX-LookingGlass: 1.1
ChimeraX-LowpassMap: 0.1
ChimeraX-Maestro: 1.9.2
ChimeraX-Map: 1.3
ChimeraX-MapData: 2.0
ChimeraX-MapEraser: 1.0.1
ChimeraX-MapFilter: 2.0.1
ChimeraX-MapFit: 2.0
ChimeraX-MapSeries: 2.1.1
ChimeraX-Markers: 1.0.1
ChimeraX-Mask: 1.0.2
ChimeraX-MatchMaker: 2.2.2
ChimeraX-MCopy: 1.0
ChimeraX-MCPServer: 0.1.0
ChimeraX-MDcrds: 2.17.2
ChimeraX-MedicalToolbar: 1.1
ChimeraX-Meeting: 1.0.1
ChimeraX-Minimize: 1.3.2
ChimeraX-MLP: 1.1.1
ChimeraX-mmCIF: 2.16
ChimeraX-MMTF: 2.2
ChimeraX-ModelArchive: 1.0
ChimeraX-Modeller: 1.5.22
ChimeraX-ModelPanel: 1.6
ChimeraX-ModelSeries: 1.0.1
ChimeraX-Mol2: 2.0.3
ChimeraX-Mole: 1.0
ChimeraX-Morph: 1.0.2
ChimeraX-MouseModes: 1.2
ChimeraX-Movie: 1.0.1
ChimeraX-MutationScores: 1.0
ChimeraX-Neuron: 1.0
ChimeraX-Nifti: 1.2
ChimeraX-NMRSTAR: 1.0.2
ChimeraX-NRRD: 1.2
ChimeraX-Nucleotides: 2.0.3
ChimeraX-OpenCommand: 1.15.2
ChimeraX-OrthoPick: 1.0.1
ChimeraX-PDB: 2.7.12
ChimeraX-PDBBio: 1.0.1
ChimeraX-PDBLibrary: 1.0.5
ChimeraX-PDBMatrices: 1.0
ChimeraX-PickBlobs: 1.0.1
ChimeraX-Positions: 1.0
ChimeraX-PresetMgr: 1.1.4
ChimeraX-ProfileGrids: 1.4.2
ChimeraX-PubChem: 2.2
ChimeraX-ReadPbonds: 1.0.1
ChimeraX-Registration: 1.1.2
ChimeraX-RemoteControl: 1.0
ChimeraX-RenderByAttr: 1.6.5
ChimeraX-RenumberResidues: 1.1
ChimeraX-ResidueFit: 1.0.1
ChimeraX-RestServer: 1.3.3
ChimeraX-RNALayout: 1.0
ChimeraX-RotamerLibMgr: 4.0
ChimeraX-RotamerLibsDunbrack: 2.0
ChimeraX-RotamerLibsDynameomics: 2.0
ChimeraX-RotamerLibsRichardson: 2.0
ChimeraX-SaveCommand: 1.5.2
ChimeraX-Scenes: 0.3.1
ChimeraX-SchemeMgr: 1.0
ChimeraX-SDF: 2.0.3
ChimeraX-Segger: 1.0
ChimeraX-Segment: 1.0.1
ChimeraX-Segmentations: 3.5.10
ChimeraX-SelInspector: 1.0
ChimeraX-SeqView: 2.17.3
ChimeraX-Shape: 1.1
ChimeraX-Shell: 1.0.1
ChimeraX-Shortcuts: 1.2.1
ChimeraX-ShowSequences: 1.0.3
ChimeraX-SideView: 1.0.1
ChimeraX-SimilarStructures: 1.0.1
ChimeraX-Smiles: 2.1.2
ChimeraX-SmoothLines: 1.0
ChimeraX-SpaceNavigator: 1.0
ChimeraX-StdCommands: 1.19.1
ChimeraX-STL: 1.0.1
ChimeraX-Storm: 1.0
ChimeraX-StructMeasure: 1.2.1
ChimeraX-Struts: 1.0.1
ChimeraX-Surface: 1.0.1
ChimeraX-SwapAA: 2.0.1
ChimeraX-SwapRes: 2.5.2
ChimeraX-TapeMeasure: 1.0
ChimeraX-TaskManager: 1.0
ChimeraX-Test: 1.0
ChimeraX-Toolbar: 1.2.3
ChimeraX-ToolshedUtils: 1.2.4
ChimeraX-Topography: 1.0
ChimeraX-ToQuest: 1.0
ChimeraX-Tug: 1.0.1
ChimeraX-UI: 1.49.1
ChimeraX-Umap: 1.0
ChimeraX-uniprot: 2.3.2
ChimeraX-UnitCell: 1.0.1
ChimeraX-ViewDock: 1.5.2
ChimeraX-VIPERdb: 1.0
ChimeraX-Vive: 1.1
ChimeraX-VolumeMenu: 1.0.1
ChimeraX-vrml: 1.0
ChimeraX-VTK: 1.0
ChimeraX-WavefrontOBJ: 1.0
ChimeraX-WebCam: 1.0.2
ChimeraX-WebServices: 1.1.5
ChimeraX-Zone: 1.0.1
click: 8.3.1
colorama: 0.4.6
comm: 0.2.3
contourpy: 1.3.3
coverage: 7.13.1
cxservices: 1.2.3
cycler: 0.12.1
Cython: 3.1.4
debugpy: 1.8.19
decorator: 5.2.1
docutils: 0.21.2
executing: 2.2.1
filelock: 3.19.1
fonttools: 4.61.1
frozenlist: 1.8.0
funcparserlib: 2.0.0a0
glfw: 2.10.0
grako: 3.16.5
h11: 0.16.0
h5py: 3.15.1
html2text: 2025.4.15
httpcore: 1.0.9
httpx: 0.28.1
httpx-sse: 0.4.3
idna: 3.11
ihm: 2.2
imagecodecs: 2024.6.1
imagesize: 1.4.1
iniconfig: 2.3.0
ipykernel: 6.30.1
ipython: 9.5.0
ipython_pygments_lexers: 1.1.1
ipywidgets: 8.1.8
jedi: 0.19.2
Jinja2: 3.1.6
jsonschema: 4.26.0
jsonschema-specifications: 2025.9.1
jupyter_client: 8.6.3
jupyter_core: 5.9.1
jupyterlab_widgets: 3.0.16
kiwisolver: 1.4.9
line_profiler: 5.0.0
lxml: 6.0.2
lz4: 4.3.2
Markdown: 3.8.2
MarkupSafe: 3.0.3
matplotlib: 3.10.7
matplotlib-inline: 0.2.1
mcp: 1.18.0
msgpack: 1.1.1
multidict: 6.7.0
ndindex: 1.10.1
nest-asyncio: 1.6.0
netCDF4: 1.6.5
networkx: 3.3
nibabel: 5.2.0
nptyping: 2.5.0
numexpr: 2.14.1
numpy: 1.26.4
OpenMM: 8.2.0
openvr: 1.26.701
packaging: 25.0
ParmEd: 4.2.2
parso: 0.8.5
pep517: 0.13.1
pexpect: 4.9.0
pickleshare: 0.7.5
pillow: 11.3.0
pip: 25.2
pkginfo: 1.12.1.2
platformdirs: 4.5.1
pluggy: 1.6.0
prompt_toolkit: 3.0.52
propcache: 0.4.1
psutil: 7.0.0
ptyprocess: 0.7.0
pure_eval: 0.2.3
py-cpuinfo: 9.0.0
pybind11: 3.0.1
pycollada: 0.8
pydantic: 2.12.5
pydantic-settings: 2.12.0
pydantic_core: 2.41.5
pydicom: 2.4.4
Pygments: 2.18.0
pynmrstar: 3.3.6
pynrrd: 1.0.0
PyOpenGL: 3.1.10
PyOpenGL-accelerate: 3.1.10
pyopenxr: 1.1.4501
pyparsing: 3.3.2
pyproject_hooks: 1.2.0
PyQt6-commercial: 6.9.1
PyQt6-Qt6: 6.9.2
PyQt6-WebEngine-commercial: 6.9.0
PyQt6-WebEngine-Qt6: 6.9.2
PyQt6_sip: 13.10.2
pytest: 9.0.2
pytest-cov: 7.0.0
python-dateutil: 2.9.0.post0
python-dotenv: 1.2.1
python-multipart: 0.0.21
pyzmq: 27.1.0
qtconsole: 5.7.0
QtPy: 2.4.3
qtshim: 1.2
RandomWords: 0.4.0
referencing: 0.37.0
requests: 2.32.5
roman-numerals: 4.1.0
roman-numerals-py: 4.1.0
rpds-py: 0.30.0
scipy: 1.14.0
setuptools: 80.9.0
sfftk-rw: 0.8.1
six: 1.17.0
snowballstemmer: 3.0.1
sortedcontainers: 2.4.0
soupsieve: 2.8.3
Sphinx: 8.2.3
sphinx-autodoc-typehints: 3.2.0
sphinxcontrib-applehelp: 2.0.0
sphinxcontrib-blockdiag: 3.0.0
sphinxcontrib-devhelp: 2.0.0
sphinxcontrib-htmlhelp: 2.1.0
sphinxcontrib-jsmath: 1.0.1
sphinxcontrib-qthelp: 2.0.0
sphinxcontrib-serializinghtml: 2.0.0
sse-starlette: 3.2.0
stack-data: 0.6.3
starlette: 0.52.1
superqt: 0.7.6
tables: 3.10.2
tcia_utils: 1.5.1
tifffile: 2025.3.13
tinyarray: 1.2.5
tornado: 6.5.4
traitlets: 5.14.3
typing-inspection: 0.4.2
typing_extensions: 4.15.0
urllib3: 2.6.3
uvicorn: 0.40.0
wcwidth: 0.3.2
webcolors: 24.11.1
wheel: 0.45.1
wheel-filename: 1.4.2
widgetsnbextension: 4.0.15
yarl: 1.22.0
Change History (2)
comment:1 by , 2 hours ago
| Cc: | added |
|---|---|
| Component: | Unassigned → Sequence |
| Owner: | set to |
| Platform: | → all |
| Project: | → ChimeraX |
| Status: | new → assigned |
| Summary: | ChimeraX bug report submission → Parsing BlastProtein results failed: HTTP Error 415: Unsupported Media Type |
comment:2 by , 2 hours ago
| Resolution: | → duplicate |
|---|---|
| Status: | assigned → closed |
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Hi Matthias,
--Eric