Opened 6 years ago

Closed 6 years ago

#1988 closed defect (fixed)

chain trace pbond shown when displaying sequence-adjacent sidechains

Reported by: Elaine Meng Owned by: Eric Pettersen
Priority: minor Milestone:
Component: Depiction Version:
Keywords: Cc:
Blocked By: Blocking:
Notify when closed: Platform: all
Project: ChimeraX

Description

This may not be avoidable (how can you distinguish it from cases where the user wants the chain-trace pseudobond?), but reporting in case you have ideas:

open 1zik
show :2-3 & sidechain

... you can see an additional stick-style pbond between the CA atoms. This could also occur, for example, when "reveal true" with H-bonds or contacts shows adjacent sidechains but not their backbone atoms.

Change History (4)

comment:1 by Eric Pettersen, 6 years ago

Status: assigned → accepted

comment:2 by Tristan Croll, 6 years ago

Would it make sense to suppress chain-trace pseudobonds wherever both residues have their ribbon shown? Is there any situation where you'd want both chain-trace *and* ribbon for the same residues?

comment:3 by Eric Pettersen, 6 years ago

That's the general plan. Will have to look into the gory details to determine feasibility.

comment:4 by Eric Pettersen, 6 years ago

Resolution: → fixed
Status: accepted → closed

Chain traces are no longer shown if both residues have ribbon depictions

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