Opened 6 years ago

Closed 6 years ago

#1932 closed defect (fixed)

mlp should only work on proteins

Reported by: Elaine Meng Owned by: Tom Goddard
Priority: moderate Milestone:
Component: Depiction Version:
Keywords: Cc:
Blocked By: Blocking:
Notify when closed: Platform: all
Project: ChimeraX

Description

Probably there should be some preliminary filtering to only run mlp (command and icon) on polymer type protein. The GitHub pyMLP description says it is for proteins.
​https://github.com/plantigrade/pyMLP

Running mlp on nucleotides (e.g. 1bna) does something but doesn't appear meaningful.

Change History (2)

comment:1 by Elaine Meng, 6 years ago

if don't want to modify command itself, maybe icon could do "mlp selAtoms & protein"

comment:2 by Tom Goddard, 6 years ago

Resolution: → fixed
Status: assigned → closed

Fixed.

Yes mlp only has tables for proteins. I've changed the mlp command so it filters out all the non-amino-acid atoms.

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