Opened 4 weeks ago

Closed 4 weeks ago

#19079 closed defect (can't reproduce)

glClear: invalid framebuffer operation

Reported by: chimerax-bug-report@… Owned by: Tom Goddard
Priority: normal Milestone:
Component: Graphics Version:
Keywords: Cc:
Blocked By: Blocking:
Notify when closed: Platform: all
Project: ChimeraX

Description 

The following bug report has been submitted:
Platform:        macOS-26.0.1-arm64-arm-64bit
ChimeraX Version: 1.10 (2025-06-26 08:57:52 UTC)
Description
Replace this text with list of actions that caused this problem to occur

Log:
UCSF ChimeraX version: 1.10 (2025-06-26)  
© 2016-2025 Regents of the University of California. All rights reserved.  
How to cite UCSF ChimeraX  

> open "/Users/johnteare/Library/CloudStorage/OneDrive-
> Personal/Documents/Protein BioLabs/Biotech
> Tools/Discovery/Structures/10-2025/20251007/Seq99_M/outputs/163/boltz_results_163/predictions/163/163_model_0.cif"

163_model_0.cif title:  
. [more info...]  
  
Chain information for 163_model_0.cif #1  
---  
Chain | Description  
A | .  
B | .  
  
Color 163_model_0.cif by residue attribute pLDDT_score  
Computing secondary structure  

> set bgColor white

> select /A:1-238

1812 atoms, 1852 bonds, 238 residues, 1 model selected  

> show sel surfaces

> close

> open "/Users/johnteare/Library/CloudStorage/OneDrive-
> Personal/Documents/Protein BioLabs/Biotech
> Tools/Discovery/Structures/10-2025/20251007/Seq99_M/outputs/59/boltz_results_59/predictions/59/59_model_0.cif"

59_model_0.cif title:  
. [more info...]  
  
Chain information for 59_model_0.cif #1  
---  
Chain | Description  
A | .  
B | .  
  
Color 59_model_0.cif by residue attribute pLDDT_score  
Computing secondary structure  

> show atoms

> hbonds reveal true

304 hydrogen bonds found  

> select /A:1-238

1812 atoms, 1852 bonds, 202 pseudobonds, 238 residues, 2 models selected  

> show sel surfaces

> close

> open "/Users/johnteare/Library/CloudStorage/OneDrive-
> Personal/Documents/Protein BioLabs/Biotech
> Tools/Discovery/Structures/10-2025/20251007/Seq99_M/outputs/179/boltz_results_179/predictions/179/179_model_0.cif"

179_model_0.cif title:  
. [more info...]  
  
Chain information for 179_model_0.cif #1  
---  
Chain | Description  
A | .  
B | .  
  
Color 179_model_0.cif by residue attribute pLDDT_score  
Computing secondary structure  

> show atoms

> hbonds reveal true

290 hydrogen bonds found  

> select /A:1-238

1812 atoms, 1852 bonds, 189 pseudobonds, 238 residues, 2 models selected  

> show sel surfaces

> close

> open "/Users/johnteare/Library/CloudStorage/OneDrive-
> Personal/Documents/Protein BioLabs/Biotech
> Tools/Discovery/Structures/10-2025/20251007/Seq99_M/outputs/50/boltz_results_50/predictions/50/50_model_0.cif"

50_model_0.cif title:  
. [more info...]  
  
Chain information for 50_model_0.cif #1  
---  
Chain | Description  
A | .  
B | .  
  
Color 50_model_0.cif by residue attribute pLDDT_score  
Computing secondary structure  

> show atoms

> hbonds reveal true

301 hydrogen bonds found  

> select /A:1-238

1812 atoms, 1852 bonds, 199 pseudobonds, 238 residues, 2 models selected  

> show sel surfaces

> close

> open "/Users/johnteare/Library/CloudStorage/OneDrive-
> Personal/Documents/Protein BioLabs/Biotech
> Tools/Discovery/Structures/10-2025/20251007/Seq99_M/outputs/45/boltz_results_45/predictions/45/45_model_0.cif"

45_model_0.cif title:  
. [more info...]  
  
Chain information for 45_model_0.cif #1  
---  
Chain | Description  
A | .  
B | .  
  
Color 45_model_0.cif by residue attribute pLDDT_score  
Computing secondary structure  

> show atoms

> hbonds reveal true

303 hydrogen bonds found  

> select /A:1-238

1812 atoms, 1852 bonds, 196 pseudobonds, 238 residues, 2 models selected  

> show sel surfaces

> close

> open "/Users/johnteare/Library/CloudStorage/OneDrive-
> Personal/Documents/Protein BioLabs/Biotech
> Tools/Discovery/Structures/10-2025/20251007/Seq99_M/outputs/4/boltz_results_4/predictions/4/4_model_0.cif"

4_model_0.cif title:  
. [more info...]  
  
Chain information for 4_model_0.cif #1  
---  
Chain | Description  
A | .  
B | .  
  
Color 4_model_0.cif by residue attribute pLDDT_score  
Computing secondary structure  

> show atoms

> ~hbonds

> hbonds reveal true

310 hydrogen bonds found  

> select /A:1-238

1812 atoms, 1852 bonds, 202 pseudobonds, 238 residues, 2 models selected  

> show sel surfaces

> open "/Users/johnteare/Library/CloudStorage/OneDrive-
> Personal/Documents/Protein BioLabs/Biotech
> Tools/Discovery/Structures/10-2025/20251007/Seq99_M/outputs/35/boltz_results_35/predictions/35/35_model_0.cif"

35_model_0.cif title:  
. [more info...]  
  
Chain information for 35_model_0.cif #2  
---  
Chain | Description  
A | .  
B | .  
  
Color 35_model_0.cif by residue attribute pLDDT_score  
Computing secondary structure  

> hide #!1 models

> show #2 atoms

> hbonds #2 reveal true

419 hydrogen bonds found  

> select #2/A:1-238

1812 atoms, 1852 bonds, 197 pseudobonds, 238 residues, 2 models selected  

> show sel surfaces

> close

> open "/Users/johnteare/Library/CloudStorage/OneDrive-
> Personal/Documents/Protein BioLabs/Biotech
> Tools/Discovery/Structures/10-2025/20251007/Seq99_M/outputs/164/boltz_results_164/predictions/164/164_model_0.cif"

164_model_0.cif title:  
. [more info...]  
  
Chain information for 164_model_0.cif #1  
---  
Chain | Description  
A | .  
B | .  
  
Color 164_model_0.cif by residue attribute pLDDT_score  
Computing secondary structure  

> show atoms

> hbonds reveal true

308 hydrogen bonds found  

> select /A:1-238

1812 atoms, 1852 bonds, 204 pseudobonds, 238 residues, 2 models selected  

> show sel surfaces

> close

> open "/Users/johnteare/Library/CloudStorage/OneDrive-
> Personal/Documents/Protein BioLabs/Biotech
> Tools/Discovery/Structures/10-2025/20251007/Seq99_M/outputs/142/boltz_results_142/predictions/142/142_model_0.cif"

142_model_0.cif title:  
. [more info...]  
  
Chain information for 142_model_0.cif #1  
---  
Chain | Description  
A | .  
B | .  
  
Color 142_model_0.cif by residue attribute pLDDT_score  
Computing secondary structure  

> show atoms

> hbonds reveal true

295 hydrogen bonds found  

> select /A:1-238

1812 atoms, 1852 bonds, 194 pseudobonds, 238 residues, 2 models selected  

> show sel surfaces

> close

> open "/Users/johnteare/Library/CloudStorage/OneDrive-
> Personal/Documents/Protein BioLabs/Biotech
> Tools/Discovery/Structures/10-2025/20251007/Seq99_M/outputs/12/boltz_results_12/predictions/12/12_model_0.cif"

12_model_0.cif title:  
. [more info...]  
  
Chain information for 12_model_0.cif #1  
---  
Chain | Description  
A | .  
B | .  
  
Color 12_model_0.cif by residue attribute pLDDT_score  
Computing secondary structure  

> show atoms

> hbonds reveal true

302 hydrogen bonds found  

> select /A:1-238

1812 atoms, 1852 bonds, 202 pseudobonds, 238 residues, 2 models selected  

> show sel surfaces

> close

> open "/Users/johnteare/Library/CloudStorage/OneDrive-
> Personal/Documents/Protein BioLabs/Biotech
> Tools/Discovery/Structures/10-2025/20251007/Seq99_M/outputs/161/boltz_results_161/predictions/161/161_model_0.cif"

161_model_0.cif title:  
. [more info...]  
  
Chain information for 161_model_0.cif #1  
---  
Chain | Description  
A | .  
B | .  
  
Color 161_model_0.cif by residue attribute pLDDT_score  
Computing secondary structure  

> show atoms

> hbonds reveal true

303 hydrogen bonds found  

> select /A:1-238

1812 atoms, 1852 bonds, 202 pseudobonds, 238 residues, 2 models selected  

> show sel surfaces

> close

> open "/Users/johnteare/Library/CloudStorage/OneDrive-
> Personal/Documents/Protein BioLabs/Biotech
> Tools/Discovery/Structures/10-2025/20251007/Seq99_M/outputs/180/boltz_results_180/predictions/180/180_model_0.cif"

180_model_0.cif title:  
. [more info...]  
  
Chain information for 180_model_0.cif #1  
---  
Chain | Description  
A | .  
B | .  
  
Color 180_model_0.cif by residue attribute pLDDT_score  
Computing secondary structure  

> show atoms

> hbonds reveal true

297 hydrogen bonds found  

> select /A:1-238

1812 atoms, 1852 bonds, 195 pseudobonds, 238 residues, 2 models selected  

> show sel surfaces

> close

> open "/Users/johnteare/Library/CloudStorage/OneDrive-
> Personal/Documents/Protein BioLabs/Biotech
> Tools/Discovery/Structures/10-2025/20251007/Seq99_M/outputs/136/boltz_results_136/predictions/136/136_model_0.cif"

136_model_0.cif title:  
. [more info...]  
  
Chain information for 136_model_0.cif #1  
---  
Chain | Description  
A | .  
B | .  
  
Color 136_model_0.cif by residue attribute pLDDT_score  
Computing secondary structure  

> show atoms

> hbonds reveal true

290 hydrogen bonds found  

> select /A:1-238

1812 atoms, 1852 bonds, 194 pseudobonds, 238 residues, 2 models selected  

> show sel surfaces

> close

> open "/Users/johnteare/Library/CloudStorage/OneDrive-
> Personal/Documents/Protein BioLabs/Biotech
> Tools/Discovery/Structures/10-2025/20251007/Seq99_M/outputs/118/boltz_results_118/predictions/118/118_model_0.cif"

118_model_0.cif title:  
. [more info...]  
  
Chain information for 118_model_0.cif #1  
---  
Chain | Description  
A | .  
B | .  
  
Color 118_model_0.cif by residue attribute pLDDT_score  
Computing secondary structure  

> show atoms

> hbonds reveal true

299 hydrogen bonds found  

> select /A:1-238

1812 atoms, 1852 bonds, 196 pseudobonds, 238 residues, 2 models selected  

> show sel surfaces

> close

> open "/Users/johnteare/Library/CloudStorage/OneDrive-
> Personal/Documents/Protein BioLabs/Biotech
> Tools/Discovery/Structures/10-2025/20251007/Seq99_M/outputs/57/boltz_results_57/predictions/57/57_model_0.cif"

57_model_0.cif title:  
. [more info...]  
  
Chain information for 57_model_0.cif #1  
---  
Chain | Description  
A | .  
B | .  
  
Color 57_model_0.cif by residue attribute pLDDT_score  
Computing secondary structure  

> show atoms

> hbonds reveal true

314 hydrogen bonds found  

> select /A:1-238

1812 atoms, 1852 bonds, 206 pseudobonds, 238 residues, 2 models selected  

> show sel surfaces

> close

> open "/Users/johnteare/Library/CloudStorage/OneDrive-
> Personal/Documents/Protein BioLabs/Biotech
> Tools/Discovery/Structures/10-2025/20251007/Seq99_M/outputs/178/boltz_results_178/predictions/178/178_model_0.cif"

178_model_0.cif title:  
. [more info...]  
  
Chain information for 178_model_0.cif #1  
---  
Chain | Description  
A | .  
B | .  
  
Color 178_model_0.cif by residue attribute pLDDT_score  
Computing secondary structure  

> show atoms

> hbonds reveal true

292 hydrogen bonds found  

> select /A:1-238

1812 atoms, 1852 bonds, 196 pseudobonds, 238 residues, 2 models selected  

> show sel surfaces

> close

> open "/Users/johnteare/Library/CloudStorage/OneDrive-
> Personal/Documents/Protein BioLabs/Biotech
> Tools/Discovery/Structures/10-2025/20251007/Seq99_M/outputs/182/boltz_results_182/predictions/182/182_model_0.cif"

182_model_0.cif title:  
. [more info...]  
  
Chain information for 182_model_0.cif #1  
---  
Chain | Description  
A | .  
B | .  
  
Color 182_model_0.cif by residue attribute pLDDT_score  
Computing secondary structure  

> show atoms

> hbonds reveal true

302 hydrogen bonds found  

> select /A:1-238

1812 atoms, 1852 bonds, 194 pseudobonds, 238 residues, 2 models selected  

> show sel surfaces

> hide sel surfaces

> show sel surfaces

> hide sel surfaces

> close

> open "/Users/johnteare/Library/CloudStorage/OneDrive-
> Personal/Documents/Protein BioLabs/Biotech
> Tools/Discovery/Structures/10-2025/20251007/Seq99_M/outputs/112/boltz_results_112/predictions/112/112_model_0.cif"

112_model_0.cif title:  
. [more info...]  
  
Chain information for 112_model_0.cif #1  
---  
Chain | Description  
A | .  
B | .  
  
Color 112_model_0.cif by residue attribute pLDDT_score  
Computing secondary structure  

> show atoms

> hbonds reveal true

291 hydrogen bonds found  

> select /A:1-238

1812 atoms, 1852 bonds, 190 pseudobonds, 238 residues, 2 models selected  

> show sel surfaces

> close

> open "/Users/johnteare/Library/CloudStorage/OneDrive-
> Personal/Documents/Protein BioLabs/Biotech
> Tools/Discovery/Structures/10-2025/20251007/Seq99_M/outputs/123/boltz_results_123/predictions/123/123_model_0.cif"

123_model_0.cif title:  
. [more info...]  
  
Chain information for 123_model_0.cif #1  
---  
Chain | Description  
A | .  
B | .  
  
Color 123_model_0.cif by residue attribute pLDDT_score  
Computing secondary structure  

> show atoms

> hbonds reveal true

299 hydrogen bonds found  

> select /A:1-238

1812 atoms, 1852 bonds, 198 pseudobonds, 238 residues, 2 models selected  

> show sel surfaces

> close

> open "/Users/johnteare/Library/CloudStorage/OneDrive-
> Personal/Documents/Protein BioLabs/Biotech
> Tools/Discovery/Structures/10-2025/20251007/Seq99_M/outputs/71/boltz_results_71/predictions/71/71_model_0.cif"

71_model_0.cif title:  
. [more info...]  
  
Chain information for 71_model_0.cif #1  
---  
Chain | Description  
A | .  
B | .  
  
Color 71_model_0.cif by residue attribute pLDDT_score  
Computing secondary structure  

> show atoms

> hbonds reveal true

299 hydrogen bonds found  

> select /A:1-238

1812 atoms, 1852 bonds, 198 pseudobonds, 238 residues, 2 models selected  

> show sel surfaces

> close

> open "/Users/johnteare/Library/CloudStorage/OneDrive-
> Personal/Documents/Protein BioLabs/Biotech
> Tools/Discovery/Structures/10-2025/20251007/Seq99_M/outputs/106/boltz_results_106/predictions/106/106_model_0.cif"

106_model_0.cif title:  
. [more info...]  
  
Chain information for 106_model_0.cif #1  
---  
Chain | Description  
A | .  
B | .  
  
Color 106_model_0.cif by residue attribute pLDDT_score  
Computing secondary structure  

> show atoms

> hbonds reveal true

299 hydrogen bonds found  

> select /A:1-238

1812 atoms, 1852 bonds, 194 pseudobonds, 238 residues, 2 models selected  

> show sel surfaces

[Repeated 1 time(s)]

> hide sel surfaces

> show sel surfaces

> close

> open "/Users/johnteare/Library/CloudStorage/OneDrive-
> Personal/Documents/Protein BioLabs/Biotech
> Tools/Discovery/Structures/10-2025/20251007/Seq99_M/outputs/19/boltz_results_19/predictions/19/19_model_0.cif"

19_model_0.cif title:  
. [more info...]  
  
Chain information for 19_model_0.cif #1  
---  
Chain | Description  
A | .  
B | .  
  
Color 19_model_0.cif by residue attribute pLDDT_score  
Computing secondary structure  

> show atoms

> hbonds reveal true

292 hydrogen bonds found  

> select /A:1-238

1812 atoms, 1852 bonds, 193 pseudobonds, 238 residues, 2 models selected  

> show sel surfaces

> close

> open "/Users/johnteare/Library/CloudStorage/OneDrive-
> Personal/Documents/Protein BioLabs/Biotech
> Tools/Discovery/Structures/10-2025/20251007/Seq99_M/outputs/87/boltz_results_87/predictions/87/87_model_0.cif"

87_model_0.cif title:  
. [more info...]  
  
Chain information for 87_model_0.cif #1  
---  
Chain | Description  
A | .  
B | .  
  
Color 87_model_0.cif by residue attribute pLDDT_score  
Computing secondary structure  

> show atoms

> hbonds reveal true

293 hydrogen bonds found  

> select /A:1-238

1812 atoms, 1852 bonds, 198 pseudobonds, 238 residues, 2 models selected  

> show sel surfaces

> close

> open "/Users/johnteare/Library/CloudStorage/OneDrive-
> Personal/Documents/Protein BioLabs/Biotech
> Tools/Discovery/Structures/10-2025/20251007/Seq99_M/outputs/167/boltz_results_167/predictions/167/167_model_0.cif"

167_model_0.cif title:  
. [more info...]  
  
Chain information for 167_model_0.cif #1  
---  
Chain | Description  
A | .  
B | .  
  
Color 167_model_0.cif by residue attribute pLDDT_score  
Computing secondary structure  

> show atoms

> hbonds reveal true

295 hydrogen bonds found  

> select /A:1-238

1812 atoms, 1852 bonds, 193 pseudobonds, 238 residues, 2 models selected  

> show sel surfaces

> close

> open "/Users/johnteare/Library/CloudStorage/OneDrive-
> Personal/Documents/Protein BioLabs/Biotech
> Tools/Discovery/Structures/10-2025/20251007/Seq99_M/outputs/157/boltz_results_157/predictions/157/157_model_0.cif"

157_model_0.cif title:  
. [more info...]  
  
Chain information for 157_model_0.cif #1  
---  
Chain | Description  
A | .  
B | .  
  
Color 157_model_0.cif by residue attribute pLDDT_score  
Computing secondary structure  

> show atoms

> hbonds reveal true

292 hydrogen bonds found  

> select /A:1-238

1812 atoms, 1852 bonds, 193 pseudobonds, 238 residues, 2 models selected  

> show sel surfaces

> close

> open "/Users/johnteare/Library/CloudStorage/OneDrive-
> Personal/Documents/Protein BioLabs/Biotech
> Tools/Discovery/Structures/10-2025/20251007/Seq99_M/outputs/76/boltz_results_76/predictions/76/76_model_0.cif"

76_model_0.cif title:  
. [more info...]  
  
Chain information for 76_model_0.cif #1  
---  
Chain | Description  
A | .  
B | .  
  
Color 76_model_0.cif by residue attribute pLDDT_score  
Computing secondary structure  

> show atoms

> hbonds reveal true

297 hydrogen bonds found  

> select /A:1-238

1812 atoms, 1852 bonds, 192 pseudobonds, 238 residues, 2 models selected  

> show sel surfaces

> close

> open "/Users/johnteare/Library/CloudStorage/OneDrive-
> Personal/Documents/Protein BioLabs/Biotech
> Tools/Discovery/Structures/10-2025/20251007/Seq99_M/outputs/156/boltz_results_156/predictions/156/156_model_0.cif"

156_model_0.cif title:  
. [more info...]  
  
Chain information for 156_model_0.cif #1  
---  
Chain | Description  
A | .  
B | .  
  
Color 156_model_0.cif by residue attribute pLDDT_score  
Computing secondary structure  

> show atoms

> hbonds reveal true

305 hydrogen bonds found  

> select /A:1-238

1812 atoms, 1852 bonds, 204 pseudobonds, 238 residues, 2 models selected  

> show sel surfaces

> close

> open "/Users/johnteare/Library/CloudStorage/OneDrive-
> Personal/Documents/Protein BioLabs/Biotech
> Tools/Discovery/Structures/10-2025/20251007/Seq99_M/outputs/11/boltz_results_11/predictions/11/11_model_0.cif"

11_model_0.cif title:  
. [more info...]  
  
Chain information for 11_model_0.cif #1  
---  
Chain | Description  
A | .  
B | .  
  
Color 11_model_0.cif by residue attribute pLDDT_score  
Computing secondary structure  

> show atoms

> hbonds reveal true

300 hydrogen bonds found  

> select /A:1-238

1812 atoms, 1852 bonds, 199 pseudobonds, 238 residues, 2 models selected  

> show sel surfaces

> close

> open "/Users/johnteare/Library/CloudStorage/OneDrive-
> Personal/Documents/Protein BioLabs/Biotech
> Tools/Discovery/Structures/10-2025/20251007/Seq99_M/outputs/9/boltz_results_9/predictions/9/9_model_0.cif"

9_model_0.cif title:  
. [more info...]  
  
Chain information for 9_model_0.cif #1  
---  
Chain | Description  
A | .  
B | .  
  
Color 9_model_0.cif by residue attribute pLDDT_score  
Computing secondary structure  

> show atoms

> hbonds reveal true

313 hydrogen bonds found  

> select /A:1-238

1812 atoms, 1852 bonds, 202 pseudobonds, 238 residues, 2 models selected  

> show sel surfaces

> close

> open "/Users/johnteare/Library/CloudStorage/OneDrive-
> Personal/Documents/Protein BioLabs/Biotech
> Tools/Discovery/Structures/10-2025/20251007/Seq99_M/outputs/22/boltz_results_22/predictions/22/22_model_0.cif"

22_model_0.cif title:  
. [more info...]  
  
Chain information for 22_model_0.cif #1  
---  
Chain | Description  
A | .  
B | .  
  
Color 22_model_0.cif by residue attribute pLDDT_score  
Computing secondary structure  

> show atoms

> hbonds reveal true

300 hydrogen bonds found  

> select /A:1-238

1812 atoms, 1852 bonds, 199 pseudobonds, 238 residues, 2 models selected  

> show sel surfaces

> close

> open "/Users/johnteare/Library/CloudStorage/OneDrive-
> Personal/Documents/Protein BioLabs/Biotech
> Tools/Discovery/Structures/10-2025/20251007/Seq99_M/outputs/103/boltz_results_103/predictions/103/103_model_0.cif"

103_model_0.cif title:  
. [more info...]  
  
Chain information for 103_model_0.cif #1  
---  
Chain | Description  
A | .  
B | .  
  
Color 103_model_0.cif by residue attribute pLDDT_score  
Computing secondary structure  

> show atoms

> hbonds reveal true

296 hydrogen bonds found  

> select /A:1-238

1812 atoms, 1852 bonds, 196 pseudobonds, 238 residues, 2 models selected  

> show sel surfaces

> close

> open "/Users/johnteare/Library/CloudStorage/OneDrive-
> Personal/Documents/Protein BioLabs/Biotech
> Tools/Discovery/Structures/10-2025/20251007/Seq99_M/outputs/199/boltz_results_199/predictions/199/199_model_0.cif"

199_model_0.cif title:  
. [more info...]  
  
Chain information for 199_model_0.cif #1  
---  
Chain | Description  
A | .  
B | .  
  
Color 199_model_0.cif by residue attribute pLDDT_score  
Computing secondary structure  

> show atoms

> hbonds reveal true

294 hydrogen bonds found  

> select /A:1-238

1812 atoms, 1852 bonds, 195 pseudobonds, 238 residues, 2 models selected  

> show sel surfaces

> close

> open "/Users/johnteare/Library/CloudStorage/OneDrive-
> Personal/Documents/Protein BioLabs/Biotech
> Tools/Discovery/Structures/10-2025/20251007/Seq99_M/outputs/55/boltz_results_55/predictions/55/55_model_0.cif"

55_model_0.cif title:  
. [more info...]  
  
Chain information for 55_model_0.cif #1  
---  
Chain | Description  
A | .  
B | .  
  
Color 55_model_0.cif by residue attribute pLDDT_score  
Computing secondary structure  

> show atoms

> hbonds reveal true

296 hydrogen bonds found  

> select /A:1-238

1812 atoms, 1852 bonds, 197 pseudobonds, 238 residues, 2 models selected  

> show sel surfaces

> close

> open "/Users/johnteare/Library/CloudStorage/OneDrive-
> Personal/Documents/Protein BioLabs/Biotech
> Tools/Discovery/Structures/10-2025/20251007/Seq99_M/outputs/192/boltz_results_192/predictions/192/192_model_0.cif"

192_model_0.cif title:  
. [more info...]  
  
Chain information for 192_model_0.cif #1  
---  
Chain | Description  
A | .  
B | .  
  
Color 192_model_0.cif by residue attribute pLDDT_score  
Computing secondary structure  

> show atoms

> hbonds reveal true

283 hydrogen bonds found  

> select /A:1-238

1812 atoms, 1852 bonds, 182 pseudobonds, 238 residues, 2 models selected  

> show sel surfaces

> hide sel surfaces

> close

> open "/Users/johnteare/Library/CloudStorage/OneDrive-
> Personal/Documents/Protein BioLabs/Biotech
> Tools/Discovery/Structures/10-2025/20251007/Seq99_M/outputs/38/boltz_results_38/predictions/38/38_model_0.cif"

38_model_0.cif title:  
. [more info...]  
  
Chain information for 38_model_0.cif #1  
---  
Chain | Description  
A | .  
B | .  
  
Color 38_model_0.cif by residue attribute pLDDT_score  
Computing secondary structure  

> show atoms

> hbonds reveal true

302 hydrogen bonds found  

> select /A:1-238

1812 atoms, 1852 bonds, 200 pseudobonds, 238 residues, 2 models selected  

> show sel surfaces

> hide sel surfaces

> show sel surfaces

> close

> open "/Users/johnteare/Library/CloudStorage/OneDrive-
> Personal/Documents/Protein BioLabs/Biotech
> Tools/Discovery/Structures/10-2025/20251007/Seq99_M/outputs/26/boltz_results_26/predictions/26/26_model_0.cif"

26_model_0.cif title:  
. [more info...]  
  
Chain information for 26_model_0.cif #1  
---  
Chain | Description  
A | .  
B | .  
  
Color 26_model_0.cif by residue attribute pLDDT_score  
Computing secondary structure  

> show atoms

> hbonds reveal true

297 hydrogen bonds found  

> select /A:1-238

1812 atoms, 1852 bonds, 197 pseudobonds, 238 residues, 2 models selected  

> show sel surfaces

> close

> open "/Users/johnteare/Library/CloudStorage/OneDrive-
> Personal/Documents/Protein BioLabs/Biotech
> Tools/Discovery/Structures/10-2025/20251007/Seq99_M/outputs/78/boltz_results_78/predictions/78/78_model_0.cif"

78_model_0.cif title:  
. [more info...]  
  
Chain information for 78_model_0.cif #1  
---  
Chain | Description  
A | .  
B | .  
  
Color 78_model_0.cif by residue attribute pLDDT_score  
Computing secondary structure  

> show atoms

> hbonds reveal true

302 hydrogen bonds found  

> select /A:1-238

1812 atoms, 1852 bonds, 196 pseudobonds, 238 residues, 2 models selected  

> show sel surfaces

[Repeated 1 time(s)]

> hide sel surfaces

> close

> open "/Users/johnteare/Library/CloudStorage/OneDrive-
> Personal/Documents/Protein BioLabs/Biotech
> Tools/Discovery/Structures/10-2025/20251007/Seq99_M/outputs/73/boltz_results_73/predictions/73/73_model_0.cif"

73_model_0.cif title:  
. [more info...]  
  
Chain information for 73_model_0.cif #1  
---  
Chain | Description  
A | .  
B | .  
  
Color 73_model_0.cif by residue attribute pLDDT_score  
Computing secondary structure  

> show atoms

> hbonds reveal true

295 hydrogen bonds found  

> select /A:1-238

1812 atoms, 1852 bonds, 199 pseudobonds, 238 residues, 2 models selected  

> show sel surfaces

> close

> open "/Users/johnteare/Library/CloudStorage/OneDrive-
> Personal/Documents/Protein BioLabs/Biotech
> Tools/Discovery/Structures/10-2025/20251007/Seq99_M/outputs/67/boltz_results_67/predictions/67/67_model_0.cif"

67_model_0.cif title:  
. [more info...]  
  
Chain information for 67_model_0.cif #1  
---  
Chain | Description  
A | .  
B | .  
  
Color 67_model_0.cif by residue attribute pLDDT_score  
Computing secondary structure  

> show atoms

> hbonds reveal true

302 hydrogen bonds found  

> select /A:1-238

1812 atoms, 1852 bonds, 195 pseudobonds, 238 residues, 2 models selected  

> show sel surfaces

> close

> open "/Users/johnteare/Library/CloudStorage/OneDrive-
> Personal/Documents/Protein BioLabs/Biotech
> Tools/Discovery/Structures/10-2025/20251007/Seq99_M/outputs/88/boltz_results_88/predictions/88/88_model_0.cif"

88_model_0.cif title:  
. [more info...]  
  
Chain information for 88_model_0.cif #1  
---  
Chain | Description  
A | .  
B | .  
  
Color 88_model_0.cif by residue attribute pLDDT_score  
Computing secondary structure  

> show atoms

> hbonds reveal true

301 hydrogen bonds found  

> select /A:1-238

1812 atoms, 1852 bonds, 195 pseudobonds, 238 residues, 2 models selected  

> show sel surfaces

> hide sel surfaces

> show sel surfaces

> close

> open "/Users/johnteare/Library/CloudStorage/OneDrive-
> Personal/Documents/Protein BioLabs/Biotech
> Tools/Discovery/Structures/10-2025/20251007/Seq99_M/outputs/197/boltz_results_197/predictions/197/197_model_0.cif"

197_model_0.cif title:  
. [more info...]  
  
Chain information for 197_model_0.cif #1  
---  
Chain | Description  
A | .  
B | .  
  
Color 197_model_0.cif by residue attribute pLDDT_score  
Computing secondary structure  

> show atoms

> hbonds reveal true

290 hydrogen bonds found  

> select /A:1-238

1812 atoms, 1852 bonds, 191 pseudobonds, 238 residues, 2 models selected  

> show sel surfaces

> close

> open "/Users/johnteare/Library/CloudStorage/OneDrive-
> Personal/Documents/Protein BioLabs/Biotech
> Tools/Discovery/Structures/10-2025/20251007/Seq99_M/outputs/86/boltz_results_86/predictions/86/86_model_0.cif"

86_model_0.cif title:  
. [more info...]  
  
Chain information for 86_model_0.cif #1  
---  
Chain | Description  
A | .  
B | .  
  
Color 86_model_0.cif by residue attribute pLDDT_score  
Computing secondary structure  

> show atoms

> hbonds reveal true

304 hydrogen bonds found  

> select /A:1-238

1812 atoms, 1852 bonds, 197 pseudobonds, 238 residues, 2 models selected  

> show sel surfaces

> close

> open "/Users/johnteare/Library/CloudStorage/OneDrive-
> Personal/Documents/Protein BioLabs/Biotech
> Tools/Discovery/Structures/10-2025/20251007/New
> Seq/outputs/160/boltz_results_160/predictions/160/160_model_0.cif"

160_model_0.cif title:  
. [more info...]  
  
Chain information for 160_model_0.cif #1  
---  
Chain | Description  
A | .  
B | .  
  
Color 160_model_0.cif by residue attribute pLDDT_score  
Computing secondary structure  

> show atoms

> hbonds reveal true

295 hydrogen bonds found  

> select /A:1-238

1812 atoms, 1852 bonds, 191 pseudobonds, 238 residues, 2 models selected  

> show sel surfaces

[Repeated 1 time(s)]

> hide sel surfaces

> show sel surfaces

> close

> open "/Users/johnteare/Library/CloudStorage/OneDrive-
> Personal/Documents/Protein BioLabs/Biotech
> Tools/Discovery/Structures/10-2025/20251007/New
> Seq/outputs/139/boltz_results_139/predictions/139/139_model_0.cif"

139_model_0.cif title:  
. [more info...]  
  
Chain information for 139_model_0.cif #1  
---  
Chain | Description  
A | .  
B | .  
  
Color 139_model_0.cif by residue attribute pLDDT_score  
Computing secondary structure  

> show atoms

> hbonds reveal true

300 hydrogen bonds found  

> select /A:1-238

1812 atoms, 1852 bonds, 198 pseudobonds, 238 residues, 2 models selected  

> show sel surfaces

> hide sel surfaces

> close

> open "/Users/johnteare/Library/CloudStorage/OneDrive-
> Personal/Documents/Protein BioLabs/Biotech
> Tools/Discovery/Structures/10-2025/20251007/New
> Seq/outputs/25/boltz_results_25/predictions/25/25_model_0.cif"

25_model_0.cif title:  
. [more info...]  
  
Chain information for 25_model_0.cif #1  
---  
Chain | Description  
A | .  
B | .  
  
Color 25_model_0.cif by residue attribute pLDDT_score  
Computing secondary structure  

> show atoms

> hbonds reveal true

304 hydrogen bonds found  

> hbonds reveal true

304 hydrogen bonds found  

> hbonds reveal true

304 hydrogen bonds found  

> select /A:1-238

1812 atoms, 1852 bonds, 201 pseudobonds, 238 residues, 2 models selected  

> show sel surfaces

> close

> open "/Users/johnteare/Library/CloudStorage/OneDrive-
> Personal/Documents/Protein BioLabs/Biotech
> Tools/Discovery/Structures/10-2025/20251007/New
> Seq/outputs/151/boltz_results_151/predictions/151/151_model_0.cif"

151_model_0.cif title:  
. [more info...]  
  
Chain information for 151_model_0.cif #1  
---  
Chain | Description  
A | .  
B | .  
  
Color 151_model_0.cif by residue attribute pLDDT_score  
Computing secondary structure  

> show atoms

> hbonds reveal true

307 hydrogen bonds found  

> select /A:1-238

1812 atoms, 1852 bonds, 196 pseudobonds, 238 residues, 2 models selected  

> show sel surfaces

> hide sel surfaces

> show sel surfaces

> close

> open "/Users/johnteare/Library/CloudStorage/OneDrive-
> Personal/Documents/Protein BioLabs/Biotech
> Tools/Discovery/Structures/10-2025/20251007/New
> Seq/outputs/163/boltz_results_163/predictions/163/163_model_0.cif"

163_model_0.cif title:  
. [more info...]  
  
Chain information for 163_model_0.cif #1  
---  
Chain | Description  
A | .  
B | .  
  
Color 163_model_0.cif by residue attribute pLDDT_score  
Computing secondary structure  

> show atoms

> hbonds reveal true

299 hydrogen bonds found  

> select /A:1-238

1812 atoms, 1852 bonds, 195 pseudobonds, 238 residues, 2 models selected  

> show sel surfaces

> close

> open "/Users/johnteare/Library/CloudStorage/OneDrive-
> Personal/Documents/Protein BioLabs/Biotech
> Tools/Discovery/Structures/10-2025/20251007/New
> Seq/outputs/64/boltz_results_64/predictions/64/64_model_0.cif"

64_model_0.cif title:  
. [more info...]  
  
Chain information for 64_model_0.cif #1  
---  
Chain | Description  
A | .  
B | .  
  
Color 64_model_0.cif by residue attribute pLDDT_score  
Computing secondary structure  

> show atoms

> hbonds reveal true

293 hydrogen bonds found  

> select /A:1-238

1812 atoms, 1852 bonds, 198 pseudobonds, 238 residues, 2 models selected  

> show sel surfaces

> close

> open "/Users/johnteare/Library/CloudStorage/OneDrive-
> Personal/Documents/Protein BioLabs/Biotech
> Tools/Discovery/Structures/10-2025/20251007/New
> Seq/outputs/175/boltz_results_175/predictions/175/175_model_0.cif"

175_model_0.cif title:  
. [more info...]  
  
Chain information for 175_model_0.cif #1  
---  
Chain | Description  
A | .  
B | .  
  
Color 175_model_0.cif by residue attribute pLDDT_score  
Computing secondary structure  

> show atoms

> hbonds reveal true

307 hydrogen bonds found  

> select /A:1-238

1812 atoms, 1852 bonds, 198 pseudobonds, 238 residues, 2 models selected  

> show sel surfaces

> close

> open "/Users/johnteare/Library/CloudStorage/OneDrive-
> Personal/Documents/Protein BioLabs/Biotech
> Tools/Discovery/Structures/10-2025/20251007/New
> Seq/outputs/96/boltz_results_96/predictions/96/96_model_0.cif"

96_model_0.cif title:  
. [more info...]  
  
Chain information for 96_model_0.cif #1  
---  
Chain | Description  
A | .  
B | .  
  
Color 96_model_0.cif by residue attribute pLDDT_score  
Computing secondary structure  

> show atoms

> hbonds reveal true

292 hydrogen bonds found  

> select /A:1-238

1812 atoms, 1852 bonds, 192 pseudobonds, 238 residues, 2 models selected  

> show sel surfaces

> close

> open "/Users/johnteare/Library/CloudStorage/OneDrive-
> Personal/Documents/Protein BioLabs/Biotech
> Tools/Discovery/Structures/10-2025/20251007/New
> Seq/outputs/131/boltz_results_131/predictions/131/131_model_0.cif"

131_model_0.cif title:  
. [more info...]  
  
Chain information for 131_model_0.cif #1  
---  
Chain | Description  
A | .  
B | .  
  
Color 131_model_0.cif by residue attribute pLDDT_score  
Computing secondary structure  

> show atoms

> hbonds reveal true

316 hydrogen bonds found  

> select /A:1-238

1812 atoms, 1852 bonds, 210 pseudobonds, 238 residues, 2 models selected  

> show sel surfaces

> close

> open "/Users/johnteare/Library/CloudStorage/OneDrive-
> Personal/Documents/Protein BioLabs/Biotech
> Tools/Discovery/Structures/10-2025/20251007/New
> Seq/outputs/171/boltz_results_171/predictions/171/171_model_0.cif"

171_model_0.cif title:  
. [more info...]  
  
Chain information for 171_model_0.cif #1  
---  
Chain | Description  
A | .  
B | .  
  
Color 171_model_0.cif by residue attribute pLDDT_score  
Computing secondary structure  

> show atoms

> hbonds reveal true

282 hydrogen bonds found  

> select /A:1-238

1812 atoms, 1852 bonds, 184 pseudobonds, 238 residues, 2 models selected  

> show sel surfaces

> close

> open "/Users/johnteare/Library/CloudStorage/OneDrive-
> Personal/Documents/Protein BioLabs/Biotech
> Tools/Discovery/Structures/10-2025/20251007/New
> Seq/outputs/115/boltz_results_115/predictions/115/115_model_0.cif"

115_model_0.cif title:  
. [more info...]  
  
Chain information for 115_model_0.cif #1  
---  
Chain | Description  
A | .  
B | .  
  
Color 115_model_0.cif by residue attribute pLDDT_score  
Computing secondary structure  

> show atoms

> hbonds reveal true

294 hydrogen bonds found  

> select /A:1-238

1812 atoms, 1852 bonds, 196 pseudobonds, 238 residues, 2 models selected  

> show sel surfaces

> close

> open "/Users/johnteare/Library/CloudStorage/OneDrive-
> Personal/Documents/Protein BioLabs/Biotech
> Tools/Discovery/Structures/10-2025/20251007/New
> Seq/outputs/80/boltz_results_80/predictions/80/80_model_0.cif"

80_model_0.cif title:  
. [more info...]  
  
Chain information for 80_model_0.cif #1  
---  
Chain | Description  
A | .  
B | .  
  
Color 80_model_0.cif by residue attribute pLDDT_score  
Computing secondary structure  

> show atoms

> hbonds reveal true

311 hydrogen bonds found  

> select /A:1-238

1812 atoms, 1852 bonds, 199 pseudobonds, 238 residues, 2 models selected  

> show sel surfaces

> close

> open "/Users/johnteare/Library/CloudStorage/OneDrive-
> Personal/Documents/Protein BioLabs/Biotech
> Tools/Discovery/Structures/10-2025/20251007/New
> Seq/outputs/110/boltz_results_110/predictions/110/110_model_0.cif"

110_model_0.cif title:  
. [more info...]  
  
Chain information for 110_model_0.cif #1  
---  
Chain | Description  
A | .  
B | .  
  
Color 110_model_0.cif by residue attribute pLDDT_score  
Computing secondary structure  

> show atoms

> hbonds reveal true

301 hydrogen bonds found  

> select /A:1-238

1812 atoms, 1852 bonds, 194 pseudobonds, 238 residues, 2 models selected  

> show sel surfaces

> close

> open "/Users/johnteare/Library/CloudStorage/OneDrive-
> Personal/Documents/Protein BioLabs/Biotech
> Tools/Discovery/Structures/10-2025/20251007/New
> Seq/outputs/41/boltz_results_41/predictions/41/41_model_0.cif"

41_model_0.cif title:  
. [more info...]  
  
Chain information for 41_model_0.cif #1  
---  
Chain | Description  
A | .  
B | .  
  
Color 41_model_0.cif by residue attribute pLDDT_score  
Computing secondary structure  

> show atoms

> hbonds reveal true

303 hydrogen bonds found  

> select /A:1-238

1812 atoms, 1852 bonds, 192 pseudobonds, 238 residues, 2 models selected  

> show sel surfaces

> close

> open "/Users/johnteare/Library/CloudStorage/OneDrive-
> Personal/Documents/Protein BioLabs/Biotech
> Tools/Discovery/Structures/10-2025/20251007/New
> Seq/outputs/27/boltz_results_27/predictions/27/27_model_0.cif"

27_model_0.cif title:  
. [more info...]  
  
Chain information for 27_model_0.cif #1  
---  
Chain | Description  
A | .  
B | .  
  
Color 27_model_0.cif by residue attribute pLDDT_score  
Computing secondary structure  

> show atoms

> hbonds reveal true

294 hydrogen bonds found  

> select /A:1-238

1812 atoms, 1852 bonds, 191 pseudobonds, 238 residues, 2 models selected  

> show sel surfaces

> hide sel surfaces

> show sel surfaces

> hide sel surfaces

> show sel surfaces

> hide sel surfaces

> close

> open "/Users/johnteare/Library/CloudStorage/OneDrive-
> Personal/Documents/Protein BioLabs/Biotech
> Tools/Discovery/Structures/10-2025/20251007/New
> Seq/outputs/140/boltz_results_140/predictions/140/140_model_0.cif"

140_model_0.cif title:  
. [more info...]  
  
Chain information for 140_model_0.cif #1  
---  
Chain | Description  
A | .  
B | .  
  
Color 140_model_0.cif by residue attribute pLDDT_score  
Computing secondary structure  

> show atoms

> hbonds reveal true

298 hydrogen bonds found  

> select /A:1-238

1812 atoms, 1852 bonds, 197 pseudobonds, 238 residues, 2 models selected  

> show sel surfaces

> close

> open "/Users/johnteare/Library/CloudStorage/OneDrive-
> Personal/Documents/Protein BioLabs/Biotech
> Tools/Discovery/Structures/10-2025/20251007/New
> Seq/outputs/101/boltz_results_101/predictions/101/101_model_0.cif"

101_model_0.cif title:  
. [more info...]  
  
Chain information for 101_model_0.cif #1  
---  
Chain | Description  
A | .  
B | .  
  
Color 101_model_0.cif by residue attribute pLDDT_score  
Computing secondary structure  

> show atoms

> hbonds reveal true

272 hydrogen bonds found  

> select /A:1-238

1812 atoms, 1852 bonds, 183 pseudobonds, 238 residues, 2 models selected  

> show sel surfaces

> hide sel surfaces

> close

> open "/Users/johnteare/Library/CloudStorage/OneDrive-
> Personal/Documents/Protein BioLabs/Biotech
> Tools/Discovery/Structures/10-2025/20251007/New
> Seq/outputs/24/boltz_results_24/predictions/24/24_model_0.cif"

24_model_0.cif title:  
. [more info...]  
  
Chain information for 24_model_0.cif #1  
---  
Chain | Description  
A | .  
B | .  
  
Color 24_model_0.cif by residue attribute pLDDT_score  
Computing secondary structure  

> show atoms

> hbonds reveal true

291 hydrogen bonds found  

> select /A:1-238

1812 atoms, 1852 bonds, 193 pseudobonds, 238 residues, 2 models selected  

> show sel surfaces

> close

> open "/Users/johnteare/Library/CloudStorage/OneDrive-
> Personal/Documents/Protein BioLabs/Biotech
> Tools/Discovery/Structures/10-2025/20251007/New
> Seq/outputs/153/boltz_results_153/predictions/153/153_model_0.cif"

153_model_0.cif title:  
. [more info...]  
  
Chain information for 153_model_0.cif #1  
---  
Chain | Description  
A | .  
B | .  
  
Color 153_model_0.cif by residue attribute pLDDT_score  
Computing secondary structure  

> show atoms

> hbonds reveal true

287 hydrogen bonds found  

> select /A:1-238

1812 atoms, 1852 bonds, 184 pseudobonds, 238 residues, 2 models selected  

> show sel surfaces

> close

> open "/Users/johnteare/Library/CloudStorage/OneDrive-
> Personal/Documents/Protein BioLabs/Biotech
> Tools/Discovery/Structures/10-2025/20251007/New
> Seq/outputs/20/boltz_results_20/predictions/20/20_model_0.cif"

20_model_0.cif title:  
. [more info...]  
  
Chain information for 20_model_0.cif #1  
---  
Chain | Description  
A | .  
B | .  
  
Color 20_model_0.cif by residue attribute pLDDT_score  
Computing secondary structure  

> show atoms

> hbonds reveal true

287 hydrogen bonds found  

> select /A:1-238

1812 atoms, 1852 bonds, 197 pseudobonds, 238 residues, 2 models selected  

> show sel surfaces

> close

> open "/Users/johnteare/Library/CloudStorage/OneDrive-
> Personal/Documents/Protein BioLabs/Biotech
> Tools/Discovery/Structures/10-2025/20251007/New
> Seq/outputs/156/boltz_results_156/predictions/156/156_model_0.cif"

156_model_0.cif title:  
. [more info...]  
  
Chain information for 156_model_0.cif #1  
---  
Chain | Description  
A | .  
B | .  
  
Color 156_model_0.cif by residue attribute pLDDT_score  
Computing secondary structure  

> show atoms

> hbonds reveal true

290 hydrogen bonds found  

> select /A:1-238

1812 atoms, 1852 bonds, 196 pseudobonds, 238 residues, 2 models selected  

> show sel surfaces

> close

> open "/Users/johnteare/Library/CloudStorage/OneDrive-
> Personal/Documents/Protein BioLabs/Biotech
> Tools/Discovery/Structures/10-2025/20251007/New
> Seq/outputs/71/boltz_results_71/predictions/71/71_model_0.cif"

71_model_0.cif title:  
. [more info...]  
  
Chain information for 71_model_0.cif #1  
---  
Chain | Description  
A | .  
B | .  
  
Color 71_model_0.cif by residue attribute pLDDT_score  
Computing secondary structure  

> show atoms

> hbonds reveal true

285 hydrogen bonds found  

> select /A:1-238

1812 atoms, 1852 bonds, 186 pseudobonds, 238 residues, 2 models selected  

> show sel surfaces

> hide sel surfaces

> close

> open "/Users/johnteare/Library/CloudStorage/OneDrive-
> Personal/Documents/Protein BioLabs/Biotech
> Tools/Discovery/Structures/10-2025/20251007/New
> Seq/outputs/170/boltz_results_170/predictions/170/170_model_0.cif"

170_model_0.cif title:  
. [more info...]  
  
Chain information for 170_model_0.cif #1  
---  
Chain | Description  
A | .  
B | .  
  
Color 170_model_0.cif by residue attribute pLDDT_score  
Computing secondary structure  

> show atoms

> hbonds reveal true

315 hydrogen bonds found  

> select /A:1-238

1812 atoms, 1852 bonds, 200 pseudobonds, 238 residues, 2 models selected  

> show sel surfaces

> hide sel surfaces

> close

> open "/Users/johnteare/Library/CloudStorage/OneDrive-
> Personal/Documents/Protein BioLabs/Biotech
> Tools/Discovery/Structures/10-2025/20251007/New
> Seq/outputs/83/boltz_results_83/predictions/83/83_model_0.cif"

83_model_0.cif title:  
. [more info...]  
  
Chain information for 83_model_0.cif #1  
---  
Chain | Description  
A | .  
B | .  
  
Color 83_model_0.cif by residue attribute pLDDT_score  
Computing secondary structure  

> show atoms

> hbonds reveal true

299 hydrogen bonds found  

> select /A:1-238

1812 atoms, 1852 bonds, 192 pseudobonds, 238 residues, 2 models selected  

> show sel surfaces

> close

> open "/Users/johnteare/Library/CloudStorage/OneDrive-
> Personal/Documents/Protein BioLabs/Biotech
> Tools/Discovery/Structures/10-2025/20251007/New
> Seq/outputs/39/boltz_results_39/predictions/39/39_model_0.cif"

39_model_0.cif title:  
. [more info...]  
  
Chain information for 39_model_0.cif #1  
---  
Chain | Description  
A | .  
B | .  
  
Color 39_model_0.cif by residue attribute pLDDT_score  
Computing secondary structure  

> show atoms

> hbonds reveal true

305 hydrogen bonds found  

> select /A:1-238

1812 atoms, 1852 bonds, 198 pseudobonds, 238 residues, 2 models selected  

> show sel surfaces

> close

> open "/Users/johnteare/Library/CloudStorage/OneDrive-
> Personal/Documents/Protein BioLabs/Biotech
> Tools/Discovery/Structures/10-2025/20251007/New
> Seq/outputs/73/boltz_results_73/predictions/73/73_model_0.cif"

73_model_0.cif title:  
. [more info...]  
  
Chain information for 73_model_0.cif #1  
---  
Chain | Description  
A | .  
B | .  
  
Color 73_model_0.cif by residue attribute pLDDT_score  
Computing secondary structure  

> show atoms

> hbonds reveal true

314 hydrogen bonds found  

> select /A:1-238

1812 atoms, 1852 bonds, 203 pseudobonds, 238 residues, 2 models selected  

> show sel surfaces

> hide sel surfaces

> close

> open "/Users/johnteare/Library/CloudStorage/OneDrive-
> Personal/Documents/Protein BioLabs/Biotech
> Tools/Discovery/Structures/10-2025/20251007/New
> Seq/outputs/81/boltz_results_81/predictions/81/81_model_0.cif"

81_model_0.cif title:  
. [more info...]  
  
Chain information for 81_model_0.cif #1  
---  
Chain | Description  
A | .  
B | .  
  
Color 81_model_0.cif by residue attribute pLDDT_score  
Computing secondary structure  

> show atoms

> hbonds reveal true

311 hydrogen bonds found  

> select /A:1-238

1812 atoms, 1852 bonds, 197 pseudobonds, 238 residues, 2 models selected  

> show sel surfaces

> close

> open "/Users/johnteare/Library/CloudStorage/OneDrive-
> Personal/Documents/Protein BioLabs/Biotech
> Tools/Discovery/Structures/10-2025/20251007/New
> Seq/outputs/81/boltz_results_81/predictions/81/81_model_0.cif" format mmcif

81_model_0.cif title:  
. [more info...]  
  
Chain information for 81_model_0.cif #1  
---  
Chain | Description  
A | .  
B | .  
  
Color 81_model_0.cif by residue attribute pLDDT_score  
Computing secondary structure  

> select /A:1-238

1812 atoms, 1852 bonds, 238 residues, 1 model selected  

> select add #1

2667 atoms, 2724 bonds, 357 residues, 1 model selected  

> show sel atoms

> hbonds sel reveal true

311 hydrogen bonds found  

> select /A:1-238

1812 atoms, 1852 bonds, 197 pseudobonds, 238 residues, 2 models selected  

> show sel surfaces

> close

> open "/Users/johnteare/Library/CloudStorage/OneDrive-
> Personal/Documents/Protein BioLabs/Biotech
> Tools/Discovery/Structures/10-2025/20251007/New
> Seq/outputs/17/boltz_results_17/predictions/17/17_model_0.cif"

17_model_0.cif title:  
. [more info...]  
  
Chain information for 17_model_0.cif #1  
---  
Chain | Description  
A | .  
B | .  
  
Color 17_model_0.cif by residue attribute pLDDT_score  
Computing secondary structure  

> show atoms

> hbonds reveal true

295 hydrogen bonds found  

> select /A:1-238

1812 atoms, 1852 bonds, 198 pseudobonds, 238 residues, 2 models selected  

> show sel surfaces

> close

> open "/Users/johnteare/Library/CloudStorage/OneDrive-
> Personal/Documents/Protein BioLabs/Biotech
> Tools/Discovery/Structures/10-2025/20251007/New
> Seq/outputs/190/boltz_results_190/predictions/190/190_model_0.cif"

190_model_0.cif title:  
. [more info...]  
  
Chain information for 190_model_0.cif #1  
---  
Chain | Description  
A | .  
B | .  
  
Color 190_model_0.cif by residue attribute pLDDT_score  
Computing secondary structure  

> show atoms

> hbonds reveal true

289 hydrogen bonds found  

> select /A:1-238

1812 atoms, 1852 bonds, 203 pseudobonds, 238 residues, 2 models selected  

> show sel surfaces

> close

> open "/Users/johnteare/Library/CloudStorage/OneDrive-
> Personal/Documents/Protein BioLabs/Biotech
> Tools/Discovery/Structures/10-2025/20251007/New
> Seq/outputs/138/boltz_results_138/predictions/138/138_model_0.cif"

138_model_0.cif title:  
. [more info...]  
  
Chain information for 138_model_0.cif #1  
---  
Chain | Description  
A | .  
B | .  
  
Color 138_model_0.cif by residue attribute pLDDT_score  
Computing secondary structure  

> show atoms

> hbonds reveal true

292 hydrogen bonds found  

> select /A:1-238

1812 atoms, 1852 bonds, 198 pseudobonds, 238 residues, 2 models selected  

> show sel surfaces

> close

> open "/Users/johnteare/Library/CloudStorage/OneDrive-
> Personal/Documents/Protein BioLabs/Biotech
> Tools/Discovery/Structures/10-2025/20251007/New
> Seq/outputs/172/boltz_results_172/predictions/172/172_model_0.cif"

172_model_0.cif title:  
. [more info...]  
  
Chain information for 172_model_0.cif #1  
---  
Chain | Description  
A | .  
B | .  
  
Color 172_model_0.cif by residue attribute pLDDT_score  
Computing secondary structure  

> show atoms

> hbonds reveal true

305 hydrogen bonds found  

> select /A:1-238

1812 atoms, 1852 bonds, 199 pseudobonds, 238 residues, 2 models selected  

> show sel surfaces

[Repeated 1 time(s)]

> hide sel surfaces

> close

> open "/Users/johnteare/Library/CloudStorage/OneDrive-
> Personal/Documents/Protein BioLabs/Biotech
> Tools/Discovery/Structures/10-2025/20251007/New
> Seq/outputs/50/boltz_results_50/predictions/50/50_model_0.cif"

50_model_0.cif title:  
. [more info...]  
  
Chain information for 50_model_0.cif #1  
---  
Chain | Description  
A | .  
B | .  
  
Color 50_model_0.cif by residue attribute pLDDT_score  
Computing secondary structure  

> show atoms

> hbonds reveal true

292 hydrogen bonds found  

> select /A:1-238

1812 atoms, 1852 bonds, 194 pseudobonds, 238 residues, 2 models selected  

> show sel surfaces

> close

> open "/Users/johnteare/Library/CloudStorage/OneDrive-
> Personal/Documents/Protein BioLabs/Biotech
> Tools/Discovery/Structures/10-2025/20251007/New
> Seq/outputs/122/boltz_results_122/predictions/122/122_model_0.cif"

122_model_0.cif title:  
. [more info...]  
  
Chain information for 122_model_0.cif #1  
---  
Chain | Description  
A | .  
B | .  
  
Color 122_model_0.cif by residue attribute pLDDT_score  
Computing secondary structure  

> show atoms

> hbonds reveal true

288 hydrogen bonds found  

> select /A:1-238

1812 atoms, 1852 bonds, 192 pseudobonds, 238 residues, 2 models selected  

> show sel surfaces

> close

> open "/Users/johnteare/Library/CloudStorage/OneDrive-
> Personal/Documents/Protein BioLabs/Biotech
> Tools/Discovery/Structures/10-2025/20251007/New
> Seq/outputs/95/boltz_results_95/predictions/95/95_model_0.cif"

95_model_0.cif title:  
. [more info...]  
  
Chain information for 95_model_0.cif #1  
---  
Chain | Description  
A | .  
B | .  
  
Color 95_model_0.cif by residue attribute pLDDT_score  
Computing secondary structure  

> show atoms

> hbonds reveal true

299 hydrogen bonds found  

> select /A:1-238

1812 atoms, 1852 bonds, 204 pseudobonds, 238 residues, 2 models selected  

> show sel surfaces

> close

> open "/Users/johnteare/Library/CloudStorage/OneDrive-
> Personal/Documents/Protein BioLabs/Biotech
> Tools/Discovery/Structures/10-2025/20251007/New
> Seq/outputs/37/boltz_results_37/predictions/37/37_model_0.cif"

37_model_0.cif title:  
. [more info...]  
  
Chain information for 37_model_0.cif #1  
---  
Chain | Description  
A | .  
B | .  
  
Color 37_model_0.cif by residue attribute pLDDT_score  
Computing secondary structure  

> show atoms

> hbonds reveal true

305 hydrogen bonds found  

> select /A:1-238

1812 atoms, 1852 bonds, 199 pseudobonds, 238 residues, 2 models selected  

> show sel surfaces

> hide sel surfaces

> show sel surfaces

> hide sel surfaces

> close

> open "/Users/johnteare/Library/CloudStorage/OneDrive-
> Personal/Documents/Protein BioLabs/Biotech
> Tools/Discovery/Structures/10-2025/20251007/New
> Seq/outputs/103/boltz_results_103/predictions/103/103_model_0.cif"

103_model_0.cif title:  
. [more info...]  
  
Chain information for 103_model_0.cif #1  
---  
Chain | Description  
A | .  
B | .  
  
Color 103_model_0.cif by residue attribute pLDDT_score  
Computing secondary structure  

> show atoms

> hbonds reveal true

297 hydrogen bonds found  

> select /A:1-238

1812 atoms, 1852 bonds, 192 pseudobonds, 238 residues, 2 models selected  

> show sel surfaces

> hide sel surfaces

> close

> open "/Users/johnteare/Library/CloudStorage/OneDrive-
> Personal/Documents/Protein BioLabs/Biotech
> Tools/Discovery/Structures/10-2025/20251007/New
> Seq/outputs/6/boltz_results_6/predictions/6/6_model_0.cif"

6_model_0.cif title:  
. [more info...]  
  
Chain information for 6_model_0.cif #1  
---  
Chain | Description  
A | .  
B | .  
  
Color 6_model_0.cif by residue attribute pLDDT_score  
Computing secondary structure  

> show atoms

> hbonds reveal true

301 hydrogen bonds found  

> select /A:1-238

1812 atoms, 1852 bonds, 197 pseudobonds, 238 residues, 2 models selected  

> show sel surfaces

> close

> open "/Users/johnteare/Library/CloudStorage/OneDrive-
> Personal/Documents/Protein BioLabs/Biotech
> Tools/Discovery/Structures/10-2025/20251007/New
> Seq/outputs/141/boltz_results_141/predictions/141/141_model_0.cif"

141_model_0.cif title:  
. [more info...]  
  
Chain information for 141_model_0.cif #1  
---  
Chain | Description  
A | .  
B | .  
  
Color 141_model_0.cif by residue attribute pLDDT_score  
Computing secondary structure  

> show atoms

> hbonds reveal true

296 hydrogen bonds found  

> select /A:1-238

1812 atoms, 1852 bonds, 197 pseudobonds, 238 residues, 2 models selected  

> show sel surfaces

> close

> open "/Users/johnteare/Library/CloudStorage/OneDrive-
> Personal/Documents/Protein BioLabs/Biotech
> Tools/Discovery/Structures/10-2025/20251007/Seq99_M/outputs/9/boltz_results_9/predictions/9/9_model_0.cif"

9_model_0.cif title:  
. [more info...]  
  
Chain information for 9_model_0.cif #1  
---  
Chain | Description  
A | .  
B | .  
  
Color 9_model_0.cif by residue attribute pLDDT_score  
Computing secondary structure  

> open "/Users/johnteare/Library/CloudStorage/OneDrive-
> Personal/Documents/Protein BioLabs/Biotech
> Tools/Discovery/Structures/10-2025/20251007/Seq99_M/outputs/199/boltz_results_199/predictions/199/199_model_0.cif"

199_model_0.cif title:  
. [more info...]  
  
Chain information for 199_model_0.cif #2  
---  
Chain | Description  
A | .  
B | .  
  
Color 199_model_0.cif by residue attribute pLDDT_score  
Computing secondary structure  

> ui tool show "Similar Structures"

> ui tool show Matchmaker

> matchmaker #2 to #1

Parameters  
---  
Chain pairing | bb  
Alignment algorithm | Needleman-Wunsch  
Similarity matrix | BLOSUM-62  
SS fraction | 0.3  
Gap open (HH/SS/other) | 18/18/6  
Gap extend | 1  
SS matrix |  |  | H | S | O  
---|---|---|---  
H | 6 | -9 | -6  
S |  | 6 | -6  
O |  |  | 4  
Iteration cutoff | 2  
  
Matchmaker 9_model_0.cif, chain A (#1) with 199_model_0.cif, chain A (#2),
sequence alignment score = 1212.5  
RMSD between 225 pruned atom pairs is 0.476 angstroms; (across all 238 pairs:
1.166)  
  

> select #2/B:1-123

931 atoms, 954 bonds, 123 residues, 1 model selected  

> select #2/A:1-238

1812 atoms, 1852 bonds, 238 residues, 1 model selected  

> show sel surfaces

> select #2/B:1-123

931 atoms, 954 bonds, 123 residues, 1 model selected  

> hbonds sel reveal true

147 hydrogen bonds found  

> select ::name="LYS"

495 atoms, 444 bonds, 1 pseudobond, 55 residues, 3 models selected  

> hide sel surfaces

> close

> open "/Users/johnteare/Library/CloudStorage/OneDrive-
> Personal/Documents/Protein BioLabs/Biotech
> Tools/Discovery/Structures/10-2025/20251007/New
> Seq/outputs/160/boltz_results_160/predictions/160/160_model_0.cif"

160_model_0.cif title:  
. [more info...]  
  
Chain information for 160_model_0.cif #1  
---  
Chain | Description  
A | .  
B | .  
  
Color 160_model_0.cif by residue attribute pLDDT_score  
Computing secondary structure  

> show atoms

> hbonds reveal true

295 hydrogen bonds found  

> select /A:1-238

1812 atoms, 1852 bonds, 191 pseudobonds, 238 residues, 2 models selected  

> show sel surfaces

> close

> open "/Users/johnteare/Library/CloudStorage/OneDrive-
> Personal/Documents/Protein BioLabs/Biotech
> Tools/Discovery/Structures/10-2025/20251008/CD3e
> Project/outputs/14/boltz_results_14/predictions/14/14_model_0.cif"

14_model_0.cif title:  
. [more info...]  
  
Chain information for 14_model_0.cif #1  
---  
Chain | Description  
A | .  
B | .  
  
Color 14_model_0.cif by residue attribute pLDDT_score  
Computing secondary structure  

> show atoms

> hbonds reveal true

174 hydrogen bonds found  

> select /A:1-104

821 atoms, 838 bonds, 62 pseudobonds, 104 residues, 2 models selected  
Traceback (most recent call last):  
File
"/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-
packages/chimerax/ui/statusbar.py", line 98, in _expose_event  
self.status(self._last_message, self._last_color)  
File
"/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-
packages/chimerax/ui/statusbar.py", line 164, in status  
r.draw_background()  
File
"/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-
packages/chimerax/graphics/opengl.py", line 1238, in draw_background  
GL.glClear(flags)  
File "src/errorchecker.pyx", line 59, in
OpenGL_accelerate.errorchecker._ErrorChecker.glCheckError  
OpenGL.error.GLError: GLError(  
err = 1286,  
description = b'invalid framebuffer operation',  
baseOperation = glClear,  
cArguments = (16640,)  
)  
  
OpenGL.error.GLError: GLError(  
err = 1286,  
description = b'invalid framebuffer operation',  
baseOperation = glClear,  
cArguments = (16640,)  
)  
  
File "src/errorchecker.pyx", line 59, in
OpenGL_accelerate.errorchecker._ErrorChecker.glCheckError  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File
"/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-
packages/chimerax/ui/statusbar.py", line 98, in _expose_event  
self.status(self._last_message, self._last_color)  
File
"/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-
packages/chimerax/ui/statusbar.py", line 164, in status  
r.draw_background()  
File
"/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-
packages/chimerax/graphics/opengl.py", line 1238, in draw_background  
GL.glClear(flags)  
File "src/errorchecker.pyx", line 59, in
OpenGL_accelerate.errorchecker._ErrorChecker.glCheckError  
OpenGL.error.GLError: GLError(  
err = 1286,  
description = b'invalid framebuffer operation',  
baseOperation = glClear,  
cArguments = (16640,)  
)  
  
OpenGL.error.GLError: GLError(  
err = 1286,  
description = b'invalid framebuffer operation',  
baseOperation = glClear,  
cArguments = (16640,)  
)  
  
File "src/errorchecker.pyx", line 59, in
OpenGL_accelerate.errorchecker._ErrorChecker.glCheckError  
  
See log for complete Python traceback.  
  




OpenGL version: 4.1 Metal - 90.5
OpenGL renderer: Apple M3 Max
OpenGL vendor: Apple

Python: 3.11.4
Locale: en_US.UTF-8
Qt version: PyQt6 6.8.1, Qt 6.8.2
Qt runtime version: 6.8.2
Qt platform: cocoa
Hardware:

    Hardware Overview:

      Model Name: MacBook Pro
      Model Identifier: Mac15,10
      Model Number: MRX53LL/A
      Chip: Apple M3 Max
      Total Number of Cores: 14 (10 performance and 4 efficiency)
      Memory: 36 GB
      System Firmware Version: 13822.1.2
      OS Loader Version: 13822.1.2

Software:

    System Software Overview:

      System Version: macOS 26.0.1 (25A362)
      Kernel Version: Darwin 25.0.0
      Time since boot: 8 hours, 9 minutes

Graphics/Displays:

    Apple M3 Max:

      Chipset Model: Apple M3 Max
      Type: GPU
      Bus: Built-In
      Total Number of Cores: 30
      Vendor: Apple (0x106b)
      Metal Support: Metal 4
      Displays:
        Color LCD:
          Display Type: Built-in Liquid Retina XDR Display
          Resolution: 3024 x 1964 Retina
          Main Display: Yes
          Mirror: Off
          Online: Yes
          Automatically Adjust Brightness: Yes
          Connection Type: Internal


Installed Packages:
    alabaster: 1.0.0
    appdirs: 1.4.4
    appnope: 0.1.4
    asttokens: 3.0.0
    auditwheel: 6.4.0
    babel: 2.17.0
    beautifulsoup4: 4.13.3
    blockdiag: 3.0.0
    blosc2: 3.5.0
    build: 1.2.2.post1
    certifi: 2023.11.17
    cftime: 1.6.4.post1
    charset-normalizer: 3.4.2
    ChimeraX-AddCharge: 1.5.19
    ChimeraX-AddH: 2.2.7
    ChimeraX-AlignmentAlgorithms: 2.0.2
    ChimeraX-AlignmentHdrs: 3.6.1
    ChimeraX-AlignmentMatrices: 2.1
    ChimeraX-Alignments: 2.20.2
    ChimeraX-AlphaFold: 1.0.1
    ChimeraX-AltlocExplorer: 1.1.2
    ChimeraX-AmberInfo: 1.0
    ChimeraX-Aniso: 1.1.4
    ChimeraX-Arrays: 1.1
    ChimeraX-Atomic: 1.60.7
    ChimeraX-AtomicLibrary: 14.1.18
    ChimeraX-AtomSearch: 2.0.1
    ChimeraX-AxesPlanes: 2.4
    ChimeraX-BasicActions: 1.1.3
    ChimeraX-BILD: 1.0
    ChimeraX-BlastProtein: 3.0.0
    ChimeraX-Boltz: 1.0
    ChimeraX-BondRot: 2.0.4
    ChimeraX-BugReporter: 1.0.2
    ChimeraX-BuildStructure: 2.13.1
    ChimeraX-Bumps: 1.0
    ChimeraX-BundleBuilder: 1.5.1
    ChimeraX-ButtonPanel: 1.0.1
    ChimeraX-CageBuilder: 1.0.1
    ChimeraX-CellPack: 1.0
    ChimeraX-Centroids: 1.4
    ChimeraX-ChangeChains: 1.1
    ChimeraX-CheckWaters: 1.5
    ChimeraX-ChemGroup: 2.0.2
    ChimeraX-Clashes: 2.3
    ChimeraX-ColorActions: 1.0.5
    ChimeraX-ColorGlobe: 1.0
    ChimeraX-ColorKey: 1.5.8
    ChimeraX-CommandLine: 1.3
    ChimeraX-ConnectStructure: 2.0.1
    ChimeraX-Contacts: 1.0.1
    ChimeraX-Core: 1.10
    ChimeraX-CoreFormats: 1.2
    ChimeraX-coulombic: 1.4.5
    ChimeraX-Crosslinks: 1.0
    ChimeraX-Crystal: 1.0
    ChimeraX-CrystalContacts: 1.0.1
    ChimeraX-DataFormats: 1.2.4
    ChimeraX-Dicom: 1.2.7
    ChimeraX-DistMonitor: 1.4.2
    ChimeraX-DockPrep: 1.1.4
    ChimeraX-Dssp: 2.0
    ChimeraX-EMDB-SFF: 1.0
    ChimeraX-ESMFold: 1.0
    ChimeraX-FileHistory: 1.0.1
    ChimeraX-FunctionKey: 1.0.1
    ChimeraX-Geometry: 1.3
    ChimeraX-gltf: 1.0
    ChimeraX-Graphics: 1.4.1
    ChimeraX-Hbonds: 2.5.1
    ChimeraX-Help: 1.3
    ChimeraX-HKCage: 1.3
    ChimeraX-IHM: 1.1
    ChimeraX-ImageFormats: 1.2
    ChimeraX-IMOD: 1.0
    ChimeraX-IO: 1.0.3
    ChimeraX-ItemsInspection: 1.0.1
    ChimeraX-IUPAC: 1.0
    ChimeraX-KVFinder: 1.6.2
    ChimeraX-Label: 1.1.14
    ChimeraX-ListInfo: 1.2.2
    ChimeraX-Log: 1.2
    ChimeraX-LookingGlass: 1.1
    ChimeraX-Maestro: 1.9.1
    ChimeraX-Map: 1.3
    ChimeraX-MapData: 2.0
    ChimeraX-MapEraser: 1.0.1
    ChimeraX-MapFilter: 2.0.1
    ChimeraX-MapFit: 2.0
    ChimeraX-MapSeries: 2.1.1
    ChimeraX-Markers: 1.0.1
    ChimeraX-Mask: 1.0.2
    ChimeraX-MatchMaker: 2.2.2
    ChimeraX-MCopy: 1.0
    ChimeraX-MDcrds: 2.10.1
    ChimeraX-MedicalToolbar: 1.1
    ChimeraX-Meeting: 1.0.1
    ChimeraX-MLP: 1.1.1
    ChimeraX-mmCIF: 2.16
    ChimeraX-MMTF: 2.2
    ChimeraX-ModelArchive: 1.0
    ChimeraX-Modeller: 1.5.19
    ChimeraX-ModelPanel: 1.5.1
    ChimeraX-ModelSeries: 1.0.1
    ChimeraX-Mol2: 2.0.3
    ChimeraX-Mole: 1.0
    ChimeraX-Morph: 1.0.2
    ChimeraX-MouseModes: 1.2
    ChimeraX-Movie: 1.0
    ChimeraX-MutationScores: 1.0
    ChimeraX-Neuron: 1.0
    ChimeraX-Nifti: 1.2
    ChimeraX-NMRSTAR: 1.0.2
    ChimeraX-NRRD: 1.2
    ChimeraX-Nucleotides: 2.0.3
    ChimeraX-OpenCommand: 1.14.1
    ChimeraX-OrthoPick: 1.0.1
    ChimeraX-PDB: 2.7.10
    ChimeraX-PDBBio: 1.0.1
    ChimeraX-PDBLibrary: 1.0.4
    ChimeraX-PDBMatrices: 1.0
    ChimeraX-PickBlobs: 1.0.1
    ChimeraX-Positions: 1.0
    ChimeraX-PresetMgr: 1.1.3
    ChimeraX-ProfileGrids: 1.1.2
    ChimeraX-PubChem: 2.2
    ChimeraX-ReadPbonds: 1.0.1
    ChimeraX-Registration: 1.1.2
    ChimeraX-RemoteControl: 1.0
    ChimeraX-RenderByAttr: 1.6.3
    ChimeraX-RenumberResidues: 1.1
    ChimeraX-ResidueFit: 1.0.1
    ChimeraX-RestServer: 1.3.1
    ChimeraX-RNALayout: 1.0
    ChimeraX-RotamerLibMgr: 4.0
    ChimeraX-RotamerLibsDunbrack: 2.0
    ChimeraX-RotamerLibsDynameomics: 2.0
    ChimeraX-RotamerLibsRichardson: 2.0
    ChimeraX-SaveCommand: 1.5.1
    ChimeraX-SchemeMgr: 1.0
    ChimeraX-SDF: 2.0.3
    ChimeraX-Segger: 1.0
    ChimeraX-Segment: 1.0.1
    ChimeraX-Segmentations: 3.5.7
    ChimeraX-SelInspector: 1.0
    ChimeraX-SeqView: 2.17.1
    ChimeraX-Shape: 1.1
    ChimeraX-Shell: 1.0.1
    ChimeraX-Shortcuts: 1.2.1
    ChimeraX-ShowSequences: 1.0.3
    ChimeraX-SideView: 1.0.1
    ChimeraX-SimilarStructures: 1.0.1
    ChimeraX-Smiles: 2.1.2
    ChimeraX-SmoothLines: 1.0
    ChimeraX-SpaceNavigator: 1.0
    ChimeraX-StdCommands: 1.19.1
    ChimeraX-STL: 1.0.1
    ChimeraX-Storm: 1.0
    ChimeraX-StructMeasure: 1.2.1
    ChimeraX-Struts: 1.0.1
    ChimeraX-Surface: 1.0.1
    ChimeraX-SwapAA: 2.0.1
    ChimeraX-SwapRes: 2.5.2
    ChimeraX-TapeMeasure: 1.0
    ChimeraX-TaskManager: 1.0
    ChimeraX-Test: 1.0
    ChimeraX-Toolbar: 1.2.3
    ChimeraX-ToolshedUtils: 1.2.4
    ChimeraX-Topography: 1.0
    ChimeraX-ToQuest: 1.0
    ChimeraX-Tug: 1.0.1
    ChimeraX-UI: 1.45.2
    ChimeraX-Umap: 1.0
    ChimeraX-uniprot: 2.3.1
    ChimeraX-UnitCell: 1.0.1
    ChimeraX-ViewDockX: 1.4.4
    ChimeraX-VIPERdb: 1.0
    ChimeraX-Vive: 1.1
    ChimeraX-VolumeMenu: 1.0.1
    ChimeraX-vrml: 1.0
    ChimeraX-VTK: 1.0
    ChimeraX-WavefrontOBJ: 1.0
    ChimeraX-WebCam: 1.0.2
    ChimeraX-WebServices: 1.1.5
    ChimeraX-Zone: 1.0.1
    colorama: 0.4.6
    comm: 0.2.2
    contourpy: 1.3.2
    coverage: 7.9.1
    cxservices: 1.2.3
    cycler: 0.12.1
    Cython: 3.0.12
    debugpy: 1.8.14
    decorator: 5.2.1
    docutils: 0.21.2
    executing: 2.2.0
    filelock: 3.18.0
    fonttools: 4.58.4
    funcparserlib: 2.0.0a0
    glfw: 2.9.0
    grako: 3.16.5
    h5py: 3.14.0
    html2text: 2024.2.26
    idna: 3.10
    ihm: 2.2
    imagecodecs: 2024.6.1
    imagesize: 1.4.1
    iniconfig: 2.1.0
    ipykernel: 6.29.5
    ipython: 8.26.0
    ipywidgets: 8.1.7
    jedi: 0.19.1
    Jinja2: 3.1.6
    jupyter_client: 8.6.3
    jupyter_core: 5.8.1
    jupyterlab_widgets: 3.0.15
    kiwisolver: 1.4.8
    line_profiler: 4.2.0
    lxml: 5.3.1
    lz4: 4.4.4
    MarkupSafe: 3.0.2
    matplotlib: 3.10.1
    matplotlib-inline: 0.1.7
    msgpack: 1.1.0
    narwhals: 2.3.0
    ndindex: 1.10.0
    nest-asyncio: 1.6.0
    netCDF4: 1.6.5
    networkx: 3.3
    nibabel: 5.2.0
    nptyping: 2.5.0
    numexpr: 2.11.0
    numpy: 2.2.6
    numpy: 1.26.4
    OpenMM: 8.2.0
    openvr: 1.26.701
    packaging: 24.2
    ParmEd: 4.2.2
    parso: 0.8.4
    pep517: 0.13.1
    pexpect: 4.9.0
    pickleshare: 0.7.5
    pillow: 10.4.0
    pip: 25.0.1
    pkginfo: 1.11.1
    platformdirs: 4.3.8
    plotly: 6.0.1
    pluggy: 1.6.0
    prompt_toolkit: 3.0.51
    psutil: 7.0.0
    ptyprocess: 0.7.0
    pure_eval: 0.2.3
    py-cpuinfo: 9.0.0
    pycollada: 0.8
    pydicom: 2.4.4
    pyelftools: 0.32
    Pygments: 2.18.0
    pyKVFinder: 0.8.1
    pynmrstar: 3.3.5
    pynrrd: 1.0.0
    PyOpenGL: 3.1.9
    PyOpenGL-accelerate: 3.1.9
    pyopenxr: 1.1.4501
    pyparsing: 3.2.3
    pyproject_hooks: 1.2.0
    PyQt6-commercial: 6.8.1
    PyQt6-Qt6: 6.8.2
    PyQt6-WebEngine-commercial: 6.8.0
    PyQt6-WebEngine-Qt6: 6.8.2
    PyQt6_sip: 13.10.0
    pytest: 8.4.1
    pytest-cov: 6.2.1
    python-dateutil: 2.9.0.post0
    pytz: 2025.2
    pyzmq: 27.0.0
    qtconsole: 5.5.2
    QtPy: 2.4.3
    qtshim: 1.1
    RandomWords: 0.4.0
    requests: 2.32.3
    roman-numerals-py: 3.1.0
    scipy: 1.14.0
    setuptools: 78.1.0
    sfftk-rw: 0.8.1
    six: 1.16.0
    snowballstemmer: 3.0.1
    sortedcontainers: 2.4.0
    soupsieve: 2.7
    Sphinx: 8.2.3
    sphinx-autodoc-typehints: 3.1.0
    sphinxcontrib-applehelp: 2.0.0
    sphinxcontrib-blockdiag: 3.0.0
    sphinxcontrib-devhelp: 2.0.0
    sphinxcontrib-htmlhelp: 2.1.0
    sphinxcontrib-jsmath: 1.0.1
    sphinxcontrib-qthelp: 2.0.0
    sphinxcontrib-serializinghtml: 2.0.0
    stack-data: 0.6.3
    superqt: 0.7.1
    tables: 3.10.2
    tcia_utils: 1.5.1
    tifffile: 2025.3.13
    tinyarray: 1.2.4
    tomlkit: 0.13.2
    tornado: 6.5.1
    traitlets: 5.14.3
    typing_extensions: 4.14.0
    tzdata: 2025.2
    urllib3: 2.5.0
    wcwidth: 0.2.13
    webcolors: 24.11.1
    wheel: 0.45.1
    wheel-filename: 1.4.2
    widgetsnbextension: 4.0.14

Change History (2)

comment:1 by Eric Pettersen, 4 weeks ago

Component: Unassigned → Graphics
Owner: set to Tom Goddard
Platform: → all
Project: → ChimeraX
Status: new → assigned
Summary: ChimeraX bug report submission → glClear: invalid framebuffer operation

comment:2 by Tom Goddard, 4 weeks ago

Resolution: → can't reproduce
Status: assigned → closed

A ticket from yesterday showed a crash with expose event for status line in OpenGL swap buffers where the expose event was dispatched from QOpenGLContext.makeCurrent() starting rendering the side view. My only guess is that this error is the same problem of the expose event being dispatched from an unexpected Qt call. That would be a Qt bug.

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