Opened 2 weeks ago
Closed 2 weeks ago
#19011 closed defect (duplicate)
'NoneType' object has no attribute 'image_colors'
Reported by: | Owned by: | Zach Pearson | |
---|---|---|---|
Priority: | normal | Milestone: | |
Component: | DICOM | Version: | |
Keywords: | Cc: | ||
Blocked By: | Blocking: | ||
Notify when closed: | Platform: | all | |
Project: | ChimeraX |
Description
The following bug report has been submitted: Platform: macOS-15.6.1-x86_64-i386-64bit ChimeraX Version: 1.10 (2025-06-26 08:57:52 UTC) Description Replace this text with list of actions that caused this problem to occur Log: UCSF ChimeraX version: 1.10 (2025-06-26) © 2016-2025 Regents of the University of California. All rights reserved. How to cite UCSF ChimeraX > open /Users/mmannhei/Downloads/cryosparc_P5_J829_003_volume_map.mrc Opened cryosparc_P5_J829_003_volume_map.mrc as #1, grid size 460,460,460, pixel 0.75, shown at level 0.00937, step 2, values float32 > open /Users/mmannhei/Downloads/cryosparc_P5_J830_map_locres.mrc Opened cryosparc_P5_J830_map_locres.mrc as #2, grid size 460,460,460, pixel 0.75, shown at level 6.15, step 2, values float32 > open /Users/mmannhei/Downloads/cryosparc_P5_J831_map_sharp.mrc Opened cryosparc_P5_J831_map_sharp.mrc as #3, grid size 460,460,460, pixel 0.75, shown at level 7.81e-05, step 2, values float32 > open /Users/mmannhei/Downloads/cryosparc_P5_J832_005_volume_map.mrc Opened cryosparc_P5_J832_005_volume_map.mrc as #4, grid size 460,460,460, pixel 0.75, shown at level 0.00873, step 2, values float32 > open /Users/mmannhei/Downloads/cryosparc_P5_J833_map_locres.mrc Opened cryosparc_P5_J833_map_locres.mrc as #5, grid size 460,460,460, pixel 0.75, shown at level 5.26, step 2, values float32 > open /Users/mmannhei/Downloads/cryosparc_P5_J834_map_sharp.mrc Opened cryosparc_P5_J834_map_sharp.mrc as #6, grid size 460,460,460, pixel 0.75, shown at level 0.000167, step 2, values float32 > ui tool show "Surface Color" > hide #!1 models > show #!1 models > color sample #1.1 map #2 palette 2,#0433ff:3,#00f900:4,#ff2600 outsideColor > #808080 Map values for surface "surface": minimum 0, mean 3.606, maximum 38.35 > hide #!2 models > hide #!3 models > hide #!4 models > hide #!5 models > hide #!6 models > color single #1.1 > color sample #1.1 map #2 palette 2,#0433ff:3,#00f900:4,#ff2600 outsideColor > #808080 Map values for surface "surface": minimum 0, mean 3.606, maximum 38.35 > volume #1 level 0.03208 > volume #1 level 0.02517 > color sample #3.1 map #2 palette 2,#0433ff:3,#00f900:4,#ff2600 outsideColor > #808080 Map values for surface "surface": minimum 0, mean 3.201, maximum 32.05 > hide #!1 models > show #!3 models > volume #3 level 0.009089 > volume #3 level 0.08418 > show #!1 models > hide #!1 models > show #!2 models > hide #!2 models > show #!1 models > hide #!1 models > show #!1 models > show #!2 models > hide #!1 models > hide #!2 models > hide #!3 models > show #!4 models > color sample #4.1 map #5 palette 2,#0433ff:3,#00f900:4,#ff2600 outsideColor > #808080 Map values for surface "surface": minimum 0, mean 3.12, maximum 28.35 > volume #4 level 0.007244 > volume #4 level 0.02356 > show #!1 models > hide #!1 models > show #!1 models > hide #!1 models > show #!1 models > hide #!1 models > show #!1 models > hide #!1 models > show #!1 models > hide #!1 models > show #!1 models > hide #!1 models > volume #1 level 0.025 > volume #4 level 0.025 > show #!1 models > hide #!1 models > show #!1 models > hide #!1 models > show #!1 models > hide #!1 models > show #!1 models > hide #!1 models > hide #!4 models > show #!1 models > hide #!1 models > show #!4 models > hide #!4 models > color sample #6.1 map #5 palette 2,#0433ff:3,#00f900:4,#ff2600 outsideColor > #808080 Map values for surface "surface": minimum 0, mean 2.826, maximum 9.719 > show #!6 models > volume #6 level 0.04597 > hide #!6 models > show #!1 models > volume #1 level 0.02855 > volume gaussian #1 sDev 2 Opened cryosparc_P5_J829_003_volume_map.mrc gaussian as #7, grid size 460,460,460, pixel 0.75, shown at step 1, values float32 > show #!1 models > hide #!7 models > volume #1 level 0.02348 > volume #1 level 0.02652 > hide #!1 models > show #!7 models > ui tool show Segmentations Created segmentation sphere cursor with ID #8 Created segmentation sphere cursor with ID #9 Created segmentation sphere cursor with ID #10 > ui view fourup > segmentations create #7 Opened segmentation 1 of cryosparc_P5_J829_003_volume_map.mrc gaussian as #11, grid size 460,460,460, pixel 0.75, shown at level 0.501, step 1, values float64 > ui tool show Segmentations > undo [Repeated 1 time(s)] > close #8 > close #9 > close #10 > ui view Missing or invalid "layout" argument: Expected one of 'default', 'fourup', 'overunder', or 'sidebyside' > ui view default > hide #!1 models > show #!1 models > close #11 > hide #!1 models > show #!7 models > show #!1 models > hide #!7 models > volume #1 level 0.02753 > show #!7 models > hide #!1 models > ui tool show "Segment Map" Segmenting cryosparc_P5_J829_003_volume_map.mrc gaussian, density threshold 0.012928 Only showing 60 of 130 regions. Showing 60 of 130 region surfaces 589 watershed regions, grouped to 130 regions Showing cryosparc_P5_J829_003_volume_map gaussian.seg - 130 regions, 60 surfaces > select #8.9 1 model selected Drag select of 852, 12624 of 28916 triangles, 875, 30980 of 32288 triangles, 866, 12640 of 26736 triangles, 844, 16770 of 24016 triangles, 863, 17611 of 21352 triangles, 845, 11158 of 20548 triangles, 854, 13573 of 23288 triangles, 836, 10599 of 21740 triangles, 677, 13168 of 15916 triangles, 880, 16817 of 17760 triangles, 887, 6073 of 16972 triangles, 834, 6838 of 18940 triangles, 824, 7 cryosparc_P5_J829_003_volume_map.mrc gaussian > select clear Drag select of 852, 12045 of 28916 triangles, 875, 31897 of 32288 triangles, 866, 225 of 26736 triangles, 844, 12108 of 24016 triangles, 863, 19479 of 21352 triangles, 845, 5186 of 20548 triangles, 854, 2548 of 23288 triangles, 836, 12326 of 21740 triangles, 677, 14007 of 15916 triangles, 880, 17566 of 17760 triangles, 834, 8776 of 18940 triangles, 824, 6754 of 17740 triangles, 7 cryosparc_P5_J829_003_volume_map.mrc gaussian > select #7 2 models selected > select #7 2 models selected > select #8.15 1 model selected > select add #8.36 2 models selected > select add #8.37 3 models selected > select add #8.3 4 models selected > select add #8.9 5 models selected > hide #!7 models > select subtract #7 5 models selected > show #!7 models > hide #!7 models > show #!7 models > hide #!7 models > close #8 Segmenting cryosparc_P5_J829_003_volume_map.mrc gaussian, density threshold 0.012928 Only showing 60 of 130 regions. Showing 60 of 130 region surfaces 589 watershed regions, grouped to 130 regions Showing cryosparc_P5_J829_003_volume_map gaussian.seg - 130 regions, 60 surfaces > close #8 Segmenting cryosparc_P5_J829_003_volume_map.mrc gaussian, density threshold 0.012928 Only showing 80 of 130 regions. Showing 80 of 130 region surfaces 589 watershed regions, grouped to 130 regions Showing cryosparc_P5_J829_003_volume_map gaussian.seg - 130 regions, 80 surfaces > close #8 Segmenting cryosparc_P5_J829_003_volume_map.mrc gaussian, density threshold 0.012928 Only showing 120 of 130 regions. Showing 120 of 130 region surfaces 589 watershed regions, grouped to 130 regions Showing cryosparc_P5_J829_003_volume_map gaussian.seg - 130 regions, 120 surfaces > close #8 Segmenting cryosparc_P5_J829_003_volume_map.mrc gaussian, density threshold 0.012928 Only showing 130 of 130 regions. Showing 130 region surfaces 589 watershed regions, grouped to 130 regions Showing cryosparc_P5_J829_003_volume_map gaussian.seg - 130 regions, 130 surfaces Drag select of 853, 23047 of 28916 triangles, 863, 31722 of 32288 triangles, 872, 22620 of 26736 triangles, 814, 17563 of 24016 triangles, 886, 835, 17510 of 20548 triangles, 873, 18417 of 23288 triangles, 811, 15691 of 21740 triangles, 605, 12949 of 15916 triangles, 864, 887, 5331 of 16972 triangles, 820, 9705 of 18940 triangles, 833, 650, 1838 of 10892 triangles, 749, 5361 of 10108 triangles, 838, 408, 688, 6066 of 7036 triangles, 453, 418, 4625 of 5836 triangles, 407 Grouped 21 regions Grouped 109 regions > undo Showing 2 region surfaces Saving 1 regions to mrc file... Opened J829.mrc as #9, grid size 104,71,125, pixel 0.75, shown at step 1, values float32 Wrote J829.mrc > select #9 2 models selected > hide #!9 models Saving 2 regions to mrc file... Opened J829_inv.mrc as #10, grid size 188,188,238, pixel 0.75, shown at step 1, values float32 Wrote J829_inv.mrc > select subtract #9 2 models selected > select add #8 3 models selected > select subtract #8 Nothing selected > hide #!10 models > show #!10 models > hide #!10 models > show #!9 models > hide #!9 models > show #!10 models > close #10 Showing 2 region surfaces > select #8.1 1 model selected > select #8.2 1 model selected > select #8.1 1 model selected Saving 1 regions to mrc file... Opened J829_inv.mrc as #10, grid size 188,148,238, pixel 0.75, shown at step 1, values float32 Wrote J829_inv.mrc > hide #!10 models > hide #!8 models > select add #8 3 models selected > select subtract #8 Nothing selected > show #!9 models > show #!10 models Traceback (most recent call last): File "/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site- packages/chimerax/map/volume_viewer.py", line 2178, in mouseMoveEvent self._drag(event) File "/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site- packages/chimerax/map/volume_viewer.py", line 2182, in _drag cb(event) File "/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site- packages/chimerax/map/histogram.py", line 416, in move_marker_cb cb(m) File "/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site- packages/chimerax/segmentations/ui/orthoplanes.py", line 1931, in moved_marker_cb self.plane_viewer.on_color_changed() File "/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site- packages/chimerax/segmentations/ui/orthoplanes.py", line 754, in on_color_changed colors = self.view.drawing.parent.image_colors ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ AttributeError: 'NoneType' object has no attribute 'image_colors' AttributeError: 'NoneType' object has no attribute 'image_colors' File "/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site- packages/chimerax/segmentations/ui/orthoplanes.py", line 754, in on_color_changed colors = self.view.drawing.parent.image_colors ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ See log for complete Python traceback. Traceback (most recent call last): File "/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site- packages/chimerax/map/volume_viewer.py", line 2178, in mouseMoveEvent self._drag(event) File "/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site- packages/chimerax/map/volume_viewer.py", line 2182, in _drag cb(event) File "/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site- packages/chimerax/map/histogram.py", line 416, in move_marker_cb cb(m) File "/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site- packages/chimerax/segmentations/ui/orthoplanes.py", line 1931, in moved_marker_cb self.plane_viewer.on_color_changed() File "/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site- packages/chimerax/segmentations/ui/orthoplanes.py", line 754, in on_color_changed colors = self.view.drawing.parent.image_colors ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ AttributeError: 'NoneType' object has no attribute 'image_colors' AttributeError: 'NoneType' object has no attribute 'image_colors' File "/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site- packages/chimerax/segmentations/ui/orthoplanes.py", line 754, in on_color_changed colors = self.view.drawing.parent.image_colors ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ See log for complete Python traceback. OpenGL version: 4.1 ATI-7.0.23 OpenGL renderer: AMD Radeon Pro 5700 XT OpenGL Engine OpenGL vendor: ATI Technologies Inc. Python: 3.11.4 Locale: en_US.UTF-8 Qt version: PyQt6 6.8.1, Qt 6.8.2 Qt runtime version: 6.8.2 Qt platform: cocoa Hardware: Hardware Overview: Model Name: iMac Model Identifier: iMac20,2 Processor Name: 10-Core Intel Core i9 Processor Speed: 3.6 GHz Number of Processors: 1 Total Number of Cores: 10 L2 Cache (per Core): 256 KB L3 Cache: 20 MB Hyper-Threading Technology: Enabled Memory: 32 GB System Firmware Version: 2075.140.4.0.0 (iBridge: 22.16.16083.0.0,0) OS Loader Version: 583~2210 Software: System Software Overview: System Version: macOS 15.6.1 (24G90) Kernel Version: Darwin 24.6.0 Time since boot: 42 days, 4 hours, 16 minutes Graphics/Displays: AMD Radeon Pro 5700 XT: Chipset Model: AMD Radeon Pro 5700 XT Type: GPU Bus: PCIe PCIe Lane Width: x16 VRAM (Total): 16 GB Vendor: AMD (0x1002) Device ID: 0x7319 Revision ID: 0x0040 ROM Revision: 113-D1820Q-231 VBIOS Version: 113-D182A2XT-013 Option ROM Version: 113-D182A2XT-013 EFI Driver Version: 01.01.231 Metal Support: Metal 3 Displays: iMac: Display Type: Built-In Retina LCD Resolution: Retina 5K (5120 x 2880) Framebuffer Depth: 30-Bit Color (ARGB2101010) Main Display: Yes Mirror: Off Online: Yes Automatically Adjust Brightness: Yes Connection Type: Internal DELL P2423D: Resolution: 1440 x 2560 UI Looks like: 1440 x 2560 @ 60.00Hz Framebuffer Depth: 30-Bit Color (ARGB2101010) Display Serial Number: BG4RVP3 Mirror: Off Online: Yes Rotation: 270 Connection Type: DVI or HDMI Adapter Firmware Version: 7.55 Installed Packages: alabaster: 1.0.0 appdirs: 1.4.4 appnope: 0.1.4 asttokens: 3.0.0 auditwheel: 6.4.0 babel: 2.17.0 beautifulsoup4: 4.13.3 blockdiag: 3.0.0 blosc2: 3.5.0 build: 1.2.2.post1 certifi: 2023.11.17 cftime: 1.6.4.post1 charset-normalizer: 3.4.2 ChimeraX-AddCharge: 1.5.19 ChimeraX-AddH: 2.2.7 ChimeraX-AlignmentAlgorithms: 2.0.2 ChimeraX-AlignmentHdrs: 3.6.1 ChimeraX-AlignmentMatrices: 2.1 ChimeraX-Alignments: 2.20.2 ChimeraX-AlphaFold: 1.0.1 ChimeraX-AltlocExplorer: 1.1.2 ChimeraX-AmberInfo: 1.0 ChimeraX-Aniso: 1.1.4 ChimeraX-Arrays: 1.1 ChimeraX-Atomic: 1.60.7 ChimeraX-AtomicLibrary: 14.1.18 ChimeraX-AtomSearch: 2.0.1 ChimeraX-AxesPlanes: 2.4 ChimeraX-BasicActions: 1.1.3 ChimeraX-BILD: 1.0 ChimeraX-BlastProtein: 3.0.0 ChimeraX-Boltz: 1.0 ChimeraX-BondRot: 2.0.4 ChimeraX-BugReporter: 1.0.2 ChimeraX-BuildStructure: 2.13.1 ChimeraX-Bumps: 1.0 ChimeraX-BundleBuilder: 1.5.1 ChimeraX-ButtonPanel: 1.0.1 ChimeraX-CageBuilder: 1.0.1 ChimeraX-CellPack: 1.0 ChimeraX-Centroids: 1.4 ChimeraX-ChangeChains: 1.1 ChimeraX-CheckWaters: 1.5 ChimeraX-ChemGroup: 2.0.2 ChimeraX-Clashes: 2.3 ChimeraX-ColorActions: 1.0.5 ChimeraX-ColorGlobe: 1.0 ChimeraX-ColorKey: 1.5.8 ChimeraX-CommandLine: 1.3 ChimeraX-ConnectStructure: 2.0.1 ChimeraX-Contacts: 1.0.1 ChimeraX-Core: 1.10 ChimeraX-CoreFormats: 1.2 ChimeraX-coulombic: 1.4.5 ChimeraX-Crosslinks: 1.0 ChimeraX-Crystal: 1.0 ChimeraX-CrystalContacts: 1.0.1 ChimeraX-DataFormats: 1.2.4 ChimeraX-Dicom: 1.2.7 ChimeraX-DistMonitor: 1.4.2 ChimeraX-DockPrep: 1.1.4 ChimeraX-Dssp: 2.0 ChimeraX-EMDB-SFF: 1.0 ChimeraX-ESMFold: 1.0 ChimeraX-FileHistory: 1.0.1 ChimeraX-FunctionKey: 1.0.1 ChimeraX-Geometry: 1.3 ChimeraX-gltf: 1.0 ChimeraX-Graphics: 1.4.1 ChimeraX-Hbonds: 2.5.1 ChimeraX-Help: 1.3 ChimeraX-HKCage: 1.3 ChimeraX-IHM: 1.1 ChimeraX-ImageFormats: 1.2 ChimeraX-IMOD: 1.0 ChimeraX-IO: 1.0.3 ChimeraX-ItemsInspection: 1.0.1 ChimeraX-IUPAC: 1.0 ChimeraX-KVFinder: 1.6.2 ChimeraX-Label: 1.1.14 ChimeraX-ListInfo: 1.2.2 ChimeraX-Log: 1.2 ChimeraX-LookingGlass: 1.1 ChimeraX-Maestro: 1.9.1 ChimeraX-Map: 1.3 ChimeraX-MapData: 2.0 ChimeraX-MapEraser: 1.0.1 ChimeraX-MapFilter: 2.0.1 ChimeraX-MapFit: 2.0 ChimeraX-MapSeries: 2.1.1 ChimeraX-Markers: 1.0.1 ChimeraX-Mask: 1.0.2 ChimeraX-MatchMaker: 2.2.2 ChimeraX-MCopy: 1.0 ChimeraX-MDcrds: 2.10.1 ChimeraX-MedicalToolbar: 1.1 ChimeraX-Meeting: 1.0.1 ChimeraX-MLP: 1.1.1 ChimeraX-mmCIF: 2.16 ChimeraX-MMTF: 2.2 ChimeraX-ModelArchive: 1.0 ChimeraX-Modeller: 1.5.19 ChimeraX-ModelPanel: 1.5.1 ChimeraX-ModelSeries: 1.0.1 ChimeraX-Mol2: 2.0.3 ChimeraX-Mole: 1.0 ChimeraX-Morph: 1.0.2 ChimeraX-MouseModes: 1.2 ChimeraX-Movie: 1.0 ChimeraX-MutationScores: 1.0 ChimeraX-Neuron: 1.0 ChimeraX-Nifti: 1.2 ChimeraX-NMRSTAR: 1.0.2 ChimeraX-NRRD: 1.2 ChimeraX-Nucleotides: 2.0.3 ChimeraX-OpenCommand: 1.14.1 ChimeraX-OrthoPick: 1.0.1 ChimeraX-PDB: 2.7.10 ChimeraX-PDBBio: 1.0.1 ChimeraX-PDBLibrary: 1.0.4 ChimeraX-PDBMatrices: 1.0 ChimeraX-PickBlobs: 1.0.1 ChimeraX-Positions: 1.0 ChimeraX-PresetMgr: 1.1.3 ChimeraX-ProfileGrids: 1.1.2 ChimeraX-PubChem: 2.2 ChimeraX-ReadPbonds: 1.0.1 ChimeraX-Registration: 1.1.2 ChimeraX-RemoteControl: 1.0 ChimeraX-RenderByAttr: 1.6.3 ChimeraX-RenumberResidues: 1.1 ChimeraX-ResidueFit: 1.0.1 ChimeraX-RestServer: 1.3.1 ChimeraX-RNALayout: 1.0 ChimeraX-RotamerLibMgr: 4.0 ChimeraX-RotamerLibsDunbrack: 2.0 ChimeraX-RotamerLibsDynameomics: 2.0 ChimeraX-RotamerLibsRichardson: 2.0 ChimeraX-SaveCommand: 1.5.1 ChimeraX-SchemeMgr: 1.0 ChimeraX-SDF: 2.0.3 ChimeraX-Segger: 1.0 ChimeraX-Segment: 1.0.1 ChimeraX-Segmentations: 3.5.7 ChimeraX-SelInspector: 1.0 ChimeraX-SeqView: 2.17.1 ChimeraX-Shape: 1.1 ChimeraX-Shell: 1.0.1 ChimeraX-Shortcuts: 1.2.1 ChimeraX-ShowSequences: 1.0.3 ChimeraX-SideView: 1.0.1 ChimeraX-SimilarStructures: 1.0.1 ChimeraX-Smiles: 2.1.2 ChimeraX-SmoothLines: 1.0 ChimeraX-SpaceNavigator: 1.0 ChimeraX-StdCommands: 1.19.1 ChimeraX-STL: 1.0.1 ChimeraX-Storm: 1.0 ChimeraX-StructMeasure: 1.2.1 ChimeraX-Struts: 1.0.1 ChimeraX-Surface: 1.0.1 ChimeraX-SwapAA: 2.0.1 ChimeraX-SwapRes: 2.5.2 ChimeraX-TapeMeasure: 1.0 ChimeraX-TaskManager: 1.0 ChimeraX-Test: 1.0 ChimeraX-Toolbar: 1.2.3 ChimeraX-ToolshedUtils: 1.2.4 ChimeraX-Topography: 1.0 ChimeraX-ToQuest: 1.0 ChimeraX-Tug: 1.0.1 ChimeraX-UI: 1.45.2 ChimeraX-Umap: 1.0 ChimeraX-uniprot: 2.3.1 ChimeraX-UnitCell: 1.0.1 ChimeraX-ViewDockX: 1.4.4 ChimeraX-VIPERdb: 1.0 ChimeraX-Vive: 1.1 ChimeraX-VolumeMenu: 1.0.1 ChimeraX-vrml: 1.0 ChimeraX-VTK: 1.0 ChimeraX-WavefrontOBJ: 1.0 ChimeraX-WebCam: 1.0.2 ChimeraX-WebServices: 1.1.5 ChimeraX-Zone: 1.0.1 colorama: 0.4.6 comm: 0.2.2 contourpy: 1.3.2 coverage: 7.9.1 cxservices: 1.2.3 cycler: 0.12.1 Cython: 3.0.12 debugpy: 1.8.14 decorator: 5.2.1 docutils: 0.21.2 executing: 2.2.0 filelock: 3.18.0 fonttools: 4.58.4 funcparserlib: 2.0.0a0 glfw: 2.9.0 grako: 3.16.5 h5py: 3.14.0 html2text: 2024.2.26 idna: 3.10 ihm: 2.2 imagecodecs: 2024.6.1 imagesize: 1.4.1 iniconfig: 2.1.0 ipykernel: 6.29.5 ipython: 8.26.0 ipywidgets: 8.1.7 jedi: 0.19.1 Jinja2: 3.1.6 jupyter_client: 8.6.3 jupyter_core: 5.8.1 jupyterlab_widgets: 3.0.15 kiwisolver: 1.4.8 line_profiler: 4.2.0 lxml: 5.3.1 lz4: 4.4.4 MarkupSafe: 3.0.2 matplotlib: 3.10.1 matplotlib-inline: 0.1.7 msgpack: 1.1.0 ndindex: 1.10.0 nest-asyncio: 1.6.0 netCDF4: 1.6.5 networkx: 3.3 nibabel: 5.2.0 nptyping: 2.5.0 numexpr: 2.11.0 numpy: 1.26.4 OpenMM: 8.2.0 openvr: 1.26.701 packaging: 24.2 ParmEd: 4.2.2 parso: 0.8.4 pep517: 0.13.1 pexpect: 4.9.0 pickleshare: 0.7.5 pillow: 10.4.0 pip: 25.0.1 pkginfo: 1.11.1 platformdirs: 4.3.8 pluggy: 1.6.0 prompt_toolkit: 3.0.51 psutil: 7.0.0 ptyprocess: 0.7.0 pure_eval: 0.2.3 py-cpuinfo: 9.0.0 pycollada: 0.8 pydicom: 2.4.4 pyelftools: 0.32 Pygments: 2.18.0 pynmrstar: 3.3.5 pynrrd: 1.0.0 PyOpenGL: 3.1.9 PyOpenGL-accelerate: 3.1.9 pyopenxr: 1.1.4501 pyparsing: 3.2.3 pyproject_hooks: 1.2.0 PyQt6-commercial: 6.8.1 PyQt6-Qt6: 6.8.2 PyQt6-WebEngine-commercial: 6.8.0 PyQt6-WebEngine-Qt6: 6.8.2 PyQt6_sip: 13.10.0 pytest: 8.4.1 pytest-cov: 6.2.1 python-dateutil: 2.9.0.post0 pytz: 2025.2 pyzmq: 27.0.0 qtconsole: 5.5.2 QtPy: 2.4.3 qtshim: 1.1 RandomWords: 0.4.0 requests: 2.32.3 roman-numerals-py: 3.1.0 scipy: 1.14.0 setuptools: 78.1.0 sfftk-rw: 0.8.1 six: 1.16.0 snowballstemmer: 3.0.1 sortedcontainers: 2.4.0 soupsieve: 2.7 Sphinx: 8.2.3 sphinx-autodoc-typehints: 3.1.0 sphinxcontrib-applehelp: 2.0.0 sphinxcontrib-blockdiag: 3.0.0 sphinxcontrib-devhelp: 2.0.0 sphinxcontrib-htmlhelp: 2.1.0 sphinxcontrib-jsmath: 1.0.1 sphinxcontrib-qthelp: 2.0.0 sphinxcontrib-serializinghtml: 2.0.0 stack-data: 0.6.3 superqt: 0.7.1 tables: 3.10.2 tcia_utils: 1.5.1 tifffile: 2025.3.13 tinyarray: 1.2.4 tornado: 6.5.1 traitlets: 5.14.3 typing_extensions: 4.14.0 tzdata: 2025.2 urllib3: 2.5.0 wcwidth: 0.2.13 webcolors: 24.11.1 wheel: 0.45.1 wheel-filename: 1.4.2 widgetsnbextension: 4.0.14
Change History (2)
comment:1 by , 2 weeks ago
Component: | Unassigned → DICOM |
---|---|
Owner: | set to |
Platform: | → all |
Project: | → ChimeraX |
Status: | new → assigned |
Summary: | ChimeraX bug report submission → 'NoneType' object has no attribute 'image_colors' |
comment:2 by , 2 weeks ago
Resolution: | → duplicate |
---|---|
Status: | assigned → closed |
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