Opened 7 weeks ago

Closed 7 weeks ago

#18809 closed defect (can't reproduce)

Various DLL load failures

Reported by: chimerax-bug-report@… Owned by: Greg Couch
Priority: normal Milestone:
Component: Platform Version:
Keywords: Cc:
Blocked By: Blocking:
Notify when closed: Platform: all
Project: ChimeraX

Description

The following bug report has been submitted:
Platform:        Windows-10-10.0.19045
ChimeraX Version: 1.10.1 (2025-07-24 20:15:27 UTC)
Description
Replace this text with list of actions that caused this problem to occur

Log:
Startup Errors  
---  
error | Bundle 'ChimeraX-Atomic' custom initialization failed  
warning | Traceback (most recent call last):  
File "E:\AAA科研软件\ChimeraX 1.10.1\bin\Lib\site-
packages\chimerax\core\toolshed\info.py", line 376, in initialize  
api._api_caller.initialize(api, session, self)  
File "E:\AAA科研软件\ChimeraX 1.10.1\bin\Lib\site-
packages\chimerax\core\toolshed\\__init__.py", line 1411, in initialize  
return cls._get_func(api, "initialize")(session, bi)  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
File "E:\AAA科研软件\ChimeraX 1.10.1\bin\Lib\site-
packages\chimerax\atomic\\__init__.py", line 145, in initialize  
initialize_atomic(session)  
File "E:\AAA科研软件\ChimeraX 1.10.1\bin\Lib\site-
packages\chimerax\atomic\\__init__.py", line 64, in initialize_atomic  
from chimerax import atomic_lib, pdb_lib # ensure libs we need are linked  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
File "E:\AAA科研软件\ChimeraX 1.10.1\bin\Lib\site-
packages\chimerax\pdb_lib\\__init__.py", line 49, in <module>  
from . import _load_libs  
ImportError: DLL load failed while importing _load_libs: 找不到指定的模块。  
  
UCSF ChimeraX version: 1.10.1 (2025-07-24)  
© 2016-2025 Regents of the University of California. All rights reserved.  
How to cite UCSF ChimeraX  

> open "D:\\\UCAS\\\病毒所\\\Alphafold3
> 预测\\\预测原始结果\\\NS4A4B+SLC3A2\\\SLC3A2与NS4A4B互作位点预测\\\fold_slc3a2_ns4a\\\fold_slc3a2_ns4a_model_0.cif"

Traceback (most recent call last):  
File "E:\AAA科研软件\ChimeraX 1.10.1\bin\Lib\site-
packages\chimerax\core\toolshed\info.py", line 501, in get_module  
m = importlib.import_module(self.package_name)  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
File "E:\AAA科研软件\ChimeraX 1.10.1\bin\Lib\importlib\\__init__.py", line 126, in
import_module  
return _bootstrap._gcd_import(name[level:], package, level)  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
File "<frozen importlib._bootstrap>", line 1204, in _gcd_import  
File "<frozen importlib._bootstrap>", line 1176, in _find_and_load  
File "<frozen importlib._bootstrap>", line 1147, in _find_and_load_unlocked  
File "<frozen importlib._bootstrap>", line 690, in _load_unlocked  
File "<frozen importlib._bootstrap_external>", line 940, in exec_module  
File "<frozen importlib._bootstrap>", line 241, in _call_with_frames_removed  
File "E:\AAA科研软件\ChimeraX 1.10.1\bin\Lib\site-
packages\chimerax\mmcif\\__init__.py", line 27, in <module>  
import chimerax.pdb_lib # noqa  
^^^^^^^^^^^^^^^^^^^^^^^  
File "E:\AAA科研软件\ChimeraX 1.10.1\bin\Lib\site-
packages\chimerax\pdb_lib\\__init__.py", line 49, in <module>  
from . import _load_libs  
ImportError: DLL load failed while importing _load_libs: 找不到指定的模块。  
  
During handling of the above exception, another exception occurred:  
  
Traceback (most recent call last):  
File "E:\AAA科研软件\ChimeraX 1.10.1\bin\Lib\site-
packages\chimerax\core\\__main__.py", line 1016, in init  
commands.run(sess, "open %s" % StringArg.unparse(arg))  
File "E:\AAA科研软件\ChimeraX 1.10.1\bin\Lib\site-
packages\chimerax\core\commands\run.py", line 49, in run  
results = command.run(text, log=log, return_json=return_json)  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
File "E:\AAA科研软件\ChimeraX 1.10.1\bin\Lib\site-
packages\chimerax\core\commands\cli.py", line 3221, in run  
result = ci.function(session, **kw_args)  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
File "E:\AAA科研软件\ChimeraX 1.10.1\bin\Lib\site-
packages\chimerax\open_command\cmd.py", line 93, in cmd_open  
provider_args = mgr.open_args(data_format)  
^^^^^^^^^^^^^^^^^^^^^^^^^^  
File "E:\AAA科研软件\ChimeraX 1.10.1\bin\Lib\site-
packages\chimerax\open_command\manager.py", line 241, in open_args  
opener_info = self.opener_info(data_format)  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
File "E:\AAA科研软件\ChimeraX 1.10.1\bin\Lib\site-
packages\chimerax\open_command\manager.py", line 250, in opener_info  
return provider_info.bundle_info.run_provider(self.session,
provider_info.name, self)  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
File "E:\AAA科研软件\ChimeraX 1.10.1\bin\Lib\site-
packages\chimerax\core\toolshed\info.py", line 396, in run_provider  
api = self._get_api(session.logger)  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
File "E:\AAA科研软件\ChimeraX 1.10.1\bin\Lib\site-
packages\chimerax\core\toolshed\info.py", line 520, in _get_api  
m = self.get_module()  
^^^^^^^^^^^^^^^^^  
File "E:\AAA科研软件\ChimeraX 1.10.1\bin\Lib\site-
packages\chimerax\core\toolshed\info.py", line 503, in get_module  
raise ToolshedError("Error importing bundle %s's module: %s" % (self.name,
str(e)))  
chimerax.core.toolshed.ToolshedError: Error importing bundle ChimeraX-mmCIF's
module: DLL load failed while importing _load_libs: 找不到指定的模块。  
  
chimerax.core.toolshed.ToolshedError: Error importing bundle ChimeraX-mmCIF's
module: DLL load failed while importing _load_libs: 找不到指定的模块。  
  
File "E:\AAA科研软件\ChimeraX 1.10.1\bin\Lib\site-
packages\chimerax\core\toolshed\info.py", line 503, in get_module  
raise ToolshedError("Error importing bundle %s's module: %s" % (self.name,
str(e)))  
  
See log for complete Python traceback.  
  

> open "D:/UCAS/病毒所/Alphafold3
> 预测/预测原始结果/NS4A4B+SLC3A2/SLC3A2与NS4A4B互作位点预测/fold_slc3a2_ns4a/fold_slc3a2_ns4a_model_0.cif"

Traceback (most recent call last):  
File "E:\AAA科研软件\ChimeraX 1.10.1\bin\Lib\site-
packages\chimerax\core\toolshed\info.py", line 501, in get_module  
m = importlib.import_module(self.package_name)  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
File "E:\AAA科研软件\ChimeraX 1.10.1\bin\Lib\importlib\\__init__.py", line 126, in
import_module  
return _bootstrap._gcd_import(name[level:], package, level)  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
File "<frozen importlib._bootstrap>", line 1204, in _gcd_import  
File "<frozen importlib._bootstrap>", line 1176, in _find_and_load  
File "<frozen importlib._bootstrap>", line 1147, in _find_and_load_unlocked  
File "<frozen importlib._bootstrap>", line 690, in _load_unlocked  
File "<frozen importlib._bootstrap_external>", line 940, in exec_module  
File "<frozen importlib._bootstrap>", line 241, in _call_with_frames_removed  
File "E:\AAA科研软件\ChimeraX 1.10.1\bin\Lib\site-
packages\chimerax\mmcif\\__init__.py", line 27, in <module>  
import chimerax.pdb_lib # noqa  
^^^^^^^^^^^^^^^^^^^^^^^  
File "E:\AAA科研软件\ChimeraX 1.10.1\bin\Lib\site-
packages\chimerax\pdb_lib\\__init__.py", line 49, in <module>  
from . import _load_libs  
ImportError: DLL load failed while importing _load_libs: 找不到指定的模块。  
  
During handling of the above exception, another exception occurred:  
  
Traceback (most recent call last):  
File "E:\AAA科研软件\ChimeraX 1.10.1\bin\Lib\site-
packages\chimerax\open_command\dialog.py", line 339, in _qt_safe  
run(session, "open " + " ".join([FileNameArg.unparse(p) for p in paths]) + (""  
File "E:\AAA科研软件\ChimeraX 1.10.1\bin\Lib\site-
packages\chimerax\core\commands\run.py", line 49, in run  
results = command.run(text, log=log, return_json=return_json)  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
File "E:\AAA科研软件\ChimeraX 1.10.1\bin\Lib\site-
packages\chimerax\core\commands\cli.py", line 3221, in run  
result = ci.function(session, **kw_args)  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
File "E:\AAA科研软件\ChimeraX 1.10.1\bin\Lib\site-
packages\chimerax\open_command\cmd.py", line 93, in cmd_open  
provider_args = mgr.open_args(data_format)  
^^^^^^^^^^^^^^^^^^^^^^^^^^  
File "E:\AAA科研软件\ChimeraX 1.10.1\bin\Lib\site-
packages\chimerax\open_command\manager.py", line 241, in open_args  
opener_info = self.opener_info(data_format)  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
File "E:\AAA科研软件\ChimeraX 1.10.1\bin\Lib\site-
packages\chimerax\open_command\manager.py", line 250, in opener_info  
return provider_info.bundle_info.run_provider(self.session,
provider_info.name, self)  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
File "E:\AAA科研软件\ChimeraX 1.10.1\bin\Lib\site-
packages\chimerax\core\toolshed\info.py", line 396, in run_provider  
api = self._get_api(session.logger)  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
File "E:\AAA科研软件\ChimeraX 1.10.1\bin\Lib\site-
packages\chimerax\core\toolshed\info.py", line 520, in _get_api  
m = self.get_module()  
^^^^^^^^^^^^^^^^^  
File "E:\AAA科研软件\ChimeraX 1.10.1\bin\Lib\site-
packages\chimerax\core\toolshed\info.py", line 503, in get_module  
raise ToolshedError("Error importing bundle %s's module: %s" % (self.name,
str(e)))  
chimerax.core.toolshed.ToolshedError: Error importing bundle ChimeraX-mmCIF's
module: DLL load failed while importing _load_libs: 找不到指定的模块。  
  
chimerax.core.toolshed.ToolshedError: Error importing bundle ChimeraX-mmCIF's
module: DLL load failed while importing _load_libs: 找不到指定的模块。  
  
File "E:\AAA科研软件\ChimeraX 1.10.1\bin\Lib\site-
packages\chimerax\core\toolshed\info.py", line 503, in get_module  
raise ToolshedError("Error importing bundle %s's module: %s" % (self.name,
str(e)))  
  
See log for complete Python traceback.  
  

> open "D:/UCAS/病毒所/Alphafold3
> 预测/预测原始结果/NS4A4B+SLC3A2/SLC3A2与NS4A4B互作位点预测/fold_slc3a2_ns4a/fold_slc3a2_ns4a_model_0.cif"

Traceback (most recent call last):  
File "E:\AAA科研软件\ChimeraX 1.10.1\bin\Lib\site-
packages\chimerax\core\toolshed\info.py", line 501, in get_module  
m = importlib.import_module(self.package_name)  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
File "E:\AAA科研软件\ChimeraX 1.10.1\bin\Lib\importlib\\__init__.py", line 126, in
import_module  
return _bootstrap._gcd_import(name[level:], package, level)  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
File "<frozen importlib._bootstrap>", line 1204, in _gcd_import  
File "<frozen importlib._bootstrap>", line 1176, in _find_and_load  
File "<frozen importlib._bootstrap>", line 1147, in _find_and_load_unlocked  
File "<frozen importlib._bootstrap>", line 690, in _load_unlocked  
File "<frozen importlib._bootstrap_external>", line 940, in exec_module  
File "<frozen importlib._bootstrap>", line 241, in _call_with_frames_removed  
File "E:\AAA科研软件\ChimeraX 1.10.1\bin\Lib\site-
packages\chimerax\mmcif\\__init__.py", line 27, in <module>  
import chimerax.pdb_lib # noqa  
^^^^^^^^^^^^^^^^^^^^^^^  
File "E:\AAA科研软件\ChimeraX 1.10.1\bin\Lib\site-
packages\chimerax\pdb_lib\\__init__.py", line 49, in <module>  
from . import _load_libs  
ImportError: DLL load failed while importing _load_libs: 找不到指定的模块。  
  
During handling of the above exception, another exception occurred:  
  
Traceback (most recent call last):  
File "E:\AAA科研软件\ChimeraX 1.10.1\bin\Lib\site-packages\chimerax\ui\gui.py",
line 768, in dropEvent  
_open_dropped_file(self.session, p)  
File "E:\AAA科研软件\ChimeraX 1.10.1\bin\Lib\site-packages\chimerax\ui\gui.py",
line 2154, in _open_dropped_file  
run(session, 'open %s' % FileNameArg.unparse(path))  
File "E:\AAA科研软件\ChimeraX 1.10.1\bin\Lib\site-
packages\chimerax\core\commands\run.py", line 49, in run  
results = command.run(text, log=log, return_json=return_json)  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
File "E:\AAA科研软件\ChimeraX 1.10.1\bin\Lib\site-
packages\chimerax\core\commands\cli.py", line 3221, in run  
result = ci.function(session, **kw_args)  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
File "E:\AAA科研软件\ChimeraX 1.10.1\bin\Lib\site-
packages\chimerax\open_command\cmd.py", line 93, in cmd_open  
provider_args = mgr.open_args(data_format)  
^^^^^^^^^^^^^^^^^^^^^^^^^^  
File "E:\AAA科研软件\ChimeraX 1.10.1\bin\Lib\site-
packages\chimerax\open_command\manager.py", line 241, in open_args  
opener_info = self.opener_info(data_format)  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
File "E:\AAA科研软件\ChimeraX 1.10.1\bin\Lib\site-
packages\chimerax\open_command\manager.py", line 250, in opener_info  
return provider_info.bundle_info.run_provider(self.session,
provider_info.name, self)  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
File "E:\AAA科研软件\ChimeraX 1.10.1\bin\Lib\site-
packages\chimerax\core\toolshed\info.py", line 396, in run_provider  
api = self._get_api(session.logger)  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
File "E:\AAA科研软件\ChimeraX 1.10.1\bin\Lib\site-
packages\chimerax\core\toolshed\info.py", line 520, in _get_api  
m = self.get_module()  
^^^^^^^^^^^^^^^^^  
File "E:\AAA科研软件\ChimeraX 1.10.1\bin\Lib\site-
packages\chimerax\core\toolshed\info.py", line 503, in get_module  
raise ToolshedError("Error importing bundle %s's module: %s" % (self.name,
str(e)))  
chimerax.core.toolshed.ToolshedError: Error importing bundle ChimeraX-mmCIF's
module: DLL load failed while importing _load_libs: 找不到指定的模块。  
  
chimerax.core.toolshed.ToolshedError: Error importing bundle ChimeraX-mmCIF's
module: DLL load failed while importing _load_libs: 找不到指定的模块。  
  
File "E:\AAA科研软件\ChimeraX 1.10.1\bin\Lib\site-
packages\chimerax\core\toolshed\info.py", line 503, in get_module  
raise ToolshedError("Error importing bundle %s's module: %s" % (self.name,
str(e)))  
  
See log for complete Python traceback.  
  

> open "D:\UCAS\病毒所\Alphafold3
> 预测\预测原始结果\NS4A4B+SLC3A2\2025-9-17\fold_slc3a2_ns4a_ns4b_37\fold_slc3a2_ns4a_ns4b_37_model_0.cif"
> format mmcif

Traceback (most recent call last):  
File "E:\AAA科研软件\ChimeraX 1.10.1\bin\Lib\site-
packages\chimerax\core\toolshed\info.py", line 501, in get_module  
m = importlib.import_module(self.package_name)  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
File "E:\AAA科研软件\ChimeraX 1.10.1\bin\Lib\importlib\\__init__.py", line 126, in
import_module  
return _bootstrap._gcd_import(name[level:], package, level)  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
File "<frozen importlib._bootstrap>", line 1204, in _gcd_import  
File "<frozen importlib._bootstrap>", line 1176, in _find_and_load  
File "<frozen importlib._bootstrap>", line 1147, in _find_and_load_unlocked  
File "<frozen importlib._bootstrap>", line 690, in _load_unlocked  
File "<frozen importlib._bootstrap_external>", line 940, in exec_module  
File "<frozen importlib._bootstrap>", line 241, in _call_with_frames_removed  
File "E:\AAA科研软件\ChimeraX 1.10.1\bin\Lib\site-
packages\chimerax\mmcif\\__init__.py", line 27, in <module>  
import chimerax.pdb_lib # noqa  
^^^^^^^^^^^^^^^^^^^^^^^  
File "E:\AAA科研软件\ChimeraX 1.10.1\bin\Lib\site-
packages\chimerax\pdb_lib\\__init__.py", line 49, in <module>  
from . import _load_libs  
ImportError: DLL load failed while importing _load_libs: 找不到指定的模块。  
  
During handling of the above exception, another exception occurred:  
  
Traceback (most recent call last):  
File "E:\AAA科研软件\ChimeraX 1.10.1\bin\Lib\site-
packages\chimerax\ui\widgets\htmlview.py", line 316, in interceptRequest  
self._callback(info)  
File "E:\AAA科研软件\ChimeraX 1.10.1\bin\Lib\site-
packages\chimerax\ui\widgets\htmlview.py", line 93, in _intercept  
return interceptor(request_info, *args)  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
File "E:\AAA科研软件\ChimeraX 1.10.1\bin\Lib\site-
packages\chimerax\ui\widgets\htmlview.py", line 349, in intercept  
chimerax_intercept(*args, view=view, session=session)  
File "E:\AAA科研软件\ChimeraX 1.10.1\bin\Lib\site-
packages\chimerax\ui\widgets\htmlview.py", line 455, in chimerax_intercept  
session.ui.thread_safe(defer, session, qurl.url(no_formatting), from_dir)  
File "E:\AAA科研软件\ChimeraX 1.10.1\bin\Lib\site-packages\chimerax\ui\gui.py",
line 479, in thread_safe  
func(*args, **kw)  
File "E:\AAA科研软件\ChimeraX 1.10.1\bin\Lib\site-
packages\chimerax\ui\widgets\htmlview.py", line 442, in defer  
cxcmd(session, topic)  
File "E:\AAA科研软件\ChimeraX 1.10.1\bin\Lib\site-
packages\chimerax\ui\widgets\htmlview.py", line 464, in cxcmd  
run(session, cmd)  
File "E:\AAA科研软件\ChimeraX 1.10.1\bin\Lib\site-
packages\chimerax\core\commands\run.py", line 49, in run  
results = command.run(text, log=log, return_json=return_json)  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
File "E:\AAA科研软件\ChimeraX 1.10.1\bin\Lib\site-
packages\chimerax\core\commands\cli.py", line 3221, in run  
result = ci.function(session, **kw_args)  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
File "E:\AAA科研软件\ChimeraX 1.10.1\bin\Lib\site-
packages\chimerax\open_command\cmd.py", line 93, in cmd_open  
provider_args = mgr.open_args(data_format)  
^^^^^^^^^^^^^^^^^^^^^^^^^^  
File "E:\AAA科研软件\ChimeraX 1.10.1\bin\Lib\site-
packages\chimerax\open_command\manager.py", line 241, in open_args  
opener_info = self.opener_info(data_format)  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
File "E:\AAA科研软件\ChimeraX 1.10.1\bin\Lib\site-
packages\chimerax\open_command\manager.py", line 250, in opener_info  
return provider_info.bundle_info.run_provider(self.session,
provider_info.name, self)  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
File "E:\AAA科研软件\ChimeraX 1.10.1\bin\Lib\site-
packages\chimerax\core\toolshed\info.py", line 396, in run_provider  
api = self._get_api(session.logger)  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
File "E:\AAA科研软件\ChimeraX 1.10.1\bin\Lib\site-
packages\chimerax\core\toolshed\info.py", line 520, in _get_api  
m = self.get_module()  
^^^^^^^^^^^^^^^^^  
File "E:\AAA科研软件\ChimeraX 1.10.1\bin\Lib\site-
packages\chimerax\core\toolshed\info.py", line 503, in get_module  
raise ToolshedError("Error importing bundle %s's module: %s" % (self.name,
str(e)))  
chimerax.core.toolshed.ToolshedError: Error importing bundle ChimeraX-mmCIF's
module: DLL load failed while importing _load_libs: 找不到指定的模块。  
  
chimerax.core.toolshed.ToolshedError: Error importing bundle ChimeraX-mmCIF's
module: DLL load failed while importing _load_libs: 找不到指定的模块。  
  
File "E:\AAA科研软件\ChimeraX 1.10.1\bin\Lib\site-
packages\chimerax\core\toolshed\info.py", line 503, in get_module  
raise ToolshedError("Error importing bundle %s's module: %s" % (self.name,
str(e)))  
  
See log for complete Python traceback.  
  

> open "D:\UCAS\病毒所\Alphafold3
> 预测\预测原始结果\NS4A4B+SLC3A2\2025-9-17\fold_slc3a2_ns4a_ns4b_37\fold_slc3a2_ns4a_ns4b_37_model_0.cif"
> format mmcif

Traceback (most recent call last):  
File "E:\AAA科研软件\ChimeraX 1.10.1\bin\Lib\site-
packages\chimerax\ui\widgets\htmlview.py", line 316, in interceptRequest  
self._callback(info)  
File "E:\AAA科研软件\ChimeraX 1.10.1\bin\Lib\site-
packages\chimerax\ui\widgets\htmlview.py", line 93, in _intercept  
return interceptor(request_info, *args)  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
File "E:\AAA科研软件\ChimeraX 1.10.1\bin\Lib\site-
packages\chimerax\ui\widgets\htmlview.py", line 349, in intercept  
chimerax_intercept(*args, view=view, session=session)  
File "E:\AAA科研软件\ChimeraX 1.10.1\bin\Lib\site-
packages\chimerax\ui\widgets\htmlview.py", line 455, in chimerax_intercept  
session.ui.thread_safe(defer, session, qurl.url(no_formatting), from_dir)  
File "E:\AAA科研软件\ChimeraX 1.10.1\bin\Lib\site-packages\chimerax\ui\gui.py",
line 479, in thread_safe  
func(*args, **kw)  
File "E:\AAA科研软件\ChimeraX 1.10.1\bin\Lib\site-
packages\chimerax\ui\widgets\htmlview.py", line 442, in defer  
cxcmd(session, topic)  
File "E:\AAA科研软件\ChimeraX 1.10.1\bin\Lib\site-
packages\chimerax\ui\widgets\htmlview.py", line 464, in cxcmd  
run(session, cmd)  
File "E:\AAA科研软件\ChimeraX 1.10.1\bin\Lib\site-
packages\chimerax\core\commands\run.py", line 49, in run  
results = command.run(text, log=log, return_json=return_json)  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
File "E:\AAA科研软件\ChimeraX 1.10.1\bin\Lib\site-
packages\chimerax\core\commands\cli.py", line 3221, in run  
result = ci.function(session, **kw_args)  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
File "E:\AAA科研软件\ChimeraX 1.10.1\bin\Lib\site-
packages\chimerax\open_command\cmd.py", line 132, in cmd_open  
models = Command(session, registry=registry).run(provider_cmd_text,
log=log)[0]  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
File "E:\AAA科研软件\ChimeraX 1.10.1\bin\Lib\site-
packages\chimerax\core\commands\cli.py", line 3221, in run  
result = ci.function(session, **kw_args)  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
File "E:\AAA科研软件\ChimeraX 1.10.1\bin\Lib\site-
packages\chimerax\open_command\cmd.py", line 296, in provider_open  
session.models.add(opened_models)  
File "E:\AAA科研软件\ChimeraX 1.10.1\bin\Lib\site-
packages\chimerax\core\models.py", line 797, in add  
m.added_to_session(session)  
File "E:\AAA科研软件\ChimeraX 1.10.1\bin\Lib\site-
packages\chimerax\atomic\structure.py", line 1285, in added_to_session  
super().added_to_session(session)  
File "E:\AAA科研软件\ChimeraX 1.10.1\bin\Lib\site-
packages\chimerax\atomic\structure.py", line 193, in added_to_session  
self._start_change_tracking(session.change_tracker)  
^^^^^^^^^^^^^^^^^^^^^^  
AttributeError: 'Session' object has no attribute 'change_tracker'  
  
AttributeError: 'Session' object has no attribute 'change_tracker'  
  
File "E:\AAA科研软件\ChimeraX 1.10.1\bin\Lib\site-
packages\chimerax\atomic\structure.py", line 193, in added_to_session  
self._start_change_tracking(session.change_tracker)  
^^^^^^^^^^^^^^^^^^^^^^  
  
See log for complete Python traceback.  
  




OpenGL version: 3.3.0 NVIDIA 566.41
OpenGL renderer: NVIDIA GeForce MX350/PCIe/SSE2
OpenGL vendor: NVIDIA Corporation

Python: 3.11.4
Locale: zh_CN.cp936
Qt version: PyQt6 6.8.1, Qt 6.8.2
Qt runtime version: 6.8.2
Qt platform: windows

Manufacturer: Dell Inc.
Model: Inspiron 5502
OS: Microsoft Windows 10 家庭中文版 (Build 19045)
Memory: 16,889,192,448
MaxProcessMemory: 137,438,953,344
CPU: 8 11th Gen Intel(R) Core(TM) i5-1135G7 @ 2.40GHz
OSLanguage: zh-CN

Installed Packages:
    alabaster: 1.0.0
    appdirs: 1.4.4
    asttokens: 3.0.0
    babel: 2.17.0
    beautifulsoup4: 4.13.3
    blockdiag: 3.0.0
    blosc2: 3.6.1
    build: 1.2.2.post1
    certifi: 2025.7.14
    cftime: 1.6.4.post1
    charset-normalizer: 3.4.2
    ChimeraX-AddCharge: 1.5.19
    ChimeraX-AddH: 2.2.7
    ChimeraX-AlignmentAlgorithms: 2.0.2
    ChimeraX-AlignmentHdrs: 3.6.1
    ChimeraX-AlignmentMatrices: 2.1
    ChimeraX-Alignments: 2.20.2
    ChimeraX-AlphaFold: 1.0.1
    ChimeraX-AltlocExplorer: 1.1.2
    ChimeraX-AmberInfo: 1.0
    ChimeraX-Aniso: 1.1.4
    ChimeraX-Arrays: 1.1
    ChimeraX-Atomic: 1.60.7
    ChimeraX-AtomicLibrary: 14.1.19
    ChimeraX-AtomSearch: 2.0.1
    ChimeraX-AxesPlanes: 2.4
    ChimeraX-BasicActions: 1.1.3
    ChimeraX-BILD: 1.0
    ChimeraX-BlastProtein: 3.0.0
    ChimeraX-Boltz: 1.0
    ChimeraX-BondRot: 2.0.4
    ChimeraX-BugReporter: 1.0.2
    ChimeraX-BuildStructure: 2.13.1
    ChimeraX-Bumps: 1.0
    ChimeraX-BundleBuilder: 1.5.1
    ChimeraX-ButtonPanel: 1.0.1
    ChimeraX-CageBuilder: 1.0.1
    ChimeraX-CellPack: 1.0
    ChimeraX-Centroids: 1.4
    ChimeraX-ChangeChains: 1.1
    ChimeraX-CheckWaters: 1.5
    ChimeraX-ChemGroup: 2.0.2
    ChimeraX-Clashes: 2.3
    ChimeraX-ColorActions: 1.0.5
    ChimeraX-ColorGlobe: 1.0
    ChimeraX-ColorKey: 1.5.8
    ChimeraX-CommandLine: 1.3
    ChimeraX-ConnectStructure: 2.0.1
    ChimeraX-Contacts: 1.0.1
    ChimeraX-Core: 1.10.1
    ChimeraX-CoreFormats: 1.2
    ChimeraX-coulombic: 1.4.5
    ChimeraX-Crosslinks: 1.0
    ChimeraX-Crystal: 1.0
    ChimeraX-CrystalContacts: 1.0.1
    ChimeraX-DataFormats: 1.2.4
    ChimeraX-Dicom: 1.2.7
    ChimeraX-DistMonitor: 1.4.2
    ChimeraX-DockPrep: 1.1.4
    ChimeraX-Dssp: 2.0
    ChimeraX-EMDB-SFF: 1.0
    ChimeraX-ESMFold: 1.0
    ChimeraX-FileHistory: 1.0.1
    ChimeraX-FunctionKey: 1.0.1
    ChimeraX-Geometry: 1.3
    ChimeraX-gltf: 1.0
    ChimeraX-Graphics: 1.4.1
    ChimeraX-Hbonds: 2.5.1
    ChimeraX-Help: 1.3
    ChimeraX-HKCage: 1.3
    ChimeraX-IHM: 1.1
    ChimeraX-ImageFormats: 1.2
    ChimeraX-IMOD: 1.0
    ChimeraX-IO: 1.0.3
    ChimeraX-ItemsInspection: 1.0.1
    ChimeraX-IUPAC: 1.0
    ChimeraX-KVFinder: 1.6.2
    ChimeraX-Label: 1.1.14
    ChimeraX-ListInfo: 1.2.2
    ChimeraX-Log: 1.2
    ChimeraX-LookingGlass: 1.1
    ChimeraX-Maestro: 1.9.1
    ChimeraX-Map: 1.3
    ChimeraX-MapData: 2.0
    ChimeraX-MapEraser: 1.0.1
    ChimeraX-MapFilter: 2.0.1
    ChimeraX-MapFit: 2.0
    ChimeraX-MapSeries: 2.1.1
    ChimeraX-Markers: 1.0.1
    ChimeraX-Mask: 1.0.2
    ChimeraX-MatchMaker: 2.2.2
    ChimeraX-MCopy: 1.0
    ChimeraX-MDcrds: 2.10.1
    ChimeraX-MedicalToolbar: 1.1
    ChimeraX-Meeting: 1.0.1
    ChimeraX-MLP: 1.1.1
    ChimeraX-mmCIF: 2.16
    ChimeraX-MMTF: 2.2
    ChimeraX-ModelArchive: 1.0
    ChimeraX-Modeller: 1.5.19
    ChimeraX-ModelPanel: 1.5.1
    ChimeraX-ModelSeries: 1.0.1
    ChimeraX-Mol2: 2.0.3
    ChimeraX-Mole: 1.0
    ChimeraX-Morph: 1.0.2
    ChimeraX-MouseModes: 1.2
    ChimeraX-Movie: 1.0
    ChimeraX-MutationScores: 1.0
    ChimeraX-Neuron: 1.0
    ChimeraX-Nifti: 1.2
    ChimeraX-NMRSTAR: 1.0.2
    ChimeraX-NRRD: 1.2
    ChimeraX-Nucleotides: 2.0.3
    ChimeraX-OpenCommand: 1.14.1
    ChimeraX-OrthoPick: 1.0.1
    ChimeraX-PDB: 2.7.10
    ChimeraX-PDBBio: 1.0.1
    ChimeraX-PDBLibrary: 1.0.4
    ChimeraX-PDBMatrices: 1.0
    ChimeraX-PickBlobs: 1.0.1
    ChimeraX-Positions: 1.0
    ChimeraX-PresetMgr: 1.1.3
    ChimeraX-ProfileGrids: 1.1.3
    ChimeraX-PubChem: 2.2
    ChimeraX-ReadPbonds: 1.0.1
    ChimeraX-Registration: 1.1.2
    ChimeraX-RemoteControl: 1.0
    ChimeraX-RenderByAttr: 1.6.3
    ChimeraX-RenumberResidues: 1.1
    ChimeraX-ResidueFit: 1.0.1
    ChimeraX-RestServer: 1.3.1
    ChimeraX-RNALayout: 1.0
    ChimeraX-RotamerLibMgr: 4.0
    ChimeraX-RotamerLibsDunbrack: 2.0
    ChimeraX-RotamerLibsDynameomics: 2.0
    ChimeraX-RotamerLibsRichardson: 2.0
    ChimeraX-SaveCommand: 1.5.1
    ChimeraX-SchemeMgr: 1.0
    ChimeraX-SDF: 2.0.3
    ChimeraX-Segger: 1.0
    ChimeraX-Segment: 1.0.1
    ChimeraX-Segmentations: 3.5.7
    ChimeraX-SelInspector: 1.0
    ChimeraX-SeqView: 2.17.1
    ChimeraX-Shape: 1.1
    ChimeraX-Shell: 1.0.1
    ChimeraX-Shortcuts: 1.2.1
    ChimeraX-ShowSequences: 1.0.3
    ChimeraX-SideView: 1.0.1
    ChimeraX-SimilarStructures: 1.0.1
    ChimeraX-Smiles: 2.1.2
    ChimeraX-SmoothLines: 1.0
    ChimeraX-SpaceNavigator: 1.0
    ChimeraX-StdCommands: 1.19.1
    ChimeraX-STL: 1.0.1
    ChimeraX-Storm: 1.0
    ChimeraX-StructMeasure: 1.2.1
    ChimeraX-Struts: 1.0.1
    ChimeraX-Surface: 1.0.1
    ChimeraX-SwapAA: 2.0.1
    ChimeraX-SwapRes: 2.5.2
    ChimeraX-TapeMeasure: 1.0
    ChimeraX-TaskManager: 1.0
    ChimeraX-Test: 1.0
    ChimeraX-Toolbar: 1.2.3
    ChimeraX-ToolshedUtils: 1.2.4
    ChimeraX-Topography: 1.0
    ChimeraX-ToQuest: 1.0
    ChimeraX-Tug: 1.0.1
    ChimeraX-UI: 1.45.2
    ChimeraX-Umap: 1.0
    ChimeraX-uniprot: 2.3.1
    ChimeraX-UnitCell: 1.0.1
    ChimeraX-ViewDockX: 1.4.4
    ChimeraX-VIPERdb: 1.0
    ChimeraX-Vive: 1.1
    ChimeraX-VolumeMenu: 1.0.1
    ChimeraX-vrml: 1.0
    ChimeraX-VTK: 1.0
    ChimeraX-WavefrontOBJ: 1.0
    ChimeraX-WebCam: 1.0.2
    ChimeraX-WebServices: 1.1.5
    ChimeraX-Zone: 1.0.1
    colorama: 0.4.6
    comm: 0.2.2
    comtypes: 1.4.10
    contourpy: 1.3.2
    coverage: 7.10.0
    cxservices: 1.2.3
    cycler: 0.12.1
    Cython: 3.0.12
    debugpy: 1.8.15
    decorator: 5.2.1
    docutils: 0.21.2
    executing: 2.2.0
    filelock: 3.18.0
    fonttools: 4.59.0
    funcparserlib: 2.0.0a0
    glfw: 2.9.0
    grako: 3.16.5
    h5py: 3.14.0
    html2text: 2024.2.26
    idna: 3.10
    ihm: 2.2
    imagecodecs: 2024.6.1
    imagesize: 1.4.1
    iniconfig: 2.1.0
    ipykernel: 6.29.5
    ipython: 8.26.0
    ipywidgets: 8.1.7
    jedi: 0.19.1
    Jinja2: 3.1.6
    jupyter_client: 8.6.3
    jupyter_core: 5.8.1
    jupyterlab_widgets: 3.0.15
    kiwisolver: 1.4.8
    line_profiler: 4.2.0
    lxml: 5.3.1
    lz4: 4.3.2
    MarkupSafe: 3.0.2
    matplotlib: 3.10.1
    matplotlib-inline: 0.1.7
    msgpack: 1.1.0
    ndindex: 1.10.0
    nest-asyncio: 1.6.0
    netCDF4: 1.6.5
    networkx: 3.3
    nibabel: 5.2.0
    nptyping: 2.5.0
    numexpr: 2.11.0
    numpy: 1.26.4
    nvidia-nvjitlink-cu12: 12.9.86
    OpenMM: 8.2.0
    OpenMM-CUDA-12: 8.2.0
    openvr: 1.26.701
    packaging: 24.2
    ParmEd: 4.2.2
    parso: 0.8.4
    pep517: 0.13.1
    pickleshare: 0.7.5
    pillow: 10.4.0
    pip: 25.0.1
    pkginfo: 1.11.1
    platformdirs: 4.3.8
    pluggy: 1.6.0
    prompt_toolkit: 3.0.51
    psutil: 7.0.0
    pure_eval: 0.2.3
    py-cpuinfo: 9.0.0
    pycollada: 0.8
    pydicom: 2.4.4
    Pygments: 2.18.0
    pynmrstar: 3.3.5
    pynrrd: 1.0.0
    PyOpenGL: 3.1.9
    PyOpenGL-accelerate: 3.1.9
    pyopenxr: 1.1.4501
    pyparsing: 3.2.3
    pyproject_hooks: 1.2.0
    PyQt6-commercial: 6.8.1
    PyQt6-Qt6: 6.8.2
    PyQt6-WebEngine-commercial: 6.8.0
    PyQt6-WebEngine-Qt6: 6.8.2
    PyQt6_sip: 13.10.0
    pytest: 8.4.1
    pytest-cov: 6.2.1
    python-dateutil: 2.9.0.post0
    pytz: 2025.2
    pywin32: 310
    pyzmq: 27.0.0
    qtconsole: 5.5.2
    QtPy: 2.4.3
    qtshim: 1.1
    RandomWords: 0.4.0
    requests: 2.32.3
    roman-numerals-py: 3.1.0
    scipy: 1.14.0
    setuptools: 78.1.0
    sfftk-rw: 0.8.1
    six: 1.16.0
    snowballstemmer: 3.0.1
    sortedcontainers: 2.4.0
    soupsieve: 2.7
    Sphinx: 8.2.3
    sphinx-autodoc-typehints: 3.1.0
    sphinxcontrib-applehelp: 2.0.0
    sphinxcontrib-blockdiag: 3.0.0
    sphinxcontrib-devhelp: 2.0.0
    sphinxcontrib-htmlhelp: 2.1.0
    sphinxcontrib-jsmath: 1.0.1
    sphinxcontrib-qthelp: 2.0.0
    sphinxcontrib-serializinghtml: 2.0.0
    stack-data: 0.6.3
    superqt: 0.7.1
    tables: 3.10.2
    tcia_utils: 1.5.1
    tifffile: 2025.3.13
    tinyarray: 1.2.4
    tornado: 6.5.1
    traitlets: 5.14.3
    typing_extensions: 4.14.1
    tzdata: 2025.2
    urllib3: 2.5.0
    wcwidth: 0.2.13
    webcolors: 24.11.1
    wheel: 0.45.1
    wheel-filename: 1.4.2
    widgetsnbextension: 4.0.14
    WMI: 1.5.1

Change History (2)

comment:1 by Eric Pettersen, 7 weeks ago

Component: UnassignedPlatform
Owner: set to Greg Couch
Platform: all
Project: ChimeraX
Status: newassigned
Summary: ChimeraX bug report submissionVarious DLL load failures

comment:2 by Greg Couch, 7 weeks ago

Resolution: can't reproduce
Status: assignedclosed

Looks like a corrupt installation.

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