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Opened 3 months ago
Closed 3 months ago
#18764 closed defect (can't reproduce)
Crash in event loop
| Reported by: | Owned by: | Eric Pettersen | |
|---|---|---|---|
| Priority: | normal | Milestone: | |
| Component: | Core | Version: | |
| Keywords: | Cc: | Tom Goddard | |
| Blocked By: | Blocking: | ||
| Notify when closed: | Platform: | all | |
| Project: | ChimeraX |
Description
The following bug report has been submitted:
Platform: Windows-10-10.0.26100
ChimeraX Version: 1.11.dev202509100058 (2025-09-10 00:58:36 UTC)
Description
Last time you used ChimeraX it crashed.
Please describe steps that led to the crash here.
Windows fatal exception: code 0x8001010d
Thread 0x00003a08 (most recent call first):
File "E:\ChimeraX 1.11.dev202509100058\bin\Lib\threading.py", line 331 in wait
File "E:\ChimeraX 1.11.dev202509100058\bin\Lib\threading.py", line 629 in wait
File "E:\ChimeraX 1.11.dev202509100058\bin\Lib\threading.py", line 1399 in run
File "E:\ChimeraX 1.11.dev202509100058\bin\Lib\threading.py", line 1045 in _bootstrap_inner
File "E:\ChimeraX 1.11.dev202509100058\bin\Lib\threading.py", line 1002 in _bootstrap
Current thread 0x00006e4c (most recent call first):
File "E:\ChimeraX 1.11.dev202509100058\bin\Lib\site-packages\chimerax\ui\gui.py", line 368 in event_loop
File "E:\ChimeraX 1.11.dev202509100058\bin\Lib\site-packages\chimerax\core\__main__.py", line 1064 in init
File "E:\ChimeraX 1.11.dev202509100058\bin\Lib\site-packages\chimerax\core\__main__.py", line 1229 in
File "", line 88 in _run_code
File "", line 198 in _run_module_as_main
Windows fatal exception: access violation
Current thread 0x00006e4c (most recent call first):
File "E:\ChimeraX 1.11.dev202509100058\bin\Lib\site-packages\chimerax\ui\gui.py", line 368 in event_loop
File "E:\ChimeraX 1.11.dev202509100058\bin\Lib\site-packages\chimerax\core\__main__.py", line 1064 in init
File "E:\ChimeraX 1.11.dev202509100058\bin\Lib\site-packages\chimerax\core\__main__.py", line 1229 in
File "", line 88 in _run_code
File "", line 198 in _run_module_as_main
===== Log before crash start =====
> open 7QVP format mmcif fromDatabase pdb
7qvp title:
Human collided disome (di-ribosome) stalled on XBP1 mRNA [more info...]
Chain information for 7qvp #1
---
Chain | Description | UniProt
A4 | mRNA |
A5 | mRNA |
B4 D5 | tRNA P/P |
B5 | tRNA P/E |
CC | tNRA E/E |
L1 L8 | 5.8S ribosomal RNA |
L5 L6 | 28S ribosomal RNA |
L7 L9 | 5S ribosomal RNA |
LA MA | 60S ribosomal protein L8 | A0A8B8VPA8_BALMU 1-257
LB MB | 60S ribosomal protein L3 | RL3_HUMAN 1-403
LC MC | 60S ribosomal protein L4 | RL4_HUMAN 1-427
LD MD | 60S ribosomal protein L5 | RL5_HUMAN 1-297
LE ME | 60S ribosomal protein L6 | RL6_HUMAN 1-288
LF MF | 60S ribosomal protein L7 | RL7_HUMAN 1-248
LG MG | 60S ribosomal protein L7a | RL7A_HUMAN 1-266
LH MH | 60S ribosomal protein L9 | RL9_HUMAN 1-192
LI MI | 60S ribosomal protein L10-like | RL10L_HUMAN 1-214
LJ MJ | 60S ribosomal protein L11 | RL11_HUMAN 1-178
LL ML | 60S ribosomal protein L13 | RL13_HUMAN 1-211
LM MM | 60S ribosomal protein L14 | RL14_HUMAN 1-215
LN MN | 60S ribosomal protein L15 | L8Y0W1_TUPCH 1-204
LO MO | 60S ribosomal protein L13a | RL13A_HUMAN 1-203
LP | 60S ribosomal protein L17 | RL17_HUMAN 1-154
LQ MQ | 60S ribosomal protein L18 | RL18_HUMAN 1-188
LR MR | 60S ribosomal protein L19 | A0A2J8KH59_PANTR 1-196
LS MS | 60S ribosomal protein L18a | RL18A_HUMAN 1-176
LT MT | 60S ribosomal protein L21 | RL21_HUMAN 1-160
LU MU | 60S ribosomal protein L22 | RL22_HUMAN 1-128
LV MV | 60S ribosomal protein L23 | A0A3P9HH38_ORYLA 1-140
LW MW | 60S ribosomal protein L24 | F2X267_AILME 1-157
LX MX | 60S ribosomal protein L23a | RL23A_HUMAN 1-156
LY MY | KOW domain-containing protein | A0A5N3X333_MUNRE 1-145
LZ MZ | 60S ribosomal protein L27 | A0A851LWS6_CORCR 1-136
La Ma | 60S ribosomal protein L27a | RL27A_HUMAN 1-148
Lb Mb | 60S ribosomal protein L29 | RL29_HUMAN 1-159
Lc Mc | 60S ribosomal protein L30 | RL30_HUMAN 1-115
Ld Md | 60S ribosomal protein L31 | G7NZE1_MACFA 1-125
Le Me | 60S ribosomal protein L32 | RL32_HUMAN 1-135
Lf Mf | 60S ribosomal protein L35a | RL35A_HUMAN 1-110
Lg Mg | 60S ribosomal protein L34 | A0A1U7T3M5_CARSF 1-117
Lh Mh | 60S ribosomal protein L35 | RL35_HUMAN 1-123
Li Mi | 60S ribosomal protein L36 | RL36_HUMAN 1-105
Lj Mj | Ribosomal protein L37 | A0A2Y9RW09_TRIMA 1-88
Lk Mk | 60S ribosomal protein L38 | A0A1A7W9T9_9TELE 1-70
Ll Ml | 60S ribosomal protein L39 | A0A7N4PFJ2_SARHA 1-51
Lm Mm | Ubiquitin-60S ribosomal protein L40 | A0A8C8Y9V5_PROSS 1-128
Ln Mn | 60S ribosomal protein L41 | RL41_HUMAN 1-25
Lo Mo | 60S ribosomal protein L36a | J3KQN4_HUMAN 1-106
Lp Mp | 60S ribosomal protein L37a | A0A6I9ZMF9_ACIJB 1-92
Lr Mr | 60S ribosomal protein L28 | RL28_HUMAN 1-137
MP | 60S ribosomal protein L17 | RL17_HUMAN 1-184
RA SA | 40S ribosomal protein SA | RSSA_HUMAN 1-295
RB SB | 40S ribosomal protein S3a | RS3A_HUMAN 1-264
RC SC | 40S ribosomal protein S2 | RS2_HUMAN 1-293
RD SD | 40S ribosomal protein S3 | RS3_HUMAN 1-243
RE SE | 40S ribosomal protein S4, X isoform | RS4X_HUMAN 1-263
RF SF | 40S ribosomal protein S5 | A0A6J0Y1Z7_ODOVR 1-204
RG SG | 40S ribosomal protein S6 | RS6_HUMAN 1-249
RH SH | 40S ribosomal protein S7 | RS7_MOUSE 1-194
RI SI | 40S ribosomal protein S8 | RS8_HUMAN 1-208
RJ SJ | 40S ribosomal protein S9 | A0A6J0B498_VICPA 1-194
RK SK | 40S ribosomal protein S10 | RS10_HUMAN 1-165
RL SL | 40S ribosomal protein S11 | A0A8B8VW69_BALMU 1-158
RN SN | 40S ribosomal protein S13 | A0A663F1C0_AQUCH 1-151
RO SO | 40S ribosomal protein S14 | A0A7L0BEC6_9AVES 1-151
RP SP | 40S ribosomal protein S15 | A0A2K6QL61_RHIRO 1-145
RQ SQ | 40S ribosomal protein S16 | A0A4W2HV66_BOBOX 1-146
RR SR | 40S ribosomal protein S17 | RS17_HUMAN 1-135
RS SS | 40S ribosomal protein S18 | H0WTR0_OTOGA 1-152
RT ST | 40S ribosomal protein S19 | A0A2Y9E7Q1_TRIMA 1-145
RU SU | 40S ribosomal protein S20 | RS20_RAT 1-119
RV SV | 40S ribosomal protein S21 | RS21_HUMAN 1-83
RW SW | 40S ribosomal protein S15a | A0A2K5QKS6_CEBIM 1-130
RX SX | 40S ribosomal protein S23 | A0A340WVW7_LIPVE 1-143
RY SY | 40S ribosomal protein S24 | RS24_HUMAN 1-133
RZ SZ | 40S ribosomal protein S25 | A0A6J3IG71_SAPAP 1-125
Ra Sa | 40S ribosomal protein S26 | A0A6J2NCX2_9CHIR 1-101
Rb Sb | 40S ribosomal protein S27 | A0A7J8BG50_ROUAE 1-84
Rc Sc | 40S ribosomal protein S28 | A0A3M0JHZ8_HIRRU 1-69
Rd Sd | 40S ribosomal protein S29 | A0A2J8WKD7_PONAB 1-56
Re Se | 40S ribosomal protein S30 | A0A2K6U587_SAIBB 1-59 74-132
Rf | 40S ribosomal protein S12 | A0A671DUR2_RHIFE 1-132
Rg Sg | Receptor of activated protein C kinase 1 | A0A2K6K8B0_RHIBE 1-317
Rh | Ubiquitin-40S ribosomal protein S27a | A0A8C0T835_CANLF -4-151
S2 S3 | 18S ribosomal RNA |
> select /D5:1-76
1559 atoms, 1741 bonds, 75 pseudobonds, 73 residues, 3 models selected
> select /A5:42-52
220 atoms, 241 bonds, 11 residues, 1 model selected
> select /A5:42-52
220 atoms, 241 bonds, 11 residues, 1 model selected
> ui tool show "Color Actions"
> color sel #a9ffa9ff
> color sel #aaffa9ff
> color sel #a8ffa7ff
> color sel #a7ffa6ff
> color sel #a4ffa2ff
> color sel #9eff9cff
> color sel #94ff98ff
> color sel #93ff97ff
> color sel #91ff8fff
> color sel #9bff85ff
> color sel #b0ff7cff
> color sel #d5ff74ff
> color sel #daff73ff
> color sel #deff72ff
> color sel #e5ff6fff
> color sel #f0ff6cff
> color sel #fdff6aff
> color sel #ffff6aff
> color sel #ffff6bff
> color sel #ffff6eff
> color sel #fdff6eff
> color sel #fdff6fff
> color sel #fdff70ff
> color sel #fdff73ff
> color sel #fdff74ff
> color sel #fdff75ff
> color sel yellow
> color sel coral
> select /D5:1-76
1559 atoms, 1741 bonds, 75 pseudobonds, 73 residues, 3 models selected
> color sel coral
> select /B5:1-75
1604 atoms, 1795 bonds, 77 pseudobonds, 75 residues, 2 models selected
> select /CC:1-75
1589 atoms, 1773 bonds, 84 pseudobonds, 75 residues, 2 models selected
> select /B5:1-75
1604 atoms, 1795 bonds, 77 pseudobonds, 75 residues, 2 models selected
> color sel coral
> select /L8:1-156
3314 atoms, 3701 bonds, 85 pseudobonds, 156 residues, 2 models selected
> select /L8:1-156
3314 atoms, 3701 bonds, 85 pseudobonds, 156 residues, 2 models selected
> select /L1:1-156
3314 atoms, 3701 bonds, 89 pseudobonds, 156 residues, 2 models selected
> color sel coral
> select /L5:1-5069
77405 atoms, 86579 bonds, 3512 pseudobonds, 3611 residues, 3 models selected
> select /L6:1-5069
76565 atoms, 85637 bonds, 3530 pseudobonds, 3572 residues, 3 models selected
> color sel coral
> select /L7:1-120
2558 atoms, 2858 bonds, 125 pseudobonds, 120 residues, 2 models selected
> select /L9:1-120
2558 atoms, 2858 bonds, 133 pseudobonds, 120 residues, 2 models selected
> color sel coral
> select /LA:2-249
1898 atoms, 1936 bonds, 248 residues, 1 model selected
> select /MA:2-249
1886 atoms, 1924 bonds, 248 residues, 1 model selected
> color sel coral
> select /L6:1-5069
76565 atoms, 85637 bonds, 3530 pseudobonds, 3572 residues, 3 models selected
> color sel coral
> select /MA:2-249
1886 atoms, 1924 bonds, 248 residues, 1 model selected
> color sel coral
> select /MB:2-399
3101 atoms, 3168 bonds, 1 pseudobond, 393 residues, 2 models selected
> color sel coral
> select /MC:1-365
2894 atoms, 2948 bonds, 365 residues, 1 model selected
> color sel coral
> select /ME:41-288
1713 atoms, 1747 bonds, 2 pseudobonds, 220 residues, 2 models selected
> color sel coral
> select /MF:24-248
1844 atoms, 1879 bonds, 225 residues, 1 model selected
> color sel coral
> select /MG:28-264
1733 atoms, 1765 bonds, 1 pseudobond, 229 residues, 2 models selected
> color sel coral
> select /MH:1-189
1439 atoms, 1458 bonds, 189 residues, 1 model selected
> color sel coral
> select /MG:28-264
1733 atoms, 1765 bonds, 1 pseudobond, 229 residues, 2 models selected
> color sel coral
> select /MH:1-189
1439 atoms, 1458 bonds, 189 residues, 1 model selected
> color sel coral
> select /MI:2-214
1581 atoms, 1619 bonds, 1 pseudobond, 203 residues, 2 models selected
> color sel coral
> select /Mm:78-127
393 atoms, 399 bonds, 50 residues, 1 model selected
> color sel coral
> select /MJ:10-176
1226 atoms, 1249 bonds, 167 residues, 1 model selected
> color sel coral
> select /ML:2-205
1580 atoms, 1611 bonds, 204 residues, 1 model selected
> color sel coral
> select /MM:2-137
1097 atoms, 1119 bonds, 136 residues, 1 model selected
> color sel coral
> select /MN:2-204
1693 atoms, 1738 bonds, 203 residues, 1 model selected
> color sel coral
> select /MO:3-203
1613 atoms, 1645 bonds, 201 residues, 1 model selected
> color sel coral
> select /MO:3-203
1613 atoms, 1645 bonds, 201 residues, 1 model selected
> select /MQ:2-188
1493 atoms, 1517 bonds, 187 residues, 1 model selected
> select /MN:2-204
1693 atoms, 1738 bonds, 203 residues, 1 model selected
> select /MM:2-137
1097 atoms, 1119 bonds, 136 residues, 1 model selected
> select /MN:2-204
1693 atoms, 1738 bonds, 203 residues, 1 model selected
> color sel coral
> select /MO:3-203
1613 atoms, 1645 bonds, 201 residues, 1 model selected
> color sel coral
> log metadata #1
> select /LP:2-154
1234 atoms, 1260 bonds, 153 residues, 1 model selected
> select /MQ:2-188
1493 atoms, 1517 bonds, 187 residues, 1 model selected
> color sel coral
> select /MQ:2-188
1493 atoms, 1517 bonds, 187 residues, 1 model selected
> color sel coral
> select /MR:2-176
1412 atoms, 1428 bonds, 175 residues, 1 model selected
> color sel coral
> select /MS:2-176
1436 atoms, 1476 bonds, 175 residues, 1 model selected
> color sel coral
> select /MT:2-160
1268 atoms, 1296 bonds, 159 residues, 1 model selected
> color sel coral
> select /MU:17-117
768 atoms, 782 bonds, 101 residues, 1 model selected
> color sel coral
> select /MV:10-140
954 atoms, 968 bonds, 131 residues, 1 model selected
> color sel coral
> select /MV:10-140
954 atoms, 968 bonds, 131 residues, 1 model selected
> color sel coral
> select /MW:2-121
784 atoms, 798 bonds, 1 pseudobond, 115 residues, 2 models selected
> select /MW:2-121
784 atoms, 798 bonds, 1 pseudobond, 115 residues, 2 models selected
> select /MV:10-140
954 atoms, 968 bonds, 131 residues, 1 model selected
> select /MW:2-121
784 atoms, 798 bonds, 1 pseudobond, 115 residues, 2 models selected
> color sel coral
> select /MX:37-156
950 atoms, 967 bonds, 120 residues, 1 model selected
> color sel coral
> select /MY:1-134
1084 atoms, 1101 bonds, 134 residues, 1 model selected
> color sel coral
> select /MZ:2-136
1082 atoms, 1105 bonds, 135 residues, 1 model selected
> color sel coral
> select /Ma:2-148
1145 atoms, 1173 bonds, 1 pseudobond, 146 residues, 2 models selected
> color sel coral
> select /Ma:2-148
1145 atoms, 1173 bonds, 1 pseudobond, 146 residues, 2 models selected
> select /Mb:2-64
499 atoms, 509 bonds, 63 residues, 1 model selected
> color sel coral
> select /Mc:14-106
716 atoms, 726 bonds, 93 residues, 1 model selected
> color sel coral
> select /Md:18-124
856 atoms, 871 bonds, 107 residues, 1 model selected
> color sel coral
> select /Me:3-129
1045 atoms, 1063 bonds, 127 residues, 1 model selected
> color sel coral
> select /Me:3-129
1045 atoms, 1063 bonds, 127 residues, 1 model selected
> select /Mf:2-110
864 atoms, 883 bonds, 109 residues, 1 model selected
> select /Me:3-129
1045 atoms, 1063 bonds, 127 residues, 1 model selected
> color sel coral
> select /Me:3-129
1045 atoms, 1063 bonds, 127 residues, 1 model selected
> select /Me:3-129
1045 atoms, 1063 bonds, 127 residues, 1 model selected
> select /Mf:2-110
864 atoms, 883 bonds, 109 residues, 1 model selected
> select /Me:3-129
1045 atoms, 1063 bonds, 127 residues, 1 model selected
> color sel coral
> select /Mf:2-110
864 atoms, 883 bonds, 109 residues, 1 model selected
> color sel coral
> select /Mg:2-111
851 atoms, 861 bonds, 110 residues, 1 model selected
> color sel coral
> select /Mh:3-123
975 atoms, 983 bonds, 121 residues, 1 model selected
> color sel coral
> select /Mi:2-102
797 atoms, 808 bonds, 101 residues, 1 model selected
> color sel coral
> select /Mj:2-87
701 atoms, 716 bonds, 86 residues, 1 model selected
> color sel coral
> select /Mk:2-70
528 atoms, 534 bonds, 69 residues, 1 model selected
> color sel coral
> select /Ml:2-51
440 atoms, 450 bonds, 50 residues, 1 model selected
> color sel coral
> select /Mm:78-127
393 atoms, 399 bonds, 50 residues, 1 model selected
> color sel coral
> select /Mm:78-127
393 atoms, 399 bonds, 50 residues, 1 model selected
> color sel coral
> select /Mn:1-24
230 atoms, 231 bonds, 24 residues, 1 model selected
> color sel saddle brown
> color sel coral
> select /Mo:2-99
774 atoms, 787 bonds, 98 residues, 1 model selected
> color sel coral
> select /Mp:2-92
689 atoms, 699 bonds, 91 residues, 1 model selected
> select /Mp:2-92
689 atoms, 699 bonds, 91 residues, 1 model selected
> color sel coral
> select /Mp:2-92
689 atoms, 699 bonds, 91 residues, 1 model selected
> color sel coral
> color sel medium spring green
> color sel coral
> select /Mr:2-126
982 atoms, 997 bonds, 125 residues, 1 model selected
> color sel coral
> select add /MP:110@N
983 atoms, 997 bonds, 126 residues, 1 model selected
> select up
990 atoms, 1004 bonds, 126 residues, 1 model selected
> select up
1023 atoms, 1037 bonds, 131 residues, 1 model selected
> select up
2185 atoms, 2226 bonds, 278 residues, 1 model selected
> select up
417512 atoms, 449690 bonds, 33648 residues, 1 model selected
> select subtract /MP:152@CD
417511 atoms, 449687 bonds, 33648 residues, 1 model selected
> select clear
> select add /MP:108@CG
1 atom, 1 residue, 1 model selected
> select up
8 atoms, 7 bonds, 1 residue, 1 model selected
> select up
41 atoms, 40 bonds, 6 residues, 1 model selected
> select up
1203 atoms, 1229 bonds, 153 residues, 1 model selected
> ui tool show "Color Actions"
> color sel coral
> select add /MD:89@CE
1204 atoms, 1229 bonds, 154 residues, 1 model selected
> select up
1212 atoms, 1237 bonds, 154 residues, 1 model selected
> select up
1309 atoms, 1337 bonds, 167 residues, 1 model selected
> select up
3490 atoms, 3562 bonds, 446 residues, 1 model selected
> ui tool show "Color Actions"
> color sel coral
> lighting flat
> select add /SP:58@CA
3491 atoms, 3562 bonds, 447 residues, 1 model selected
> select add /L5:3795@OP2
3492 atoms, 3562 bonds, 448 residues, 1 model selected
> select add /L5:1770@N3
3493 atoms, 3562 bonds, 449 residues, 1 model selected
> select add /LI:181@CD2
3494 atoms, 3562 bonds, 450 residues, 1 model selected
> select add /L7:72@C4'
3495 atoms, 3562 bonds, 451 residues, 1 model selected
> select add /LH:8@OE1
3496 atoms, 3562 bonds, 452 residues, 1 model selected
> select add /L5:914@O3'
3497 atoms, 3562 bonds, 453 residues, 1 model selected
> select add /L5:1967@N1
3498 atoms, 3562 bonds, 454 residues, 1 model selected
> select add /Lm:83@CB
3499 atoms, 3562 bonds, 455 residues, 1 model selected
> select add /LV:131@CG
3500 atoms, 3562 bonds, 456 residues, 1 model selected
> select add /L5:4604@C5'
3501 atoms, 3562 bonds, 457 residues, 1 model selected
> select add /L5:3791@O3'
3502 atoms, 3562 bonds, 458 residues, 1 model selected
> select add /L5:1773@P
3503 atoms, 3562 bonds, 459 residues, 1 model selected
> select subtract /L5:1773@P
3502 atoms, 3562 bonds, 458 residues, 1 model selected
> select add /LJ:175@CD2
3503 atoms, 3562 bonds, 459 residues, 1 model selected
> select add /LD:9@CA
3504 atoms, 3562 bonds, 460 residues, 1 model selected
> select add /L5:1185@OP2
3505 atoms, 3562 bonds, 461 residues, 1 model selected
> select add /L5:1195@O4'
3506 atoms, 3562 bonds, 462 residues, 1 model selected
> select add /L5:729@O3'
3507 atoms, 3562 bonds, 463 residues, 1 model selected
> select add /LC:352@O
3508 atoms, 3562 bonds, 464 residues, 1 model selected
> select add /LE:146@O
3509 atoms, 3562 bonds, 465 residues, 1 model selected
> select add /L5:4889@C2'
3510 atoms, 3562 bonds, 466 residues, 1 model selected
> select add /LO:190@CB
3511 atoms, 3562 bonds, 467 residues, 1 model selected
> select add /LM:133@CB
3512 atoms, 3562 bonds, 468 residues, 1 model selected
> select add /L5:1069@C2
3513 atoms, 3562 bonds, 469 residues, 1 model selected
> select add /LE:100@CD
3514 atoms, 3562 bonds, 470 residues, 1 model selected
> select add /L5:471@C2
3515 atoms, 3562 bonds, 471 residues, 1 model selected
> select add /Lb:60@CB
3516 atoms, 3562 bonds, 472 residues, 1 model selected
> select add /LD:82@OE1
3517 atoms, 3562 bonds, 473 residues, 1 model selected
> select add /LT:122@CB
3518 atoms, 3562 bonds, 474 residues, 1 model selected
> select add /LJ:167@NE2
3519 atoms, 3562 bonds, 475 residues, 1 model selected
> select add /L7:22@C1'
3520 atoms, 3562 bonds, 476 residues, 1 model selected
> select up
3929 atoms, 4012 bonds, 476 residues, 1 model selected
> select up
85661 atoms, 95224 bonds, 4459 residues, 1 model selected
> ui tool show "Color Actions"
> color sel orange
> undo
> clear selection
Unknown command: clear selection
> select clear
> sequence chain #1/L1#1/L8
Alignment identifier is 1
===== Log before crash end =====
Log:
UCSF ChimeraX version: 1.11.dev202509100058 (2025-09-10)
© 2016-2025 Regents of the University of California. All rights reserved.
How to cite UCSF ChimeraX
OpenGL version: 3.3.0 NVIDIA 576.49
OpenGL renderer: NVIDIA GeForce RTX 4060 Laptop GPU/PCIe/SSE2
OpenGL vendor: NVIDIA Corporation
Python: 3.11.9
Locale: zh_CN.cp936
Qt version: PyQt6 6.9.1, Qt 6.9.0
Qt runtime version: 6.9.2
Qt platform: windows
Manufacturer: HP
Model: OMEN by HP Gaming Laptop 16-wf0xxx
OS: Microsoft Windows 11 家庭中文版 (Build 26100)
Memory: 16,858,472,448
MaxProcessMemory: 137,438,953,344
CPU: 32 13th Gen Intel(R) Core(TM) i9-13900HX
OSLanguage: zh-CN
Installed Packages:
alabaster: 1.0.0
appdirs: 1.4.4
asttokens: 3.0.0
babel: 2.17.0
beautifulsoup4: 4.13.5
blockdiag: 3.0.0
blosc2: 3.7.2
build: 1.3.0
certifi: 2025.8.3
cftime: 1.6.4.post1
charset-normalizer: 3.4.3
ChimeraX-AddCharge: 1.5.20
ChimeraX-AddH: 2.2.7
ChimeraX-AlignmentAlgorithms: 2.0.2
ChimeraX-AlignmentHdrs: 3.6.1
ChimeraX-AlignmentMatrices: 2.1
ChimeraX-Alignments: 3.0.2
ChimeraX-AlphaFold: 1.0.1
ChimeraX-AltlocExplorer: 1.1.2
ChimeraX-AmberInfo: 1.0
ChimeraX-Aniso: 1.3.2
ChimeraX-Arrays: 1.1
ChimeraX-Atomic: 1.60.16
ChimeraX-AtomicLibrary: 14.2
ChimeraX-AtomSearch: 2.0.1
ChimeraX-AxesPlanes: 2.4
ChimeraX-BasicActions: 1.1.3
ChimeraX-BILD: 1.0
ChimeraX-BlastProtein: 3.0.0
ChimeraX-Boltz: 1.1
ChimeraX-BondRot: 2.0.4
ChimeraX-BugReporter: 1.0.2
ChimeraX-BuildStructure: 2.13.1
ChimeraX-Bumps: 1.0
ChimeraX-BundleBuilder: 1.6.0
ChimeraX-ButtonPanel: 1.0.1
ChimeraX-CageBuilder: 1.0.1
ChimeraX-CellPack: 1.0
ChimeraX-Centroids: 1.4
ChimeraX-ChangeChains: 1.1
ChimeraX-CheckWaters: 1.5
ChimeraX-ChemGroup: 2.0.2
ChimeraX-Clashes: 2.3
ChimeraX-ColorActions: 1.0.5
ChimeraX-ColorGlobe: 1.0
ChimeraX-ColorKey: 1.5.8
ChimeraX-CommandLine: 1.3.0
ChimeraX-ConnectStructure: 2.0.1
ChimeraX-Contacts: 1.0.1
ChimeraX-Core: 1.11.dev202509100058
ChimeraX-CoreFormats: 1.2
ChimeraX-coulombic: 1.4.5
ChimeraX-Crosslinks: 1.0
ChimeraX-Crystal: 1.0
ChimeraX-CrystalContacts: 1.0.1
ChimeraX-DataFormats: 1.2.4
ChimeraX-Dicom: 1.2.7
ChimeraX-DistMonitor: 1.4.2
ChimeraX-DockPrep: 1.1.4
ChimeraX-Dssp: 2.0
ChimeraX-EMDB-SFF: 1.0
ChimeraX-ESMFold: 1.0
ChimeraX-FileHistory: 1.0.1
ChimeraX-FunctionKey: 1.0.1
ChimeraX-Geometry: 1.3
ChimeraX-gltf: 1.0
ChimeraX-Graphics: 1.4.1
ChimeraX-Hbonds: 2.5.3
ChimeraX-Help: 1.3
ChimeraX-HKCage: 1.3
ChimeraX-IHM: 1.1
ChimeraX-ImageFormats: 1.2
ChimeraX-IMOD: 1.0
ChimeraX-IO: 1.0.4
ChimeraX-ItemsInspection: 1.0.1
ChimeraX-IUPAC: 1.0
ChimeraX-KVFinder: 1.7.1
ChimeraX-Label: 1.2
ChimeraX-ListInfo: 1.2.2
ChimeraX-Log: 1.2
ChimeraX-LookingGlass: 1.1
ChimeraX-Maestro: 1.9.2
ChimeraX-Map: 1.3
ChimeraX-MapData: 2.0
ChimeraX-MapEraser: 1.0.1
ChimeraX-MapFilter: 2.0.1
ChimeraX-MapFit: 2.0
ChimeraX-MapSeries: 2.1.1
ChimeraX-Markers: 1.0.1
ChimeraX-Mask: 1.0.2
ChimeraX-MatchMaker: 2.2.2
ChimeraX-MCopy: 1.0
ChimeraX-MDcrds: 2.17.1
ChimeraX-MedicalToolbar: 1.1
ChimeraX-Meeting: 1.0.1
ChimeraX-Minimize: 1.2
ChimeraX-MLP: 1.1.1
ChimeraX-mmCIF: 2.16
ChimeraX-MMTF: 2.2
ChimeraX-ModelArchive: 1.0
ChimeraX-Modeller: 1.5.22
ChimeraX-ModelPanel: 1.5.1
ChimeraX-ModelSeries: 1.0.1
ChimeraX-Mol2: 2.0.3
ChimeraX-Mole: 1.0
ChimeraX-Morph: 1.0.2
ChimeraX-MouseModes: 1.2
ChimeraX-Movie: 1.0.1
ChimeraX-MutationScores: 1.0
ChimeraX-Neuron: 1.0
ChimeraX-Nifti: 1.2
ChimeraX-NMRSTAR: 1.0.2
ChimeraX-NRRD: 1.2
ChimeraX-Nucleotides: 2.0.3
ChimeraX-OpenCommand: 1.15.1
ChimeraX-OrthoPick: 1.0.1
ChimeraX-PDB: 2.7.11
ChimeraX-PDBBio: 1.0.1
ChimeraX-PDBLibrary: 1.0.4
ChimeraX-PDBMatrices: 1.0
ChimeraX-PickBlobs: 1.0.1
ChimeraX-Positions: 1.0
ChimeraX-PresetMgr: 1.1.3
ChimeraX-ProfileGrids: 1.3.1
ChimeraX-PubChem: 2.2
ChimeraX-ReadPbonds: 1.0.1
ChimeraX-Registration: 1.1.2
ChimeraX-RemoteControl: 1.0
ChimeraX-RenderByAttr: 1.6.5
ChimeraX-RenumberResidues: 1.1
ChimeraX-ResidueFit: 1.0.1
ChimeraX-RestServer: 1.3.1
ChimeraX-RNALayout: 1.0
ChimeraX-RotamerLibMgr: 4.0
ChimeraX-RotamerLibsDunbrack: 2.0
ChimeraX-RotamerLibsDynameomics: 2.0
ChimeraX-RotamerLibsRichardson: 2.0
ChimeraX-SaveCommand: 1.5.2
ChimeraX-Scenes: 0.2.1
ChimeraX-SchemeMgr: 1.0
ChimeraX-SDF: 2.0.3
ChimeraX-Segger: 1.0
ChimeraX-Segment: 1.0.1
ChimeraX-Segmentations: 3.5.7
ChimeraX-SelInspector: 1.0
ChimeraX-SeqView: 2.17.2
ChimeraX-Shape: 1.1
ChimeraX-Shell: 1.0.1
ChimeraX-Shortcuts: 1.2.1
ChimeraX-ShowSequences: 1.0.3
ChimeraX-SideView: 1.0.1
ChimeraX-SimilarStructures: 1.0.1
ChimeraX-Smiles: 2.1.2
ChimeraX-SmoothLines: 1.0
ChimeraX-SpaceNavigator: 1.0
ChimeraX-StdCommands: 1.19.1
ChimeraX-STL: 1.0.1
ChimeraX-Storm: 1.0
ChimeraX-StructMeasure: 1.2.1
ChimeraX-Struts: 1.0.1
ChimeraX-Surface: 1.0.1
ChimeraX-SwapAA: 2.0.1
ChimeraX-SwapRes: 2.5.2
ChimeraX-TapeMeasure: 1.0
ChimeraX-TaskManager: 1.0
ChimeraX-Test: 1.0
ChimeraX-Toolbar: 1.2.3
ChimeraX-ToolshedUtils: 1.2.4
ChimeraX-Topography: 1.0
ChimeraX-ToQuest: 1.0
ChimeraX-Tug: 1.0.1
ChimeraX-UI: 1.48.2
ChimeraX-Umap: 1.0
ChimeraX-uniprot: 2.3.1
ChimeraX-UnitCell: 1.0.1
ChimeraX-ViewDock: 1.3.3
ChimeraX-VIPERdb: 1.0
ChimeraX-Vive: 1.1
ChimeraX-VolumeMenu: 1.0.1
ChimeraX-vrml: 1.0
ChimeraX-VTK: 1.0
ChimeraX-WavefrontOBJ: 1.0
ChimeraX-WebCam: 1.0.2
ChimeraX-WebServices: 1.1.5
ChimeraX-Zone: 1.0.1
colorama: 0.4.6
comm: 0.2.3
comtypes: 1.4.11
contourpy: 1.3.3
coverage: 7.10.6
cxservices: 1.2.3
cycler: 0.12.1
Cython: 3.1.3
debugpy: 1.8.16
decorator: 5.2.1
docutils: 0.21.2
executing: 2.2.1
filelock: 3.19.1
fonttools: 4.59.2
funcparserlib: 2.0.0a0
glfw: 2.9.0
grako: 3.16.5
h5py: 3.14.0
html2text: 2025.4.15
idna: 3.10
ihm: 2.2
imagecodecs: 2024.6.1
imagesize: 1.4.1
iniconfig: 2.1.0
ipykernel: 6.30.1
ipython: 9.5.0
ipython_pygments_lexers: 1.1.1
ipywidgets: 8.1.7
jedi: 0.19.2
Jinja2: 3.1.6
jupyter_client: 8.6.3
jupyter_core: 5.8.1
jupyterlab_widgets: 3.0.15
kiwisolver: 1.4.9
line_profiler: 5.0.0
lxml: 6.0.1
lz4: 4.3.2
Markdown: 3.8.2
MarkupSafe: 3.0.2
matplotlib: 3.10.5
matplotlib-inline: 0.1.7
msgpack: 1.1.1
ndindex: 1.10.0
nest-asyncio: 1.6.0
netCDF4: 1.6.5
networkx: 3.3
nibabel: 5.2.0
nptyping: 2.5.0
numexpr: 2.11.0
numpy: 1.26.4
nvidia-nvjitlink-cu12: 12.9.86
OpenMM: 8.2.0
OpenMM-CUDA-12: 8.2.0
openvr: 1.26.701
packaging: 25.0
ParmEd: 4.2.2
parso: 0.8.5
pep517: 0.13.1
pickleshare: 0.7.5
pillow: 11.3.0
pip: 25.2
pkginfo: 1.12.1.2
platformdirs: 4.4.0
pluggy: 1.6.0
prompt_toolkit: 3.0.52
psutil: 7.0.0
pure_eval: 0.2.3
py-cpuinfo: 9.0.0
pybind11: 3.0.1
pycollada: 0.8
pydicom: 2.4.4
Pygments: 2.18.0
pynmrstar: 3.3.5
pynrrd: 1.0.0
PyOpenGL: 3.1.10
PyOpenGL-accelerate: 3.1.10
pyopenxr: 1.1.4501
pyparsing: 3.2.3
pyproject_hooks: 1.2.0
PyQt6-commercial: 6.9.1
PyQt6-Qt6: 6.9.2
PyQt6-WebEngine-commercial: 6.9.0
PyQt6-WebEngine-Qt6: 6.9.2
PyQt6_sip: 13.10.2
pytest: 8.4.2
pytest-cov: 7.0.0
python-dateutil: 2.9.0.post0
pytz: 2025.2
pywin32: 311
pyzmq: 27.1.0
qtconsole: 5.6.1
QtPy: 2.4.3
qtshim: 1.2
RandomWords: 0.4.0
requests: 2.32.4
roman-numerals-py: 3.1.0
scipy: 1.14.0
setuptools: 80.9.0
sfftk-rw: 0.8.1
six: 1.17.0
snowballstemmer: 3.0.1
sortedcontainers: 2.4.0
soupsieve: 2.8
Sphinx: 8.2.3
sphinx-autodoc-typehints: 3.2.0
sphinxcontrib-applehelp: 2.0.0
sphinxcontrib-blockdiag: 3.0.0
sphinxcontrib-devhelp: 2.0.0
sphinxcontrib-htmlhelp: 2.1.0
sphinxcontrib-jsmath: 1.0.1
sphinxcontrib-qthelp: 2.0.0
sphinxcontrib-serializinghtml: 2.0.0
stack-data: 0.6.3
superqt: 0.7.6
tables: 3.10.2
tcia_utils: 1.5.1
tifffile: 2025.3.13
tinyarray: 1.2.5
tornado: 6.5.2
traitlets: 5.14.3
typing_extensions: 4.15.0
tzdata: 2025.2
urllib3: 2.5.0
wcwidth: 0.2.13
webcolors: 24.11.1
wheel: 0.45.1
wheel-filename: 1.4.2
widgetsnbextension: 4.0.14
WMI: 1.5.1
Change History (2)
comment:1 by , 3 months ago
| Cc: | added |
|---|---|
| Component: | Unassigned → Core |
| Owner: | set to |
| Platform: | → all |
| Project: | → ChimeraX |
| Status: | new → accepted |
| Summary: | ChimeraX bug report submission → Crash in event loop |
comment:2 by , 3 months ago
| Resolution: | → can't reproduce |
|---|---|
| Status: | accepted → closed |
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