Opened 2 months ago

Closed 2 months ago

#18758 closed defect (duplicate)

'MRCGrid' object has no attribute 'dicom_data'

Reported by: chimerax-bug-report@… Owned by: Zach Pearson
Priority: normal Milestone:
Component: DICOM Version:
Keywords: Cc:
Blocked By: Blocking:
Notify when closed: Platform: all
Project: ChimeraX

Description

The following bug report has been submitted:
Platform:        Windows-10-10.0.26100
ChimeraX Version: 1.9 (2024-12-11 19:11:19 UTC)
Description
Replace this text with list of actions that caused this problem to occur

Log:
Startup Messages  
---  
note | available bundle cache has not been initialized yet  
  
UCSF ChimeraX version: 1.9 (2024-12-11)  
© 2016-2024 Regents of the University of California. All rights reserved.  
How to cite UCSF ChimeraX  

> open C:/Users/ru19784/Downloads/cryosparc_P101_J1514_011_volume_map.mrc

Opened cryosparc_P101_J1514_011_volume_map.mrc as #1, grid size 300,300,300,
pixel 1.07, shown at level 0.0185, step 2, values float32  

> volume #1 step 1

> volume #1 level 0.09439

> surface dust #1 size 10.7

> volume #1 level 0.11

> open C:/Users/ru19784/Downloads/3duz.pdb

3duz.pdb title:  
Crystal structure of the postfusion form of baculovirus fusion protein GP64
[more info...]  
  
Chain information for 3duz.pdb #2  
---  
Chain | Description | UniProt  
A | GP67 | VP67_NPVAC 21-499  
  
Non-standard residues in 3duz.pdb #2  
---  
HG — mercury (II) ion  
  

> hide #!1 models

> close #2

QWindowsNativeFileDialogBase::shellItem : Unhandled scheme: "data"  

> open C:/Users/ru19784/Downloads/3duz.cif

3duz.cif title:  
Crystal structure of the postfusion form of baculovirus fusion protein GP64
[more info...]  
  
Chain information for 3duz.cif #2  
---  
Chain | Description | UniProt  
A | Major envelope glycoprotein | VP67_NPVAC 21-499  
  
Non-standard residues in 3duz.cif #2  
---  
HG — mercury (II) ion  
  
3duz.cif mmCIF Assemblies  
---  
1| author_and_software_defined_assembly  
  

> close #2

QWindowsNativeFileDialogBase::shellItem : Unhandled scheme: "data"  

> open C:/Users/ru19784/Downloads/3duz.pdb

3duz.pdb title:  
Crystal structure of the postfusion form of baculovirus fusion protein GP64
[more info...]  
  
Chain information for 3duz.pdb #2  
---  
Chain | Description | UniProt  
A | GP67 | VP67_NPVAC 21-499  
  
Non-standard residues in 3duz.pdb #2  
---  
HG — mercury (II) ion  
  

> close #2

QWindowsNativeFileDialogBase::shellItem : Unhandled scheme: "data"  

> open C:/Users/ru19784/Downloads/3duz.pdb1/3duz.pdb1

3duz.pdb1 title:  
Crystal structure of the postfusion form of baculovirus fusion protein GP64
[more info...]  
  
Chain information for 3duz.pdb1  
---  
Chain | Description  
2.1/A | No description available  
2.2/A 2.3/A | No description available  
  

> show #!1 models

> select add #2

10095 atoms, 10275 bonds, 10 pseudobonds, 1269 residues, 9 models selected  

> ui mousemode right "translate selected models"

> view matrix models #2,1,0,0,214.47,0,1,0,121.72,0,0,1,108.2

> view matrix models #2,1,0,0,216.57,0,1,0,134.63,0,0,1,110.83

> view matrix models #2,1,0,0,204.16,0,1,0,134.51,0,0,1,109.84

> ui mousemode right "rotate selected models"

> view matrix models
> #2,0.99545,0.088704,-0.034774,203.73,-0.086379,0.99424,0.063463,127.4,0.040203,-0.06017,0.99738,113.19

> ui mousemode right "translate selected models"

> view matrix models
> #2,0.99545,0.088704,-0.034774,206.91,-0.086379,0.99424,0.063463,128.15,0.040203,-0.06017,0.99738,111.23

Fit in map shortcut requires 1 displayed atomic model and 1 map or two maps,
got 3 atomic models, 1 maps.  

> hide #!2.2 models

> hide #!2.3 models

> select subtract #2

Nothing selected  

> hide #!2 models

Fit in map shortcut requires 1 displayed atomic model and 1 map or two maps,
got 0 atomic models, 1 maps.  

> show #!2 models

> show #!2.2 models

> hide #!2.1 models

> fitmap #2.2 inMap #1

Fit molecule 3duz.pdb1 (#2.2) to map cryosparc_P101_J1514_011_volume_map.mrc
(#1) using 3365 atoms  
average map value = 0.2653, steps = 92  
shifted from previous position = 4.11  
rotated from previous position = 5.68 degrees  
atoms outside contour = 449, contour level = 0.11001  
  
Position of 3duz.pdb1 (#2.2) relative to
cryosparc_P101_J1514_011_volume_map.mrc (#1) coordinates:  
Matrix rotation and translation  
0.99615070 -0.03702755 0.07945282 -7.33244807  
0.04065954 0.99817752 -0.04459204 4.67023584  
-0.07765689 0.04765091 0.99584075 -4.44441896  
Axis 0.46573388 0.79324561 0.39224144  
Axis point -54.23508682 0.00000000 81.13852655  
Rotation angle (degrees) 5.68329760  
Shift along axis -1.45361070  
  

> hide #!2.2 models

> show #!2.3 models

> fitmap #2.3 inMap #1

Fit molecule 3duz.pdb1 (#2.3) to map cryosparc_P101_J1514_011_volume_map.mrc
(#1) using 3365 atoms  
average map value = 0.2752, steps = 76  
shifted from previous position = 3.4  
rotated from previous position = 5.37 degrees  
atoms outside contour = 395, contour level = 0.11001  
  
Position of 3duz.pdb1 (#2.3) relative to
cryosparc_P101_J1514_011_volume_map.mrc (#1) coordinates:  
Matrix rotation and translation  
0.99649802 -0.02659525 0.07927415 -7.51429227  
0.02990249 0.99871864 -0.04082793 4.03297905  
-0.07808674 0.04305545 0.99601641 -4.49658978  
Axis 0.44843404 0.84123913 0.30203251  
Axis point -56.74306043 0.00000000 84.72980684  
Rotation angle (degrees) 5.36667384  
Shift along axis -1.33508099  
  

> hide #!1 models

> show #!2.1 models

> show #!2.2 models

> show #!1 models

> hide #!2.2 models

> hide #!2.1 models

> show #!2.1 models

> show #!2.2 models

> hide #!2.2 models

> hide #!2.3 models

> select add #2.1

3365 atoms, 3429 bonds, 6 pseudobonds, 423 residues, 4 models selected  

> select add #1

3365 atoms, 3429 bonds, 6 pseudobonds, 423 residues, 6 models selected  

> fitmap #2.1 inMap #1

Fit molecule 3duz.pdb1 (#2.1) to map cryosparc_P101_J1514_011_volume_map.mrc
(#1) using 3365 atoms  
average map value = 0.272, steps = 88  
shifted from previous position = 3.69  
rotated from previous position = 5.52 degrees  
atoms outside contour = 398, contour level = 0.11001  
  
Position of 3duz.pdb1 (#2.1) relative to
cryosparc_P101_J1514_011_volume_map.mrc (#1) coordinates:  
Matrix rotation and translation  
0.99627947 -0.02795875 0.08152010 -7.35644208  
0.03141714 0.99864635 -0.04145408 4.00259773  
-0.08025075 0.04386097 0.99580923 -4.51577028  
Axis 0.44368797 0.84130269 0.30878921  
Axis point -55.51649421 0.00000000 80.68064721  
Rotation angle (degrees) 5.51711424  
Shift along axis -1.29098976  
  

> select subtract #2.1

2 models selected  

> show #!2.2 models

> show #!2.3 models

> hide #!1 models

> show #!1 models

> transparency #1.1 50

> select subtract #1

Nothing selected  

> volume #1 level 0.139

> volume #1 level 0.1412

> volume #1 level 0.09662

> volume #1 level 0.07654

> hide #!2.2 models

> show #!2.2 models

> hide #!2.1 models

> hide #!2.3 models

> transparency #1#2.2#!2 0

> volume #1 level 0.1747

> volume #1 level 0.1256

> volume #1 level 0.1769

> open "C:/Users/ru19784/Downloads/cryosparc_P101_J1497_class_00_00122_volume
> (1).mrc"

Opened cryosparc_P101_J1497_class_00_00122_volume (1).mrc as #3, grid size
128,128,128, pixel 2.51, shown at level 0.112, step 1, values float32  

> volume #3 level 0.2228

> volume #3 level 0.3019

> open "C:/Users/ru19784/Downloads/cryosparc_P101_J1497_class_01_00122_volume
> (1).mrc"

Opened cryosparc_P101_J1497_class_01_00122_volume (1).mrc as #4, grid size
128,128,128, pixel 2.51, shown at level 0.119, step 1, values float32  

> volume #4 level 0.2256

> volume #4 level 0.2849

> volume #4 level 0.3661

> hide #!2 models

> volume #4 level 0.416

> volume #3 level 0.3398

> volume #4 level 0.4254

> volume #3 level 0.5231

> volume #1 level 0.2171

> close #1

> close #3

> close #4

> close

> open C:/Users/ru19784/Downloads/cryosparc_P101_J1522_009_volume_map.mrc

Opened cryosparc_P101_J1522_009_volume_map.mrc as #1, grid size 300,300,300,
pixel 1.07, shown at level 0.0196, step 2, values float32  

> volume #1 step 1

> volume #1 level 0.09177

> surface dust #1 size 10.7

> volume #1 level 0.1414

> volume #1 level 0.1436

> volume #1 level 0.1278

> surface dust #1 size 10.7

> volume #1 level 0.1233

> ui tool show Orthoplanes

Traceback (most recent call last):  
File "C:\Program Files\ChimeraX 1.9\bin\Lib\site-
packages\chimerax\segmentations\ui\orthoplanes.py", line 1580, in
_surfaceChosen  
self._update_position_label_text()  
File "C:\Program Files\ChimeraX 1.9\bin\Lib\site-
packages\chimerax\segmentations\ui\orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
AttributeError: 'MRCGrid' object has no attribute 'dicom_data'  
  
AttributeError: 'MRCGrid' object has no attribute 'dicom_data'  
  
File "C:\Program Files\ChimeraX 1.9\bin\Lib\site-
packages\chimerax\segmentations\ui\orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "C:\Program Files\ChimeraX 1.9\bin\Lib\site-
packages\chimerax\segmentations\ui\orthoplanes.py", line 742, in
_onSliderMoved  
self._update_position_label_text()  
File "C:\Program Files\ChimeraX 1.9\bin\Lib\site-
packages\chimerax\segmentations\ui\orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
AttributeError: 'MRCGrid' object has no attribute 'dicom_data'  
  
AttributeError: 'MRCGrid' object has no attribute 'dicom_data'  
  
File "C:\Program Files\ChimeraX 1.9\bin\Lib\site-
packages\chimerax\segmentations\ui\orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "C:\Program Files\ChimeraX 1.9\bin\Lib\site-
packages\chimerax\segmentations\ui\orthoplanes.py", line 742, in
_onSliderMoved  
self._update_position_label_text()  
File "C:\Program Files\ChimeraX 1.9\bin\Lib\site-
packages\chimerax\segmentations\ui\orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
AttributeError: 'MRCGrid' object has no attribute 'dicom_data'  
  
AttributeError: 'MRCGrid' object has no attribute 'dicom_data'  
  
File "C:\Program Files\ChimeraX 1.9\bin\Lib\site-
packages\chimerax\segmentations\ui\orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "C:\Program Files\ChimeraX 1.9\bin\Lib\site-
packages\chimerax\segmentations\ui\orthoplanes.py", line 742, in
_onSliderMoved  
self._update_position_label_text()  
File "C:\Program Files\ChimeraX 1.9\bin\Lib\site-
packages\chimerax\segmentations\ui\orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
AttributeError: 'MRCGrid' object has no attribute 'dicom_data'  
  
AttributeError: 'MRCGrid' object has no attribute 'dicom_data'  
  
File "C:\Program Files\ChimeraX 1.9\bin\Lib\site-
packages\chimerax\segmentations\ui\orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "C:\Program Files\ChimeraX 1.9\bin\Lib\site-
packages\chimerax\segmentations\ui\orthoplanes.py", line 742, in
_onSliderMoved  
self._update_position_label_text()  
File "C:\Program Files\ChimeraX 1.9\bin\Lib\site-
packages\chimerax\segmentations\ui\orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
AttributeError: 'MRCGrid' object has no attribute 'dicom_data'  
  
AttributeError: 'MRCGrid' object has no attribute 'dicom_data'  
  
File "C:\Program Files\ChimeraX 1.9\bin\Lib\site-
packages\chimerax\segmentations\ui\orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "C:\Program Files\ChimeraX 1.9\bin\Lib\site-
packages\chimerax\segmentations\ui\orthoplanes.py", line 742, in
_onSliderMoved  
self._update_position_label_text()  
File "C:\Program Files\ChimeraX 1.9\bin\Lib\site-
packages\chimerax\segmentations\ui\orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
AttributeError: 'MRCGrid' object has no attribute 'dicom_data'  
  
AttributeError: 'MRCGrid' object has no attribute 'dicom_data'  
  
File "C:\Program Files\ChimeraX 1.9\bin\Lib\site-
packages\chimerax\segmentations\ui\orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "C:\Program Files\ChimeraX 1.9\bin\Lib\site-
packages\chimerax\segmentations\ui\orthoplanes.py", line 742, in
_onSliderMoved  
self._update_position_label_text()  
File "C:\Program Files\ChimeraX 1.9\bin\Lib\site-
packages\chimerax\segmentations\ui\orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
AttributeError: 'MRCGrid' object has no attribute 'dicom_data'  
  
AttributeError: 'MRCGrid' object has no attribute 'dicom_data'  
  
File "C:\Program Files\ChimeraX 1.9\bin\Lib\site-
packages\chimerax\segmentations\ui\orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "C:\Program Files\ChimeraX 1.9\bin\Lib\site-
packages\chimerax\segmentations\ui\orthoplanes.py", line 742, in
_onSliderMoved  
self._update_position_label_text()  
File "C:\Program Files\ChimeraX 1.9\bin\Lib\site-
packages\chimerax\segmentations\ui\orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
AttributeError: 'MRCGrid' object has no attribute 'dicom_data'  
  
AttributeError: 'MRCGrid' object has no attribute 'dicom_data'  
  
File "C:\Program Files\ChimeraX 1.9\bin\Lib\site-
packages\chimerax\segmentations\ui\orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "C:\Program Files\ChimeraX 1.9\bin\Lib\site-
packages\chimerax\segmentations\ui\orthoplanes.py", line 742, in
_onSliderMoved  
self._update_position_label_text()  
File "C:\Program Files\ChimeraX 1.9\bin\Lib\site-
packages\chimerax\segmentations\ui\orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
AttributeError: 'MRCGrid' object has no attribute 'dicom_data'  
  
AttributeError: 'MRCGrid' object has no attribute 'dicom_data'  
  
File "C:\Program Files\ChimeraX 1.9\bin\Lib\site-
packages\chimerax\segmentations\ui\orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "C:\Program Files\ChimeraX 1.9\bin\Lib\site-
packages\chimerax\segmentations\ui\orthoplanes.py", line 742, in
_onSliderMoved  
self._update_position_label_text()  
File "C:\Program Files\ChimeraX 1.9\bin\Lib\site-
packages\chimerax\segmentations\ui\orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
AttributeError: 'MRCGrid' object has no attribute 'dicom_data'  
  
AttributeError: 'MRCGrid' object has no attribute 'dicom_data'  
  
File "C:\Program Files\ChimeraX 1.9\bin\Lib\site-
packages\chimerax\segmentations\ui\orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "C:\Program Files\ChimeraX 1.9\bin\Lib\site-
packages\chimerax\segmentations\ui\orthoplanes.py", line 742, in
_onSliderMoved  
self._update_position_label_text()  
File "C:\Program Files\ChimeraX 1.9\bin\Lib\site-
packages\chimerax\segmentations\ui\orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
AttributeError: 'MRCGrid' object has no attribute 'dicom_data'  
  
AttributeError: 'MRCGrid' object has no attribute 'dicom_data'  
  
File "C:\Program Files\ChimeraX 1.9\bin\Lib\site-
packages\chimerax\segmentations\ui\orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "C:\Program Files\ChimeraX 1.9\bin\Lib\site-
packages\chimerax\segmentations\ui\orthoplanes.py", line 742, in
_onSliderMoved  
self._update_position_label_text()  
File "C:\Program Files\ChimeraX 1.9\bin\Lib\site-
packages\chimerax\segmentations\ui\orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
AttributeError: 'MRCGrid' object has no attribute 'dicom_data'  
  
AttributeError: 'MRCGrid' object has no attribute 'dicom_data'  
  
File "C:\Program Files\ChimeraX 1.9\bin\Lib\site-
packages\chimerax\segmentations\ui\orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "C:\Program Files\ChimeraX 1.9\bin\Lib\site-
packages\chimerax\segmentations\ui\orthoplanes.py", line 742, in
_onSliderMoved  
self._update_position_label_text()  
File "C:\Program Files\ChimeraX 1.9\bin\Lib\site-
packages\chimerax\segmentations\ui\orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
AttributeError: 'MRCGrid' object has no attribute 'dicom_data'  
  
AttributeError: 'MRCGrid' object has no attribute 'dicom_data'  
  
File "C:\Program Files\ChimeraX 1.9\bin\Lib\site-
packages\chimerax\segmentations\ui\orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "C:\Program Files\ChimeraX 1.9\bin\Lib\site-
packages\chimerax\segmentations\ui\orthoplanes.py", line 742, in
_onSliderMoved  
self._update_position_label_text()  
File "C:\Program Files\ChimeraX 1.9\bin\Lib\site-
packages\chimerax\segmentations\ui\orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
AttributeError: 'MRCGrid' object has no attribute 'dicom_data'  
  
AttributeError: 'MRCGrid' object has no attribute 'dicom_data'  
  
File "C:\Program Files\ChimeraX 1.9\bin\Lib\site-
packages\chimerax\segmentations\ui\orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "C:\Program Files\ChimeraX 1.9\bin\Lib\site-
packages\chimerax\segmentations\ui\orthoplanes.py", line 742, in
_onSliderMoved  
self._update_position_label_text()  
File "C:\Program Files\ChimeraX 1.9\bin\Lib\site-
packages\chimerax\segmentations\ui\orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
AttributeError: 'MRCGrid' object has no attribute 'dicom_data'  
  
AttributeError: 'MRCGrid' object has no attribute 'dicom_data'  
  
File "C:\Program Files\ChimeraX 1.9\bin\Lib\site-
packages\chimerax\segmentations\ui\orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "C:\Program Files\ChimeraX 1.9\bin\Lib\site-
packages\chimerax\segmentations\ui\orthoplanes.py", line 742, in
_onSliderMoved  
self._update_position_label_text()  
File "C:\Program Files\ChimeraX 1.9\bin\Lib\site-
packages\chimerax\segmentations\ui\orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
AttributeError: 'MRCGrid' object has no attribute 'dicom_data'  
  
AttributeError: 'MRCGrid' object has no attribute 'dicom_data'  
  
File "C:\Program Files\ChimeraX 1.9\bin\Lib\site-
packages\chimerax\segmentations\ui\orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "C:\Program Files\ChimeraX 1.9\bin\Lib\site-
packages\chimerax\segmentations\ui\orthoplanes.py", line 742, in
_onSliderMoved  
self._update_position_label_text()  
File "C:\Program Files\ChimeraX 1.9\bin\Lib\site-
packages\chimerax\segmentations\ui\orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
AttributeError: 'MRCGrid' object has no attribute 'dicom_data'  
  
AttributeError: 'MRCGrid' object has no attribute 'dicom_data'  
  
File "C:\Program Files\ChimeraX 1.9\bin\Lib\site-
packages\chimerax\segmentations\ui\orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "C:\Program Files\ChimeraX 1.9\bin\Lib\site-
packages\chimerax\segmentations\ui\orthoplanes.py", line 742, in
_onSliderMoved  
self._update_position_label_text()  
File "C:\Program Files\ChimeraX 1.9\bin\Lib\site-
packages\chimerax\segmentations\ui\orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
AttributeError: 'MRCGrid' object has no attribute 'dicom_data'  
  
AttributeError: 'MRCGrid' object has no attribute 'dicom_data'  
  
File "C:\Program Files\ChimeraX 1.9\bin\Lib\site-
packages\chimerax\segmentations\ui\orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "C:\Program Files\ChimeraX 1.9\bin\Lib\site-
packages\chimerax\segmentations\ui\orthoplanes.py", line 742, in
_onSliderMoved  
self._update_position_label_text()  
File "C:\Program Files\ChimeraX 1.9\bin\Lib\site-
packages\chimerax\segmentations\ui\orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
AttributeError: 'MRCGrid' object has no attribute 'dicom_data'  
  
AttributeError: 'MRCGrid' object has no attribute 'dicom_data'  
  
File "C:\Program Files\ChimeraX 1.9\bin\Lib\site-
packages\chimerax\segmentations\ui\orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "C:\Program Files\ChimeraX 1.9\bin\Lib\site-
packages\chimerax\segmentations\ui\orthoplanes.py", line 742, in
_onSliderMoved  
self._update_position_label_text()  
File "C:\Program Files\ChimeraX 1.9\bin\Lib\site-
packages\chimerax\segmentations\ui\orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
AttributeError: 'MRCGrid' object has no attribute 'dicom_data'  
  
AttributeError: 'MRCGrid' object has no attribute 'dicom_data'  
  
File "C:\Program Files\ChimeraX 1.9\bin\Lib\site-
packages\chimerax\segmentations\ui\orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "C:\Program Files\ChimeraX 1.9\bin\Lib\site-
packages\chimerax\segmentations\ui\orthoplanes.py", line 742, in
_onSliderMoved  
self._update_position_label_text()  
File "C:\Program Files\ChimeraX 1.9\bin\Lib\site-
packages\chimerax\segmentations\ui\orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
AttributeError: 'MRCGrid' object has no attribute 'dicom_data'  
  
AttributeError: 'MRCGrid' object has no attribute 'dicom_data'  
  
File "C:\Program Files\ChimeraX 1.9\bin\Lib\site-
packages\chimerax\segmentations\ui\orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "C:\Program Files\ChimeraX 1.9\bin\Lib\site-
packages\chimerax\segmentations\ui\orthoplanes.py", line 742, in
_onSliderMoved  
self._update_position_label_text()  
File "C:\Program Files\ChimeraX 1.9\bin\Lib\site-
packages\chimerax\segmentations\ui\orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
AttributeError: 'MRCGrid' object has no attribute 'dicom_data'  
  
AttributeError: 'MRCGrid' object has no attribute 'dicom_data'  
  
File "C:\Program Files\ChimeraX 1.9\bin\Lib\site-
packages\chimerax\segmentations\ui\orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "C:\Program Files\ChimeraX 1.9\bin\Lib\site-
packages\chimerax\segmentations\ui\orthoplanes.py", line 742, in
_onSliderMoved  
self._update_position_label_text()  
File "C:\Program Files\ChimeraX 1.9\bin\Lib\site-
packages\chimerax\segmentations\ui\orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
AttributeError: 'MRCGrid' object has no attribute 'dicom_data'  
  
AttributeError: 'MRCGrid' object has no attribute 'dicom_data'  
  
File "C:\Program Files\ChimeraX 1.9\bin\Lib\site-
packages\chimerax\segmentations\ui\orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "C:\Program Files\ChimeraX 1.9\bin\Lib\site-
packages\chimerax\segmentations\ui\orthoplanes.py", line 742, in
_onSliderMoved  
self._update_position_label_text()  
File "C:\Program Files\ChimeraX 1.9\bin\Lib\site-
packages\chimerax\segmentations\ui\orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
AttributeError: 'MRCGrid' object has no attribute 'dicom_data'  
  
AttributeError: 'MRCGrid' object has no attribute 'dicom_data'  
  
File "C:\Program Files\ChimeraX 1.9\bin\Lib\site-
packages\chimerax\segmentations\ui\orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "C:\Program Files\ChimeraX 1.9\bin\Lib\site-
packages\chimerax\segmentations\ui\orthoplanes.py", line 742, in
_onSliderMoved  
self._update_position_label_text()  
File "C:\Program Files\ChimeraX 1.9\bin\Lib\site-
packages\chimerax\segmentations\ui\orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
AttributeError: 'MRCGrid' object has no attribute 'dicom_data'  
  
AttributeError: 'MRCGrid' object has no attribute 'dicom_data'  
  
File "C:\Program Files\ChimeraX 1.9\bin\Lib\site-
packages\chimerax\segmentations\ui\orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "C:\Program Files\ChimeraX 1.9\bin\Lib\site-
packages\chimerax\segmentations\ui\orthoplanes.py", line 742, in
_onSliderMoved  
self._update_position_label_text()  
File "C:\Program Files\ChimeraX 1.9\bin\Lib\site-
packages\chimerax\segmentations\ui\orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
AttributeError: 'MRCGrid' object has no attribute 'dicom_data'  
  
AttributeError: 'MRCGrid' object has no attribute 'dicom_data'  
  
File "C:\Program Files\ChimeraX 1.9\bin\Lib\site-
packages\chimerax\segmentations\ui\orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "C:\Program Files\ChimeraX 1.9\bin\Lib\site-
packages\chimerax\segmentations\ui\orthoplanes.py", line 742, in
_onSliderMoved  
self._update_position_label_text()  
File "C:\Program Files\ChimeraX 1.9\bin\Lib\site-
packages\chimerax\segmentations\ui\orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
AttributeError: 'MRCGrid' object has no attribute 'dicom_data'  
  
AttributeError: 'MRCGrid' object has no attribute 'dicom_data'  
  
File "C:\Program Files\ChimeraX 1.9\bin\Lib\site-
packages\chimerax\segmentations\ui\orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "C:\Program Files\ChimeraX 1.9\bin\Lib\site-
packages\chimerax\segmentations\ui\orthoplanes.py", line 742, in
_onSliderMoved  
self._update_position_label_text()  
File "C:\Program Files\ChimeraX 1.9\bin\Lib\site-
packages\chimerax\segmentations\ui\orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
AttributeError: 'MRCGrid' object has no attribute 'dicom_data'  
  
AttributeError: 'MRCGrid' object has no attribute 'dicom_data'  
  
File "C:\Program Files\ChimeraX 1.9\bin\Lib\site-
packages\chimerax\segmentations\ui\orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "C:\Program Files\ChimeraX 1.9\bin\Lib\site-
packages\chimerax\segmentations\ui\orthoplanes.py", line 742, in
_onSliderMoved  
self._update_position_label_text()  
File "C:\Program Files\ChimeraX 1.9\bin\Lib\site-
packages\chimerax\segmentations\ui\orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
AttributeError: 'MRCGrid' object has no attribute 'dicom_data'  
  
AttributeError: 'MRCGrid' object has no attribute 'dicom_data'  
  
File "C:\Program Files\ChimeraX 1.9\bin\Lib\site-
packages\chimerax\segmentations\ui\orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "C:\Program Files\ChimeraX 1.9\bin\Lib\site-
packages\chimerax\segmentations\ui\orthoplanes.py", line 742, in
_onSliderMoved  
self._update_position_label_text()  
File "C:\Program Files\ChimeraX 1.9\bin\Lib\site-
packages\chimerax\segmentations\ui\orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
AttributeError: 'MRCGrid' object has no attribute 'dicom_data'  
  
AttributeError: 'MRCGrid' object has no attribute 'dicom_data'  
  
File "C:\Program Files\ChimeraX 1.9\bin\Lib\site-
packages\chimerax\segmentations\ui\orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
  
See log for complete Python traceback.  
  




OpenGL version: 3.3.0 NVIDIA 560.94
OpenGL renderer: NVIDIA GeForce GT 1030/PCIe/SSE2
OpenGL vendor: NVIDIA Corporation

Python: 3.11.4
Locale: en_GB.cp1252
Qt version: PyQt6 6.7.1, Qt 6.7.1
Qt runtime version: 6.7.3
Qt platform: windows

Manufacturer: Dell Inc.
Model: OptiPlex 5070
OS: Microsoft Windows 11 Enterprise (Build 26100)
Memory: 34,131,009,536
MaxProcessMemory: 137,438,953,344
CPU: 8 Intel(R) Core(TM) i7-9700 CPU @ 3.00GHz
OSLanguage: en-GB

Installed Packages:
    alabaster: 1.0.0
    anyio: 4.7.0
    appdirs: 1.4.4
    asttokens: 3.0.0
    auditwheel: 6.1.0
    autocommand: 2.2.2
    babel: 2.16.0
    backports.tarfile: 1.2.0
    beautifulsoup4: 4.12.3
    blockdiag: 3.0.0
    blosc2: 3.0.0
    build: 1.2.1
    certifi: 2024.8.30
    cftime: 1.6.4.post1
    charset-normalizer: 3.4.0
    ChimeraX-AddCharge: 1.5.18
    ChimeraX-AddH: 2.2.6
    ChimeraX-AlignmentAlgorithms: 2.0.2
    ChimeraX-AlignmentHdrs: 3.5
    ChimeraX-AlignmentMatrices: 2.1
    ChimeraX-Alignments: 2.16.1
    ChimeraX-AlphaFold: 1.0.1
    ChimeraX-AltlocExplorer: 1.1.2
    ChimeraX-AmberInfo: 1.0
    ChimeraX-Arrays: 1.1
    ChimeraX-Atomic: 1.58.8
    ChimeraX-AtomicLibrary: 14.1.11
    ChimeraX-AtomSearch: 2.0.1
    ChimeraX-AxesPlanes: 2.4
    ChimeraX-BasicActions: 1.1.2
    ChimeraX-BILD: 1.0
    ChimeraX-BlastProtein: 3.0.0
    ChimeraX-BondRot: 2.0.4
    ChimeraX-BugReporter: 1.0.1
    ChimeraX-BuildStructure: 2.13.1
    ChimeraX-Bumps: 1.0
    ChimeraX-BundleBuilder: 1.4.0
    ChimeraX-ButtonPanel: 1.0.1
    ChimeraX-CageBuilder: 1.0.1
    ChimeraX-CellPack: 1.0
    ChimeraX-Centroids: 1.4
    ChimeraX-ChangeChains: 1.1
    ChimeraX-CheckWaters: 1.4
    ChimeraX-ChemGroup: 2.0.1
    ChimeraX-Clashes: 2.3
    ChimeraX-Clipper: 0.24.0
    ChimeraX-ColorActions: 1.0.5
    ChimeraX-ColorGlobe: 1.0
    ChimeraX-ColorKey: 1.5.6
    ChimeraX-CommandLine: 1.2.5
    ChimeraX-ConnectStructure: 2.0.1
    ChimeraX-Contacts: 1.0.1
    ChimeraX-Core: 1.9
    ChimeraX-CoreFormats: 1.2
    ChimeraX-coulombic: 1.4.4
    ChimeraX-Crosslinks: 1.0
    ChimeraX-Crystal: 1.0
    ChimeraX-CrystalContacts: 1.0.1
    ChimeraX-DataFormats: 1.2.3
    ChimeraX-Dicom: 1.2.6
    ChimeraX-DistMonitor: 1.4.2
    ChimeraX-DockPrep: 1.1.3
    ChimeraX-Dssp: 2.0
    ChimeraX-EMDB-SFF: 1.0
    ChimeraX-ESMFold: 1.0
    ChimeraX-FileHistory: 1.0.1
    ChimeraX-FunctionKey: 1.0.1
    ChimeraX-Geometry: 1.3
    ChimeraX-gltf: 1.0
    ChimeraX-Graphics: 1.4.1
    ChimeraX-Hbonds: 2.5
    ChimeraX-Help: 1.3
    ChimeraX-HKCage: 1.3
    ChimeraX-IHM: 1.1
    ChimeraX-ImageFormats: 1.2
    ChimeraX-IMOD: 1.0
    ChimeraX-IO: 1.0.3
    ChimeraX-ISOLDE: 1.9
    ChimeraX-ItemsInspection: 1.0.1
    ChimeraX-IUPAC: 1.0
    ChimeraX-KVFinder: 1.2.1
    ChimeraX-Label: 1.1.14
    ChimeraX-ListInfo: 1.2.2
    ChimeraX-Log: 1.2
    ChimeraX-LookingGlass: 1.1
    ChimeraX-Maestro: 1.9.1
    ChimeraX-Map: 1.3
    ChimeraX-MapData: 2.0
    ChimeraX-MapEraser: 1.0.1
    ChimeraX-MapFilter: 2.0.1
    ChimeraX-MapFit: 2.0
    ChimeraX-MapSeries: 2.1.1
    ChimeraX-Markers: 1.0.1
    ChimeraX-Mask: 1.0.2
    ChimeraX-MatchMaker: 2.1.6
    ChimeraX-MCopy: 1.0
    ChimeraX-MDcrds: 2.7.2
    ChimeraX-MedicalToolbar: 1.1
    ChimeraX-Meeting: 1.0.1
    ChimeraX-MLP: 1.1.1
    ChimeraX-mmCIF: 2.14.2
    ChimeraX-MMTF: 2.2
    ChimeraX-ModelArchive: 1.0
    ChimeraX-Modeller: 1.5.18
    ChimeraX-ModelPanel: 1.5
    ChimeraX-ModelSeries: 1.0.1
    ChimeraX-Mol2: 2.0.3
    ChimeraX-Mole: 1.0
    ChimeraX-Morph: 1.0.2
    ChimeraX-MouseModes: 1.2
    ChimeraX-Movie: 1.0
    ChimeraX-MutationScores: 1.0
    ChimeraX-Neuron: 1.0
    ChimeraX-Nifti: 1.2
    ChimeraX-NMRSTAR: 1.0.2
    ChimeraX-NRRD: 1.2
    ChimeraX-Nucleotides: 2.0.3
    ChimeraX-OpenCommand: 1.14
    ChimeraX-OrthoPick: 1.0.1
    ChimeraX-PDB: 2.7.6
    ChimeraX-PDBBio: 1.0.1
    ChimeraX-PDBLibrary: 1.0.4
    ChimeraX-PDBMatrices: 1.0
    ChimeraX-PickBlobs: 1.0.1
    ChimeraX-Positions: 1.0
    ChimeraX-PresetMgr: 1.1.2
    ChimeraX-PubChem: 2.2
    ChimeraX-ReadPbonds: 1.0.1
    ChimeraX-Registration: 1.1.2
    ChimeraX-RemoteControl: 1.0
    ChimeraX-RenderByAttr: 1.6.2
    ChimeraX-RenumberResidues: 1.1
    ChimeraX-ResidueFit: 1.0.1
    ChimeraX-RestServer: 1.3.1
    ChimeraX-RNALayout: 1.0
    ChimeraX-RotamerLibMgr: 4.0
    ChimeraX-RotamerLibsDunbrack: 2.0
    ChimeraX-RotamerLibsDynameomics: 2.0
    ChimeraX-RotamerLibsRichardson: 2.0
    ChimeraX-SaveCommand: 1.5.1
    ChimeraX-SchemeMgr: 1.0
    ChimeraX-SDF: 2.0.2
    ChimeraX-Segger: 1.0
    ChimeraX-Segment: 1.0.1
    ChimeraX-Segmentations: 3.5.6
    ChimeraX-SelInspector: 1.0
    ChimeraX-SeqView: 2.14
    ChimeraX-Shape: 1.0.1
    ChimeraX-Shell: 1.0.1
    ChimeraX-Shortcuts: 1.2.0
    ChimeraX-ShowSequences: 1.0.3
    ChimeraX-SideView: 1.0.1
    ChimeraX-SimilarStructures: 1.0.1
    ChimeraX-Smiles: 2.1.2
    ChimeraX-SmoothLines: 1.0
    ChimeraX-SpaceNavigator: 1.0
    ChimeraX-StdCommands: 1.18.1
    ChimeraX-STL: 1.0.1
    ChimeraX-Storm: 1.0
    ChimeraX-StructMeasure: 1.2.1
    ChimeraX-Struts: 1.0.1
    ChimeraX-Surface: 1.0.1
    ChimeraX-SwapAA: 2.0.1
    ChimeraX-SwapRes: 2.5
    ChimeraX-TapeMeasure: 1.0
    ChimeraX-TaskManager: 1.0
    ChimeraX-Test: 1.0
    ChimeraX-Toolbar: 1.2.3
    ChimeraX-ToolshedUtils: 1.2.4
    ChimeraX-Topography: 1.0
    ChimeraX-ToQuest: 1.0
    ChimeraX-Tug: 1.0.1
    ChimeraX-UI: 1.41
    ChimeraX-Umap: 1.0
    ChimeraX-uniprot: 2.3.1
    ChimeraX-UnitCell: 1.0.1
    ChimeraX-ViewDockX: 1.4.4
    ChimeraX-VIPERdb: 1.0
    ChimeraX-Vive: 1.1
    ChimeraX-VolumeMenu: 1.0.1
    ChimeraX-vrml: 1.0
    ChimeraX-VTK: 1.0
    ChimeraX-WavefrontOBJ: 1.0
    ChimeraX-WebCam: 1.0.2
    ChimeraX-WebServices: 1.1.4
    ChimeraX-Zone: 1.0.1
    colorama: 0.4.6
    comm: 0.2.2
    comtypes: 1.4.5
    contourpy: 1.3.1
    cxservices: 1.2.3
    cycler: 0.12.1
    Cython: 3.0.10
    debugpy: 1.8.9
    decorator: 5.1.1
    docutils: 0.21.2
    executing: 2.1.0
    filelock: 3.15.4
    fonttools: 4.55.3
    funcparserlib: 2.0.0a0
    glfw: 2.8.0
    grako: 3.16.5
    h11: 0.14.0
    h5py: 3.12.1
    html2text: 2024.2.26
    httpcore: 1.0.7
    httpx: 0.28.1
    idna: 3.10
    ihm: 1.3
    imagecodecs: 2024.6.1
    imagesize: 1.4.1
    importlib_metadata: 8.0.0
    importlib_resources: 6.4.0
    inflect: 7.3.1
    ipykernel: 6.29.5
    ipython: 8.26.0
    ipywidgets: 8.1.5
    jaraco.context: 5.3.0
    jaraco.functools: 4.0.1
    jaraco.text: 3.12.1
    jedi: 0.19.1
    Jinja2: 3.1.4
    jupyter_client: 8.6.2
    jupyter_core: 5.7.2
    jupyterlab_widgets: 3.0.13
    kiwisolver: 1.4.7
    line_profiler: 4.1.3
    lxml: 5.2.2
    lz4: 4.3.3
    MarkupSafe: 3.0.2
    matplotlib: 3.9.2
    matplotlib-inline: 0.1.7
    more-itertools: 10.3.0
    msgpack: 1.0.8
    ndindex: 1.9.2
    nest-asyncio: 1.6.0
    netCDF4: 1.6.5
    networkx: 3.3
    nibabel: 5.2.0
    nptyping: 2.5.0
    numexpr: 2.10.2
    numpy: 1.26.4
    openvr: 1.26.701
    ordered-set: 4.1.0
    packaging: 23.2
    packaging: 24.1
    ParmEd: 4.2.2
    parso: 0.8.4
    pep517: 0.13.1
    pillow: 10.4.0
    pip: 24.2
    pkginfo: 1.11.1
    platformdirs: 4.3.6
    platformdirs: 4.2.2
    prompt_toolkit: 3.0.48
    psutil: 6.0.0
    pure_eval: 0.2.3
    py-cpuinfo: 9.0.0
    pycollada: 0.8
    pydicom: 2.4.4
    pyelftools: 0.31
    Pygments: 2.18.0
    pynmrstar: 3.3.4
    pynrrd: 1.0.0
    PyOpenGL: 3.1.7
    PyOpenGL-accelerate: 3.1.7
    pyopenxr: 1.0.3401
    pyparsing: 3.2.0
    pyproject_hooks: 1.2.0
    PyQt6-commercial: 6.7.1
    PyQt6-Qt6: 6.7.3
    PyQt6-WebEngine-commercial: 6.7.0
    PyQt6-WebEngine-Qt6: 6.7.3
    PyQt6-WebEngineSubwheel-Qt6: 6.7.3
    PyQt6_sip: 13.8.0
    python-dateutil: 2.9.0.post0
    pytz: 2024.2
    pywin32: 306
    pyzmq: 26.2.0
    qtconsole: 5.5.2
    QtPy: 2.4.2
    qtshim: 1.0
    RandomWords: 0.4.0
    requests: 2.32.3
    scipy: 1.14.0
    setuptools: 72.1.0
    sfftk-rw: 0.8.1
    six: 1.16.0
    sniffio: 1.3.1
    snowballstemmer: 2.2.0
    sortedcontainers: 2.4.0
    soupsieve: 2.6
    Sphinx: 8.0.2
    sphinx-autodoc-typehints: 2.2.3
    sphinxcontrib-applehelp: 2.0.0
    sphinxcontrib-blockdiag: 3.0.0
    sphinxcontrib-devhelp: 2.0.0
    sphinxcontrib-htmlhelp: 2.1.0
    sphinxcontrib-jsmath: 1.0.1
    sphinxcontrib-qthelp: 2.0.0
    sphinxcontrib-serializinghtml: 2.0.0
    stack-data: 0.6.3
    superqt: 0.6.3
    tables: 3.10.1
    tcia_utils: 1.5.1
    tifffile: 2024.7.24
    tinyarray: 1.2.4
    tomli: 2.0.1
    tornado: 6.4.2
    traitlets: 5.14.3
    typeguard: 4.3.0
    typing_extensions: 4.12.2
    typing_extensions: 4.12.2
    tzdata: 2024.2
    urllib3: 2.2.3
    wcwidth: 0.2.13
    webcolors: 24.6.0
    wheel: 0.43.0
    wheel: 0.43.0
    wheel-filename: 1.4.1
    widgetsnbextension: 4.0.13
    WMI: 1.5.1
    zipp: 3.19.2

Change History (2)

comment:1 by Eric Pettersen, 2 months ago

Component: UnassignedDICOM
Owner: set to Zach Pearson
Platform: all
Project: ChimeraX
Status: newassigned
Summary: ChimeraX bug report submission'MRCGrid' object has no attribute 'dicom_data'

comment:2 by Eric Pettersen, 2 months ago

Resolution: duplicate
Status: assignedclosed
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