![[ChimeraX Issue Tracking System]](/trac/ChimeraX/chrome/site/ChimeraX-icon.svg){kind=icon}
Opened 8 weeks ago
Last modified 8 weeks ago
#18636 assigned defect
Crash deleting a QDockWidget involving QWindowContainer::parentWasChanged
| Reported by: | Owned by: | Tom Goddard | |
|---|---|---|---|
| Priority: | normal | Milestone: | |
| Component: | Window Toolkit | Version: | |
| Keywords: | Cc: | chimera-programmers | |
| Blocked By: | Blocking: | ||
| Notify when closed: | Platform: | all | |
| Project: | ChimeraX |
Description
The following bug report has been submitted:
Platform: macOS-13.7.6-arm64-arm-64bit
ChimeraX Version: 1.11.dev202508050120 (2025-08-05 01:20:22 UTC)
Description
Last time you used ChimeraX it crashed.
Please describe steps that led to the crash here.
Fatal Python error: Segmentation fault
Current thread 0x00000001e5d16140 (most recent call first):
File "/Applications/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/ui/gui.py", line 368 in event_loop
File "/Applications/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/core/__main__.py", line 1058 in init
File "/Applications/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/core/__main__.py", line 1223 in
File "", line 88 in _run_code
File "", line 198 in _run_module_as_main
Extension modules: chimerax.arrays._arrays, numpy.core._multiarray_umath, numpy.core._multiarray_tests, numpy.linalg._umath_linalg, numpy.fft._pocketfft_internal, numpy.random._common, numpy.random.bit_generator, numpy.random._bounded_integers, numpy.random._mt19937, numpy.random.mtrand, numpy.random._philox, numpy.random._pcg64, numpy.random._sfc64, numpy.random._generator, chimerax.geometry._geometry, PyQt6.QtCore, PyQt6.QtGui, PyQt6.QtWidgets, PyQt6.QtNetwork, PyQt6.QtPrintSupport, PyQt6.QtWebChannel, PyQt6.QtWebEngineCore, PyQt6.QtWebEngineWidgets, chimerax.atomic_lib._load_libs, tinyarray, chimerax.atomic.cymol, chimerax.atomic.cytmpl, chimerax.pdb_lib._load_libs, chimerax.surface._surface, chimerax.map._map, psutil._psutil_osx, psutil._psutil_posix, OpenGL_accelerate.errorchecker, OpenGL_accelerate.wrapper, OpenGL_accelerate.formathandler, OpenGL_accelerate.arraydatatype, OpenGL_accelerate.latebind, OpenGL_accelerate.vbo, chimerax.core._mac_util, OpenGL_accelerate.numpy_formathandler, OpenGL_accelerate.nones_formathandler, chimerax.pdb._pdbio, chimerax.atomic._ribbons, chimerax.graphics._graphics, chimerax.mmcif._mmcif, chimerax.mmcif.mmcif, PIL._imaging, PIL._imagingmath, chimerax.alignment_algs._sw, chimerax.dssp._dssp, chimerax.alignment_algs._nw, PyQt6.QtOpenGL, PyQt6.QtOpenGLWidgets (total: 53)
{"app_name":"ChimeraX","timestamp":"2025-08-27 11:58:59.00 +0900","app_version":"1.11.0","slice_uuid":"9cf8124a-d876-34ad-b7ee-c011183ebc15","build_version":"1.11.0.0","platform":1,"bundleID":"edu.ucsf.cgl.ChimeraX","share_with_app_devs":0,"is_first_party":0,"bug_type":"309","os_version":"macOS 13.7.6 (22H625)","roots_installed":0,"name":"ChimeraX","incident_id":"3FB11701-5948-4EE9-8DBA-C8EB5AC4BADD"}
{
"uptime" : 680000,
"procRole" : "Foreground",
"version" : 2,
"userID" : 501,
"deployVersion" : 210,
"modelCode" : "MacBookPro18,3",
"coalitionID" : 29674,
"osVersion" : {
"train" : "macOS 13.7.6",
"build" : "22H625",
"releaseType" : "User"
},
"captureTime" : "2025-08-27 11:58:58.9185 +0900",
"incident" : "3FB11701-5948-4EE9-8DBA-C8EB5AC4BADD",
"pid" : 95382,
"translated" : false,
"cpuType" : "ARM-64",
"roots_installed" : 0,
"bug_type" : "309",
"procLaunch" : "2025-08-27 11:07:27.2068 +0900",
"procStartAbsTime" : 16453697254654,
"procExitAbsTime" : 16527947265952,
"procName" : "ChimeraX",
"procPath" : "\/Applications\/ChimeraX_Daily.app\/Contents\/MacOS\/ChimeraX",
"bundleInfo" : {"CFBundleShortVersionString":"1.11.0","CFBundleVersion":"1.11.0.0","CFBundleIdentifier":"edu.ucsf.cgl.ChimeraX"},
"storeInfo" : {"deviceIdentifierForVendor":"8AE4D722-03D5-56AC-94FD-4E0A154B1F9F","thirdParty":true},
"parentProc" : "launchd",
"parentPid" : 1,
"coalitionName" : "edu.ucsf.cgl.ChimeraX",
"crashReporterKey" : "7A9DCD78-69FC-17A0-A468-9D4666918DF9",
"codeSigningID" : "edu.ucsf.cgl.ChimeraX",
"codeSigningTeamID" : "LWV8X224YF",
"codeSigningFlags" : 570491649,
"codeSigningValidationCategory" : 6,
"codeSigningTrustLevel" : 0,
"wakeTime" : 3342,
"sleepWakeUUID" : "6E47CF51-2710-4CCA-80DC-DAC0616B9F18",
"sip" : "enabled",
"vmRegionInfo" : "0x8 is not in any region. Bytes before following region: 105554055790584\n REGION TYPE START - END [ VSIZE] PRT\/MAX SHRMOD REGION DETAIL\n UNUSED SPACE AT START\n---> \n MALLOC_NANO (reserved) 600038000000-600040000000 [128.0M] rw-\/rwx SM=NUL ...(unallocated)",
"exception" : {"codes":"0x0000000000000001, 0x0000000000000008","rawCodes":[1,8],"type":"EXC_BAD_ACCESS","signal":"SIGSEGV","subtype":"KERN_INVALID_ADDRESS at 0x0000000000000008"},
"termination" : {"flags":0,"code":11,"namespace":"SIGNAL","indicator":"Segmentation fault: 11","byProc":"ChimeraX","byPid":95382},
"vmregioninfo" : "0x8 is not in any region. Bytes before following region: 105554055790584\n REGION TYPE START - END [ VSIZE] PRT\/MAX SHRMOD REGION DETAIL\n UNUSED SPACE AT START\n---> \n MALLOC_NANO (reserved) 600038000000-600040000000 [128.0M] rw-\/rwx SM=NUL ...(unallocated)",
"extMods" : {"caller":{"thread_create":0,"thread_set_state":0,"task_for_pid":0},"system":{"thread_create":0,"thread_set_state":0,"task_for_pid":0},"targeted":{"thread_create":0,"thread_set_state":0,"task_for_pid":0},"warnings":0},
"faultingThread" : 0,
"threads" : [{"triggered":true,"id":8868959,"threadState":{"x":[{"value":0},{"value":0},{"value":1},{"value":5100698264},{"value":80},{"value":100},{"value":105553155960576},{"value":0},{"value":7943189750438470948},{"value":7943189756433253476},{"value":14757395258967641293},{"value":4294967286},{"value":5100698194},{"value":0},{"value":53},{"value":4294967280},{"value":328},{"value":8229206632},{"value":0},{"value":11},{"value":8150671680,"symbolLocation":0,"symbol":"_main_thread"},{"value":259},{"value":8150671904,"symbolLocation":224,"symbol":"_main_thread"},{"value":1},{"value":4391831096,"symbolLocation":0,"symbol":"faulthandler_handlers"},{"value":105553144343712},{"value":268438528},{"value":1},{"value":0}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6655786024},"cpsr":{"value":1073745920},"fp":{"value":5100698336},"sp":{"value":5100698304},"esr":{"value":1442840704,"description":" Address size fault"},"pc":{"value":6655559428,"matchesCrashFrame":1},"far":{"value":0}},"name":"CrBrowserMain","queue":"com.apple.main-thread","frames":[{"imageOffset":38660,"symbol":"__pthread_kill","symbolLocation":8,"imageIndex":132},{"imageOffset":27688,"symbol":"pthread_kill","symbolLocation":288,"imageIndex":133},{"imageOffset":259180,"symbol":"raise","symbolLocation":32,"imageIndex":134},{"imageOffset":2447420,"symbol":"faulthandler_fatal_error","symbolLocation":392,"imageIndex":1},{"imageOffset":14884,"symbol":"_sigtramp","symbolLocation":56,"imageIndex":135},{"imageOffset":486940,"symbol":"QWindowContainer::parentWasChanged(QWidget*)","symbolLocation":84,"imageIndex":49},{"imageOffset":487272,"symbol":"QWindowContainer::parentWasChanged(QWidget*)","symbolLocation":416,"imageIndex":49},{"imageOffset":487272,"symbol":"QWindowContainer::parentWasChanged(QWidget*)","symbolLocation":416,"imageIndex":49},{"imageOffset":487272,"symbol":"QWindowContainer::parentWasChanged(QWidget*)","symbolLocation":416,"imageIndex":49},{"imageOffset":487272,"symbol":"QWindowContainer::parentWasChanged(QWidget*)","symbolLocation":416,"imageIndex":49},{"imageOffset":291968,"symbol":"QWidget::setParent(QWidget*, QFlags)","symbolLocation":1924,"imageIndex":49},{"imageOffset":1394316,"symbol":"QDockWidget::~QDockWidget()","symbolLocation":56,"imageIndex":49},{"imageOffset":1162480,"symbol":"sipQDockWidget::~sipQDockWidget()","symbolLocation":64,"imageIndex":48},{"imageOffset":926328,"symbol":"QObject::event(QEvent*)","symbolLocation":724,"imageIndex":45},{"imageOffset":383724,"symbol":"QWidget::event(QEvent*)","symbolLocation":3156,"imageIndex":49},{"imageOffset":1398024,"symbol":"QDockWidget::event(QEvent*)","symbolLocation":768,"imageIndex":49},{"imageOffset":1164488,"symbol":"sipQDockWidget::event(QEvent*)","symbolLocation":224,"imageIndex":48},{"imageOffset":64628,"symbol":"QApplicationPrivate::notify_helper(QObject*, QEvent*)","symbolLocation":332,"imageIndex":49},{"imageOffset":71376,"symbol":"QApplication::notify(QObject*, QEvent*)","symbolLocation":3208,"imageIndex":49},{"imageOffset":1420288,"symbol":"sipQApplication::notify(QObject*, QEvent*)","symbolLocation":248,"imageIndex":48},{"imageOffset":626616,"symbol":"QCoreApplication::sendEvent(QObject*, QEvent*)","symbolLocation":172,"imageIndex":45},{"imageOffset":628792,"symbol":"QCoreApplicationPrivate::sendPostedEvents(QObject*, int, QThreadData*)","symbolLocation":524,"imageIndex":45},{"imageOffset":99652,"imageIndex":71},{"imageOffset":104420,"imageIndex":71},{"imageOffset":521484,"symbol":"__CFRUNLOOP_IS_CALLING_OUT_TO_A_SOURCE0_PERFORM_FUNCTION__","symbolLocation":28,"imageIndex":136},{"imageOffset":521376,"symbol":"__CFRunLoopDoSource0","symbolLocation":176,"imageIndex":136},{"imageOffset":520720,"symbol":"__CFRunLoopDoSources0","symbolLocation":244,"imageIndex":136},{"imageOffset":515608,"symbol":"__CFRunLoopRun","symbolLocation":828,"imageIndex":136},{"imageOffset":512904,"symbol":"CFRunLoopRunSpecific","symbolLocation":612,"imageIndex":136},{"imageOffset":200176,"symbol":"RunCurrentEventLoopInMode","symbolLocation":292,"imageIndex":137},{"imageOffset":199724,"symbol":"ReceiveNextEventCommon","symbolLocation":648,"imageIndex":137},{"imageOffset":199044,"symbol":"_BlockUntilNextEventMatchingListInModeWithFilter","symbolLocation":76,"imageIndex":137},{"imageOffset":233788,"symbol":"_DPSNextEvent","symbolLocation":636,"imageIndex":138},{"imageOffset":230104,"symbol":"-[NSApplication(NSEvent) _nextEventMatchingEventMask:untilDate:inMode:dequeue:]","symbolLocation":716,"imageIndex":138},{"imageOffset":182076,"symbol":"-[NSApplication run]","symbolLocation":464,"imageIndex":138},{"imageOffset":94312,"imageIndex":71},{"imageOffset":665212,"symbol":"QEventLoop::exec(QFlags)","symbolLocation":588,"imageIndex":45},{"imageOffset":625864,"symbol":"QCoreApplication::exec()","symbolLocation":228,"imageIndex":45},{"imageOffset":2507268,"symbol":"meth_QApplication_exec(_object*, _object*)","symbolLocation":96,"imageIndex":48},{"imageOffset":998296,"symbol":"cfunction_call","symbolLocation":96,"imageIndex":1},{"imageOffset":586556,"symbol":"_PyObject_MakeTpCall","symbolLocation":128,"imageIndex":1},{"imageOffset":1798332,"symbol":"_PyEval_EvalFrameDefault","symbolLocation":54032,"imageIndex":1},{"imageOffset":1739512,"symbol":"PyEval_EvalCode","symbolLocation":276,"imageIndex":1},{"imageOffset":1717120,"symbol":"builtin_exec","symbolLocation":428,"imageIndex":1},{"imageOffset":1000848,"symbol":"cfunction_vectorcall_FASTCALL_KEYWORDS","symbolLocation":80,"imageIndex":1},{"imageOffset":1797396,"symbol":"_PyEval_EvalFrameDefault","symbolLocation":53096,"imageIndex":1},{"imageOffset":1820600,"symbol":"_PyEval_Vector","symbolLocation":156,"imageIndex":1},{"imageOffset":2419316,"symbol":"pymain_run_module","symbolLocation":256,"imageIndex":1},{"imageOffset":2417940,"symbol":"Py_RunMain","symbolLocation":1784,"imageIndex":1},{"imageOffset":2422468,"symbol":"pymain_main","symbolLocation":52,"imageIndex":1},{"imageOffset":2422404,"symbol":"Py_Main","symbolLocation":36,"imageIndex":1},{"imageOffset":15764,"symbol":"main","symbolLocation":128,"imageIndex":0},{"imageOffset":24536,"symbol":"start","symbolLocation":2412,"imageIndex":139}]},{"id":8869028,"frames":[{"imageOffset":18160,"symbol":"__psynch_cvwait","symbolLocation":8,"imageIndex":132},{"imageOffset":30068,"symbol":"_pthread_cond_wait","symbolLocation":1232,"imageIndex":133},{"imageOffset":1502040,"symbol":"blas_thread_server","symbolLocation":360,"imageIndex":19},{"imageOffset":28584,"symbol":"_pthread_start","symbolLocation":148,"imageIndex":133},{"imageOffset":7584,"symbol":"thread_start","symbolLocation":8,"imageIndex":133}]},{"id":8869029,"frames":[{"imageOffset":18160,"symbol":"__psynch_cvwait","symbolLocation":8,"imageIndex":132},{"imageOffset":30068,"symbol":"_pthread_cond_wait","symbolLocation":1232,"imageIndex":133},{"imageOffset":1502040,"symbol":"blas_thread_server","symbolLocation":360,"imageIndex":19},{"imageOffset":28584,"symbol":"_pthread_start","symbolLocation":148,"imageIndex":133},{"imageOffset":7584,"symbol":"thread_start","symbolLocation":8,"imageIndex":133}]},{"id":8869030,"frames":[{"imageOffset":18160,"symbol":"__psynch_cvwait","symbolLocation":8,"imageIndex":132},{"imageOffset":30068,"symbol":"_pthread_cond_wait","symbolLocation":1232,"imageIndex":133},{"imageOffset":1502040,"symbol":"blas_thread_server","symbolLocation":360,"imageIndex":19},{"imageOffset":28584,"symbol":"_pthread_start","symbolLocation":148,"imageIndex":133},{"imageOffset":7584,"symbol":"thread_start","symbolLocation":8,"imageIndex":133}]},{"id":8869031,"frames":[{"imageOffset":18160,"symbol":"__psynch_cvwait","symbolLocation":8,"imageIndex":132},{"imageOffset":30068,"symbol":"_pthread_cond_wait","symbolLocation":1232,"imageIndex":133},{"imageOffset":1502040,"symbol":"blas_thread_server","symbolLocation":360,"imageIndex":19},{"imageOffset":28584,"symbol":"_pthread_start","symbolLocation":148,"imageIndex":133},{"imageOffset":7584,"symbol":"thread_start","symbolLocation":8,"imageIndex":133}]},{"id":8869032,"frames":[{"imageOffset":18160,"symbol":"__psynch_cvwait","symbolLocation":8,"imageIndex":132},{"imageOffset":30068,"symbol":"_pthread_cond_wait","symbolLocation":1232,"imageIndex":133},{"imageOffset":1502040,"symbol":"blas_thread_server","symbolLocation":360,"imageIndex":19},{"imageOffset":28584,"symbol":"_pthread_start","symbolLocation":148,"imageIndex":133},{"imageOffset":7584,"symbol":"thread_start","symbolLocation":8,"imageIndex":133}]},{"id":8869033,"frames":[{"imageOffset":18160,"symbol":"__psynch_cvwait","symbolLocation":8,"imageIndex":132},{"imageOffset":30068,"symbol":"_pthread_cond_wait","symbolLocation":1232,"imageIndex":133},{"imageOffset":1502040,"symbol":"blas_thread_server","symbolLocation":360,"imageIndex":19},{"imageOffset":28584,"symbol":"_pthread_start","symbolLocation":148,"imageIndex":133},{"imageOffset":7584,"symbol":"thread_start","symbolLocation":8,"imageIndex":133}]},{"id":8869034,"frames":[{"imageOffset":18160,"symbol":"__psynch_cvwait","symbolLocation":8,"imageIndex":132},{"imageOffset":30068,"symbol":"_pthread_cond_wait","symbolLocation":1232,"imageIndex":133},{"imageOffset":1502040,"symbol":"blas_thread_server","symbolLocation":360,"imageIndex":19},{"imageOffset":28584,"symbol":"_pthread_start","symbolLocation":148,"imageIndex":133},{"imageOffset":7584,"symbol":"thread_start","symbolLocation":8,"imageIndex":133}]},{"id":8869182,"name":"ThreadPoolServiceThread","frames":[{"imageOffset":52680,"symbol":"kevent64","symbolLocation":8,"imageIndex":132},{"imageOffset":82199848,"imageIndex":56},{"imageOffset":82199408,"imageIndex":56},{"imageOffset":81785636,"imageIndex":56},{"imageOffset":81493500,"imageIndex":56},{"imageOffset":81949676,"imageIndex":56},{"imageOffset":81840912,"imageIndex":56},{"imageOffset":81950076,"imageIndex":56},{"imageOffset":82060124,"imageIndex":56},{"imageOffset":28584,"symbol":"_pthread_start","symbolLocation":148,"imageIndex":133},{"imageOffset":7584,"symbol":"thread_start","symbolLocation":8,"imageIndex":133}]},{"id":8869183,"name":"ThreadPoolForegroundWorker","frames":[{"imageOffset":3828,"symbol":"mach_msg2_trap","symbolLocation":8,"imageIndex":132},{"imageOffset":78368,"symbol":"mach_msg2_internal","symbolLocation":80,"imageIndex":132},{"imageOffset":39768,"symbol":"mach_msg_overwrite","symbolLocation":604,"imageIndex":132},{"imageOffset":4720,"symbol":"mach_msg","symbolLocation":24,"imageIndex":132},{"imageOffset":82173992,"imageIndex":56},{"imageOffset":81632748,"imageIndex":56},{"imageOffset":81889324,"imageIndex":56},{"imageOffset":81892084,"imageIndex":56},{"imageOffset":81891252,"imageIndex":56},{"imageOffset":81890980,"imageIndex":56},{"imageOffset":82060124,"imageIndex":56},{"imageOffset":28584,"symbol":"_pthread_start","symbolLocation":148,"imageIndex":133},{"imageOffset":7584,"symbol":"thread_start","symbolLocation":8,"imageIndex":133}]},{"id":8869184,"name":"ThreadPoolBackgroundWorker","frames":[{"imageOffset":3828,"symbol":"mach_msg2_trap","symbolLocation":8,"imageIndex":132},{"imageOffset":78368,"symbol":"mach_msg2_internal","symbolLocation":80,"imageIndex":132},{"imageOffset":39768,"symbol":"mach_msg_overwrite","symbolLocation":604,"imageIndex":132},{"imageOffset":4720,"symbol":"mach_msg","symbolLocation":24,"imageIndex":132},{"imageOffset":82173992,"imageIndex":56},{"imageOffset":81632748,"imageIndex":56},{"imageOffset":81889324,"imageIndex":56},{"imageOffset":81892084,"imageIndex":56},{"imageOffset":81891120,"imageIndex":56},{"imageOffset":81891028,"imageIndex":56},{"imageOffset":82060124,"imageIndex":56},{"imageOffset":28584,"symbol":"_pthread_start","symbolLocation":148,"imageIndex":133},{"imageOffset":7584,"symbol":"thread_start","symbolLocation":8,"imageIndex":133}]},{"id":8869185,"name":"ThreadPoolForegroundWorker","frames":[{"imageOffset":3828,"symbol":"mach_msg2_trap","symbolLocation":8,"imageIndex":132},{"imageOffset":78368,"symbol":"mach_msg2_internal","symbolLocation":80,"imageIndex":132},{"imageOffset":39768,"symbol":"mach_msg_overwrite","symbolLocation":604,"imageIndex":132},{"imageOffset":4720,"symbol":"mach_msg","symbolLocation":24,"imageIndex":132},{"imageOffset":82173992,"imageIndex":56},{"imageOffset":81632748,"imageIndex":56},{"imageOffset":81889324,"imageIndex":56},{"imageOffset":81892084,"imageIndex":56},{"imageOffset":81891252,"imageIndex":56},{"imageOffset":81890980,"imageIndex":56},{"imageOffset":82060124,"imageIndex":56},{"imageOffset":28584,"symbol":"_pthread_start","symbolLocation":148,"imageIndex":133},{"imageOffset":7584,"symbol":"thread_start","symbolLocation":8,"imageIndex":133}]},{"id":8869186,"name":"Chrome_IOThread","frames":[{"imageOffset":52680,"symbol":"kevent64","symbolLocation":8,"imageIndex":132},{"imageOffset":82199848,"imageIndex":56},{"imageOffset":82199408,"imageIndex":56},{"imageOffset":81785636,"imageIndex":56},{"imageOffset":81493500,"imageIndex":56},{"imageOffset":81949676,"imageIndex":56},{"imageOffset":52985680,"imageIndex":56},{"imageOffset":81950076,"imageIndex":56},{"imageOffset":82060124,"imageIndex":56},{"imageOffset":28584,"symbol":"_pthread_start","symbolLocation":148,"imageIndex":133},{"imageOffset":7584,"symbol":"thread_start","symbolLocation":8,"imageIndex":133}]},{"id":8869187,"name":"NetworkConfigWatcher","frames":[{"imageOffset":3828,"symbol":"mach_msg2_trap","symbolLocation":8,"imageIndex":132},{"imageOffset":78368,"symbol":"mach_msg2_internal","symbolLocation":80,"imageIndex":132},{"imageOffset":39768,"symbol":"mach_msg_overwrite","symbolLocation":604,"imageIndex":132},{"imageOffset":4720,"symbol":"mach_msg","symbolLocation":24,"imageIndex":132},{"imageOffset":82173992,"imageIndex":56},{"imageOffset":81632748,"imageIndex":56},{"imageOffset":81632604,"imageIndex":56},{"imageOffset":81261552,"imageIndex":56},{"imageOffset":81785636,"imageIndex":56},{"imageOffset":81493500,"imageIndex":56},{"imageOffset":81949676,"imageIndex":56},{"imageOffset":81950076,"imageIndex":56},{"imageOffset":82060124,"imageIndex":56},{"imageOffset":28584,"symbol":"_pthread_start","symbolLocation":148,"imageIndex":133},{"imageOffset":7584,"symbol":"thread_start","symbolLocation":8,"imageIndex":133}]},{"id":8869188,"name":"ThreadPoolForegroundWorker","frames":[{"imageOffset":3828,"symbol":"mach_msg2_trap","symbolLocation":8,"imageIndex":132},{"imageOffset":78368,"symbol":"mach_msg2_internal","symbolLocation":80,"imageIndex":132},{"imageOffset":39768,"symbol":"mach_msg_overwrite","symbolLocation":604,"imageIndex":132},{"imageOffset":4720,"symbol":"mach_msg","symbolLocation":24,"imageIndex":132},{"imageOffset":82173992,"imageIndex":56},{"imageOffset":81632748,"imageIndex":56},{"imageOffset":81889324,"imageIndex":56},{"imageOffset":81892084,"imageIndex":56},{"imageOffset":81891252,"imageIndex":56},{"imageOffset":81890980,"imageIndex":56},{"imageOffset":82060124,"imageIndex":56},{"imageOffset":28584,"symbol":"_pthread_start","symbolLocation":148,"imageIndex":133},{"imageOffset":7584,"symbol":"thread_start","symbolLocation":8,"imageIndex":133}]},{"id":8869189,"name":"Chrome_InProcGpuThread","frames":[{"imageOffset":3828,"symbol":"mach_msg2_trap","symbolLocation":8,"imageIndex":132},{"imageOffset":78368,"symbol":"mach_msg2_internal","symbolLocation":80,"imageIndex":132},{"imageOffset":12684,"symbol":"io_connect_method","symbolLocation":516,"imageIndex":140},{"imageOffset":12124,"symbol":"IOConnectCallMethod","symbolLocation":236,"imageIndex":140},{"imageOffset":28036,"symbol":"IOSurfaceClientUpdateNonBulkValueCache","symbolLocation":364,"imageIndex":141},{"imageOffset":14160,"symbol":"IOSurfaceClientCopyValue","symbolLocation":108,"imageIndex":141},{"imageOffset":3604408,"symbol":"-[AGXG13XFamilyDevice newTextureWithDescriptor:iosurface:plane:]","symbolLocation":60,"imageIndex":142},{"imageOffset":42425428,"imageIndex":56},{"imageOffset":42224196,"imageIndex":56},{"imageOffset":42223936,"imageIndex":56},{"imageOffset":40873904,"imageIndex":56},{"imageOffset":112294972,"imageIndex":56},{"imageOffset":112311364,"imageIndex":56},{"imageOffset":89625256,"imageIndex":56},{"imageOffset":125461640,"imageIndex":56},{"imageOffset":125451072,"imageIndex":56},{"imageOffset":125325608,"imageIndex":56},{"imageOffset":125326300,"imageIndex":56},{"imageOffset":125157424,"imageIndex":56},{"imageOffset":125132944,"imageIndex":56},{"imageOffset":125143448,"imageIndex":56},{"imageOffset":118238324,"imageIndex":56},{"imageOffset":125554904,"imageIndex":56},{"imageOffset":125554196,"imageIndex":56},{"imageOffset":125583268,"imageIndex":56},{"imageOffset":125597568,"imageIndex":56},{"imageOffset":118303288,"imageIndex":56},{"imageOffset":118263908,"imageIndex":56},{"imageOffset":118260908,"imageIndex":56},{"imageOffset":81644988,"imageIndex":56},{"imageOffset":81782480,"imageIndex":56},{"imageOffset":81781184,"imageIndex":56},{"imageOffset":82448100,"imageIndex":56},{"imageOffset":81123504,"imageIndex":56},{"imageOffset":82446020,"imageIndex":56},{"imageOffset":521484,"symbol":"__CFRUNLOOP_IS_CALLING_OUT_TO_A_SOURCE0_PERFORM_FUNCTION__","symbolLocation":28,"imageIndex":136},{"imageOffset":521376,"symbol":"__CFRunLoopDoSource0","symbolLocation":176,"imageIndex":136},{"imageOffset":520720,"symbol":"__CFRunLoopDoSources0","symbolLocation":244,"imageIndex":136},{"imageOffset":515608,"symbol":"__CFRunLoopRun","symbolLocation":828,"imageIndex":136},{"imageOffset":512904,"symbol":"CFRunLoopRunSpecific","symbolLocation":612,"imageIndex":136},{"imageOffset":380392,"symbol":"-[NSRunLoop(NSRunLoop) runMode:beforeDate:]","symbolLocation":212,"imageIndex":143},{"imageOffset":82449912,"imageIndex":56},{"imageOffset":82444436,"imageIndex":56},{"imageOffset":81785636,"imageIndex":56},{"imageOffset":81493500,"imageIndex":56},{"imageOffset":81949676,"imageIndex":56},{"imageOffset":81950076,"imageIndex":56},{"imageOffset":82060124,"imageIndex":56},{"imageOffset":28584,"symbol":"_pthread_start","symbolLocation":148,"imageIndex":133},{"imageOffset":7584,"symbol":"thread_start","symbolLocation":8,"imageIndex":133}]},{"id":8869190,"name":"Chrome_ChildIOThread","frames":[{"imageOffset":52680,"symbol":"kevent64","symbolLocation":8,"imageIndex":132},{"imageOffset":82199848,"imageIndex":56},{"imageOffset":82199408,"imageIndex":56},{"imageOffset":81785636,"imageIndex":56},{"imageOffset":81493500,"imageIndex":56},{"imageOffset":81949676,"imageIndex":56},{"imageOffset":129226480,"imageIndex":56},{"imageOffset":81950076,"imageIndex":56},{"imageOffset":82060124,"imageIndex":56},{"imageOffset":28584,"symbol":"_pthread_start","symbolLocation":148,"imageIndex":133},{"imageOffset":7584,"symbol":"thread_start","symbolLocation":8,"imageIndex":133}]},{"id":8869191,"name":"CompositorTileWorker1","frames":[{"imageOffset":18160,"symbol":"__psynch_cvwait","symbolLocation":8,"imageIndex":132},{"imageOffset":30068,"symbol":"_pthread_cond_wait","symbolLocation":1232,"imageIndex":133},{"imageOffset":82057108,"imageIndex":56},{"imageOffset":117284580,"imageIndex":56},{"imageOffset":82060124,"imageIndex":56},{"imageOffset":28584,"symbol":"_pthread_start","symbolLocation":148,"imageIndex":133},{"imageOffset":7584,"symbol":"thread_start","symbolLocation":8,"imageIndex":133}]},{"id":8869192,"name":"ThreadPoolForegroundWorker","frames":[{"imageOffset":3828,"symbol":"mach_msg2_trap","symbolLocation":8,"imageIndex":132},{"imageOffset":78368,"symbol":"mach_msg2_internal","symbolLocation":80,"imageIndex":132},{"imageOffset":39768,"symbol":"mach_msg_overwrite","symbolLocation":604,"imageIndex":132},{"imageOffset":4720,"symbol":"mach_msg","symbolLocation":24,"imageIndex":132},{"imageOffset":82173992,"imageIndex":56},{"imageOffset":81632748,"imageIndex":56},{"imageOffset":81889324,"imageIndex":56},{"imageOffset":81892084,"imageIndex":56},{"imageOffset":81891252,"imageIndex":56},{"imageOffset":81890980,"imageIndex":56},{"imageOffset":82060124,"imageIndex":56},{"imageOffset":28584,"symbol":"_pthread_start","symbolLocation":148,"imageIndex":133},{"imageOffset":7584,"symbol":"thread_start","symbolLocation":8,"imageIndex":133}]},{"id":8869193,"name":"NetworkConfigWatcher","frames":[{"imageOffset":3828,"symbol":"mach_msg2_trap","symbolLocation":8,"imageIndex":132},{"imageOffset":78368,"symbol":"mach_msg2_internal","symbolLocation":80,"imageIndex":132},{"imageOffset":39768,"symbol":"mach_msg_overwrite","symbolLocation":604,"imageIndex":132},{"imageOffset":4720,"symbol":"mach_msg","symbolLocation":24,"imageIndex":132},{"imageOffset":82173992,"imageIndex":56},{"imageOffset":81632748,"imageIndex":56},{"imageOffset":81632604,"imageIndex":56},{"imageOffset":81261552,"imageIndex":56},{"imageOffset":81785636,"imageIndex":56},{"imageOffset":81493500,"imageIndex":56},{"imageOffset":81949676,"imageIndex":56},{"imageOffset":81950076,"imageIndex":56},{"imageOffset":82060124,"imageIndex":56},{"imageOffset":28584,"symbol":"_pthread_start","symbolLocation":148,"imageIndex":133},{"imageOffset":7584,"symbol":"thread_start","symbolLocation":8,"imageIndex":133}]},{"id":8869194,"name":"VizCompositorThread","frames":[{"imageOffset":3828,"symbol":"mach_msg2_trap","symbolLocation":8,"imageIndex":132},{"imageOffset":78368,"symbol":"mach_msg2_internal","symbolLocation":80,"imageIndex":132},{"imageOffset":39768,"symbol":"mach_msg_overwrite","symbolLocation":604,"imageIndex":132},{"imageOffset":4720,"symbol":"mach_msg","symbolLocation":24,"imageIndex":132},{"imageOffset":521908,"symbol":"__CFRunLoopServiceMachPort","symbolLocation":160,"imageIndex":136},{"imageOffset":515988,"symbol":"__CFRunLoopRun","symbolLocation":1208,"imageIndex":136},{"imageOffset":512904,"symbol":"CFRunLoopRunSpecific","symbolLocation":612,"imageIndex":136},{"imageOffset":380392,"symbol":"-[NSRunLoop(NSRunLoop) runMode:beforeDate:]","symbolLocation":212,"imageIndex":143},{"imageOffset":82449912,"imageIndex":56},{"imageOffset":82444436,"imageIndex":56},{"imageOffset":81785636,"imageIndex":56},{"imageOffset":81493500,"imageIndex":56},{"imageOffset":81949676,"imageIndex":56},{"imageOffset":81950076,"imageIndex":56},{"imageOffset":82060124,"imageIndex":56},{"imageOffset":28584,"symbol":"_pthread_start","symbolLocation":148,"imageIndex":133},{"imageOffset":7584,"symbol":"thread_start","symbolLocation":8,"imageIndex":133}]},{"id":8869196,"name":"NetworkService","frames":[{"imageOffset":52680,"symbol":"kevent64","symbolLocation":8,"imageIndex":132},{"imageOffset":82199848,"imageIndex":56},{"imageOffset":82199408,"imageIndex":56},{"imageOffset":81785636,"imageIndex":56},{"imageOffset":81493500,"imageIndex":56},{"imageOffset":81949676,"imageIndex":56},{"imageOffset":81950076,"imageIndex":56},{"imageOffset":82060124,"imageIndex":56},{"imageOffset":28584,"symbol":"_pthread_start","symbolLocation":148,"imageIndex":133},{"imageOffset":7584,"symbol":"thread_start","symbolLocation":8,"imageIndex":133}]},{"id":8869197,"name":"NetworkNotificationThreadMac","frames":[{"imageOffset":3828,"symbol":"mach_msg2_trap","symbolLocation":8,"imageIndex":132},{"imageOffset":78368,"symbol":"mach_msg2_internal","symbolLocation":80,"imageIndex":132},{"imageOffset":39768,"symbol":"mach_msg_overwrite","symbolLocation":604,"imageIndex":132},{"imageOffset":4720,"symbol":"mach_msg","symbolLocation":24,"imageIndex":132},{"imageOffset":521908,"symbol":"__CFRunLoopServiceMachPort","symbolLocation":160,"imageIndex":136},{"imageOffset":515988,"symbol":"__CFRunLoopRun","symbolLocation":1208,"imageIndex":136},{"imageOffset":512904,"symbol":"CFRunLoopRunSpecific","symbolLocation":612,"imageIndex":136},{"imageOffset":380392,"symbol":"-[NSRunLoop(NSRunLoop) runMode:beforeDate:]","symbolLocation":212,"imageIndex":143},{"imageOffset":82449912,"imageIndex":56},{"imageOffset":82444436,"imageIndex":56},{"imageOffset":81785636,"imageIndex":56},{"imageOffset":81493500,"imageIndex":56},{"imageOffset":81949676,"imageIndex":56},{"imageOffset":81950076,"imageIndex":56},{"imageOffset":82060124,"imageIndex":56},{"imageOffset":28584,"symbol":"_pthread_start","symbolLocation":148,"imageIndex":133},{"imageOffset":7584,"symbol":"thread_start","symbolLocation":8,"imageIndex":133}]},{"id":8869198,"name":"NetworkConfigWatcher","frames":[{"imageOffset":3828,"symbol":"mach_msg2_trap","symbolLocation":8,"imageIndex":132},{"imageOffset":78368,"symbol":"mach_msg2_internal","symbolLocation":80,"imageIndex":132},{"imageOffset":39768,"symbol":"mach_msg_overwrite","symbolLocation":604,"imageIndex":132},{"imageOffset":4720,"symbol":"mach_msg","symbolLocation":24,"imageIndex":132},{"imageOffset":82173992,"imageIndex":56},{"imageOffset":81632748,"imageIndex":56},{"imageOffset":81632604,"imageIndex":56},{"imageOffset":81261552,"imageIndex":56},{"imageOffset":81785636,"imageIndex":56},{"imageOffset":81493500,"imageIndex":56},{"imageOffset":81949676,"imageIndex":56},{"imageOffset":81950076,"imageIndex":56},{"imageOffset":82060124,"imageIndex":56},{"imageOffset":28584,"symbol":"_pthread_start","symbolLocation":148,"imageIndex":133},{"imageOffset":7584,"symbol":"thread_start","symbolLocation":8,"imageIndex":133}]},{"id":8869199,"name":"ThreadPoolSingleThreadForegroundBlocking0","frames":[{"imageOffset":3828,"symbol":"mach_msg2_trap","symbolLocation":8,"imageIndex":132},{"imageOffset":78368,"symbol":"mach_msg2_internal","symbolLocation":80,"imageIndex":132},{"imageOffset":39768,"symbol":"mach_msg_overwrite","symbolLocation":604,"imageIndex":132},{"imageOffset":4720,"symbol":"mach_msg","symbolLocation":24,"imageIndex":132},{"imageOffset":82173992,"imageIndex":56},{"imageOffset":81632748,"imageIndex":56},{"imageOffset":81889324,"imageIndex":56},{"imageOffset":81892084,"imageIndex":56},{"imageOffset":81891340,"imageIndex":56},{"imageOffset":81891040,"imageIndex":56},{"imageOffset":82060124,"imageIndex":56},{"imageOffset":28584,"symbol":"_pthread_start","symbolLocation":148,"imageIndex":133},{"imageOffset":7584,"symbol":"thread_start","symbolLocation":8,"imageIndex":133}]},{"id":8869216,"name":"NetworkConfigWatcher","frames":[{"imageOffset":3828,"symbol":"mach_msg2_trap","symbolLocation":8,"imageIndex":132},{"imageOffset":78368,"symbol":"mach_msg2_internal","symbolLocation":80,"imageIndex":132},{"imageOffset":39768,"symbol":"mach_msg_overwrite","symbolLocation":604,"imageIndex":132},{"imageOffset":4720,"symbol":"mach_msg","symbolLocation":24,"imageIndex":132},{"imageOffset":82173992,"imageIndex":56},{"imageOffset":81632748,"imageIndex":56},{"imageOffset":81632604,"imageIndex":56},{"imageOffset":81261552,"imageIndex":56},{"imageOffset":81785636,"imageIndex":56},{"imageOffset":81493500,"imageIndex":56},{"imageOffset":81949676,"imageIndex":56},{"imageOffset":81950076,"imageIndex":56},{"imageOffset":82060124,"imageIndex":56},{"imageOffset":28584,"symbol":"_pthread_start","symbolLocation":148,"imageIndex":133},{"imageOffset":7584,"symbol":"thread_start","symbolLocation":8,"imageIndex":133}]},{"id":8869233,"name":"ThreadPoolBackgroundWorker","frames":[{"imageOffset":3828,"symbol":"mach_msg2_trap","symbolLocation":8,"imageIndex":132},{"imageOffset":78368,"symbol":"mach_msg2_internal","symbolLocation":80,"imageIndex":132},{"imageOffset":39768,"symbol":"mach_msg_overwrite","symbolLocation":604,"imageIndex":132},{"imageOffset":4720,"symbol":"mach_msg","symbolLocation":24,"imageIndex":132},{"imageOffset":82173992,"imageIndex":56},{"imageOffset":81632748,"imageIndex":56},{"imageOffset":81889324,"imageIndex":56},{"imageOffset":81892084,"imageIndex":56},{"imageOffset":81891120,"imageIndex":56},{"imageOffset":81891028,"imageIndex":56},{"imageOffset":82060124,"imageIndex":56},{"imageOffset":28584,"symbol":"_pthread_start","symbolLocation":148,"imageIndex":133},{"imageOffset":7584,"symbol":"thread_start","symbolLocation":8,"imageIndex":133}]},{"id":8869234,"name":"com.apple.NSEventThread","frames":[{"imageOffset":3828,"symbol":"mach_msg2_trap","symbolLocation":8,"imageIndex":132},{"imageOffset":78368,"symbol":"mach_msg2_internal","symbolLocation":80,"imageIndex":132},{"imageOffset":39768,"symbol":"mach_msg_overwrite","symbolLocation":604,"imageIndex":132},{"imageOffset":4720,"symbol":"mach_msg","symbolLocation":24,"imageIndex":132},{"imageOffset":521908,"symbol":"__CFRunLoopServiceMachPort","symbolLocation":160,"imageIndex":136},{"imageOffset":515988,"symbol":"__CFRunLoopRun","symbolLocation":1208,"imageIndex":136},{"imageOffset":512904,"symbol":"CFRunLoopRunSpecific","symbolLocation":612,"imageIndex":136},{"imageOffset":1456072,"symbol":"_NSEventThread","symbolLocation":172,"imageIndex":138},{"imageOffset":28584,"symbol":"_pthread_start","symbolLocation":148,"imageIndex":133},{"imageOffset":7584,"symbol":"thread_start","symbolLocation":8,"imageIndex":133}]},{"id":8869235,"name":"MemoryInfra","frames":[{"imageOffset":3828,"symbol":"mach_msg2_trap","symbolLocation":8,"imageIndex":132},{"imageOffset":78368,"symbol":"mach_msg2_internal","symbolLocation":80,"imageIndex":132},{"imageOffset":39768,"symbol":"mach_msg_overwrite","symbolLocation":604,"imageIndex":132},{"imageOffset":4720,"symbol":"mach_msg","symbolLocation":24,"imageIndex":132},{"imageOffset":82173992,"imageIndex":56},{"imageOffset":81632748,"imageIndex":56},{"imageOffset":81632604,"imageIndex":56},{"imageOffset":81261552,"imageIndex":56},{"imageOffset":81785636,"imageIndex":56},{"imageOffset":81493500,"imageIndex":56},{"imageOffset":81949676,"imageIndex":56},{"imageOffset":81950076,"imageIndex":56},{"imageOffset":82060124,"imageIndex":56},{"imageOffset":28584,"symbol":"_pthread_start","symbolLocation":148,"imageIndex":133},{"imageOffset":7584,"symbol":"thread_start","symbolLocation":8,"imageIndex":133}]},{"id":8869236,"name":"ThreadPoolSingleThreadSharedBackgroundBlocking1","frames":[{"imageOffset":3828,"symbol":"mach_msg2_trap","symbolLocation":8,"imageIndex":132},{"imageOffset":78368,"symbol":"mach_msg2_internal","symbolLocation":80,"imageIndex":132},{"imageOffset":39768,"symbol":"mach_msg_overwrite","symbolLocation":604,"imageIndex":132},{"imageOffset":4720,"symbol":"mach_msg","symbolLocation":24,"imageIndex":132},{"imageOffset":82173992,"imageIndex":56},{"imageOffset":81632748,"imageIndex":56},{"imageOffset":81889324,"imageIndex":56},{"imageOffset":81892084,"imageIndex":56},{"imageOffset":81891164,"imageIndex":56},{"imageOffset":81891076,"imageIndex":56},{"imageOffset":82060124,"imageIndex":56},{"imageOffset":28584,"symbol":"_pthread_start","symbolLocation":148,"imageIndex":133},{"imageOffset":7584,"symbol":"thread_start","symbolLocation":8,"imageIndex":133}]},{"id":8869237,"name":"ThreadPoolSingleThreadSharedForeground2","frames":[{"imageOffset":3828,"symbol":"mach_msg2_trap","symbolLocation":8,"imageIndex":132},{"imageOffset":78368,"symbol":"mach_msg2_internal","symbolLocation":80,"imageIndex":132},{"imageOffset":39768,"symbol":"mach_msg_overwrite","symbolLocation":604,"imageIndex":132},{"imageOffset":4720,"symbol":"mach_msg","symbolLocation":24,"imageIndex":132},{"imageOffset":82173992,"imageIndex":56},{"imageOffset":81632748,"imageIndex":56},{"imageOffset":81889324,"imageIndex":56},{"imageOffset":81892084,"imageIndex":56},{"imageOffset":81891296,"imageIndex":56},{"imageOffset":81891052,"imageIndex":56},{"imageOffset":82060124,"imageIndex":56},{"imageOffset":28584,"symbol":"_pthread_start","symbolLocation":148,"imageIndex":133},{"imageOffset":7584,"symbol":"thread_start","symbolLocation":8,"imageIndex":133}]},{"id":8877564,"frames":[{"imageOffset":7564,"symbol":"start_wqthread","symbolLocation":0,"imageIndex":133}]},{"id":8883204,"frames":[{"imageOffset":7564,"symbol":"start_wqthread","symbolLocation":0,"imageIndex":133}]},{"id":8890891,"frames":[{"imageOffset":7564,"symbol":"start_wqthread","symbolLocation":0,"imageIndex":133}]},{"id":8897434,"frames":[{"imageOffset":7564,"symbol":"start_wqthread","symbolLocation":0,"imageIndex":133}]},{"id":8912352,"frames":[{"imageOffset":7564,"symbol":"start_wqthread","symbolLocation":0,"imageIndex":133}]}],
"usedImages" : [
{
"source" : "P",
"arch" : "arm64",
"base" : 4372840448,
"CFBundleShortVersionString" : "1.11.0",
"CFBundleIdentifier" : "edu.ucsf.cgl.ChimeraX",
"size" : 16384,
"uuid" : "9cf8124a-d876-34ad-b7ee-c011183ebc15",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/MacOS\/ChimeraX",
"name" : "ChimeraX",
"CFBundleVersion" : "1.11.0.0"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4387520512,
"CFBundleShortVersionString" : "3.11.9, (c) 2001-2023 Python Software Foundation.",
"CFBundleIdentifier" : "org.python.python",
"size" : 3981312,
"uuid" : "5662657e-7928-39be-8954-d582f8f34d51",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/Python",
"name" : "Python",
"CFBundleVersion" : "3.11.9"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4378066944,
"size" : 49152,
"uuid" : "29c3ec8a-19d4-363b-a6d9-9c2abec94f03",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/math.cpython-311-darwin.so",
"name" : "math.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4377804800,
"size" : 81920,
"uuid" : "4dbedf5d-0596-39ea-b10e-f25d3a6c8cfb",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_datetime.cpython-311-darwin.so",
"name" : "_datetime.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4377985024,
"size" : 16384,
"uuid" : "4b805031-de4f-3814-b939-e5cb2842c3e6",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_typing.cpython-311-darwin.so",
"name" : "_typing.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4380524544,
"size" : 32768,
"uuid" : "78e93840-6aa2-3e12-88b1-3d140c86db21",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/zlib.cpython-311-darwin.so",
"name" : "zlib.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4380639232,
"size" : 16384,
"uuid" : "76d59f87-05bd-3453-988f-6a1d92e48d0b",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_bz2.cpython-311-darwin.so",
"name" : "_bz2.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4381310976,
"size" : 196608,
"uuid" : "aa0512bd-866a-3f89-a0b1-370c93044c89",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_lzma.cpython-311-darwin.so",
"name" : "_lzma.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4380721152,
"size" : 16384,
"uuid" : "1701fe90-bec8-3df9-af49-24e174fdc9fc",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_bisect.cpython-311-darwin.so",
"name" : "_bisect.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4380803072,
"size" : 16384,
"uuid" : "66c350e7-dd50-30e7-9149-bd34d073a97b",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_random.cpython-311-darwin.so",
"name" : "_random.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4380884992,
"size" : 16384,
"uuid" : "2eddec17-84f0-384f-badb-24bd02d808c9",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_sha512.cpython-311-darwin.so",
"name" : "_sha512.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4380966912,
"size" : 32768,
"uuid" : "b942d9ac-2a05-30f3-90ef-07a312233107",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/binascii.cpython-311-darwin.so",
"name" : "binascii.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4381065216,
"size" : 32768,
"uuid" : "2a9c55d5-61e3-3c08-afe7-a90f29fb3885",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_struct.cpython-311-darwin.so",
"name" : "_struct.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4381179904,
"size" : 16384,
"uuid" : "4d6fbc3b-cd0b-392c-9f1c-9ff89288e939",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/fcntl.cpython-311-darwin.so",
"name" : "fcntl.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4381605888,
"size" : 16384,
"uuid" : "3a00fdd3-8009-389a-b150-0f692c95822f",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_posixsubprocess.cpython-311-darwin.so",
"name" : "_posixsubprocess.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4381687808,
"size" : 32768,
"uuid" : "4c0501e5-d7a1-34d7-aa7c-75dfe924b268",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/select.cpython-311-darwin.so",
"name" : "select.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4382834688,
"size" : 16384,
"uuid" : "7ee0d739-e7e8-32b9-a76a-56ddde713d9b",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/arrays\/_arrays.cpython-311-darwin.so",
"name" : "_arrays.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4384980992,
"size" : 540672,
"uuid" : "798c7e42-88a3-3418-b4d3-ffeb9e6a7486",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/arrays\/lib\/libarrays.dylib",
"name" : "libarrays.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4403691520,
"size" : 2670592,
"uuid" : "744b099b-9156-3efd-95ee-949f9bec068e",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/numpy\/core\/_multiarray_umath.cpython-311-darwin.so",
"name" : "_multiarray_umath.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4697620480,
"size" : 21299200,
"uuid" : "9854a721-2573-3169-81ec-19ea40ce8077",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/numpy\/.dylibs\/libopenblas64_.0.dylib",
"name" : "libopenblas64_.0.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4394909696,
"size" : 3522560,
"uuid" : "dd0e012a-b6de-31b1-a28e-260c7b51e595",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/numpy\/.dylibs\/libgfortran.5.dylib",
"name" : "libgfortran.5.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4385669120,
"size" : 311296,
"uuid" : "6d39d54b-d80e-3218-a095-b81ad0b3be90",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/numpy\/.dylibs\/libquadmath.0.dylib",
"name" : "libquadmath.0.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4380295168,
"size" : 65536,
"uuid" : "d9875303-8f38-33d9-a0d3-ab0adff3b915",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/numpy\/.dylibs\/libgcc_s.1.1.dylib",
"name" : "libgcc_s.1.1.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4384358400,
"size" : 98304,
"uuid" : "a262ab27-9e1b-3b52-9b2f-1c173bcac7f9",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_pickle.cpython-311-darwin.so",
"name" : "_pickle.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4380442624,
"size" : 16384,
"uuid" : "dd2e6975-e10c-3bf3-9bb5-95cfb3c5d91e",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_contextvars.cpython-311-darwin.so",
"name" : "_contextvars.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4384538624,
"size" : 65536,
"uuid" : "340d4f4e-8cd4-3e24-9215-eb9235031bd3",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/numpy\/core\/_multiarray_tests.cpython-311-darwin.so",
"name" : "_multiarray_tests.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4384686080,
"size" : 81920,
"uuid" : "1288fa0d-7e49-3d72-a33f-338b00fa673f",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_ctypes.cpython-311-darwin.so",
"name" : "_ctypes.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4383965184,
"size" : 98304,
"uuid" : "09f94631-f551-3559-ba88-aff49917d8fe",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/numpy\/linalg\/_umath_linalg.cpython-311-darwin.so",
"name" : "_umath_linalg.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4384145408,
"size" : 65536,
"uuid" : "7b5335ce-92a1-3ae2-bde0-0e5d5641b2c9",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/numpy\/fft\/_pocketfft_internal.cpython-311-darwin.so",
"name" : "_pocketfft_internal.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4402266112,
"size" : 622592,
"uuid" : "05ddaab9-9d7f-3317-a3c4-5e9936fe3ceb",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/numpy\/random\/mtrand.cpython-311-darwin.so",
"name" : "mtrand.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4387094528,
"size" : 147456,
"uuid" : "377e255e-f9a4-3173-8265-a899000c5d0f",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/numpy\/random\/bit_generator.cpython-311-darwin.so",
"name" : "bit_generator.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4401315840,
"size" : 196608,
"uuid" : "8590d52a-d755-3ffd-8f68-f9cb638359fc",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/numpy\/random\/_common.cpython-311-darwin.so",
"name" : "_common.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4387323904,
"size" : 32768,
"uuid" : "473ca62c-10c9-3a36-9a61-5ab9a1b7d0ba",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_hashlib.cpython-311-darwin.so",
"name" : "_hashlib.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4414914560,
"size" : 2473984,
"uuid" : "b85d21fc-4c7a-37e4-ad24-9b0d20177f55",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/libcrypto.3.dylib",
"name" : "libcrypto.3.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4384882688,
"size" : 32768,
"uuid" : "6781c716-85bc-3dcc-b059-b59077dd4059",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_blake2.cpython-311-darwin.so",
"name" : "_blake2.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4400742400,
"size" : 311296,
"uuid" : "0033ea49-a161-3564-b09e-6a6c3b902698",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/numpy\/random\/_bounded_integers.cpython-311-darwin.so",
"name" : "_bounded_integers.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4401135616,
"size" : 65536,
"uuid" : "7dab4595-a351-3061-861b-c426baee85b3",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/numpy\/random\/_mt19937.cpython-311-darwin.so",
"name" : "_mt19937.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4401889280,
"size" : 65536,
"uuid" : "d3035eea-ed0e-398a-afbe-f9a8016701db",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/numpy\/random\/_philox.cpython-311-darwin.so",
"name" : "_philox.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4401594368,
"size" : 81920,
"uuid" : "35fb9307-f991-3159-86db-21f6c67b9198",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/numpy\/random\/_pcg64.cpython-311-darwin.so",
"name" : "_pcg64.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4401758208,
"size" : 49152,
"uuid" : "17a4344b-3221-36c4-9019-53cc1223e124",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/numpy\/random\/_sfc64.cpython-311-darwin.so",
"name" : "_sfc64.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4409835520,
"size" : 737280,
"uuid" : "49451e8a-e3c8-3429-83d8-249e81e378cd",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/numpy\/random\/_generator.cpython-311-darwin.so",
"name" : "_generator.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4384276480,
"size" : 16384,
"uuid" : "e1984258-3aba-3351-9b97-6cc398e29690",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_opcode.cpython-311-darwin.so",
"name" : "_opcode.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4402036736,
"size" : 114688,
"uuid" : "1367224b-ad53-3fa5-a336-212b59e1f0d4",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/geometry\/_geometry.cpython-311-darwin.so",
"name" : "_geometry.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4403200000,
"size" : 32768,
"uuid" : "d8396ecd-b388-3762-afa8-2befbe9b0f1e",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_json.cpython-311-darwin.so",
"name" : "_json.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4720967680,
"size" : 1835008,
"uuid" : "f795a5bb-1601-3eef-8a24-ff39045324ec",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/QtCore.abi3.so",
"name" : "QtCore.abi3.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4419584000,
"size" : 4931584,
"uuid" : "115f06be-4c99-3fa9-8699-1605ab53b730",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/lib\/QtCore.framework\/Versions\/A\/QtCore",
"name" : "QtCore"
},
{
"source" : "P",
"arch" : "arm64e",
"base" : 4409589760,
"CFBundleShortVersionString" : "3.0",
"CFBundleIdentifier" : "com.apple.security.csparser",
"size" : 131072,
"uuid" : "34c56820-e217-3458-80c7-f752a21ff717",
"path" : "\/System\/Library\/Frameworks\/Security.framework\/Versions\/A\/PlugIns\/csparser.bundle\/Contents\/MacOS\/csparser",
"name" : "csparser",
"CFBundleVersion" : "60420.140.26.707.2"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4412784640,
"size" : 81920,
"uuid" : "9011152a-649a-3a28-a82a-d2fbd01b3b85",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/sip.cpython-311-darwin.so",
"name" : "sip.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4823891968,
"size" : 3112960,
"uuid" : "bbbb795a-1712-3aa5-9c1d-79c5a5d20ba7",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/QtWidgets.abi3.so",
"name" : "QtWidgets.abi3.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4724998144,
"size" : 4636672,
"uuid" : "e84cfcf9-d145-312e-885c-159d40dfbd9e",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/lib\/QtWidgets.framework\/Versions\/A\/QtWidgets",
"name" : "QtWidgets"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4999610368,
"size" : 6946816,
"uuid" : "4f544aad-06c2-3315-8261-1c9e3a7e3082",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/lib\/QtGui.framework\/Versions\/A\/QtGui",
"name" : "QtGui"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4739563520,
"size" : 540672,
"uuid" : "bd131634-af8c-3140-b3ef-21475baa7c1d",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/lib\/QtDBus.framework\/Versions\/A\/QtDBus",
"name" : "QtDBus"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4740251648,
"size" : 1622016,
"uuid" : "16a11f0c-dba0-350b-9e54-d52e40f9ebc1",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/QtGui.abi3.so",
"name" : "QtGui.abi3.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4409360384,
"size" : 81920,
"uuid" : "17c6a83d-c01f-3b5e-9c29-bf7b640879fa",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/QtWebEngineWidgets.abi3.so",
"name" : "QtWebEngineWidgets.abi3.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4414504960,
"size" : 98304,
"uuid" : "c72c75f1-3f40-3241-a8cb-fd32bdc459e8",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/lib\/QtWebEngineWidgets.framework\/Versions\/A\/QtWebEngineWidgets",
"name" : "QtWebEngineWidgets"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5007900672,
"size" : 278528,
"uuid" : "c96fa0df-a37c-3e85-adde-d047408f6f31",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/lib\/QtPrintSupport.framework\/Versions\/A\/QtPrintSupport",
"name" : "QtPrintSupport"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 6099779584,
"size" : 193298432,
"uuid" : "c26a485d-d432-35ce-8016-610e950c0145",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/lib\/QtWebEngineCore.framework\/Versions\/A\/QtWebEngineCore",
"name" : "QtWebEngineCore"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5545689088,
"size" : 4341760,
"uuid" : "8cc50909-a291-3873-b0e4-936c2415e199",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/lib\/QtQuick.framework\/Versions\/A\/QtQuick",
"name" : "QtQuick"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5008392192,
"size" : 425984,
"uuid" : "a5c4c691-be77-3d0a-a711-c0da2c7ebbe5",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/lib\/QtOpenGL.framework\/Versions\/A\/QtOpenGL",
"name" : "QtOpenGL"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4830363648,
"size" : 98304,
"uuid" : "9fbace26-34c2-3772-9442-50449fdf5341",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/lib\/QtQmlMeta.framework\/Versions\/A\/QtQmlMeta",
"name" : "QtQmlMeta"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4830560256,
"size" : 540672,
"uuid" : "6b2b9d8c-c8b4-3e8a-b9d3-ed9cd5c936eb",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/lib\/QtQmlModels.framework\/Versions\/A\/QtQmlModels",
"name" : "QtQmlModels"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4403560448,
"size" : 49152,
"uuid" : "85f9928e-1e00-32b1-a29b-823bf96226cc",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/lib\/QtQmlWorkerScript.framework\/Versions\/A\/QtQmlWorkerScript",
"name" : "QtQmlWorkerScript"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4412981248,
"size" : 163840,
"uuid" : "67f3972d-46ca-383d-bff7-533024334e12",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/lib\/QtWebChannel.framework\/Versions\/A\/QtWebChannel",
"name" : "QtWebChannel"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5009031168,
"size" : 3883008,
"uuid" : "a8525ab7-f494-3aaf-afdf-60ec3e91e22f",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/lib\/QtQml.framework\/Versions\/A\/QtQml",
"name" : "QtQml"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5536808960,
"size" : 1261568,
"uuid" : "275fca10-8f7a-3f0f-a94f-d4b0d98fa0c5",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/lib\/QtNetwork.framework\/Versions\/A\/QtNetwork",
"name" : "QtNetwork"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5534597120,
"size" : 425984,
"uuid" : "4c26174d-a1f7-3b1c-826a-343f1fcf3a30",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/lib\/QtPositioning.framework\/Versions\/A\/QtPositioning",
"name" : "QtPositioning"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4413243392,
"size" : 81920,
"uuid" : "1b95a491-2545-3d0b-abd7-d781835e0cd6",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/lib\/QtQuickWidgets.framework\/Versions\/A\/QtQuickWidgets",
"name" : "QtQuickWidgets"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5535186944,
"size" : 557056,
"uuid" : "0863c6da-887d-3535-871b-ec1c3c84f1d2",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/QtNetwork.abi3.so",
"name" : "QtNetwork.abi3.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4831297536,
"size" : 163840,
"uuid" : "02b63494-9435-3dbe-8428-a9f8d6e31bff",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/QtPrintSupport.abi3.so",
"name" : "QtPrintSupport.abi3.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4414734336,
"size" : 32768,
"uuid" : "f4869ee8-0fea-3831-8bd6-3b6e7b94cbb3",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/QtWebChannel.abi3.so",
"name" : "QtWebChannel.abi3.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5533384704,
"size" : 278528,
"uuid" : "69ae506f-5419-349f-9bb1-1fa9074f88b5",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/QtWebEngineCore.abi3.so",
"name" : "QtWebEngineCore.abi3.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5540446208,
"size" : 688128,
"uuid" : "7cdd975f-1e6c-316b-a344-dec675d31e1b",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/plugins\/platforms\/libqcocoa.dylib",
"name" : "libqcocoa.dylib"
},
{
"source" : "P",
"arch" : "arm64e",
"base" : 5539627008,
"CFBundleShortVersionString" : "1.0",
"CFBundleIdentifier" : "com.apple.AppleMetalOpenGLRenderer",
"size" : 442368,
"uuid" : "49868112-30c6-37ae-9907-6e5bb4d6a8b6",
"path" : "\/System\/Library\/Extensions\/AppleMetalOpenGLRenderer.bundle\/Contents\/MacOS\/AppleMetalOpenGLRenderer",
"name" : "AppleMetalOpenGLRenderer",
"CFBundleVersion" : "1"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5544919040,
"size" : 147456,
"uuid" : "e337df1c-6c8f-3c8f-801b-d23394f34e54",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/plugins\/styles\/libqmacstyle.dylib",
"name" : "libqmacstyle.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5544558592,
"size" : 16384,
"uuid" : "35d693c5-c61b-308a-974c-b88655915dcd",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_heapq.cpython-311-darwin.so",
"name" : "_heapq.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5544394752,
"size" : 65536,
"uuid" : "3454571c-408b-34e5-9bae-96f393e4fb85",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_socket.cpython-311-darwin.so",
"name" : "_socket.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5545181184,
"size" : 49152,
"uuid" : "9c6afc97-732b-3225-b6e4-d3cd90218697",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/array.cpython-311-darwin.so",
"name" : "array.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5544640512,
"size" : 114688,
"uuid" : "99cf2bb1-f289-37d8-8b78-138157aa59f7",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_ssl.cpython-311-darwin.so",
"name" : "_ssl.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5566955520,
"size" : 409600,
"uuid" : "ae09de6b-222a-3004-b8cd-719ba8f2af8f",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/libssl.3.dylib",
"name" : "libssl.3.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5567594496,
"size" : 49152,
"uuid" : "0ab9ddb4-499f-3422-b288-c7314c99c753",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_asyncio.cpython-311-darwin.so",
"name" : "_asyncio.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5545492480,
"size" : 16384,
"uuid" : "24da3cc5-431f-3575-9146-f5229f2d3b50",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/atomic_lib\/_load_libs.cpython-311-darwin.so",
"name" : "_load_libs.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5608194048,
"size" : 1196032,
"uuid" : "d15342e8-ceea-360e-bb88-c626d1dbcf45",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/atomic_lib\/lib\/libatomstruct.dylib",
"name" : "libatomstruct.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5545312256,
"size" : 32768,
"uuid" : "d00d8cde-33ff-3d9a-a44c-d3a3383e9af4",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/atomic_lib\/lib\/libelement.dylib",
"name" : "libelement.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5545574400,
"size" : 16384,
"uuid" : "4889b3d4-fb97-36f3-bcd4-994cef8d233a",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/atomic_lib\/lib\/libpyinstance.dylib",
"name" : "libpyinstance.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5595725824,
"size" : 196608,
"uuid" : "a64f1692-b5ed-3a6e-8af6-eb74966c27a7",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/atomic\/libmolc.dylib",
"name" : "libmolc.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5605834752,
"size" : 393216,
"uuid" : "8e25df38-617e-30d2-a1b0-e87041c4e27a",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/atomic\/cymol.cpython-311-darwin.so",
"name" : "cymol.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5567741952,
"size" : 81920,
"uuid" : "3be63f3a-b912-343f-b9da-6254489c4995",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/tinyarray.cpython-311-darwin.so",
"name" : "tinyarray.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5607817216,
"size" : 65536,
"uuid" : "e655d5e0-f3a1-35fb-97fb-3f9e342a9d9f",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/atomic\/cytmpl.cpython-311-darwin.so",
"name" : "cytmpl.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5596151808,
"size" : 16384,
"uuid" : "d0232ed9-0e61-33d0-ba47-7ac35911d181",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/pdb_lib\/_load_libs.cpython-311-darwin.so",
"name" : "_load_libs.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5605687296,
"size" : 32768,
"uuid" : "8567b2ec-5ab4-3736-99b1-08ee1e19830b",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/pdb_lib\/lib\/libpdbconnect.dylib",
"name" : "libpdbconnect.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5607489536,
"size" : 147456,
"uuid" : "c01be11a-6cf7-3f1b-99e0-5c6bb0ec06ac",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/surface\/_surface.cpython-311-darwin.so",
"name" : "_surface.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5612011520,
"size" : 16384,
"uuid" : "800c3744-a004-3c84-932a-da77907f37a6",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_scproxy.cpython-311-darwin.so",
"name" : "_scproxy.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5613142016,
"size" : 491520,
"uuid" : "7f10dd0c-99c3-3868-a500-71a773e89420",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/map\/_map.cpython-311-darwin.so",
"name" : "_map.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5607981056,
"size" : 32768,
"uuid" : "1246c3db-77f6-3a6f-9f74-e5458e9e5f0b",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/psutil\/_psutil_osx.abi3.so",
"name" : "_psutil_osx.abi3.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5608095744,
"size" : 16384,
"uuid" : "d7f09611-5052-3c81-9703-da75c50a95b1",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/psutil\/_psutil_posix.abi3.so",
"name" : "_psutil_posix.abi3.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5613813760,
"size" : 49152,
"uuid" : "a0eb3bb7-e3c0-3e76-a804-6b717cc545a1",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/OpenGL_accelerate\/errorchecker.cpython-311-darwin.so",
"name" : "errorchecker.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5618941952,
"size" : 196608,
"uuid" : "ba26bdfa-16a0-331b-8ccf-bccf2ee6f0d9",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/OpenGL_accelerate\/arraydatatype.cpython-311-darwin.so",
"name" : "arraydatatype.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5618270208,
"size" : 229376,
"uuid" : "fc7b18f0-c85c-3396-bd07-4a2dcf09af5c",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/OpenGL_accelerate\/wrapper.cpython-311-darwin.so",
"name" : "wrapper.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5618647040,
"size" : 65536,
"uuid" : "93c61fa0-b608-3047-957b-aee1febd2d50",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/OpenGL_accelerate\/formathandler.cpython-311-darwin.so",
"name" : "formathandler.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5613944832,
"size" : 49152,
"uuid" : "8e8c5d0a-c910-3577-a5c5-f15a013d0c0a",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/OpenGL_accelerate\/latebind.cpython-311-darwin.so",
"name" : "latebind.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5628182528,
"size" : 131072,
"uuid" : "186b09bb-d974-32ab-94a8-1918ff802e3f",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/OpenGL_accelerate\/vbo.cpython-311-darwin.so",
"name" : "vbo.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5627871232,
"size" : 163840,
"uuid" : "6c696eae-d97e-30fa-9d5e-4d3a6cba4cdc",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/pyexpat.cpython-311-darwin.so",
"name" : "pyexpat.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64e",
"base" : 5666947072,
"size" : 49152,
"uuid" : "4daa2f71-4c51-3179-9c85-34a3e49c7fc0",
"path" : "\/usr\/lib\/libobjc-trampolines.dylib",
"name" : "libobjc-trampolines.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5682528256,
"size" : 1114112,
"uuid" : "8294cace-7433-3592-87d9-468d949e3e9c",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/unicodedata.cpython-311-darwin.so",
"name" : "unicodedata.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5667028992,
"size" : 16384,
"uuid" : "f22e7ecd-1756-3a75-8094-fe14c08a7f64",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/core\/_mac_util.cpython-311-darwin.so",
"name" : "_mac_util.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5824331776,
"size" : 49152,
"uuid" : "26d21849-9cfe-337d-949e-9cbd4e503f85",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/plugins\/iconengines\/libqsvgicon.dylib",
"name" : "libqsvgicon.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5827051520,
"size" : 360448,
"uuid" : "c8662156-1dc6-3e08-8b92-468d48d11c43",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/lib\/QtSvg.framework\/Versions\/A\/QtSvg",
"name" : "QtSvg"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5880414208,
"size" : 81920,
"uuid" : "95a80760-f95d-3f67-98ef-e126fdfec0e7",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/OpenGL_accelerate\/numpy_formathandler.cpython-311-darwin.so",
"name" : "numpy_formathandler.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5879234560,
"size" : 49152,
"uuid" : "69af4686-e656-310e-a4db-0a74f3b4d17b",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/OpenGL_accelerate\/nones_formathandler.cpython-311-darwin.so",
"name" : "nones_formathandler.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5871452160,
"size" : 180224,
"uuid" : "10522011-133f-36ae-81a5-c1a7e0551c92",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/pdb\/_pdbio.cpython-311-darwin.so",
"name" : "_pdbio.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5871157248,
"size" : 81920,
"uuid" : "7e059eb3-da7a-3884-8a33-50162d17a6a6",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/atomic\/_ribbons.cpython-311-darwin.so",
"name" : "_ribbons.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5829312512,
"size" : 32768,
"uuid" : "ed44825e-845f-3045-86d6-4c05ddca1bd6",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/graphics\/_graphics.cpython-311-darwin.so",
"name" : "_graphics.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5871894528,
"size" : 409600,
"uuid" : "87670432-2a08-3d22-a72d-202093440f81",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/mmcif\/mmcif.cpython-311-darwin.so",
"name" : "mmcif.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5892505600,
"size" : 442368,
"uuid" : "87f8779f-5ee4-3cca-b92a-355d80fc45c6",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/mmcif\/_mmcif.cpython-311-darwin.so",
"name" : "_mmcif.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5697585152,
"size" : 376832,
"uuid" : "449dd33a-e724-335b-9ef9-bf9b2730bf05",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PIL\/_imaging.cpython-311-darwin.so",
"name" : "_imaging.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5696421888,
"size" : 688128,
"uuid" : "d800b974-86b2-386e-be4e-8ac8e22fd3cd",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PIL\/.dylibs\/libtiff.6.dylib",
"name" : "libtiff.6.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5698142208,
"size" : 540672,
"uuid" : "dbec2c14-6e39-3319-a2c0-3606ed70093e",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PIL\/.dylibs\/libjpeg.62.4.0.dylib",
"name" : "libjpeg.62.4.0.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5901090816,
"size" : 606208,
"uuid" : "78bac0b1-a0df-3e6e-b906-cbc961cdb354",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PIL\/.dylibs\/libopenjp2.2.5.2.dylib",
"name" : "libopenjp2.2.5.2.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5697241088,
"size" : 114688,
"uuid" : "6e171b67-e226-3c3e-bc7c-5bd522f28494",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PIL\/.dylibs\/libz.1.3.1.dylib",
"name" : "libz.1.3.1.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5698797568,
"size" : 163840,
"uuid" : "8c16ecf4-eb91-3dbb-8543-fe43fcd625a5",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PIL\/.dylibs\/libxcb.1.1.0.dylib",
"name" : "libxcb.1.1.0.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5870764032,
"size" : 262144,
"uuid" : "37441cb2-0945-3607-9e47-10990b396b4c",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PIL\/.dylibs\/liblzma.5.dylib",
"name" : "liblzma.5.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5871337472,
"size" : 16384,
"uuid" : "9ee33d4a-150e-3574-9258-2061bb970c27",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PIL\/.dylibs\/libXau.6.0.0.dylib",
"name" : "libXau.6.0.0.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5697421312,
"size" : 32768,
"uuid" : "8abbdcef-1901-3d4b-9e6b-a38214b79214",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PIL\/_imagingmath.cpython-311-darwin.so",
"name" : "_imagingmath.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5872484352,
"size" : 16384,
"uuid" : "0bcb1847-a5bb-3a88-ac0c-2a7b5f7dfc84",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/alignment_algs\/_sw.cpython-311-darwin.so",
"name" : "_sw.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5888409600,
"size" : 16384,
"uuid" : "1d014a01-c395-3d2f-9375-1adc1443d036",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/alignment_algs\/libalign_algs.dylib",
"name" : "libalign_algs.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5888491520,
"size" : 16384,
"uuid" : "8b148205-1357-3576-9a9c-b017a1af299f",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/dssp\/_dssp.cpython-311-darwin.so",
"name" : "_dssp.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5889064960,
"size" : 32768,
"uuid" : "7a6915d5-72ff-37a1-8f66-7f218295d644",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/alignment_algs\/_nw.cpython-311-darwin.so",
"name" : "_nw.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5911035904,
"size" : 32768,
"uuid" : "f660af98-8bcc-35ff-a0a7-91590a2716eb",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_csv.cpython-311-darwin.so",
"name" : "_csv.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5911134208,
"size" : 753664,
"uuid" : "0d5e2b04-5266-3fcf-8917-51cab65a30b4",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/QtOpenGL.abi3.so",
"name" : "QtOpenGL.abi3.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5910839296,
"size" : 49152,
"uuid" : "6159a840-3c3a-3d9e-9af1-35dea6d209e4",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/QtOpenGLWidgets.abi3.so",
"name" : "QtOpenGLWidgets.abi3.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5912805376,
"size" : 49152,
"uuid" : "21309296-564a-3214-894b-5cb50594905b",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/lib\/QtOpenGLWidgets.framework\/Versions\/A\/QtOpenGLWidgets",
"name" : "QtOpenGLWidgets"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5914542080,
"size" : 16384,
"uuid" : "2498c48c-5a62-3fbc-b2e3-314429e5aa4b",
"path" : "\/Applications\/ChimeraX_Daily.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_queue.cpython-311-darwin.so",
"name" : "_queue.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64e",
"base" : 6655520768,
"size" : 237560,
"uuid" : "2fa938d1-30a0-3dfe-b05b-5dcba531318f",
"path" : "\/usr\/lib\/system\/libsystem_kernel.dylib",
"name" : "libsystem_kernel.dylib"
},
{
"source" : "P",
"arch" : "arm64e",
"base" : 6655758336,
"size" : 53248,
"uuid" : "e74e3db0-f8cb-34ab-831e-db30cbec154f",
"path" : "\/usr\/lib\/system\/libsystem_pthread.dylib",
"name" : "libsystem_pthread.dylib"
},
{
"source" : "P",
"arch" : "arm64e",
"base" : 6654308352,
"size" : 520184,
"uuid" : "d76df494-de63-350c-9d1b-25581159a9b1",
"path" : "\/usr\/lib\/system\/libsystem_c.dylib",
"name" : "libsystem_c.dylib"
},
{
"source" : "P",
"arch" : "arm64e",
"base" : 6655963136,
"size" : 28668,
"uuid" : "26b1286a-70dc-3e34-99d0-73d26257de71",
"path" : "\/usr\/lib\/system\/libsystem_platform.dylib",
"name" : "libsystem_platform.dylib"
},
{
"source" : "P",
"arch" : "arm64e",
"base" : 6656176128,
"CFBundleShortVersionString" : "6.9",
"CFBundleIdentifier" : "com.apple.CoreFoundation",
"size" : 5087232,
"uuid" : "c2f8baae-1100-3b56-8291-a30c7a51956d",
"path" : "\/System\/Library\/Frameworks\/CoreFoundation.framework\/Versions\/A\/CoreFoundation",
"name" : "CoreFoundation",
"CFBundleVersion" : "1979.104.902"
},
{
"source" : "P",
"arch" : "arm64e",
"base" : 6816272384,
"CFBundleShortVersionString" : "2.1.1",
"CFBundleIdentifier" : "com.apple.HIToolbox",
"size" : 3358720,
"uuid" : "c8970896-b9d1-3fd0-aa1e-99bc8ff4e84d",
"path" : "\/System\/Library\/Frameworks\/Carbon.framework\/Versions\/A\/Frameworks\/HIToolbox.framework\/Versions\/A\/HIToolbox",
"name" : "HIToolbox"
},
{
"source" : "P",
"arch" : "arm64e",
"base" : 6709075968,
"CFBundleShortVersionString" : "6.9",
"CFBundleIdentifier" : "com.apple.AppKit",
"size" : 15798272,
"uuid" : "73f3322d-9333-3bb3-859c-99901ca9a9b3",
"path" : "\/System\/Library\/Frameworks\/AppKit.framework\/Versions\/C\/AppKit",
"name" : "AppKit",
"CFBundleVersion" : "2299.77.138"
},
{
"source" : "P",
"arch" : "arm64e",
"base" : 6652256256,
"size" : 585536,
"uuid" : "61586563-0f20-3c2d-a9d6-c61850b3e471",
"path" : "\/usr\/lib\/dyld",
"name" : "dyld"
},
{
"source" : "P",
"arch" : "arm64e",
"base" : 6707765248,
"CFBundleShortVersionString" : "2.0.2",
"CFBundleIdentifier" : "com.apple.framework.IOKit",
"size" : 897024,
"uuid" : "87c84a94-044d-30ca-ba17-1ffa89b5afee",
"path" : "\/System\/Library\/Frameworks\/IOKit.framework\/Versions\/A\/IOKit",
"name" : "IOKit"
},
{
"source" : "P",
"arch" : "arm64e",
"base" : 6811222016,
"CFBundleShortVersionString" : "336.60.1",
"CFBundleIdentifier" : "com.apple.IOSurface",
"size" : 98304,
"uuid" : "6454d159-7d6c-33dd-a53f-689ea33b77ae",
"path" : "\/System\/Library\/Frameworks\/IOSurface.framework\/Versions\/A\/IOSurface",
"name" : "IOSurface",
"CFBundleVersion" : "336.60.1"
},
{
"source" : "P",
"arch" : "arm64e",
"base" : 7948271616,
"CFBundleShortVersionString" : "227.7.18",
"CFBundleIdentifier" : "com.apple.AGXMetalG13X",
"size" : 7163904,
"uuid" : "b83fc229-fa84-3de0-9109-8757f037d872",
"path" : "\/System\/Library\/Extensions\/AGXMetalG13X.bundle\/Contents\/MacOS\/AGXMetalG13X",
"name" : "AGXMetalG13X",
"CFBundleVersion" : "227.7.18"
},
{
"source" : "P",
"arch" : "arm64e",
"base" : 6672539648,
"CFBundleShortVersionString" : "6.9",
"CFBundleIdentifier" : "com.apple.Foundation",
"size" : 10248192,
"uuid" : "1142c17f-ebd8-3ee0-8495-4a03d6a6d139",
"path" : "\/System\/Library\/Frameworks\/Foundation.framework\/Versions\/C\/Foundation",
"name" : "Foundation",
"CFBundleVersion" : "1979.104.902"
},
{
"size" : 0,
"source" : "A",
"base" : 0,
"uuid" : "00000000-0000-0000-0000-000000000000"
}
],
"sharedCache" : {
"base" : 6651592704,
"size" : 3583918080,
"uuid" : "bde9d7fb-28a5-3e20-b62d-aa554d7e4794"
},
"vmSummary" : "ReadOnly portion of Libraries: Total=1.7G resident=0K(0%) swapped_out_or_unallocated=1.7G(100%)\nWritable regions: Total=3.1G written=0K(0%) resident=0K(0%) swapped_out=0K(0%) unallocated=3.1G(100%)\n\n VIRTUAL REGION \nREGION TYPE SIZE COUNT (non-coalesced) \n=========== ======= ======= \nAccelerate framework 256K 2 \nActivity Tracing 256K 1 \nCG backing stores 4480K 8 \nCG image 832K 39 \nColorSync 656K 30 \nCoreAnimation 1040K 62 \nCoreGraphics 80K 5 \nCoreUI image data 3360K 47 \nFoundation 48K 2 \nKernel Alloc Once 32K 1 \nMALLOC 1.6G 316 \nMALLOC guard page 192K 9 \nMALLOC_MEDIUM (reserved) 640.0M 8 reserved VM address space (unallocated)\nMALLOC_NANO (reserved) 256.0M 1 reserved VM address space (unallocated)\nMach message 64K 3 \nOpenGL GLSL 256K 3 \nPROTECTED_MEMORY 16K 1 \nSTACK GUARD 560K 35 \nStack 191.2M 36 \nStack Guard 56.0M 1 \nVM_ALLOCATE 276.2M 327 \nVM_ALLOCATE (reserved) 160.0M 2 reserved VM address space (unallocated)\n__AUTH 1931K 399 \n__AUTH_CONST 29.5M 637 \n__CTF 824 1 \n__DATA 20.0M 763 \n__DATA_CONST 56.9M 771 \n__DATA_DIRTY 2039K 247 \n__FONT_DATA 2352 1 \n__GLSLBUILTINS 5174K 1 \n__INFO_FILTER 8 1 \n__LINKEDIT 832.0M 133 \n__OBJC_RO 66.4M 1 \n__OBJC_RW 2012K 1 \n__TEXT 896.4M 791 \ndyld private memory 320K 4 \nmapped file 564.8M 97 \nshared memory 3184K 26 \n=========== ======= ======= \nTOTAL 5.6G 4813 \nTOTAL, minus reserved VM space 4.6G 4813 \n",
"legacyInfo" : {
"threadTriggered" : {
"name" : "CrBrowserMain",
"queue" : "com.apple.main-thread"
}
},
"logWritingSignature" : "e4067d1f6666e4fa886e359a9603beb22d43533a",
"trialInfo" : {
"rollouts" : [
{
"rolloutId" : "62c73fd17cce0d1b0bcb8a02",
"factorPackIds" : {
"SIRI_DIALOG_ASSETS" : "651482b98d79034dd899e383"
},
"deploymentId" : 240000212
},
{
"rolloutId" : "61675b89201f677a9a4cbd65",
"factorPackIds" : {
"HEALTH_FEATURE_AVAILABILITY" : "65a855f5f087695cfac03d1f"
},
"deploymentId" : 240000222
}
],
"experiments" : [
]
}
}
===== Log before crash start =====
UCSF ChimeraX version: 1.11.dev202508050120 (2025-08-05)
© 2016-2025 Regents of the University of California. All rights reserved.
How to cite UCSF ChimeraX
> open "/Users/gyoon9/Documents/Final structures/GTR1_pOHB_6.0_1237.pdb"
Chain information for GTR1_pOHB_6.0_1237.pdb #1
---
Chain | Description
B | No description available
> open "/Users/gyoon9/Documents/Final structures/GTR1_I3M_6.0_1856.pdb"
Chain information for GTR1_I3M_6.0_1856.pdb #2
---
Chain | Description
B | No description available
> open "/Users/gyoon9/Documents/Final structures/GTR1_4MTB_6.0_1855.pdb"
Chain information for GTR1_4MTB_6.0_1855.pdb #3
---
Chain | Description
B | No description available
> matchmaker #1 to #2
Parameters
---
Chain pairing | bb
Alignment algorithm | Needleman-Wunsch
Similarity matrix | BLOSUM-62
SS fraction | 0.3
Gap open (HH/SS/other) | 18/18/6
Gap extend | 1
SS matrix | | | H | S | O
---|---|---|---
H | 6 | -9 | -6
S | | 6 | -6
O | | | 4
Iteration cutoff | 2
Matchmaker GTR1_I3M_6.0_1856.pdb, chain B (#2) with GTR1_pOHB_6.0_1237.pdb,
chain B (#1), sequence alignment score = 2790.8
RMSD between 537 pruned atom pairs is 0.377 angstroms; (across all 545 pairs:
0.783)
> matchmaker #3 to #2
Parameters
---
Chain pairing | bb
Alignment algorithm | Needleman-Wunsch
Similarity matrix | BLOSUM-62
SS fraction | 0.3
Gap open (HH/SS/other) | 18/18/6
Gap extend | 1
SS matrix | | | H | S | O
---|---|---|---
H | 6 | -9 | -6
S | | 6 | -6
O | | | 4
Iteration cutoff | 2
Matchmaker GTR1_I3M_6.0_1856.pdb, chain B (#2) with GTR1_4MTB_6.0_1855.pdb,
chain B (#3), sequence alignment score = 2775
RMSD between 538 pruned atom pairs is 0.380 angstroms; (across all 545 pairs:
0.772)
> hide :2-70 cartoons
> hide :2-700 cartoons
> hide :2-700 cartoons,atoms
> hide H
> open /Users/gyoon9/Documents/Phenix/GTR1/pOHB_IF/J1374-coot-1.pdb
Chain information for J1374-coot-1.pdb #4
---
Chain | Description
B | No description available
> close #1
> matchmaker #4 to 2#
Invalid "to" argument: invalid atoms specifier
> matchmaker #4 to #2
Parameters
---
Chain pairing | bb
Alignment algorithm | Needleman-Wunsch
Similarity matrix | BLOSUM-62
SS fraction | 0.3
Gap open (HH/SS/other) | 18/18/6
Gap extend | 1
SS matrix | | | H | S | O
---|---|---|---
H | 6 | -9 | -6
S | | 6 | -6
O | | | 4
Iteration cutoff | 2
Matchmaker GTR1_I3M_6.0_1856.pdb, chain B (#2) with J1374-coot-1.pdb, chain B
(#4), sequence alignment score = 2777
RMSD between 538 pruned atom pairs is 0.388 angstroms; (across all 545 pairs:
0.777)
> hide H
> hide :2-700 cartoons,atoms
> lighting flat
> graphics silhouettes false
> graphics silhouettes true
> lighting soft
> lighting full
> lighting flat
> color #2:1 #89D973
> color #4:1 #28331A
> color #4:701 #28331A
> color #4:701 #5C7346
> color #3:1 #4f79cb
> color byhetero a
Expected a collection of one of 'All', 'atoms', 'bonds', 'cartoons', 'labels',
'models', 'pseudobonds', 'ribbons', 'rings', or 'surfaces' or a keyword
> color byhetero
> show :196, 513
> show :79,196, 513
> hide H
> select :2-700
13577 atoms, 13897 bonds, 1652 residues, 3 models selected
> transparency sel 60 a
Expected a collection of one of 'All', 'atoms', 'bonds', 'cartoons', 'labels',
'models', 'pseudobonds', 'ribbons', 'rings', or 'surfaces' or a keyword
> transparency sel 60 atoms
> select subtract
Nothing selected
> select add #2
4567 atoms, 4682 bonds, 548 residues, 1 model selected
> preset "molecular surfaces" "ghostly white"
Using preset: Molecular Surfaces / Ghostly White
Changed 0 atom styles
Preset expands to these ChimeraX commands:
style (protein|nucleic|solvent) & @@draw_mode=0 stick
surface
color white targ s trans 80
> hide surfaces
> select subtract #2
1 model selected
> color #2 #98f088ff
> color #2 #98f08878
> undo
> color :2-280 #4f79cb
> color :281-700 #a0dbe8
> color byhetero
> select :79,196,513@n,o,c
27 atoms, 9 bonds, 9 residues, 3 models selected
> select :79,196,513@n,o,c,ca
36 atoms, 27 bonds, 9 residues, 3 models selected
> hide sel
> show :65-97,175-206,499-527 cartoons
> cartoon style modeHelix default arrows true arrowsHelix false arrowScale 1
> width 1.0 thickness 0.3 sides 12 divisions 20
> show :79,196,513@n,o,c,ca
> select :79,196,513@n,o,c,
Expected an objects specifier or a keyword
> select :79,196,513@n,o,c
27 atoms, 9 bonds, 9 residues, 3 models selected
> select add #2
4585 atoms, 4688 bonds, 554 residues, 6 models selected
> select add #3
9142 atoms, 9346 bonds, 1113 residues, 6 models selected
> select add #4
13699 atoms, 14021 bonds, 1656 residues, 6 models selected
> select subtract #4
9133 atoms, 9343 bonds, 1110 residues, 5 models selected
> select subtract #3
4567 atoms, 4682 bonds, 548 residues, 3 models selected
> select subtract #2
1 model selected
> transparency 70 cartoons
> hide :91-97
> hide :92-97 cartoons
> show :359-393 cartoons
> show :530-560
> show :530-560 cartoons
> hide :530-560 atoms
> hide :359-393 cartoons
> show :359-393 cartoons
> ui tool show "Side View"
> save /Users/gyoon9/Desktop/image55.png supersample 3
> open "/Users/gyoon9/Documents/Final structures/GTR1_pOHB_6.0_1374.mrc"
Opened GTR1_pOHB_6.0_1374.mrc as #1, grid size 240,240,240, pixel 0.901, shown
at level 0.0967, step 1, values float32
> open "/Users/gyoon9/Documents/Final structures/GTR1_I3M_6.0_1856.mrc"
Opened GTR1_I3M_6.0_1856.mrc as #5, grid size 320,320,320, pixel 0.705, shown
at level 0.0525, step 2, values float32
> open "/Users/gyoon9/Documents/Final structures/GTR1_4MTB_6.0_1855.mrc"
Opened GTR1_4MTB_6.0_1855.mrc as #6, grid size 240,240,240, pixel 0.901, shown
at level 0.0682, step 1, values float32
> volume #1 level 0.4737
> volume #5 level 0.1444
> volume #6 level 0.2357
> hide #!1 models
> hide #!2 models
> hide #!3 models
> hide #!4 models
> hide #!5 models
> hide #!6 models
> show #!1 models
> show #!4 models
> select add #4
4566 atoms, 4678 bonds, 546 residues, 1 model selected
> ui mousemode right "rotate selected models"
> view matrix models
> #4,-0.37076,0.77006,0.51918,5.2657,-0.39599,0.37459,-0.83838,212.75,-0.84008,-0.51642,0.16605,235.88
> view matrix models
> #4,0.96867,0.24833,0.004466,-22.842,-0.24656,0.96363,-0.10307,44.89,-0.029898,0.098736,0.99466,-18.002
> view matrix models
> #4,0.93675,0.24748,0.24748,-47.224,-0.22247,0.96692,-0.12482,44.384,-0.27018,0.061864,0.96082,16.376
> view matrix models
> #4,0.57169,0.52167,0.63327,-82.807,-0.1486,0.82491,-0.54538,100.83,-0.8069,0.21769,0.54912,104.81
> show cartoons
> view matrix models
> #4,0.98542,0.029318,0.16762,-18.171,0.0010469,0.98398,-0.17826,25.325,-0.17016,0.17583,0.9696,-5.6697
> ui mousemode right "translate selected models"
> view matrix models
> #4,0.98542,0.029318,0.16762,-17.692,0.0010469,0.98398,-0.17826,19.417,-0.17016,0.17583,0.9696,2.8606
> fitmap #4 inMap #1
Fit molecule J1374-coot-1.pdb (#4) to map GTR1_pOHB_6.0_1374.mrc (#1) using
4566 atoms
average map value = 0.8043, steps = 120
shifted from previous position = 3.34
rotated from previous position = 14.2 degrees
atoms outside contour = 1404, contour level = 0.47373
Position of J1374-coot-1.pdb (#4) relative to GTR1_pOHB_6.0_1374.mrc (#1)
coordinates:
Matrix rotation and translation
0.99999996 -0.00011119 0.00025660 -0.01075420
0.00011127 0.99999994 -0.00032196 0.01170214
-0.00025656 0.00032199 0.99999992 -0.00669067
Axis 0.75498411 0.60164358 0.26081409
Axis point 0.00000000 18.50272888 41.61955601
Rotation angle (degrees) 0.02443487
Shift along axis -0.00282375
> hide #!4 models
> select subtract #4
1 model selected
> hide #!1 models
> show #!2 models
> show #!5 models
> volume #5 level 0.1683
> hide #!5 models
> hide #!2 models
> show #!3 models
> show #!6 models
> vop flip #6
Opened GTR1_4MTB_6.0_1855.mrc z flip as #7, grid size 240,240,240, pixel
0.901, shown at step 1, values float32
> volume #7 level 0.533
> select add #3
4566 atoms, 4661 bonds, 562 residues, 1 model selected
> view matrix models
> #3,0.99876,-0.020469,0.045408,1.9639,-0.0028561,0.88662,0.46249,-37.945,-0.049726,-0.46205,0.88546,73.496
> ui mousemode right "rotate selected models"
> view matrix models
> #3,0.97756,-0.18766,-0.095748,37.22,0.19279,0.9801,0.047369,-27.615,0.084953,-0.064765,0.99428,3.5003
> view matrix models
> #3,0.98183,-0.18145,-0.055541,31.975,0.18438,0.98141,0.05326,-27.438,0.044844,-0.062534,0.99703,7.3706
> ui mousemode right "translate selected models"
> view matrix models
> #3,0.98183,-0.18145,-0.055541,27.74,0.18438,0.98141,0.05326,-24.333,0.044844,-0.062534,0.99703,3.3331
> fitmap #3 inMap #7
Fit molecule GTR1_4MTB_6.0_1855.pdb (#3) to map GTR1_4MTB_6.0_1855.mrc z flip
(#7) using 4566 atoms
average map value = 0.3852, steps = 88
shifted from previous position = 1.32
rotated from previous position = 11.4 degrees
atoms outside contour = 3203, contour level = 0.53304
Position of GTR1_4MTB_6.0_1855.pdb (#3) relative to GTR1_4MTB_6.0_1855.mrc z
flip (#7) coordinates:
Matrix rotation and translation
1.00000000 -0.00002406 0.00002923 -0.00548832
0.00002406 1.00000000 0.00005577 -0.01505446
-0.00002923 -0.00005577 1.00000000 0.02147230
Axis -0.82736894 0.43368499 0.35690051
Axis point 0.00000000 348.69771816 314.09231327
Rotation angle (degrees) 0.00386198
Shift along axis 0.00567545
> select subtract #3
1 model selected
> hide #!3 models
> hide #!7 models
> hide :1-700 atoms,cartoons
> show #!1 models
> show #!4 models
> volume #1 level 2.028
===== Log before crash end =====
Log:
UCSF ChimeraX version: 1.11.dev202508050120 (2025-08-05)
© 2016-2025 Regents of the University of California. All rights reserved.
How to cite UCSF ChimeraX
OpenGL version: 4.1 Metal - 83.1
OpenGL renderer: Apple M1 Pro
OpenGL vendor: Apple
Python: 3.11.9
Locale: UTF-8
Qt version: PyQt6 6.9.1, Qt 6.9.0
Qt runtime version: 6.9.1
Qt platform: cocoa
Hardware:
Hardware Overview:
Model Name: MacBook Pro
Model Identifier: MacBookPro18,3
Model Number: Z15G004X2KH/A
Chip: Apple M1 Pro
Total Number of Cores: 8 (6 performance and 2 efficiency)
Memory: 32 GB
System Firmware Version: 11881.121.1
OS Loader Version: 8422.141.2.700.1
Software:
System Software Overview:
System Version: macOS 13.7.6 (22H625)
Kernel Version: Darwin 22.6.0
Time since boot: 16 days, 35 minutes
Graphics/Displays:
Apple M1 Pro:
Chipset Model: Apple M1 Pro
Type: GPU
Bus: Built-In
Total Number of Cores: 14
Vendor: Apple (0x106b)
Metal Support: Metal 3
Displays:
LG ULTRAWIDE:
Resolution: 2560 x 1080 (UW-UXGA - Ultra Wide - Ultra Extended Graphics Array)
UI Looks like: 2560 x 1080 @ 60.00Hz
Main Display: Yes
Mirror: Off
Online: Yes
Rotation: Supported
Color LCD:
Display Type: Built-in Liquid Retina XDR Display
Resolution: 3024 x 1964 Retina
Mirror: Off
Online: Yes
Automatically Adjust Brightness: Yes
Connection Type: Internal
Installed Packages:
alabaster: 1.0.0
appdirs: 1.4.4
appnope: 0.1.4
asttokens: 3.0.0
babel: 2.17.0
beautifulsoup4: 4.13.4
blockdiag: 3.0.0
blosc2: 3.6.1
build: 1.2.2.post1
certifi: 2025.7.14
cftime: 1.6.4.post1
charset-normalizer: 3.4.2
ChimeraX-AddCharge: 1.5.19
ChimeraX-AddH: 2.2.7
ChimeraX-AlignmentAlgorithms: 2.0.2
ChimeraX-AlignmentHdrs: 3.6.1
ChimeraX-AlignmentMatrices: 2.1
ChimeraX-Alignments: 3.0
ChimeraX-AlphaFold: 1.0.1
ChimeraX-AltlocExplorer: 1.1.2
ChimeraX-AmberInfo: 1.0
ChimeraX-Aniso: 1.3.2
ChimeraX-Arrays: 1.1
ChimeraX-Atomic: 1.60.10
ChimeraX-AtomicLibrary: 14.1.21
ChimeraX-AtomSearch: 2.0.1
ChimeraX-AxesPlanes: 2.4
ChimeraX-BasicActions: 1.1.3
ChimeraX-BILD: 1.0
ChimeraX-BlastProtein: 3.0.0
ChimeraX-Boltz: 1.1
ChimeraX-BondRot: 2.0.4
ChimeraX-BugReporter: 1.0.2
ChimeraX-BuildStructure: 2.13.1
ChimeraX-Bumps: 1.0
ChimeraX-BundleBuilder: 1.5.1
ChimeraX-ButtonPanel: 1.0.1
ChimeraX-CageBuilder: 1.0.1
ChimeraX-CellPack: 1.0
ChimeraX-Centroids: 1.4
ChimeraX-ChangeChains: 1.1
ChimeraX-CheckWaters: 1.5
ChimeraX-ChemGroup: 2.0.2
ChimeraX-Clashes: 2.3
ChimeraX-ColorActions: 1.0.5
ChimeraX-ColorGlobe: 1.0
ChimeraX-ColorKey: 1.5.8
ChimeraX-CommandLine: 1.3.0
ChimeraX-ConnectStructure: 2.0.1
ChimeraX-Contacts: 1.0.1
ChimeraX-Core: 1.11.dev202508050120
ChimeraX-CoreFormats: 1.2
ChimeraX-coulombic: 1.4.5
ChimeraX-Crosslinks: 1.0
ChimeraX-Crystal: 1.0
ChimeraX-CrystalContacts: 1.0.1
ChimeraX-DataFormats: 1.2.4
ChimeraX-Dicom: 1.2.7
ChimeraX-DistMonitor: 1.4.2
ChimeraX-DockPrep: 1.1.4
ChimeraX-Dssp: 2.0
ChimeraX-EMDB-SFF: 1.0
ChimeraX-ESMFold: 1.0
ChimeraX-FileHistory: 1.0.1
ChimeraX-FunctionKey: 1.0.1
ChimeraX-Geometry: 1.3
ChimeraX-gltf: 1.0
ChimeraX-Graphics: 1.4.1
ChimeraX-Hbonds: 2.5.3
ChimeraX-Help: 1.3
ChimeraX-HKCage: 1.3
ChimeraX-IHM: 1.1
ChimeraX-ImageFormats: 1.2
ChimeraX-IMOD: 1.0
ChimeraX-IO: 1.0.4
ChimeraX-ItemsInspection: 1.0.1
ChimeraX-IUPAC: 1.0
ChimeraX-KVFinder: 1.7.1
ChimeraX-Label: 1.1.14
ChimeraX-ListInfo: 1.2.2
ChimeraX-Log: 1.2
ChimeraX-LookingGlass: 1.1
ChimeraX-Maestro: 1.9.1
ChimeraX-Map: 1.3
ChimeraX-MapData: 2.0
ChimeraX-MapEraser: 1.0.1
ChimeraX-MapFilter: 2.0.1
ChimeraX-MapFit: 2.0
ChimeraX-MapSeries: 2.1.1
ChimeraX-Markers: 1.0.1
ChimeraX-Mask: 1.0.2
ChimeraX-MatchAlign: 1.0
ChimeraX-MatchMaker: 2.2.2
ChimeraX-MCopy: 1.0
ChimeraX-MDcrds: 2.15
ChimeraX-MedicalToolbar: 1.1
ChimeraX-Meeting: 1.0.1
ChimeraX-Minimize: 1.2
ChimeraX-MLP: 1.1.1
ChimeraX-mmCIF: 2.16
ChimeraX-MMTF: 2.2
ChimeraX-ModelArchive: 1.0
ChimeraX-Modeller: 1.5.22
ChimeraX-ModelPanel: 1.5.1
ChimeraX-ModelSeries: 1.0.1
ChimeraX-Mol2: 2.0.3
ChimeraX-Mole: 1.0
ChimeraX-Morph: 1.0.2
ChimeraX-MouseModes: 1.2
ChimeraX-Movie: 1.0.1
ChimeraX-MutationScores: 1.0
ChimeraX-Neuron: 1.0
ChimeraX-Nifti: 1.2
ChimeraX-NMRSTAR: 1.0.2
ChimeraX-NRRD: 1.2
ChimeraX-Nucleotides: 2.0.3
ChimeraX-OpenCommand: 1.15.1
ChimeraX-OrthoPick: 1.0.1
ChimeraX-PDB: 2.7.10
ChimeraX-PDBBio: 1.0.1
ChimeraX-PDBLibrary: 1.0.4
ChimeraX-PDBMatrices: 1.0
ChimeraX-PickBlobs: 1.0.1
ChimeraX-Positions: 1.0
ChimeraX-PresetMgr: 1.1.3
ChimeraX-ProfileGrids: 1.1.4
ChimeraX-PubChem: 2.2
ChimeraX-ReadPbonds: 1.0.1
ChimeraX-Registration: 1.1.2
ChimeraX-RemoteControl: 1.0
ChimeraX-RenderByAttr: 1.6.4
ChimeraX-RenumberResidues: 1.1
ChimeraX-ResidueFit: 1.0.1
ChimeraX-RestServer: 1.3.1
ChimeraX-RNALayout: 1.0
ChimeraX-RotamerLibMgr: 4.0
ChimeraX-RotamerLibsDunbrack: 2.0
ChimeraX-RotamerLibsDynameomics: 2.0
ChimeraX-RotamerLibsRichardson: 2.0
ChimeraX-SaveCommand: 1.5.2
ChimeraX-SchemeMgr: 1.0
ChimeraX-SDF: 2.0.3
ChimeraX-Segger: 1.0
ChimeraX-Segment: 1.0.1
ChimeraX-Segmentations: 3.5.7
ChimeraX-SelInspector: 1.0
ChimeraX-SeqView: 2.17.2
ChimeraX-Shape: 1.1
ChimeraX-Shell: 1.0.1
ChimeraX-Shortcuts: 1.2.1
ChimeraX-ShowSequences: 1.0.3
ChimeraX-SideView: 1.0.1
ChimeraX-SimilarStructures: 1.0.1
ChimeraX-Smiles: 2.1.2
ChimeraX-SmoothLines: 1.0
ChimeraX-SpaceNavigator: 1.0
ChimeraX-StdCommands: 1.19.1
ChimeraX-STL: 1.0.1
ChimeraX-Storm: 1.0
ChimeraX-StructMeasure: 1.2.1
ChimeraX-Struts: 1.0.1
ChimeraX-Surface: 1.0.1
ChimeraX-SwapAA: 2.0.1
ChimeraX-SwapRes: 2.5.2
ChimeraX-TapeMeasure: 1.0
ChimeraX-TaskManager: 1.0
ChimeraX-Test: 1.0
ChimeraX-Toolbar: 1.2.3
ChimeraX-ToolshedUtils: 1.2.4
ChimeraX-Topography: 1.0
ChimeraX-ToQuest: 1.0
ChimeraX-Tug: 1.0.1
ChimeraX-UI: 1.47
ChimeraX-Umap: 1.0
ChimeraX-uniprot: 2.3.1
ChimeraX-UnitCell: 1.0.1
ChimeraX-ViewDock: 1.2
ChimeraX-VIPERdb: 1.0
ChimeraX-Vive: 1.1
ChimeraX-VolumeMenu: 1.0.1
ChimeraX-vrml: 1.0
ChimeraX-VTK: 1.0
ChimeraX-WavefrontOBJ: 1.0
ChimeraX-WebCam: 1.0.2
ChimeraX-WebServices: 1.1.5
ChimeraX-Zone: 1.0.1
colorama: 0.4.6
comm: 0.2.3
contourpy: 1.3.3
coverage: 7.10.2
cxservices: 1.2.3
cycler: 0.12.1
Cython: 3.1.2
debugpy: 1.8.15
decorator: 5.2.1
docutils: 0.21.2
executing: 2.2.0
filelock: 3.18.0
fonttools: 4.59.0
funcparserlib: 2.0.0a0
glfw: 2.9.0
grako: 3.16.5
h5py: 3.14.0
html2text: 2024.2.26
idna: 3.10
ihm: 2.2
imagecodecs: 2024.6.1
imagesize: 1.4.1
iniconfig: 2.1.0
ipykernel: 6.29.5
ipython: 8.26.0
ipywidgets: 8.1.7
jedi: 0.19.1
Jinja2: 3.1.6
jupyter_client: 8.6.3
jupyter_core: 5.8.1
jupyterlab_widgets: 3.0.15
kiwisolver: 1.4.8
line_profiler: 5.0.0
lxml: 5.3.1
lz4: 4.3.2
Markdown: 3.8.2
MarkupSafe: 3.0.2
matplotlib: 3.10.1
matplotlib-inline: 0.1.7
msgpack: 1.1.0
ndindex: 1.10.0
nest-asyncio: 1.6.0
netCDF4: 1.6.5
networkx: 3.3
nibabel: 5.2.0
nptyping: 2.5.0
numexpr: 2.11.0
numpy: 1.26.4
OpenMM: 8.2.0
openvr: 1.26.701
packaging: 24.2
ParmEd: 4.2.2
parso: 0.8.4
pep517: 0.13.1
pexpect: 4.9.0
pickleshare: 0.7.5
pillow: 10.4.0
pip: 25.2
pkginfo: 1.11.1
platformdirs: 4.3.8
pluggy: 1.6.0
prompt_toolkit: 3.0.51
psutil: 7.0.0
ptyprocess: 0.7.0
pure_eval: 0.2.3
py-cpuinfo: 9.0.0
pycollada: 0.8
pydicom: 2.4.4
Pygments: 2.18.0
pynmrstar: 3.3.5
pynrrd: 1.0.0
PyOpenGL: 3.1.9
PyOpenGL-accelerate: 3.1.9
pyopenxr: 1.1.4501
pyparsing: 3.2.3
pyproject_hooks: 1.2.0
PyQt6-commercial: 6.9.1
PyQt6-Qt6: 6.9.1
PyQt6-WebEngine-commercial: 6.9.0
PyQt6-WebEngine-Qt6: 6.9.1
PyQt6_sip: 13.10.2
pytest: 8.4.1
pytest-cov: 6.2.1
python-dateutil: 2.9.0.post0
pytz: 2025.2
pyzmq: 27.0.1
qtconsole: 5.5.2
QtPy: 2.4.3
qtshim: 1.1
RandomWords: 0.4.0
requests: 2.32.4
roman-numerals-py: 3.1.0
scipy: 1.14.0
setuptools: 80.9.0
sfftk-rw: 0.8.1
six: 1.17.0
snowballstemmer: 3.0.1
sortedcontainers: 2.4.0
soupsieve: 2.7
Sphinx: 8.2.3
sphinx-autodoc-typehints: 3.1.0
sphinxcontrib-applehelp: 2.0.0
sphinxcontrib-blockdiag: 3.0.0
sphinxcontrib-devhelp: 2.0.0
sphinxcontrib-htmlhelp: 2.1.0
sphinxcontrib-jsmath: 1.0.1
sphinxcontrib-qthelp: 2.0.0
sphinxcontrib-serializinghtml: 2.0.0
stack-data: 0.6.3
superqt: 0.7.5
tables: 3.10.2
tcia_utils: 1.5.1
tifffile: 2025.3.13
tinyarray: 1.2.5
tornado: 6.5.1
traitlets: 5.14.3
typing_extensions: 4.14.1
tzdata: 2025.2
urllib3: 2.5.0
wcwidth: 0.2.13
webcolors: 24.11.1
wheel: 0.45.1
wheel-filename: 1.4.2
widgetsnbextension: 4.0.14
Change History (3)
comment:1 by , 8 weeks ago
| Cc: | added |
|---|---|
| Component: | Unassigned → Window Toolkit |
| Owner: | set to |
| Platform: | → all |
| Project: | → ChimeraX |
| Status: | new → assigned |
| Summary: | ChimeraX bug report submission → Crash involving QWindowContainer::parentWasChanged |
comment:2 by , 8 weeks ago
| Summary: | Crash involving QWindowContainer::parentWasChanged → Crash deleting a QDockWidget involving QWindowContainer::parentWasChanged |
|---|
comment:3 by , 8 weeks ago
Note:
See TracTickets
for help on using tickets.
Unlike #18630, this crash is with PyQt and does not involve Render By Attribute AFAICT, so perhaps this is a Qt 6.9 problem rather than a wrapper problem.