Opened 7 years ago
Closed 7 years ago
#1839 closed defect (fixed)
Modeller interface option using wrong settings name
| Reported by: | Elaine Meng | Owned by: | Eric Pettersen |
|---|---|---|---|
| Priority: | normal | Milestone: | |
| Component: | Sequence | Version: | |
| Keywords: | Cc: | ||
| Blocked By: | Blocking: | ||
| Notify when closed: | Platform: | all | |
| Project: | ChimeraX |
Description
The following bug report has been submitted:
Platform: Darwin-18.5.0-x86_64-i386-64bit
ChimeraX Version: 0.9 (2019-04-10)
Description
unchecking Modeller "Make multichain" setting immediately causes traceback
Log:
> open /Users/meng/Desktop/startup.cxc
> alias reset view orient; view initial
> open presets.cxc
> alias cardef car style modeh def arrows t arrowshelix f arrowscale 2 wid 2
thick 0.4 sides 12 div 20; car style ~(nucleic|strand) x round; car style
(nucleic|strand) x rect
> alias nospheres style (protein|nucleic|solvent) & @@draw_mode=0 stick
> alias nucrib cardef; car style nucleic x round width 1.6 thick 1.6
> alias cylinders cardef; car style protein modeh tube rad 2 sides 24 thick
0.6
> alias licorice cardef; car style protein modeh default arrows f x round
width 1 thick 1
> alias cartoon1 surf hide; nospheres; cartoon; cardef; nuc tube/slab shape
box
> alias cartoon2 surf hide; nospheres; cartoon; cylinders; car style nucleic x
round width 1.6 thick 1.6; nuc stubs
> alias cartoon3 surf hide; nospheres; cartoon; licorice; car style nucleic x
round width 1.6 thick 1.6; nuc tube/slab shape ellipsoid
> alias surfw nospheres; surface; color white targ s trans 80
> alias surfat nospheres; surface; color fromatoms targ s trans 70
> alias surfc nospheres; surface; color bychain targ s trans 0
> alias surfm nospheres; surface; color bymodel targ s trans 0
> alias pub set bgcolor white silhouettes t
> alias unpub ~set bgcolor; set silhouettes f
executed presets.cxc
executed startup.cxc
UCSF ChimeraX version: 0.9 (2019-04-10)
© 2016-2019 Regents of the University of California. All rights reserved.
How to cite UCSF ChimeraX
> open /Users/meng/Desktop/enolmod.cxs format session
Summary of feedback from opening /Users/meng/Desktop/enolmod.cxs
---
notes | Associated 1muc chain A to mleipp with 5 mismatches
Associated 1muc chain B to mleipp with 5 mismatches
Associated 4enl chain A to enolyeast with 0 mismatches
opened ChimeraX session
> toolshed show '"Modeller Comparative"'
Traceback (most recent call last):
File
"/Users/meng/Desktop/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-
packages/chimerax/ui/options/options.py", line 195, in <lambda>
self.widget.clicked.connect(lambda state, s=self: s.make_callback())
File
"/Users/meng/Desktop/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-
packages/chimerax/ui/options/options.py", line 168, in make_callback
self.set_attribute()
File
"/Users/meng/Desktop/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-
packages/chimerax/ui/options/options.py", line 141, in set_attribute
setattr(self.settings, self.attr_name, self.value)
File
"/Users/meng/Desktop/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-
packages/chimerax/core/settings.py", line 193, in __setattr__
ConfigFile.__setattr__(self, name, value)
File
"/Users/meng/Desktop/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-
packages/chimerax/core/configfile.py", line 342, in __setattr__
raise AttributeError("Unknown property name: %s" % name)
AttributeError: Unknown property name: combine_templates
AttributeError: Unknown property name: combine_templates
File
"/Users/meng/Desktop/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-
packages/chimerax/core/configfile.py", line 342, in __setattr__
raise AttributeError("Unknown property name: %s" % name)
See log for complete Python traceback.
OpenGL version: 4.1 INTEL-12.8.38
OpenGL renderer: Intel Iris Pro OpenGL Engine
OpenGL vendor: Intel Inc.
Change History (2)
comment:1 by , 7 years ago
| Component: | Unassigned → Sequence |
|---|---|
| Owner: | set to |
| Platform: | → all |
| Project: | → ChimeraX |
| Status: | new → accepted |
| Summary: | ChimeraX bug report submission → Modeller interface option using wrong settings name |
comment:2 by , 7 years ago
| Resolution: | → fixed |
|---|---|
| Status: | accepted → closed |
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