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#18135 feedback defect

Crash in event loop

Reported by:	yjscxc2018@…	Owned by:	Eric Pettersen
Priority:	normal	Milestone:
Component:	Core	Version:
Keywords:		Cc:
Blocked By:		Blocking:
Notify when closed:		Platform:	all
Project:	ChimeraX

Description

The following bug report has been submitted:
Platform:        Windows-10-10.0.22631
ChimeraX Version: 1.10rc202505210000 (2025-05-21 00:00:04 UTC)
Description
Last time you used ChimeraX it crashed.
Please describe steps that led to the crash here.
Windows fatal exception: code 0x8001010d

Thread 0x0000646c (most recent call first):
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 320 in wait
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 622 in wait
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\multiprocessing\pool.py", line 765 in wait
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\multiprocessing\pool.py", line 768 in get
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\site-packages\chimerax\core\toolshed\__init__.py", line 1678 in run
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\site-packages\chimerax\core\tasks.py", line 300 in _run_function
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 975 in run
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 1038 in _bootstrap_inner
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 995 in _bootstrap

Thread 0x0000516c (most recent call first):
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\multiprocessing\pool.py", line 579 in _handle_results
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 975 in run
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 1038 in _bootstrap_inner
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 995 in _bootstrap

Thread 0x00004f68 (most recent call first):
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\multiprocessing\pool.py", line 531 in _handle_tasks
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 975 in run
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 1038 in _bootstrap_inner
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 995 in _bootstrap

Thread 0x00006f9c (most recent call first):
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\multiprocessing\connection.py", line 810 in _exhaustive_wait
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\multiprocessing\connection.py", line 878 in wait
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\multiprocessing\pool.py", line 502 in _wait_for_updates
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\multiprocessing\pool.py", line 522 in _handle_workers
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 975 in run
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 1038 in _bootstrap_inner
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 995 in _bootstrap

Thread 0x00006488 (most recent call first):
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\multiprocessing\pool.py", line 114 in worker
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 975 in run
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 1038 in _bootstrap_inner
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 995 in _bootstrap

Thread 0x000061a0 (most recent call first):
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\multiprocessing\pool.py", line 114 in worker
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 975 in run
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 1038 in _bootstrap_inner
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 995 in _bootstrap

Thread 0x00006f7c (most recent call first):
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\multiprocessing\pool.py", line 114 in worker
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 975 in run
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 1038 in _bootstrap_inner
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 995 in _bootstrap

Thread 0x00007258 (most recent call first):
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\multiprocessing\pool.py", line 114 in worker
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 975 in run
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 1038 in _bootstrap_inner
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 995 in _bootstrap

Thread 0x00004dec (most recent call first):
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\multiprocessing\pool.py", line 114 in worker
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 975 in run
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 1038 in _bootstrap_inner
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 995 in _bootstrap

Thread 0x00005300 (most recent call first):
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\multiprocessing\pool.py", line 114 in worker
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 975 in run
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 1038 in _bootstrap_inner
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 995 in _bootstrap

Thread 0x00006e60 (most recent call first):
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\multiprocessing\pool.py", line 114 in worker
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 975 in run
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 1038 in _bootstrap_inner
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 995 in _bootstrap

Thread 0x00005eec (most recent call first):
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\multiprocessing\pool.py", line 114 in worker
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 975 in run
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 1038 in _bootstrap_inner
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 995 in _bootstrap

Thread 0x00003648 (most recent call first):
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\multiprocessing\pool.py", line 114 in worker
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 975 in run
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 1038 in _bootstrap_inner
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 995 in _bootstrap

Thread 0x00001138 (most recent call first):
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\multiprocessing\pool.py", line 114 in worker
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 975 in run
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 1038 in _bootstrap_inner
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 995 in _bootstrap

Thread 0x00004f10 (most recent call first):
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\multiprocessing\pool.py", line 114 in worker
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 975 in run
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 1038 in _bootstrap_inner
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 995 in _bootstrap

Thread 0x00002464 (most recent call first):
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\multiprocessing\pool.py", line 114 in worker
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 975 in run
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 1038 in _bootstrap_inner
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 995 in _bootstrap

Thread 0x0000356c (most recent call first):
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\multiprocessing\pool.py", line 114 in worker
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 975 in run
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 1038 in _bootstrap_inner
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 995 in _bootstrap

Thread 0x00005a28 (most recent call first):
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\multiprocessing\pool.py", line 114 in worker
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 975 in run
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 1038 in _bootstrap_inner
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 995 in _bootstrap

Thread 0x00001d14 (most recent call first):
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\multiprocessing\pool.py", line 114 in worker
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 975 in run
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 1038 in _bootstrap_inner
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 995 in _bootstrap

Thread 0x00006c14 (most recent call first):
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\multiprocessing\pool.py", line 114 in worker
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 975 in run
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 1038 in _bootstrap_inner
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 995 in _bootstrap

Thread 0x00004678 (most recent call first):
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\multiprocessing\pool.py", line 114 in worker
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 975 in run
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 1038 in _bootstrap_inner
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 995 in _bootstrap

Thread 0x000001cc (most recent call first):
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\multiprocessing\pool.py", line 114 in worker
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 975 in run
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 1038 in _bootstrap_inner
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 995 in _bootstrap

Thread 0x00006e2c (most recent call first):
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\multiprocessing\pool.py", line 114 in worker
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 975 in run
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 1038 in _bootstrap_inner
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 995 in _bootstrap

Thread 0x00004880 (most recent call first):
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\socket.py", line 962 in getaddrinfo
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\site-packages\urllib3\util\connection.py", line 60 in create_connection
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\site-packages\urllib3\connection.py", line 198 in _new_conn
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\site-packages\urllib3\connection.py", line 276 in connect
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\http\client.py", line 979 in send
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\http\client.py", line 1041 in _send_output
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\http\client.py", line 1281 in endheaders
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\site-packages\urllib3\connection.py", line 445 in request
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\site-packages\urllib3\connectionpool.py", line 493 in _make_request
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\site-packages\urllib3\connectionpool.py", line 787 in urlopen
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\site-packages\urllib3\poolmanager.py", line 443 in urlopen
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\site-packages\urllib3\_request_methods.py", line 182 in request_encode_url
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\site-packages\urllib3\_request_methods.py", line 135 in request
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\site-packages\cxservices\rest.py", line 206 in request
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\site-packages\cxservices\rest.py", line 228 in GET
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\site-packages\cxservices\api_client.py", line 341 in request
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\site-packages\cxservices\api_client.py", line 151 in __call_api
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\multiprocessing\pool.py", line 125 in worker
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 975 in run
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 1038 in _bootstrap_inner
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 995 in _bootstrap

Thread 0x00002764 (most recent call first):
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\socket.py", line 962 in getaddrinfo
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\socket.py", line 827 in create_connection
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\http\client.py", line 945 in connect
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\http\client.py", line 1451 in connect
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\http\client.py", line 979 in send
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\http\client.py", line 1041 in _send_output
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\http\client.py", line 1281 in endheaders
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\http\client.py", line 1332 in _send_request
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\http\client.py", line 1286 in request
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\urllib\request.py", line 1348 in do_open
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\urllib\request.py", line 1391 in https_open
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\urllib\request.py", line 496 in _call_chain
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\urllib\request.py", line 536 in _open
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\urllib\request.py", line 519 in open
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\urllib\request.py", line 216 in urlopen
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\site-packages\chimerax\core\toolshed\available.py", line 62 in load
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\site-packages\chimerax\core\toolshed\__init__.py", line 516 in reload_available
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 975 in run
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 1038 in _bootstrap_inner
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 995 in _bootstrap

Thread 0x00005a54 (most recent call first):
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 324 in wait
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 622 in wait
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 1392 in run
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 1038 in _bootstrap_inner
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 995 in _bootstrap

Current thread 0x00006e94 (most recent call first):
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\site-packages\chimerax\ui\gui.py", line 368 in event_loop
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\site-packages\chimerax\core\__main__.py", line 1057 in init
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\site-packages\chimerax\core\__main__.py", line 1220 in 
  File "", line 88 in _run_code
  File "", line 198 in _run_module_as_main
Windows fatal exception: access violation

Thread 0x0000516c (most recent call first):
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\multiprocessing\pool.py", line 579 in _handle_results
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 975 in run
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 1038 in _bootstrap_inner
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 995 in _bootstrap

Thread 0x00004f68 (most recent call first):
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\multiprocessing\pool.py", line 531 in _handle_tasks
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 975 in run
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 1038 in _bootstrap_inner
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 995 in _bootstrap

Thread 0x00006f9c (most recent call first):
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\multiprocessing\connection.py", line 810 in _exhaustive_wait
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\multiprocessing\connection.py", line 878 in wait
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\multiprocessing\pool.py", line 502 in _wait_for_updates
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\multiprocessing\pool.py", line 522 in _handle_workers
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 975 in run
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 1038 in _bootstrap_inner
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 995 in _bootstrap

Thread 0x00006488 (most recent call first):
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\multiprocessing\pool.py", line 114 in worker
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 975 in run
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 1038 in _bootstrap_inner
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 995 in _bootstrap

Thread 0x000061a0 (most recent call first):
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\multiprocessing\pool.py", line 114 in worker
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 975 in run
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 1038 in _bootstrap_inner
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 995 in _bootstrap

Thread 0x00006f7c (most recent call first):
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\multiprocessing\pool.py", line 114 in worker
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 975 in run
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 1038 in _bootstrap_inner
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 995 in _bootstrap

Thread 0x00007258 (most recent call first):
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\multiprocessing\pool.py", line 114 in worker
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 975 in run
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 1038 in _bootstrap_inner
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 995 in _bootstrap

Thread 0x00004dec (most recent call first):
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\multiprocessing\pool.py", line 114 in worker
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 975 in run
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 1038 in _bootstrap_inner
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 995 in _bootstrap

Thread 0x00005300 (most recent call first):
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\multiprocessing\pool.py", line 114 in worker
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 975 in run
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 1038 in _bootstrap_inner
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 995 in _bootstrap

Thread 0x00006e60 (most recent call first):
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\multiprocessing\pool.py", line 114 in worker
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 975 in run
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 1038 in _bootstrap_inner
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 995 in _bootstrap

Thread 0x00005eec (most recent call first):
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\multiprocessing\pool.py", line 114 in worker
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 975 in run
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 1038 in _bootstrap_inner
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 995 in _bootstrap

Thread 0x00003648 (most recent call first):
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\multiprocessing\pool.py", line 114 in worker
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 975 in run
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 1038 in _bootstrap_inner
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 995 in _bootstrap

Thread 0x00001138 (most recent call first):
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\multiprocessing\pool.py", line 114 in worker
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 975 in run
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 1038 in _bootstrap_inner
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 995 in _bootstrap

Thread 0x00004f10 (most recent call first):
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\multiprocessing\pool.py", line 114 in worker
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 975 in run
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 1038 in _bootstrap_inner
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 995 in _bootstrap

Thread 0x00002464 (most recent call first):
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\multiprocessing\pool.py", line 114 in worker
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 975 in run
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 1038 in _bootstrap_inner
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 995 in _bootstrap

Thread 0x0000356c (most recent call first):
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\multiprocessing\pool.py", line 114 in worker
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 975 in run
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 1038 in _bootstrap_inner
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 995 in _bootstrap

Thread 0x00005a28 (most recent call first):
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\multiprocessing\pool.py", line 114 in worker
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 975 in run
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 1038 in _bootstrap_inner
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 995 in _bootstrap

Thread 0x00001d14 (most recent call first):
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\multiprocessing\pool.py", line 114 in worker
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 975 in run
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 1038 in _bootstrap_inner
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 995 in _bootstrap

Thread 0x00006c14 (most recent call first):
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\multiprocessing\pool.py", line 114 in worker
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 975 in run
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 1038 in _bootstrap_inner
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 995 in _bootstrap

Thread 0x00004678 (most recent call first):
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\multiprocessing\pool.py", line 114 in worker
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 975 in run
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 1038 in _bootstrap_inner
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 995 in _bootstrap

Thread 0x000001cc (most recent call first):
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\multiprocessing\pool.py", line 114 in worker
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 975 in run
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 1038 in _bootstrap_inner
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 995 in _bootstrap

Thread 0x00006e2c (most recent call first):
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\multiprocessing\pool.py", line 114 in worker
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 975 in run
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 1038 in _bootstrap_inner
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 995 in _bootstrap

Thread 0x00004880 (most recent call first):
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\multiprocessing\pool.py", line 114 in worker
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 975 in run
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 1038 in _bootstrap_inner
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 995 in _bootstrap

Thread 0x00002764 (most recent call first):
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\socket.py", line 497 in _real_close
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\ssl.py", line 1337 in _real_close
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\socket.py", line 503 in close
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\socket.py", line 493 in _decref_socketios
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\socket.py", line 777 in close
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\http\client.py", line 415 in _close_conn
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\http\client.py", line 487 in read
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\site-packages\chimerax\core\toolshed\available.py", line 64 in load
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\site-packages\chimerax\core\toolshed\__init__.py", line 516 in reload_available
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 975 in run
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 1038 in _bootstrap_inner
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 995 in _bootstrap

Thread 0x00005a54 (most recent call first):
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 324 in wait
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 622 in wait
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 1392 in run
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 1038 in _bootstrap_inner
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\threading.py", line 995 in _bootstrap

Current thread 0x00006e94 (most recent call first):
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\site-packages\chimerax\ui\gui.py", line 368 in event_loop
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\site-packages\chimerax\core\__main__.py", line 1057 in init
  File "D:\\u8f6f\u4ef6\Alfafold\ChimeraX 1.10rc202505210000\bin\Lib\site-packages\chimerax\core\__main__.py", line 1220 in 
  File "", line 88 in _run_code
  File "", line 198 in _run_module_as_main


Log:
UCSF ChimeraX version: 1.10rc202505210000 (2025-05-21)  
© 2016-2025 Regents of the University of California. All rights reserved.  
How to cite UCSF ChimeraX  




OpenGL version: 3.3.0 - Build 32.0.101.5542
OpenGL renderer: Intel(R) Iris(R) Xe Graphics
OpenGL vendor: Intel

Python: 3.11.4
Locale: zh_CN.cp936
Qt version: PyQt6 6.8.1, Qt 6.8.2
Qt runtime version: 6.8.2
Qt platform: windows

Manufacturer: LENOVO
Model: 21HW
OS: Microsoft Windows 11 家庭中文版 (Build 22631)
Memory: 34,071,240,704
MaxProcessMemory: 137,438,953,344
CPU: 20 13th Gen Intel(R) Core(TM) i7-13700H
OSLanguage: zh-CN

Installed Packages:
    alabaster: 1.0.0
    appdirs: 1.4.4
    asttokens: 3.0.0
    auditwheel: 6.3.0
    babel: 2.17.0
    beautifulsoup4: 4.13.3
    blockdiag: 3.0.0
    blosc2: 3.3.3
    build: 1.2.2.post1
    certifi: 2025.4.26
    cftime: 1.6.4.post1
    charset-normalizer: 3.4.2
    ChimeraX-AddCharge: 1.5.18
    ChimeraX-AddH: 2.2.7
    ChimeraX-AlignmentAlgorithms: 2.0.2
    ChimeraX-AlignmentHdrs: 3.6.1
    ChimeraX-AlignmentMatrices: 2.1
    ChimeraX-Alignments: 2.20.1
    ChimeraX-AlphaFold: 1.0.1
    ChimeraX-AltlocExplorer: 1.1.2
    ChimeraX-AmberInfo: 1.0
    ChimeraX-Aniso: 1.1.3
    ChimeraX-Arrays: 1.1
    ChimeraX-Atomic: 1.60.6
    ChimeraX-AtomicLibrary: 14.1.18
    ChimeraX-AtomSearch: 2.0.1
    ChimeraX-AxesPlanes: 2.4
    ChimeraX-BasicActions: 1.1.3
    ChimeraX-BILD: 1.0
    ChimeraX-BlastProtein: 3.0.0
    ChimeraX-Boltz: 1.0
    ChimeraX-BondRot: 2.0.4
    ChimeraX-BugReporter: 1.0.2
    ChimeraX-BuildStructure: 2.13.1
    ChimeraX-Bumps: 1.0
    ChimeraX-BundleBuilder: 1.5.1
    ChimeraX-ButtonPanel: 1.0.1
    ChimeraX-CageBuilder: 1.0.1
    ChimeraX-CellPack: 1.0
    ChimeraX-Centroids: 1.4
    ChimeraX-ChangeChains: 1.1
    ChimeraX-CheckWaters: 1.5
    ChimeraX-ChemGroup: 2.0.2
    ChimeraX-Clashes: 2.3
    ChimeraX-ColorActions: 1.0.5
    ChimeraX-ColorGlobe: 1.0
    ChimeraX-ColorKey: 1.5.8
    ChimeraX-CommandLine: 1.3
    ChimeraX-ConnectStructure: 2.0.1
    ChimeraX-Contacts: 1.0.1
    ChimeraX-Core: 1.10rc202505210000
    ChimeraX-CoreFormats: 1.2
    ChimeraX-coulombic: 1.4.5
    ChimeraX-Crosslinks: 1.0
    ChimeraX-Crystal: 1.0
    ChimeraX-CrystalContacts: 1.0.1
    ChimeraX-DataFormats: 1.2.4
    ChimeraX-Dicom: 1.2.7
    ChimeraX-DistMonitor: 1.4.2
    ChimeraX-DockPrep: 1.1.4
    ChimeraX-Dssp: 2.0
    ChimeraX-EMDB-SFF: 1.0
    ChimeraX-ESMFold: 1.0
    ChimeraX-FileHistory: 1.0.1
    ChimeraX-FunctionKey: 1.0.1
    ChimeraX-Geometry: 1.3
    ChimeraX-gltf: 1.0
    ChimeraX-Graphics: 1.4.1
    ChimeraX-Hbonds: 2.5.1
    ChimeraX-Help: 1.3
    ChimeraX-HKCage: 1.3
    ChimeraX-IHM: 1.1
    ChimeraX-ImageFormats: 1.2
    ChimeraX-IMOD: 1.0
    ChimeraX-IO: 1.0.3
    ChimeraX-ItemsInspection: 1.0.1
    ChimeraX-IUPAC: 1.0
    ChimeraX-KVFinder: 1.6.2
    ChimeraX-Label: 1.1.14
    ChimeraX-ListInfo: 1.2.2
    ChimeraX-Log: 1.2
    ChimeraX-LookingGlass: 1.1
    ChimeraX-Maestro: 1.9.1
    ChimeraX-Map: 1.3
    ChimeraX-MapData: 2.0
    ChimeraX-MapEraser: 1.0.1
    ChimeraX-MapFilter: 2.0.1
    ChimeraX-MapFit: 2.0
    ChimeraX-MapSeries: 2.1.1
    ChimeraX-Markers: 1.0.1
    ChimeraX-Mask: 1.0.2
    ChimeraX-MatchMaker: 2.2.1
    ChimeraX-MCopy: 1.0
    ChimeraX-MDcrds: 2.10.1
    ChimeraX-MedicalToolbar: 1.1
    ChimeraX-Meeting: 1.0.1
    ChimeraX-MLP: 1.1.1
    ChimeraX-mmCIF: 2.16
    ChimeraX-MMTF: 2.2
    ChimeraX-ModelArchive: 1.0
    ChimeraX-Modeller: 1.5.19
    ChimeraX-ModelPanel: 1.5.1
    ChimeraX-ModelSeries: 1.0.1
    ChimeraX-Mol2: 2.0.3
    ChimeraX-Mole: 1.0
    ChimeraX-Morph: 1.0.2
    ChimeraX-MouseModes: 1.2
    ChimeraX-Movie: 1.0
    ChimeraX-MutationScores: 1.0
    ChimeraX-Neuron: 1.0
    ChimeraX-Nifti: 1.2
    ChimeraX-NMRSTAR: 1.0.2
    ChimeraX-NRRD: 1.2
    ChimeraX-Nucleotides: 2.0.3
    ChimeraX-OpenCommand: 1.14.1
    ChimeraX-OrthoPick: 1.0.1
    ChimeraX-PDB: 2.7.10
    ChimeraX-PDBBio: 1.0.1
    ChimeraX-PDBLibrary: 1.0.4
    ChimeraX-PDBMatrices: 1.0
    ChimeraX-PickBlobs: 1.0.1
    ChimeraX-Positions: 1.0
    ChimeraX-PresetMgr: 1.1.3
    ChimeraX-ProfileGrids: 1.1.2
    ChimeraX-PubChem: 2.2
    ChimeraX-ReadPbonds: 1.0.1
    ChimeraX-Registration: 1.1.2
    ChimeraX-RemoteControl: 1.0
    ChimeraX-RenderByAttr: 1.6.3
    ChimeraX-RenumberResidues: 1.1
    ChimeraX-ResidueFit: 1.0.1
    ChimeraX-RestServer: 1.3.1
    ChimeraX-RNALayout: 1.0
    ChimeraX-RotamerLibMgr: 4.0
    ChimeraX-RotamerLibsDunbrack: 2.0
    ChimeraX-RotamerLibsDynameomics: 2.0
    ChimeraX-RotamerLibsRichardson: 2.0
    ChimeraX-SaveCommand: 1.5.1
    ChimeraX-SchemeMgr: 1.0
    ChimeraX-SDF: 2.0.3
    ChimeraX-Segger: 1.0
    ChimeraX-Segment: 1.0.1
    ChimeraX-Segmentations: 3.5.7
    ChimeraX-SelInspector: 1.0
    ChimeraX-SeqView: 2.17.1
    ChimeraX-Shape: 1.1
    ChimeraX-Shell: 1.0.1
    ChimeraX-Shortcuts: 1.2.0
    ChimeraX-ShowSequences: 1.0.3
    ChimeraX-SideView: 1.0.1
    ChimeraX-SimilarStructures: 1.0.1
    ChimeraX-Smiles: 2.1.2
    ChimeraX-SmoothLines: 1.0
    ChimeraX-SpaceNavigator: 1.0
    ChimeraX-StdCommands: 1.19.1
    ChimeraX-STL: 1.0.1
    ChimeraX-Storm: 1.0
    ChimeraX-StructMeasure: 1.2.1
    ChimeraX-Struts: 1.0.1
    ChimeraX-Surface: 1.0.1
    ChimeraX-SwapAA: 2.0.1
    ChimeraX-SwapRes: 2.5.2
    ChimeraX-TapeMeasure: 1.0
    ChimeraX-TaskManager: 1.0
    ChimeraX-Test: 1.0
    ChimeraX-Toolbar: 1.2.3
    ChimeraX-ToolshedUtils: 1.2.4
    ChimeraX-Topography: 1.0
    ChimeraX-ToQuest: 1.0
    ChimeraX-Tug: 1.0.1
    ChimeraX-UI: 1.45.1
    ChimeraX-Umap: 1.0
    ChimeraX-uniprot: 2.3.1
    ChimeraX-UnitCell: 1.0.1
    ChimeraX-ViewDockX: 1.4.4
    ChimeraX-VIPERdb: 1.0
    ChimeraX-Vive: 1.1
    ChimeraX-VolumeMenu: 1.0.1
    ChimeraX-vrml: 1.0
    ChimeraX-VTK: 1.0
    ChimeraX-WavefrontOBJ: 1.0
    ChimeraX-WebCam: 1.0.2
    ChimeraX-WebServices: 1.1.5
    ChimeraX-Zone: 1.0.1
    colorama: 0.4.6
    comm: 0.2.2
    comtypes: 1.4.10
    contourpy: 1.3.2
    coverage: 7.8.1
    cxservices: 1.2.3
    cycler: 0.12.1
    Cython: 3.0.12
    debugpy: 1.8.14
    decorator: 5.2.1
    docutils: 0.21.2
    executing: 2.2.0
    filelock: 3.18.0
    fonttools: 4.58.0
    funcparserlib: 2.0.0a0
    glfw: 2.9.0
    grako: 3.16.5
    h5py: 3.13.0
    html2text: 2024.2.26
    idna: 3.10
    ihm: 2.2
    imagecodecs: 2024.6.1
    imagesize: 1.4.1
    iniconfig: 2.1.0
    ipykernel: 6.29.5
    ipython: 8.26.0
    ipywidgets: 8.1.7
    jedi: 0.19.1
    Jinja2: 3.1.6
    jupyter_client: 8.6.3
    jupyter_core: 5.7.2
    jupyterlab_widgets: 3.0.15
    kiwisolver: 1.4.8
    line_profiler: 4.2.0
    lxml: 5.3.1
    lz4: 4.4.4
    MarkupSafe: 3.0.2
    matplotlib: 3.10.1
    matplotlib-inline: 0.1.7
    msgpack: 1.1.0
    ndindex: 1.10.0
    nest-asyncio: 1.6.0
    netCDF4: 1.6.5
    networkx: 3.3
    nibabel: 5.2.0
    nptyping: 2.5.0
    numexpr: 2.10.2
    numpy: 1.26.4
    OpenMM: 8.2.0
    openvr: 1.26.701
    packaging: 24.2
    ParmEd: 4.2.2
    parso: 0.8.4
    pep517: 0.13.1
    pickleshare: 0.7.5
    pillow: 10.4.0
    pip: 25.0.1
    pkginfo: 1.11.1
    platformdirs: 4.3.8
    pluggy: 1.6.0
    prompt_toolkit: 3.0.51
    psutil: 7.0.0
    pure_eval: 0.2.3
    py-cpuinfo: 9.0.0
    pycollada: 0.8
    pydicom: 2.4.4
    pyelftools: 0.32
    Pygments: 2.18.0
    pynmrstar: 3.3.5
    pynrrd: 1.0.0
    PyOpenGL: 3.1.9
    PyOpenGL-accelerate: 3.1.9
    pyopenxr: 1.1.4501
    pyparsing: 3.2.3
    pyproject_hooks: 1.2.0
    PyQt6-commercial: 6.8.1
    PyQt6-Qt6: 6.8.2
    PyQt6-WebEngine-commercial: 6.8.0
    PyQt6-WebEngine-Qt6: 6.8.2
    PyQt6_sip: 13.10.0
    pytest: 8.3.5
    pytest-cov: 6.1.1
    python-dateutil: 2.9.0.post0
    pytz: 2025.2
    pywin32: 310
    pyzmq: 26.4.0
    qtconsole: 5.5.2
    QtPy: 2.4.3
    qtshim: 1.1
    RandomWords: 0.4.0
    requests: 2.32.3
    roman-numerals-py: 3.1.0
    scipy: 1.14.0
    setuptools: 78.1.0
    sfftk-rw: 0.8.1
    six: 1.16.0
    snowballstemmer: 3.0.1
    sortedcontainers: 2.4.0
    soupsieve: 2.7
    Sphinx: 8.2.3
    sphinx-autodoc-typehints: 3.1.0
    sphinxcontrib-applehelp: 2.0.0
    sphinxcontrib-blockdiag: 3.0.0
    sphinxcontrib-devhelp: 2.0.0
    sphinxcontrib-htmlhelp: 2.1.0
    sphinxcontrib-jsmath: 1.0.1
    sphinxcontrib-qthelp: 2.0.0
    sphinxcontrib-serializinghtml: 2.0.0
    stack-data: 0.6.3
    superqt: 0.7.1
    tables: 3.10.2
    tcia_utils: 1.5.1
    tifffile: 2025.3.13
    tinyarray: 1.2.4
    tornado: 6.5
    traitlets: 5.14.3
    typing_extensions: 4.13.2
    tzdata: 2025.2
    urllib3: 2.4.0
    wcwidth: 0.2.13
    webcolors: 24.11.1
    wheel: 0.45.1
    wheel-filename: 1.4.2
    widgetsnbextension: 4.0.14
    WMI: 1.5.1
File attachment: cluster1_1.pdb

cluster1_1.pdb

Attachments (1)

cluster1_1.pdb (437.6 KB ) - added by yjscxc2018@… 5 months ago.: Added by email2trac

Download all attachments as: .zip

Change History (3)

by yjscxc2018@…, 5 months ago

Attachment:	cluster1_1.pdb added

Added by email2trac

comment:1 by Eric Pettersen, 5 months ago

Component:	Unassigned → Core
Owner:	set to Eric Pettersen
Platform:	→ all
Project:	→ ChimeraX
Status:	new → accepted
Summary:	ChimeraX bug report submission → Crash in event loop

comment:2 by Eric Pettersen, 5 months ago

Status:	accepted → feedback

Hi,

I was able to open the file you attached on our Windows 10 box running ChimeraX 1.10 without any problem. Can you tell me what you were doing when the crash occurred?

--Eric

Eric Pettersen
UCSF Computer Graphics Lab

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