Opened 5 months ago
Closed 5 months ago
#18044 closed defect (can't reproduce)
KVFinder: some how cavity model is closed but still in table
| Reported by: | Owned by: | Eric Pettersen | |
|---|---|---|---|
| Priority: | normal | Milestone: | |
| Component: | Surface/Binding Analysis | Version: | |
| Keywords: | Cc: | ||
| Blocked By: | Blocking: | ||
| Notify when closed: | Platform: | all | |
| Project: | ChimeraX |
Description
The following bug report has been submitted:
Platform: Windows-10-10.0.19045
ChimeraX Version: 1.10rc202506130232 (2025-06-13 02:32:35 UTC)
Description
Replace this text with list of actions that caused this problem to occur
Log:
UCSF ChimeraX version: 1.10rc202506130232 (2025-06-13)
© 2016-2025 Regents of the University of California. All rights reserved.
How to cite UCSF ChimeraX
> open N:/野牡丹tannins/xo_co.mol2
Chain information for 1FIQ #1
---
Chain | Description
C1 | No description available
Opened xo_co.mol2 containing 1 structure (11497 atoms, 11627 bonds)
> show target ab
> hide cartoons
> ui tool show Log
> ui tool show "Model Panel"
> show atoms
> ui tool show "Show Sequence Viewer"
> sequence chain /C1
Alignment identifier is 1/C1
>
Incomplete command: modelcif
> models
Unknown command: models
> models list
Unknown command: models list
> list model
Unknown command: list model
> list modellist models
Unknown command: list modellist models
> show models
[Repeated 1 time(s)]
> ui tool show "Add Hydrogens"
> addh
Summary of feedback from adding hydrogens to 1FIQ #1
---
notes | No usable SEQRES records for 1FIQ (#1) chain C1; guessing termini instead
Chain-initial residues that are actual N termini: /C1 ASP 571
Chain-initial residues that are not actual N termini:
Chain-final residues that are actual C termini: /C1 THR 1315
Chain-final residues that are not actual C termini:
698 hydrogen bonds
7 hydrogens added
> hide #1 models
> show #1 models
> hide #1 models
> show #1 models
> select :1334
Nothing selected
> select :#C2/MOS
Expected an objects specifier or a keyword
> select #:C2/MOS
Expected an objects specifier or a keyword
> select #C2/MOS
Expected an objects specifier or a keyword
> select #C2MOS
Expected an objects specifier or a keyword
> select :#C2MOS
Expected an objects specifier or a keyword
> select :#/C2MOS
Expected an objects specifier or a keyword
> info structure #1
Expected a models specifier or a keyword
> info models
model id #1 type AtomicStructure name 1FIQ
> select #1:MOS
Nothing selected
> close session
> open N:/野牡丹tannins/xo_co.mol2
Chain information for 1FIQ #1.1
---
Chain | Description
C | No description available
Opened xo_co.mol2 containing 2 structures (11497 atoms, 11627 bonds)
> viewdockx #1.1-2
No suitable models found for ViewDockX
> color #1.2 #aaaa7fff
> color #1.2 #ff557fff
> hide #1.1 models
> show #1.1 models
> hide #!1 models
> show #!1 models
> hide #1.2 models
> show #1.2 models
> info structure #1
Expected a models specifier or a keyword
> info #1
3 models
#1, xo_co.mol2, shown
#1.1, 1FIQ, shown
11458 atoms, 11585 bonds, 745 residues, 1 chains (C)
#1.2, cofactors, shown
39 atoms, 42 bonds, 2 residues, 0 chains (1FIQ.C)
> info structure #1
Expected a models specifier or a keyword
> info structure #1.1
Expected a models specifier or a keyword
> info structure
Expected a models specifier or a keyword
> info models
model id #1 type Model name xo_co.mol2
model id #1.1 type AtomicStructure name 1FIQ
model id #1.2 type AtomicStructure name cofactors
> info models #1.1
model id #1.1 type AtomicStructure name 1FIQ
> info models #1
model id #1 type Model name xo_co.mol2
model id #1.1 type AtomicStructure name 1FIQ
model id #1.2 type AtomicStructure name cofactors
> hide #!1 models
> show #!1 models
> surface #1.2
> measure volume #1.2
Enclosed volume for cofactors_1FIQ.C SES surface (#1.2.1) = 358.9
> surface #1.1
> surface #1
> hide #!1 models
> show #!1 models
> delect surface #1
Unknown command: delect surface #1
> delect surface
Unknown command: delect surface
> move surface
Missing or invalid "axis" argument: Expected 3 floats or "x", or "y", or "z"
or two atoms
> close surface #1.1
Expected a models specifier or a keyword
> close surface #1
Expected a models specifier or a keyword
> surface delete #1
Expected an atoms specifier or a keyword
> close #1
> surface #1
No atoms specified by #1
> open N:\野牡丹tannins\xo_co.mol2 format mol2
Chain information for 1FIQ #1.1
---
Chain | Description
C | No description available
Opened xo_co.mol2 containing 2 structures (11497 atoms, 11627 bonds)
> viewdockx #1.1-2
No suitable models found for ViewDockX
> save "N:/野牡丹tannins/xo cofactor.cxs"
> ui tool show "Find Cavities"
No structures chosen
> ui tool show "Find Cavities"
> kvfinder #1.1 probeIn 1.2
73 cavities found for 1FIQ #1.1
1FIQ Cavities
---
ID | | Volume | Area | Points | Maximum
Depth | Average
Depth
1.1.1.14 | | 844.56 | 769.52 | 3910 | 12.88 | 4.94
1.1.1.65 | | 489.02 | 469.53 | 2264 | 6.29 | 2.27
1.1.1.25 | | 374.76 | 393.23 | 1735 | 15.3 | 6.24
1.1.1.44 | | 344.3 | 369.93 | 1594 | 9.62 | 4.45
1.1.1.32 | | 193.75 | 170.9 | 897 | 4.28 | 1.19
1.1.1.7 | | 147.74 | 131.66 | 684 | 4.57 | 1.8
1.1.1.34 | | 116.64 | 127.5 | 540 | 4.02 | 0.8
1.1.1.10 | | 103.46 | 149.04 | 479 | 9.67 | 5.19
1.1.1.19 | | 97.63 | 107.53 | 452 | 4.24 | 1.21
1.1.1.20 | | 97.63 | 112.7 | 452 | 7.64 | 3.5
1.1.1.12 | | 83.81 | 95.31 | 388 | 6 | 2.17
1.1.1.35 | | 69.55 | 75.97 | 322 | 3.23 | 1.37
1.1.1.2 | | 63.94 | 68.69 | 296 | 3.39 | 0.97
1.1.1.73 | | 54 | 76.22 | 250 | 0 | 0
1.1.1.68 | | 51.84 | 78.97 | 240 | 6.18 | 2.89
1.1.1.28 | | 45.58 | 64.01 | 211 | 4.07 | 1.45
1.1.1.47 | | 44.28 | 58 | 205 | 0 | 0
1.1.1.61 | | 43.42 | 62.28 | 201 | 0 | 0
1.1.1.31 | | 37.37 | 56.93 | 173 | 0 | 0
1.1.1.21 | | 36.5 | 54.85 | 169 | 0 | 0
1.1.1.45 | | 35.64 | 52.08 | 165 | 0 | 0
1.1.1.51 | | 31.1 | 39.17 | 144 | 1.34 | 0.44
1.1.1.53 | | 30.46 | 43.24 | 141 | 2.75 | 1.21
1.1.1.49 | | 29.59 | 48.64 | 137 | 0 | 0
1.1.1.72 | | 28.51 | 42.83 | 132 | 0 | 0
1.1.1.64 | | 27.86 | 42.11 | 129 | 0 | 0
1.1.1.59 | | 27.22 | 37.98 | 126 | 3.23 | 1.11
1.1.1.27 | | 26.35 | 36.05 | 122 | 1.8 | 0.47
1.1.1.63 | | 24.84 | 37.3 | 115 | 0 | 0
1.1.1.33 | | 22.9 | 33.07 | 106 | 1.34 | 0.42
1.1.1.24 | | 21.82 | 34.69 | 101 | 0 | 0
1.1.1.52 | | 20.3 | 30.78 | 94 | 1.34 | 0.37
1.1.1.41 | | 18.58 | 26.19 | 86 | 1.34 | 0.48
1.1.1.50 | | 18.14 | 31.76 | 84 | 0 | 0
1.1.1.3 | | 15.34 | 29.76 | 71 | 3.84 | 1.91
1.1.1.16 | | 14.9 | 25.65 | 69 | 0 | 0
1.1.1.56 | | 14.04 | 23.52 | 65 | 0.6 | 0.08
1.1.1.5 | | 13.82 | 24.2 | 64 | 0.85 | 0.22
1.1.1.46 | | 13.61 | 21.46 | 63 | 1.99 | 0.67
1.1.1.62 | | 13.61 | 23.54 | 63 | 0 | 0
1.1.1.11 | | 12.96 | 23.06 | 60 | 0 | 0
1.1.1.4 | | 12.31 | 23.27 | 57 | 0 | 0
1.1.1.42 | | 11.88 | 18.39 | 55 | 1.34 | 0.41
1.1.1.43 | | 10.37 | 19.38 | 48 | 0 | 0
1.1.1.67 | | 10.37 | 19.38 | 48 | 0 | 0
1.1.1.22 | | 9.5 | 18.16 | 44 | 2.47 | 1.28
1.1.1.57 | | 9.29 | 12.6 | 43 | 0.85 | 0.31
1.1.1.6 | | 9.07 | 17.48 | 42 | 0 | 0
1.1.1.70 | | 8.64 | 14.87 | 40 | 1.47 | 0.54
1.1.1.8 | | 7.99 | 15.69 | 37 | 0.85 | 0.21
1.1.1.48 | | 7.99 | 13.33 | 37 | 0.6 | 0.29
1.1.1.1 | | 7.78 | 15.52 | 36 | 0 | 0
1.1.1.23 | | 7.78 | 15.52 | 36 | 0 | 0
1.1.1.36 | | 7.78 | 15.52 | 36 | 0 | 0
1.1.1.54 | | 7.78 | 15.52 | 36 | 0 | 0
1.1.1.55 | | 7.78 | 15.52 | 36 | 0 | 0
1.1.1.9 | | 7.13 | 13.92 | 33 | 1.8 | 0.68
1.1.1.66 | | 6.26 | 10.85 | 29 | 0.6 | 0.21
1.1.1.13 | | 5.83 | 12.3 | 27 | 0 | 0
1.1.1.15 | | 5.83 | 12.3 | 27 | 0 | 0
1.1.1.18 | | 5.83 | 12.3 | 27 | 0 | 0
1.1.1.26 | | 5.83 | 12.3 | 27 | 0 | 0
1.1.1.29 | | 5.83 | 12.3 | 27 | 0 | 0
1.1.1.30 | | 5.83 | 12.3 | 27 | 0 | 0
1.1.1.37 | | 5.83 | 12.3 | 27 | 0 | 0
1.1.1.38 | | 5.83 | 12.3 | 27 | 0 | 0
1.1.1.39 | | 5.83 | 12.3 | 27 | 0 | 0
1.1.1.40 | | 5.83 | 12.3 | 27 | 0 | 0
1.1.1.58 | | 5.83 | 12.3 | 27 | 0 | 0
1.1.1.60 | | 5.83 | 12.3 | 27 | 0 | 0
1.1.1.71 | | 5.83 | 12.3 | 27 | 0 | 0
1.1.1.17 | | 5.62 | 10.92 | 26 | 0.85 | 0.27
1.1.1.69 | | 5.4 | 10.12 | 25 | 0.85 | 0.29
> view #1.1.1.14 @< 3.5
> zoom 0.75
moved plane near -32.43723664074785 [-0. -0. -1.]
moved plane far -32.43723664074785 [-0. -0. -1.]
> surface #1.1.1.1-73 probeRadius 1.2 transparency 50
> ~surface #1.1.1
> surface #1.1.1.14 probeRadius 1.2
> select #!1.1 & (#1.1.1.14 @< 3.5)
591 atoms, 523 bonds, 76 residues, 1 model selected
> select #1.1.1.14
3910 atoms, 1 residue, 1 model selected
> show
> #!1.1/C:648-649,767-768,770-771,796-799,802-803,872-873,875-876,880,910-914,1005-1011,1013-1014,1016-1018,1034,1038,1040-1042,1045,1071-1084,1086,1132,1182,1185-1186,1190-1191,1194,1256-1261
> hide surfaces #1.1
Expected ',' or a keyword
> hide surfaces #1.1.1
Expected ',' or a keyword
> hide #1.1.1
> view #!1.1.1.65 @< 3.5
> zoom 0.75
moved plane near -35.283269773228504 [-0.43798745 -0.51093891 -0.73966778]
moved plane far -35.283269773228504 [-0.43798745 -0.51093891 -0.73966778]
> ~surface #1.1.1
> surface #!1.1.1.65 probeRadius 1.2
> select #!1.1 & (#!1.1.1.65 @< 3.5)
371 atoms, 332 bonds, 43 residues, 1 model selected
> select #!1.1.1.65
2264 atoms, 1 residue, 1 model selected
> show
> #!1.1/C:927-929,931-932,936,938-939,941-942,968,977,981,984-985,988,996-1000,1272,1275-1277,1279,1282-1283,1286-1294
> view #!1.1.1.14 @< 3.5
> zoom 0.75
moved plane near -44.099673730161804 [-0.43798745 -0.51093891 -0.73966778]
moved plane far -44.099673730161804 [-0.43798745 -0.51093891 -0.73966778]
> ~surface #1.1.1
> surface #!1.1.1.14 probeRadius 1.2
> select #!1.1 & (#!1.1.1.14 @< 3.5)
591 atoms, 523 bonds, 76 residues, 1 model selected
> select #!1.1.1.14
3910 atoms, 1 residue, 1 model selected
> show
> #!1.1/C:648-649,767-768,770-771,796-799,802-803,872-873,875-876,880,910-914,1005-1011,1013-1014,1016-1018,1034,1038,1040-1042,1045,1071-1084,1086,1132,1182,1185-1186,1190-1191,1194,1256-1261
> color #1.1.1.14 #f6f8667f
> color #1.1.1.14 #f2f8797f
> color #1.1.1.14 #eff88e7f
> color #1.1.1.14 #f0f89c7f
> color #1.1.1.14 #f1f8a47f
> color #1.1.1.14 #55aa7f7f
> color #1.1.1.14 #55ff7f7f
> color #1.1.1.14 #ffff007f
> color #1.1.1.14 #aaffff7f
> select #1.1.14
Nothing selected
> select #1.1.1.14
3910 atoms, 1 residue, 1 model selected
> measure volume sel
Enclosed volume for cavity 14_cavity SES surface (#1.1.1.14.1) = 921.3
> save N:/野牡丹tannins/XOcofactor1.cxs
> close session
> open "N:/野牡丹tannins/XO_Tellimagrandin II_18/XO_18tell.mol2"
Chain information for 1FIQ_C #1.1
---
Chain | Description
1FIQ.C | No description available
Opened XO_18tell.mol2 containing 4 structures (11761 atoms, 11729 bonds)
> viewdockx #1.1-4
No suitable models found for ViewDockX
> hide #1.3 models
> show #1.3 models
> hide #1.3 models
> hide #1.2 models
> show #1.2 models
> hide #1.2 models
> show #1.2 models
> hide #1.1 models
> show #1.1 models
> hide #!1 models
> show #!1 models
> hide #1.2 models
> show #1.2 models
> hide #1.4 models
> show #1.4 models
> hide #1.1 models
> show #1.1 models
> hide #!1 models
> show #!1 models
> ui tool show "Find Cavities"
> kvfinder #1.1 probeIn 1.2
72 cavities found for 1FIQ_C #1.1
1FIQ_C Cavities
---
ID | | Volume | Area | Points | Maximum
Depth | Average
Depth
1.1.1.14 | | 871.99 | 780.89 | 4037 | 12.88 | 4.97
1.1.1.64 | | 489.02 | 469.53 | 2264 | 6.29 | 2.27
1.1.1.24 | | 374.76 | 393.23 | 1735 | 15.3 | 6.24
1.1.1.43 | | 344.3 | 369.93 | 1594 | 9.62 | 4.45
1.1.1.31 | | 193.75 | 170.9 | 897 | 4.28 | 1.19
1.1.1.7 | | 147.74 | 131.66 | 684 | 4.57 | 1.8
1.1.1.33 | | 116.64 | 127.5 | 540 | 4.02 | 0.8
1.1.1.15 | | 108 | 127.5 | 500 | 4.24 | 1.25
1.1.1.10 | | 103.46 | 149.04 | 479 | 9.67 | 5.19
1.1.1.19 | | 97.63 | 112.7 | 452 | 7.64 | 3.5
1.1.1.12 | | 83.81 | 95.31 | 388 | 6 | 2.17
1.1.1.34 | | 69.55 | 75.97 | 322 | 3.23 | 1.37
1.1.1.2 | | 63.94 | 68.69 | 296 | 3.39 | 0.97
1.1.1.72 | | 54 | 76.22 | 250 | 0 | 0
1.1.1.67 | | 51.84 | 78.97 | 240 | 6.18 | 2.89
1.1.1.27 | | 45.58 | 64.01 | 211 | 4.07 | 1.45
1.1.1.60 | | 43.42 | 62.28 | 201 | 0 | 0
1.1.1.46 | | 38.88 | 53.52 | 180 | 0 | 0
1.1.1.44 | | 37.58 | 54.68 | 174 | 0 | 0
1.1.1.30 | | 37.37 | 56.93 | 173 | 0 | 0
1.1.1.20 | | 36.5 | 54.85 | 169 | 0 | 0
1.1.1.50 | | 31.1 | 39.17 | 144 | 1.34 | 0.44
1.1.1.52 | | 30.46 | 43.24 | 141 | 2.75 | 1.21
1.1.1.48 | | 29.59 | 48.64 | 137 | 0 | 0
1.1.1.71 | | 28.51 | 42.83 | 132 | 0 | 0
1.1.1.63 | | 27.86 | 42.11 | 129 | 0 | 0
1.1.1.58 | | 27.22 | 37.98 | 126 | 3.23 | 1.11
1.1.1.26 | | 26.35 | 36.05 | 122 | 1.8 | 0.47
1.1.1.62 | | 24.84 | 37.3 | 115 | 0 | 0
1.1.1.32 | | 22.9 | 33.07 | 106 | 1.34 | 0.42
1.1.1.23 | | 21.82 | 34.69 | 101 | 0 | 0
1.1.1.51 | | 20.3 | 30.78 | 94 | 1.34 | 0.37
1.1.1.40 | | 18.58 | 26.19 | 86 | 1.34 | 0.48
1.1.1.49 | | 18.14 | 31.76 | 84 | 0 | 0
1.1.1.3 | | 15.34 | 29.76 | 71 | 3.84 | 1.91
1.1.1.16 | | 14.9 | 25.65 | 69 | 0 | 0
1.1.1.55 | | 14.04 | 23.52 | 65 | 0.6 | 0.08
1.1.1.5 | | 13.82 | 24.2 | 64 | 0.85 | 0.22
1.1.1.45 | | 13.61 | 21.46 | 63 | 1.99 | 0.67
1.1.1.61 | | 13.61 | 23.54 | 63 | 0 | 0
1.1.1.11 | | 12.96 | 23.06 | 60 | 0 | 0
1.1.1.4 | | 12.31 | 23.27 | 57 | 0 | 0
1.1.1.41 | | 11.88 | 18.39 | 55 | 1.34 | 0.41
1.1.1.42 | | 10.37 | 19.38 | 48 | 0 | 0
1.1.1.66 | | 10.37 | 19.38 | 48 | 0 | 0
1.1.1.21 | | 9.5 | 18.16 | 44 | 2.47 | 1.28
1.1.1.56 | | 9.29 | 12.6 | 43 | 0.85 | 0.31
1.1.1.6 | | 9.07 | 17.48 | 42 | 0 | 0
1.1.1.69 | | 8.64 | 14.87 | 40 | 1.47 | 0.54
1.1.1.8 | | 7.99 | 15.69 | 37 | 0.85 | 0.21
1.1.1.47 | | 7.99 | 13.33 | 37 | 0.6 | 0.29
1.1.1.1 | | 7.78 | 15.52 | 36 | 0 | 0
1.1.1.22 | | 7.78 | 15.52 | 36 | 0 | 0
1.1.1.35 | | 7.78 | 15.52 | 36 | 0 | 0
1.1.1.53 | | 7.78 | 15.52 | 36 | 0 | 0
1.1.1.54 | | 7.78 | 15.52 | 36 | 0 | 0
1.1.1.9 | | 7.13 | 13.92 | 33 | 1.8 | 0.68
1.1.1.17 | | 7.13 | 13.26 | 33 | 1.04 | 0.34
1.1.1.65 | | 6.26 | 10.85 | 29 | 0.6 | 0.21
1.1.1.13 | | 5.83 | 12.3 | 27 | 0 | 0
1.1.1.18 | | 5.83 | 12.3 | 27 | 0 | 0
1.1.1.25 | | 5.83 | 12.3 | 27 | 0 | 0
1.1.1.28 | | 5.83 | 12.3 | 27 | 0 | 0
1.1.1.29 | | 5.83 | 12.3 | 27 | 0 | 0
1.1.1.36 | | 5.83 | 12.3 | 27 | 0 | 0
1.1.1.37 | | 5.83 | 12.3 | 27 | 0 | 0
1.1.1.38 | | 5.83 | 12.3 | 27 | 0 | 0
1.1.1.39 | | 5.83 | 12.3 | 27 | 0 | 0
1.1.1.57 | | 5.83 | 12.3 | 27 | 0 | 0
1.1.1.59 | | 5.83 | 12.3 | 27 | 0 | 0
1.1.1.70 | | 5.83 | 12.3 | 27 | 0 | 0
1.1.1.68 | | 5.4 | 10.12 | 25 | 0.85 | 0.29
> hide cavities
Expected a collection of one of 'atoms', 'bonds', 'cartoons', 'models',
'pbonds', 'pseudobonds', 'ribbons', or 'surfaces' or a keyword
> show #1.3 models
> hide #1.3 models
> show #1.3 models
> hide #1.3 models
> show #1.3 models
> hide #1.3 models
Traceback (most recent call last):
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 34, in data
val = col.display_value(item)
^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 886, in display_value
val = self.value(instance)
^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 903, in value
return self.data_fetch(instance)
^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\kvfinder\tool.py", line 201, in color_func
if s.display and s.atoms.displays.any():
^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\atomic\structure.py", line 529, in _get_display
return Model.display.fget(self)
^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
TypeError: object of type 'NoneType' has no len()
TypeError: object of type 'NoneType' has no len()
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
See log for complete Python traceback.
Traceback (most recent call last):
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 34, in data
val = col.display_value(item)
^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 886, in display_value
val = self.value(instance)
^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 903, in value
return self.data_fetch(instance)
^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\kvfinder\tool.py", line 201, in color_func
if s.display and s.atoms.displays.any():
^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\atomic\structure.py", line 529, in _get_display
return Model.display.fget(self)
^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
TypeError: object of type 'NoneType' has no len()
TypeError: object of type 'NoneType' has no len()
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
See log for complete Python traceback.
Traceback (most recent call last):
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 34, in data
val = col.display_value(item)
^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 886, in display_value
val = self.value(instance)
^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 903, in value
return self.data_fetch(instance)
^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\kvfinder\tool.py", line 201, in color_func
if s.display and s.atoms.displays.any():
^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\atomic\structure.py", line 529, in _get_display
return Model.display.fget(self)
^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
TypeError: object of type 'NoneType' has no len()
TypeError: object of type 'NoneType' has no len()
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
See log for complete Python traceback.
Traceback (most recent call last):
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 34, in data
val = col.display_value(item)
^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 886, in display_value
val = self.value(instance)
^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 903, in value
return self.data_fetch(instance)
^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\kvfinder\tool.py", line 201, in color_func
if s.display and s.atoms.displays.any():
^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\atomic\structure.py", line 529, in _get_display
return Model.display.fget(self)
^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
TypeError: object of type 'NoneType' has no len()
TypeError: object of type 'NoneType' has no len()
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
See log for complete Python traceback.
Traceback (most recent call last):
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 34, in data
val = col.display_value(item)
^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 886, in display_value
val = self.value(instance)
^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 903, in value
return self.data_fetch(instance)
^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\kvfinder\tool.py", line 201, in color_func
if s.display and s.atoms.displays.any():
^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\atomic\structure.py", line 529, in _get_display
return Model.display.fget(self)
^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
TypeError: object of type 'NoneType' has no len()
TypeError: object of type 'NoneType' has no len()
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
See log for complete Python traceback.
Traceback (most recent call last):
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 34, in data
val = col.display_value(item)
^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 886, in display_value
val = self.value(instance)
^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 903, in value
return self.data_fetch(instance)
^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\kvfinder\tool.py", line 201, in color_func
if s.display and s.atoms.displays.any():
^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\atomic\structure.py", line 529, in _get_display
return Model.display.fget(self)
^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
TypeError: object of type 'NoneType' has no len()
TypeError: object of type 'NoneType' has no len()
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
See log for complete Python traceback.
Traceback (most recent call last):
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 34, in data
val = col.display_value(item)
^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 886, in display_value
val = self.value(instance)
^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 903, in value
return self.data_fetch(instance)
^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\kvfinder\tool.py", line 201, in color_func
if s.display and s.atoms.displays.any():
^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\atomic\structure.py", line 529, in _get_display
return Model.display.fget(self)
^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
TypeError: object of type 'NoneType' has no len()
TypeError: object of type 'NoneType' has no len()
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
See log for complete Python traceback.
Traceback (most recent call last):
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 34, in data
val = col.display_value(item)
^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 886, in display_value
val = self.value(instance)
^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 903, in value
return self.data_fetch(instance)
^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\kvfinder\tool.py", line 201, in color_func
if s.display and s.atoms.displays.any():
^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\atomic\structure.py", line 529, in _get_display
return Model.display.fget(self)
^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
TypeError: object of type 'NoneType' has no len()
TypeError: object of type 'NoneType' has no len()
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
See log for complete Python traceback.
Traceback (most recent call last):
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 34, in data
val = col.display_value(item)
^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 886, in display_value
val = self.value(instance)
^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 903, in value
return self.data_fetch(instance)
^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\kvfinder\tool.py", line 201, in color_func
if s.display and s.atoms.displays.any():
^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\atomic\structure.py", line 529, in _get_display
return Model.display.fget(self)
^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
TypeError: object of type 'NoneType' has no len()
TypeError: object of type 'NoneType' has no len()
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
See log for complete Python traceback.
Traceback (most recent call last):
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 34, in data
val = col.display_value(item)
^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 886, in display_value
val = self.value(instance)
^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 903, in value
return self.data_fetch(instance)
^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\kvfinder\tool.py", line 201, in color_func
if s.display and s.atoms.displays.any():
^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\atomic\structure.py", line 529, in _get_display
return Model.display.fget(self)
^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
TypeError: object of type 'NoneType' has no len()
TypeError: object of type 'NoneType' has no len()
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
See log for complete Python traceback.
Traceback (most recent call last):
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 34, in data
val = col.display_value(item)
^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 886, in display_value
val = self.value(instance)
^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 903, in value
return self.data_fetch(instance)
^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\kvfinder\tool.py", line 201, in color_func
if s.display and s.atoms.displays.any():
^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\atomic\structure.py", line 529, in _get_display
return Model.display.fget(self)
^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
TypeError: object of type 'NoneType' has no len()
TypeError: object of type 'NoneType' has no len()
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
See log for complete Python traceback.
Traceback (most recent call last):
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 34, in data
val = col.display_value(item)
^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 886, in display_value
val = self.value(instance)
^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 903, in value
return self.data_fetch(instance)
^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\kvfinder\tool.py", line 201, in color_func
if s.display and s.atoms.displays.any():
^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\atomic\structure.py", line 529, in _get_display
return Model.display.fget(self)
^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
TypeError: object of type 'NoneType' has no len()
TypeError: object of type 'NoneType' has no len()
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
See log for complete Python traceback.
Traceback (most recent call last):
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 34, in data
val = col.display_value(item)
^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 886, in display_value
val = self.value(instance)
^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 903, in value
return self.data_fetch(instance)
^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\kvfinder\tool.py", line 201, in color_func
if s.display and s.atoms.displays.any():
^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\atomic\structure.py", line 529, in _get_display
return Model.display.fget(self)
^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
TypeError: object of type 'NoneType' has no len()
TypeError: object of type 'NoneType' has no len()
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
See log for complete Python traceback.
Traceback (most recent call last):
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 34, in data
val = col.display_value(item)
^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 886, in display_value
val = self.value(instance)
^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 903, in value
return self.data_fetch(instance)
^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\kvfinder\tool.py", line 201, in color_func
if s.display and s.atoms.displays.any():
^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\atomic\structure.py", line 529, in _get_display
return Model.display.fget(self)
^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
TypeError: object of type 'NoneType' has no len()
TypeError: object of type 'NoneType' has no len()
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
See log for complete Python traceback.
Traceback (most recent call last):
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 34, in data
val = col.display_value(item)
^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 886, in display_value
val = self.value(instance)
^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 903, in value
return self.data_fetch(instance)
^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\kvfinder\tool.py", line 201, in color_func
if s.display and s.atoms.displays.any():
^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\atomic\structure.py", line 529, in _get_display
return Model.display.fget(self)
^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
TypeError: object of type 'NoneType' has no len()
TypeError: object of type 'NoneType' has no len()
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
See log for complete Python traceback.
Traceback (most recent call last):
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 34, in data
val = col.display_value(item)
^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 886, in display_value
val = self.value(instance)
^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 903, in value
return self.data_fetch(instance)
^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\kvfinder\tool.py", line 201, in color_func
if s.display and s.atoms.displays.any():
^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\atomic\structure.py", line 529, in _get_display
return Model.display.fget(self)
^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
TypeError: object of type 'NoneType' has no len()
TypeError: object of type 'NoneType' has no len()
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
See log for complete Python traceback.
Traceback (most recent call last):
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 34, in data
val = col.display_value(item)
^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 886, in display_value
val = self.value(instance)
^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 903, in value
return self.data_fetch(instance)
^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\kvfinder\tool.py", line 201, in color_func
if s.display and s.atoms.displays.any():
^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\atomic\structure.py", line 529, in _get_display
return Model.display.fget(self)
^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
TypeError: object of type 'NoneType' has no len()
TypeError: object of type 'NoneType' has no len()
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
See log for complete Python traceback.
Traceback (most recent call last):
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 34, in data
val = col.display_value(item)
^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 886, in display_value
val = self.value(instance)
^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 903, in value
return self.data_fetch(instance)
^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\kvfinder\tool.py", line 201, in color_func
if s.display and s.atoms.displays.any():
^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\atomic\structure.py", line 529, in _get_display
return Model.display.fget(self)
^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
TypeError: object of type 'NoneType' has no len()
TypeError: object of type 'NoneType' has no len()
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
See log for complete Python traceback.
Traceback (most recent call last):
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 34, in data
val = col.display_value(item)
^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 886, in display_value
val = self.value(instance)
^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 903, in value
return self.data_fetch(instance)
^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\kvfinder\tool.py", line 201, in color_func
if s.display and s.atoms.displays.any():
^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\atomic\structure.py", line 529, in _get_display
return Model.display.fget(self)
^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
TypeError: object of type 'NoneType' has no len()
TypeError: object of type 'NoneType' has no len()
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
See log for complete Python traceback.
Traceback (most recent call last):
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 34, in data
val = col.display_value(item)
^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 886, in display_value
val = self.value(instance)
^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 903, in value
return self.data_fetch(instance)
^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\kvfinder\tool.py", line 201, in color_func
if s.display and s.atoms.displays.any():
^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\atomic\structure.py", line 529, in _get_display
return Model.display.fget(self)
^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
TypeError: object of type 'NoneType' has no len()
TypeError: object of type 'NoneType' has no len()
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
See log for complete Python traceback.
Traceback (most recent call last):
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 34, in data
val = col.display_value(item)
^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 886, in display_value
val = self.value(instance)
^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 903, in value
return self.data_fetch(instance)
^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\kvfinder\tool.py", line 201, in color_func
if s.display and s.atoms.displays.any():
^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\atomic\structure.py", line 529, in _get_display
return Model.display.fget(self)
^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
TypeError: object of type 'NoneType' has no len()
TypeError: object of type 'NoneType' has no len()
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
See log for complete Python traceback.
Traceback (most recent call last):
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 34, in data
val = col.display_value(item)
^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 886, in display_value
val = self.value(instance)
^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 903, in value
return self.data_fetch(instance)
^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\kvfinder\tool.py", line 201, in color_func
if s.display and s.atoms.displays.any():
^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\atomic\structure.py", line 529, in _get_display
return Model.display.fget(self)
^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
TypeError: object of type 'NoneType' has no len()
TypeError: object of type 'NoneType' has no len()
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
See log for complete Python traceback.
Traceback (most recent call last):
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 34, in data
val = col.display_value(item)
^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 886, in display_value
val = self.value(instance)
^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 903, in value
return self.data_fetch(instance)
^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\kvfinder\tool.py", line 201, in color_func
if s.display and s.atoms.displays.any():
^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\atomic\structure.py", line 529, in _get_display
return Model.display.fget(self)
^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
TypeError: object of type 'NoneType' has no len()
TypeError: object of type 'NoneType' has no len()
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
See log for complete Python traceback.
Traceback (most recent call last):
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 34, in data
val = col.display_value(item)
^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 886, in display_value
val = self.value(instance)
^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 903, in value
return self.data_fetch(instance)
^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\kvfinder\tool.py", line 201, in color_func
if s.display and s.atoms.displays.any():
^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\atomic\structure.py", line 529, in _get_display
return Model.display.fget(self)
^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
TypeError: object of type 'NoneType' has no len()
TypeError: object of type 'NoneType' has no len()
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
See log for complete Python traceback.
Traceback (most recent call last):
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 34, in data
val = col.display_value(item)
^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 886, in display_value
val = self.value(instance)
^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 903, in value
return self.data_fetch(instance)
^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\kvfinder\tool.py", line 201, in color_func
if s.display and s.atoms.displays.any():
^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\atomic\structure.py", line 529, in _get_display
return Model.display.fget(self)
^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
TypeError: object of type 'NoneType' has no len()
TypeError: object of type 'NoneType' has no len()
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
See log for complete Python traceback.
Traceback (most recent call last):
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 34, in data
val = col.display_value(item)
^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 886, in display_value
val = self.value(instance)
^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 903, in value
return self.data_fetch(instance)
^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\kvfinder\tool.py", line 201, in color_func
if s.display and s.atoms.displays.any():
^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\atomic\structure.py", line 529, in _get_display
return Model.display.fget(self)
^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
TypeError: object of type 'NoneType' has no len()
TypeError: object of type 'NoneType' has no len()
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
See log for complete Python traceback.
Traceback (most recent call last):
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 34, in data
val = col.display_value(item)
^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 886, in display_value
val = self.value(instance)
^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 903, in value
return self.data_fetch(instance)
^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\kvfinder\tool.py", line 201, in color_func
if s.display and s.atoms.displays.any():
^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\atomic\structure.py", line 529, in _get_display
return Model.display.fget(self)
^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
TypeError: object of type 'NoneType' has no len()
TypeError: object of type 'NoneType' has no len()
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
See log for complete Python traceback.
Traceback (most recent call last):
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 34, in data
val = col.display_value(item)
^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 886, in display_value
val = self.value(instance)
^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 903, in value
return self.data_fetch(instance)
^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\kvfinder\tool.py", line 201, in color_func
if s.display and s.atoms.displays.any():
^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\atomic\structure.py", line 529, in _get_display
return Model.display.fget(self)
^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
TypeError: object of type 'NoneType' has no len()
TypeError: object of type 'NoneType' has no len()
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
See log for complete Python traceback.
Traceback (most recent call last):
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 34, in data
val = col.display_value(item)
^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 886, in display_value
val = self.value(instance)
^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 903, in value
return self.data_fetch(instance)
^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\kvfinder\tool.py", line 201, in color_func
if s.display and s.atoms.displays.any():
^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\atomic\structure.py", line 529, in _get_display
return Model.display.fget(self)
^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
TypeError: object of type 'NoneType' has no len()
TypeError: object of type 'NoneType' has no len()
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
See log for complete Python traceback.
Traceback (most recent call last):
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 34, in data
val = col.display_value(item)
^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 886, in display_value
val = self.value(instance)
^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 903, in value
return self.data_fetch(instance)
^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\kvfinder\tool.py", line 201, in color_func
if s.display and s.atoms.displays.any():
^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\atomic\structure.py", line 529, in _get_display
return Model.display.fget(self)
^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
TypeError: object of type 'NoneType' has no len()
TypeError: object of type 'NoneType' has no len()
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
See log for complete Python traceback.
Traceback (most recent call last):
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 34, in data
val = col.display_value(item)
^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 886, in display_value
val = self.value(instance)
^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 903, in value
return self.data_fetch(instance)
^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\kvfinder\tool.py", line 201, in color_func
if s.display and s.atoms.displays.any():
^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\atomic\structure.py", line 529, in _get_display
return Model.display.fget(self)
^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
TypeError: object of type 'NoneType' has no len()
TypeError: object of type 'NoneType' has no len()
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
See log for complete Python traceback.
Traceback (most recent call last):
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 34, in data
val = col.display_value(item)
^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 886, in display_value
val = self.value(instance)
^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 903, in value
return self.data_fetch(instance)
^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\kvfinder\tool.py", line 201, in color_func
if s.display and s.atoms.displays.any():
^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\atomic\structure.py", line 529, in _get_display
return Model.display.fget(self)
^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
TypeError: object of type 'NoneType' has no len()
TypeError: object of type 'NoneType' has no len()
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
See log for complete Python traceback.
Traceback (most recent call last):
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 34, in data
val = col.display_value(item)
^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 886, in display_value
val = self.value(instance)
^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 903, in value
return self.data_fetch(instance)
^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\kvfinder\tool.py", line 201, in color_func
if s.display and s.atoms.displays.any():
^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\atomic\structure.py", line 529, in _get_display
return Model.display.fget(self)
^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
TypeError: object of type 'NoneType' has no len()
TypeError: object of type 'NoneType' has no len()
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
See log for complete Python traceback.
Traceback (most recent call last):
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 34, in data
val = col.display_value(item)
^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 886, in display_value
val = self.value(instance)
^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 903, in value
return self.data_fetch(instance)
^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\kvfinder\tool.py", line 201, in color_func
if s.display and s.atoms.displays.any():
^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\atomic\structure.py", line 529, in _get_display
return Model.display.fget(self)
^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
TypeError: object of type 'NoneType' has no len()
TypeError: object of type 'NoneType' has no len()
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
See log for complete Python traceback.
Traceback (most recent call last):
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 34, in data
val = col.display_value(item)
^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 886, in display_value
val = self.value(instance)
^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 903, in value
return self.data_fetch(instance)
^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\kvfinder\tool.py", line 201, in color_func
if s.display and s.atoms.displays.any():
^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\atomic\structure.py", line 529, in _get_display
return Model.display.fget(self)
^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
TypeError: object of type 'NoneType' has no len()
TypeError: object of type 'NoneType' has no len()
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
See log for complete Python traceback.
Traceback (most recent call last):
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 34, in data
val = col.display_value(item)
^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 886, in display_value
val = self.value(instance)
^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 903, in value
return self.data_fetch(instance)
^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\kvfinder\tool.py", line 201, in color_func
if s.display and s.atoms.displays.any():
^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\atomic\structure.py", line 529, in _get_display
return Model.display.fget(self)
^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
TypeError: object of type 'NoneType' has no len()
TypeError: object of type 'NoneType' has no len()
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
See log for complete Python traceback.
Traceback (most recent call last):
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 34, in data
val = col.display_value(item)
^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 886, in display_value
val = self.value(instance)
^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 903, in value
return self.data_fetch(instance)
^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\kvfinder\tool.py", line 201, in color_func
if s.display and s.atoms.displays.any():
^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\atomic\structure.py", line 529, in _get_display
return Model.display.fget(self)
^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
TypeError: object of type 'NoneType' has no len()
TypeError: object of type 'NoneType' has no len()
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
See log for complete Python traceback.
Traceback (most recent call last):
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 34, in data
val = col.display_value(item)
^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 886, in display_value
val = self.value(instance)
^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 903, in value
return self.data_fetch(instance)
^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\kvfinder\tool.py", line 201, in color_func
if s.display and s.atoms.displays.any():
^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\atomic\structure.py", line 529, in _get_display
return Model.display.fget(self)
^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
TypeError: object of type 'NoneType' has no len()
TypeError: object of type 'NoneType' has no len()
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
See log for complete Python traceback.
Traceback (most recent call last):
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 34, in data
val = col.display_value(item)
^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 886, in display_value
val = self.value(instance)
^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 903, in value
return self.data_fetch(instance)
^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\kvfinder\tool.py", line 201, in color_func
if s.display and s.atoms.displays.any():
^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\atomic\structure.py", line 529, in _get_display
return Model.display.fget(self)
^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
TypeError: object of type 'NoneType' has no len()
TypeError: object of type 'NoneType' has no len()
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
See log for complete Python traceback.
Traceback (most recent call last):
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 34, in data
val = col.display_value(item)
^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 886, in display_value
val = self.value(instance)
^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 903, in value
return self.data_fetch(instance)
^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\kvfinder\tool.py", line 201, in color_func
if s.display and s.atoms.displays.any():
^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\atomic\structure.py", line 529, in _get_display
return Model.display.fget(self)
^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
TypeError: object of type 'NoneType' has no len()
TypeError: object of type 'NoneType' has no len()
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
See log for complete Python traceback.
Traceback (most recent call last):
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 34, in data
val = col.display_value(item)
^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 886, in display_value
val = self.value(instance)
^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 903, in value
return self.data_fetch(instance)
^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\kvfinder\tool.py", line 201, in color_func
if s.display and s.atoms.displays.any():
^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\atomic\structure.py", line 529, in _get_display
return Model.display.fget(self)
^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
TypeError: object of type 'NoneType' has no len()
TypeError: object of type 'NoneType' has no len()
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
See log for complete Python traceback.
Traceback (most recent call last):
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 34, in data
val = col.display_value(item)
^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 886, in display_value
val = self.value(instance)
^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 903, in value
return self.data_fetch(instance)
^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\kvfinder\tool.py", line 201, in color_func
if s.display and s.atoms.displays.any():
^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\atomic\structure.py", line 529, in _get_display
return Model.display.fget(self)
^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
TypeError: object of type 'NoneType' has no len()
TypeError: object of type 'NoneType' has no len()
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
See log for complete Python traceback.
Traceback (most recent call last):
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 34, in data
val = col.display_value(item)
^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 886, in display_value
val = self.value(instance)
^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 903, in value
return self.data_fetch(instance)
^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\kvfinder\tool.py", line 201, in color_func
if s.display and s.atoms.displays.any():
^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\atomic\structure.py", line 529, in _get_display
return Model.display.fget(self)
^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
TypeError: object of type 'NoneType' has no len()
TypeError: object of type 'NoneType' has no len()
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
See log for complete Python traceback.
Traceback (most recent call last):
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 34, in data
val = col.display_value(item)
^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 886, in display_value
val = self.value(instance)
^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 903, in value
return self.data_fetch(instance)
^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\kvfinder\tool.py", line 201, in color_func
if s.display and s.atoms.displays.any():
^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\atomic\structure.py", line 529, in _get_display
return Model.display.fget(self)
^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
TypeError: object of type 'NoneType' has no len()
TypeError: object of type 'NoneType' has no len()
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
See log for complete Python traceback.
Traceback (most recent call last):
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 34, in data
val = col.display_value(item)
^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 886, in display_value
val = self.value(instance)
^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 903, in value
return self.data_fetch(instance)
^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\kvfinder\tool.py", line 201, in color_func
if s.display and s.atoms.displays.any():
^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\atomic\structure.py", line 529, in _get_display
return Model.display.fget(self)
^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
TypeError: object of type 'NoneType' has no len()
TypeError: object of type 'NoneType' has no len()
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
See log for complete Python traceback.
Traceback (most recent call last):
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 34, in data
val = col.display_value(item)
^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 886, in display_value
val = self.value(instance)
^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 903, in value
return self.data_fetch(instance)
^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\kvfinder\tool.py", line 201, in color_func
if s.display and s.atoms.displays.any():
^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\atomic\structure.py", line 529, in _get_display
return Model.display.fget(self)
^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
TypeError: object of type 'NoneType' has no len()
TypeError: object of type 'NoneType' has no len()
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
See log for complete Python traceback.
Traceback (most recent call last):
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 34, in data
val = col.display_value(item)
^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 886, in display_value
val = self.value(instance)
^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 903, in value
return self.data_fetch(instance)
^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\kvfinder\tool.py", line 201, in color_func
if s.display and s.atoms.displays.any():
^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\atomic\structure.py", line 529, in _get_display
return Model.display.fget(self)
^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
TypeError: object of type 'NoneType' has no len()
TypeError: object of type 'NoneType' has no len()
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
See log for complete Python traceback.
Traceback (most recent call last):
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 34, in data
val = col.display_value(item)
^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 886, in display_value
val = self.value(instance)
^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 903, in value
return self.data_fetch(instance)
^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\kvfinder\tool.py", line 201, in color_func
if s.display and s.atoms.displays.any():
^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\atomic\structure.py", line 529, in _get_display
return Model.display.fget(self)
^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
TypeError: object of type 'NoneType' has no len()
TypeError: object of type 'NoneType' has no len()
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
See log for complete Python traceback.
Traceback (most recent call last):
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 34, in data
val = col.display_value(item)
^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 886, in display_value
val = self.value(instance)
^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 903, in value
return self.data_fetch(instance)
^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\kvfinder\tool.py", line 201, in color_func
if s.display and s.atoms.displays.any():
^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\atomic\structure.py", line 529, in _get_display
return Model.display.fget(self)
^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
TypeError: object of type 'NoneType' has no len()
TypeError: object of type 'NoneType' has no len()
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
See log for complete Python traceback.
Traceback (most recent call last):
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 34, in data
val = col.display_value(item)
^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 886, in display_value
val = self.value(instance)
^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 903, in value
return self.data_fetch(instance)
^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\kvfinder\tool.py", line 201, in color_func
if s.display and s.atoms.displays.any():
^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\atomic\structure.py", line 529, in _get_display
return Model.display.fget(self)
^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
TypeError: object of type 'NoneType' has no len()
TypeError: object of type 'NoneType' has no len()
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
See log for complete Python traceback.
Traceback (most recent call last):
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 34, in data
val = col.display_value(item)
^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 886, in display_value
val = self.value(instance)
^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 903, in value
return self.data_fetch(instance)
^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\kvfinder\tool.py", line 201, in color_func
if s.display and s.atoms.displays.any():
^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\atomic\structure.py", line 529, in _get_display
return Model.display.fget(self)
^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
TypeError: object of type 'NoneType' has no len()
TypeError: object of type 'NoneType' has no len()
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
See log for complete Python traceback.
Traceback (most recent call last):
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 34, in data
val = col.display_value(item)
^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 886, in display_value
val = self.value(instance)
^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 903, in value
return self.data_fetch(instance)
^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\kvfinder\tool.py", line 201, in color_func
if s.display and s.atoms.displays.any():
^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\atomic\structure.py", line 529, in _get_display
return Model.display.fget(self)
^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
TypeError: object of type 'NoneType' has no len()
TypeError: object of type 'NoneType' has no len()
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
See log for complete Python traceback.
Traceback (most recent call last):
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 34, in data
val = col.display_value(item)
^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 886, in display_value
val = self.value(instance)
^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 903, in value
return self.data_fetch(instance)
^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\kvfinder\tool.py", line 201, in color_func
if s.display and s.atoms.displays.any():
^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\atomic\structure.py", line 529, in _get_display
return Model.display.fget(self)
^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
TypeError: object of type 'NoneType' has no len()
TypeError: object of type 'NoneType' has no len()
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
See log for complete Python traceback.
Traceback (most recent call last):
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 34, in data
val = col.display_value(item)
^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 886, in display_value
val = self.value(instance)
^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 903, in value
return self.data_fetch(instance)
^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\kvfinder\tool.py", line 201, in color_func
if s.display and s.atoms.displays.any():
^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\atomic\structure.py", line 529, in _get_display
return Model.display.fget(self)
^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
TypeError: object of type 'NoneType' has no len()
TypeError: object of type 'NoneType' has no len()
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
See log for complete Python traceback.
Traceback (most recent call last):
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 34, in data
val = col.display_value(item)
^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 886, in display_value
val = self.value(instance)
^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 903, in value
return self.data_fetch(instance)
^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\kvfinder\tool.py", line 201, in color_func
if s.display and s.atoms.displays.any():
^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\atomic\structure.py", line 529, in _get_display
return Model.display.fget(self)
^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
TypeError: object of type 'NoneType' has no len()
TypeError: object of type 'NoneType' has no len()
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
See log for complete Python traceback.
Traceback (most recent call last):
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 34, in data
val = col.display_value(item)
^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 886, in display_value
val = self.value(instance)
^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 903, in value
return self.data_fetch(instance)
^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\kvfinder\tool.py", line 201, in color_func
if s.display and s.atoms.displays.any():
^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\atomic\structure.py", line 529, in _get_display
return Model.display.fget(self)
^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
TypeError: object of type 'NoneType' has no len()
TypeError: object of type 'NoneType' has no len()
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
See log for complete Python traceback.
Traceback (most recent call last):
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 34, in data
val = col.display_value(item)
^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 886, in display_value
val = self.value(instance)
^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 903, in value
return self.data_fetch(instance)
^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\kvfinder\tool.py", line 201, in color_func
if s.display and s.atoms.displays.any():
^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\atomic\structure.py", line 529, in _get_display
return Model.display.fget(self)
^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
TypeError: object of type 'NoneType' has no len()
TypeError: object of type 'NoneType' has no len()
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
See log for complete Python traceback.
Traceback (most recent call last):
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 34, in data
val = col.display_value(item)
^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 886, in display_value
val = self.value(instance)
^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 903, in value
return self.data_fetch(instance)
^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\kvfinder\tool.py", line 201, in color_func
if s.display and s.atoms.displays.any():
^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\atomic\structure.py", line 529, in _get_display
return Model.display.fget(self)
^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
TypeError: object of type 'NoneType' has no len()
TypeError: object of type 'NoneType' has no len()
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
See log for complete Python traceback.
Traceback (most recent call last):
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 34, in data
val = col.display_value(item)
^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 886, in display_value
val = self.value(instance)
^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 903, in value
return self.data_fetch(instance)
^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\kvfinder\tool.py", line 201, in color_func
if s.display and s.atoms.displays.any():
^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\atomic\structure.py", line 529, in _get_display
return Model.display.fget(self)
^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
TypeError: object of type 'NoneType' has no len()
TypeError: object of type 'NoneType' has no len()
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
See log for complete Python traceback.
Traceback (most recent call last):
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 34, in data
val = col.display_value(item)
^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 886, in display_value
val = self.value(instance)
^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 903, in value
return self.data_fetch(instance)
^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\kvfinder\tool.py", line 201, in color_func
if s.display and s.atoms.displays.any():
^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\atomic\structure.py", line 529, in _get_display
return Model.display.fget(self)
^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
TypeError: object of type 'NoneType' has no len()
TypeError: object of type 'NoneType' has no len()
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
See log for complete Python traceback.
Traceback (most recent call last):
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 34, in data
val = col.display_value(item)
^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 886, in display_value
val = self.value(instance)
^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 903, in value
return self.data_fetch(instance)
^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\kvfinder\tool.py", line 201, in color_func
if s.display and s.atoms.displays.any():
^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\atomic\structure.py", line 529, in _get_display
return Model.display.fget(self)
^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
TypeError: object of type 'NoneType' has no len()
TypeError: object of type 'NoneType' has no len()
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
See log for complete Python traceback.
Traceback (most recent call last):
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 34, in data
val = col.display_value(item)
^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 886, in display_value
val = self.value(instance)
^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 903, in value
return self.data_fetch(instance)
^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\kvfinder\tool.py", line 201, in color_func
if s.display and s.atoms.displays.any():
^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\atomic\structure.py", line 529, in _get_display
return Model.display.fget(self)
^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
TypeError: object of type 'NoneType' has no len()
TypeError: object of type 'NoneType' has no len()
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
See log for complete Python traceback.
Traceback (most recent call last):
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 34, in data
val = col.display_value(item)
^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 886, in display_value
val = self.value(instance)
^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 903, in value
return self.data_fetch(instance)
^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\kvfinder\tool.py", line 201, in color_func
if s.display and s.atoms.displays.any():
^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\atomic\structure.py", line 529, in _get_display
return Model.display.fget(self)
^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
TypeError: object of type 'NoneType' has no len()
TypeError: object of type 'NoneType' has no len()
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
See log for complete Python traceback.
Traceback (most recent call last):
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 34, in data
val = col.display_value(item)
^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 886, in display_value
val = self.value(instance)
^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 903, in value
return self.data_fetch(instance)
^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\kvfinder\tool.py", line 201, in color_func
if s.display and s.atoms.displays.any():
^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\atomic\structure.py", line 529, in _get_display
return Model.display.fget(self)
^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
TypeError: object of type 'NoneType' has no len()
TypeError: object of type 'NoneType' has no len()
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
See log for complete Python traceback.
Traceback (most recent call last):
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 34, in data
val = col.display_value(item)
^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 886, in display_value
val = self.value(instance)
^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 903, in value
return self.data_fetch(instance)
^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\kvfinder\tool.py", line 201, in color_func
if s.display and s.atoms.displays.any():
^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\atomic\structure.py", line 529, in _get_display
return Model.display.fget(self)
^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
TypeError: object of type 'NoneType' has no len()
TypeError: object of type 'NoneType' has no len()
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
See log for complete Python traceback.
Traceback (most recent call last):
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 34, in data
val = col.display_value(item)
^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 886, in display_value
val = self.value(instance)
^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 903, in value
return self.data_fetch(instance)
^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\kvfinder\tool.py", line 201, in color_func
if s.display and s.atoms.displays.any():
^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\atomic\structure.py", line 529, in _get_display
return Model.display.fget(self)
^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
TypeError: object of type 'NoneType' has no len()
TypeError: object of type 'NoneType' has no len()
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
See log for complete Python traceback.
Traceback (most recent call last):
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 34, in data
val = col.display_value(item)
^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 886, in display_value
val = self.value(instance)
^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 903, in value
return self.data_fetch(instance)
^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\kvfinder\tool.py", line 201, in color_func
if s.display and s.atoms.displays.any():
^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\atomic\structure.py", line 529, in _get_display
return Model.display.fget(self)
^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
TypeError: object of type 'NoneType' has no len()
TypeError: object of type 'NoneType' has no len()
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
See log for complete Python traceback.
Traceback (most recent call last):
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 34, in data
val = col.display_value(item)
^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 886, in display_value
val = self.value(instance)
^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 903, in value
return self.data_fetch(instance)
^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\kvfinder\tool.py", line 201, in color_func
if s.display and s.atoms.displays.any():
^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\atomic\structure.py", line 529, in _get_display
return Model.display.fget(self)
^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
TypeError: object of type 'NoneType' has no len()
TypeError: object of type 'NoneType' has no len()
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
See log for complete Python traceback.
Traceback (most recent call last):
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 34, in data
val = col.display_value(item)
^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 886, in display_value
val = self.value(instance)
^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 903, in value
return self.data_fetch(instance)
^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\kvfinder\tool.py", line 201, in color_func
if s.display and s.atoms.displays.any():
^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\atomic\structure.py", line 529, in _get_display
return Model.display.fget(self)
^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
TypeError: object of type 'NoneType' has no len()
TypeError: object of type 'NoneType' has no len()
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
See log for complete Python traceback.
Traceback (most recent call last):
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 34, in data
val = col.display_value(item)
^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 886, in display_value
val = self.value(instance)
^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 903, in value
return self.data_fetch(instance)
^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\kvfinder\tool.py", line 201, in color_func
if s.display and s.atoms.displays.any():
^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\atomic\structure.py", line 529, in _get_display
return Model.display.fget(self)
^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
TypeError: object of type 'NoneType' has no len()
TypeError: object of type 'NoneType' has no len()
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
See log for complete Python traceback.
Traceback (most recent call last):
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 34, in data
val = col.display_value(item)
^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 886, in display_value
val = self.value(instance)
^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 903, in value
return self.data_fetch(instance)
^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\kvfinder\tool.py", line 201, in color_func
if s.display and s.atoms.displays.any():
^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\atomic\structure.py", line 529, in _get_display
return Model.display.fget(self)
^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
TypeError: object of type 'NoneType' has no len()
TypeError: object of type 'NoneType' has no len()
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
See log for complete Python traceback.
Traceback (most recent call last):
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 34, in data
val = col.display_value(item)
^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 886, in display_value
val = self.value(instance)
^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 903, in value
return self.data_fetch(instance)
^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\kvfinder\tool.py", line 201, in color_func
if s.display and s.atoms.displays.any():
^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\atomic\structure.py", line 529, in _get_display
return Model.display.fget(self)
^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
TypeError: object of type 'NoneType' has no len()
TypeError: object of type 'NoneType' has no len()
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
See log for complete Python traceback.
Traceback (most recent call last):
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 34, in data
val = col.display_value(item)
^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 886, in display_value
val = self.value(instance)
^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\ui\widgets\item_table.py", line 903, in value
return self.data_fetch(instance)
^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\kvfinder\tool.py", line 201, in color_func
if s.display and s.atoms.displays.any():
^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\atomic\structure.py", line 529, in _get_display
return Model.display.fget(self)
^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
TypeError: object of type 'NoneType' has no len()
TypeError: object of type 'NoneType' has no len()
File "C:\Program Files\ChimeraX 1.10rc202506130232\bin\Lib\site-
packages\chimerax\graphics\drawing.py", line 389, in get_display
return self._any_displayed_positions and len(self._positions) > 0
^^^^^^^^^^^^^^^^^^^^
See log for complete Python traceback.
OpenGL version: 3.3.0 NVIDIA 390.77
OpenGL renderer: Quadro K620/PCIe/SSE2
OpenGL vendor: NVIDIA Corporation
Python: 3.11.4
Locale: zh_TW.cp950
Qt version: PyQt6 6.8.1, Qt 6.8.2
Qt runtime version: 6.8.2
Qt platform: windows
Manufacturer: System manufacturer
Model: System Product Name
OS: Microsoft Windows 10 專業版 (Build 19045)
Memory: 8,517,070,848
MaxProcessMemory: 137,438,953,344
CPU: 8 Intel(R) Core(TM) i7-7700 CPU @ 3.60GHz
OSLanguage: zh-TW
Installed Packages:
alabaster: 1.0.0
appdirs: 1.4.4
asttokens: 3.0.0
auditwheel: 6.4.0
babel: 2.17.0
beautifulsoup4: 4.13.3
blockdiag: 3.0.0
blosc2: 3.4.0
build: 1.2.2.post1
certifi: 2025.6.15
cftime: 1.6.4.post1
charset-normalizer: 3.4.2
ChimeraX-AddCharge: 1.5.19
ChimeraX-AddH: 2.2.7
ChimeraX-AlignmentAlgorithms: 2.0.2
ChimeraX-AlignmentHdrs: 3.6.1
ChimeraX-AlignmentMatrices: 2.1
ChimeraX-Alignments: 2.20.2
ChimeraX-AlphaFold: 1.0.1
ChimeraX-AltlocExplorer: 1.1.2
ChimeraX-AmberInfo: 1.0
ChimeraX-Aniso: 1.1.4
ChimeraX-Arrays: 1.1
ChimeraX-Atomic: 1.60.7
ChimeraX-AtomicLibrary: 14.1.18
ChimeraX-AtomSearch: 2.0.1
ChimeraX-AxesPlanes: 2.4
ChimeraX-BasicActions: 1.1.3
ChimeraX-BILD: 1.0
ChimeraX-BlastProtein: 3.0.0
ChimeraX-Boltz: 1.0
ChimeraX-BondRot: 2.0.4
ChimeraX-BugReporter: 1.0.2
ChimeraX-BuildStructure: 2.13.1
ChimeraX-Bumps: 1.0
ChimeraX-BundleBuilder: 1.5.1
ChimeraX-ButtonPanel: 1.0.1
ChimeraX-CageBuilder: 1.0.1
ChimeraX-CellPack: 1.0
ChimeraX-Centroids: 1.4
ChimeraX-ChangeChains: 1.1
ChimeraX-CheckWaters: 1.5
ChimeraX-ChemGroup: 2.0.2
ChimeraX-Clashes: 2.3
ChimeraX-ColorActions: 1.0.5
ChimeraX-ColorGlobe: 1.0
ChimeraX-ColorKey: 1.5.8
ChimeraX-CommandLine: 1.3
ChimeraX-ConnectStructure: 2.0.1
ChimeraX-Contacts: 1.0.1
ChimeraX-Core: 1.10rc202506130232
ChimeraX-CoreFormats: 1.2
ChimeraX-coulombic: 1.4.5
ChimeraX-Crosslinks: 1.0
ChimeraX-Crystal: 1.0
ChimeraX-CrystalContacts: 1.0.1
ChimeraX-DataFormats: 1.2.4
ChimeraX-Dicom: 1.2.7
ChimeraX-DistMonitor: 1.4.2
ChimeraX-DockPrep: 1.1.4
ChimeraX-Dssp: 2.0
ChimeraX-EMDB-SFF: 1.0
ChimeraX-ESMFold: 1.0
ChimeraX-FileHistory: 1.0.1
ChimeraX-FunctionKey: 1.0.1
ChimeraX-Geometry: 1.3
ChimeraX-gltf: 1.0
ChimeraX-Graphics: 1.4.1
ChimeraX-Hbonds: 2.5.1
ChimeraX-Help: 1.3
ChimeraX-HKCage: 1.3
ChimeraX-IHM: 1.1
ChimeraX-ImageFormats: 1.2
ChimeraX-IMOD: 1.0
ChimeraX-IO: 1.0.3
ChimeraX-ItemsInspection: 1.0.1
ChimeraX-IUPAC: 1.0
ChimeraX-KVFinder: 1.6.2
ChimeraX-Label: 1.1.14
ChimeraX-ListInfo: 1.2.2
ChimeraX-Log: 1.2
ChimeraX-LookingGlass: 1.1
ChimeraX-Maestro: 1.9.1
ChimeraX-Map: 1.3
ChimeraX-MapData: 2.0
ChimeraX-MapEraser: 1.0.1
ChimeraX-MapFilter: 2.0.1
ChimeraX-MapFit: 2.0
ChimeraX-MapSeries: 2.1.1
ChimeraX-Markers: 1.0.1
ChimeraX-Mask: 1.0.2
ChimeraX-MatchMaker: 2.2.2
ChimeraX-MCopy: 1.0
ChimeraX-MDcrds: 2.10.1
ChimeraX-MedicalToolbar: 1.1
ChimeraX-Meeting: 1.0.1
ChimeraX-MLP: 1.1.1
ChimeraX-mmCIF: 2.16
ChimeraX-MMTF: 2.2
ChimeraX-ModelArchive: 1.0
ChimeraX-Modeller: 1.5.19
ChimeraX-ModelPanel: 1.5.1
ChimeraX-ModelSeries: 1.0.1
ChimeraX-Mol2: 2.0.3
ChimeraX-Mole: 1.0
ChimeraX-Morph: 1.0.2
ChimeraX-MouseModes: 1.2
ChimeraX-Movie: 1.0
ChimeraX-MutationScores: 1.0
ChimeraX-Neuron: 1.0
ChimeraX-Nifti: 1.2
ChimeraX-NMRSTAR: 1.0.2
ChimeraX-NRRD: 1.2
ChimeraX-Nucleotides: 2.0.3
ChimeraX-OpenCommand: 1.14.1
ChimeraX-OrthoPick: 1.0.1
ChimeraX-PDB: 2.7.10
ChimeraX-PDBBio: 1.0.1
ChimeraX-PDBLibrary: 1.0.4
ChimeraX-PDBMatrices: 1.0
ChimeraX-PickBlobs: 1.0.1
ChimeraX-Positions: 1.0
ChimeraX-PresetMgr: 1.1.3
ChimeraX-ProfileGrids: 1.1.2
ChimeraX-PubChem: 2.2
ChimeraX-ReadPbonds: 1.0.1
ChimeraX-Registration: 1.1.2
ChimeraX-RemoteControl: 1.0
ChimeraX-RenderByAttr: 1.6.3
ChimeraX-RenumberResidues: 1.1
ChimeraX-ResidueFit: 1.0.1
ChimeraX-RestServer: 1.3.1
ChimeraX-RNALayout: 1.0
ChimeraX-RotamerLibMgr: 4.0
ChimeraX-RotamerLibsDunbrack: 2.0
ChimeraX-RotamerLibsDynameomics: 2.0
ChimeraX-RotamerLibsRichardson: 2.0
ChimeraX-SaveCommand: 1.5.1
ChimeraX-SchemeMgr: 1.0
ChimeraX-SDF: 2.0.3
ChimeraX-Segger: 1.0
ChimeraX-Segment: 1.0.1
ChimeraX-Segmentations: 3.5.7
ChimeraX-SelInspector: 1.0
ChimeraX-SeqView: 2.17.1
ChimeraX-Shape: 1.1
ChimeraX-Shell: 1.0.1
ChimeraX-Shortcuts: 1.2.1
ChimeraX-ShowSequences: 1.0.3
ChimeraX-SideView: 1.0.1
ChimeraX-SimilarStructures: 1.0.1
ChimeraX-Smiles: 2.1.2
ChimeraX-SmoothLines: 1.0
ChimeraX-SpaceNavigator: 1.0
ChimeraX-StdCommands: 1.19.1
ChimeraX-STL: 1.0.1
ChimeraX-Storm: 1.0
ChimeraX-StructMeasure: 1.2.1
ChimeraX-Struts: 1.0.1
ChimeraX-Surface: 1.0.1
ChimeraX-SwapAA: 2.0.1
ChimeraX-SwapRes: 2.5.2
ChimeraX-TapeMeasure: 1.0
ChimeraX-TaskManager: 1.0
ChimeraX-Test: 1.0
ChimeraX-Toolbar: 1.2.3
ChimeraX-ToolshedUtils: 1.2.4
ChimeraX-Topography: 1.0
ChimeraX-ToQuest: 1.0
ChimeraX-Tug: 1.0.1
ChimeraX-UI: 1.45.1
ChimeraX-Umap: 1.0
ChimeraX-uniprot: 2.3.1
ChimeraX-UnitCell: 1.0.1
ChimeraX-ViewDockX: 1.4.4
ChimeraX-VIPERdb: 1.0
ChimeraX-Vive: 1.1
ChimeraX-VolumeMenu: 1.0.1
ChimeraX-vrml: 1.0
ChimeraX-VTK: 1.0
ChimeraX-WavefrontOBJ: 1.0
ChimeraX-WebCam: 1.0.2
ChimeraX-WebServices: 1.1.5
ChimeraX-Zone: 1.0.1
colorama: 0.4.6
comm: 0.2.2
comtypes: 1.4.10
contourpy: 1.3.2
coverage: 7.9.1
cxservices: 1.2.3
cycler: 0.12.1
Cython: 3.0.12
debugpy: 1.8.14
decorator: 5.2.1
docutils: 0.21.2
executing: 2.2.0
filelock: 3.18.0
fonttools: 4.58.4
funcparserlib: 2.0.0a0
glfw: 2.9.0
grako: 3.16.5
h5py: 3.14.0
html2text: 2024.2.26
idna: 3.10
ihm: 2.2
imagecodecs: 2024.6.1
imagesize: 1.4.1
iniconfig: 2.1.0
ipykernel: 6.29.5
ipython: 8.26.0
ipywidgets: 8.1.7
jedi: 0.19.1
Jinja2: 3.1.6
jupyter_client: 8.6.3
jupyter_core: 5.8.1
jupyterlab_widgets: 3.0.15
kiwisolver: 1.4.8
line_profiler: 4.2.0
lxml: 5.3.1
lz4: 4.4.4
MarkupSafe: 3.0.2
matplotlib: 3.10.1
matplotlib-inline: 0.1.7
msgpack: 1.1.0
narwhals: 1.43.0
ndindex: 1.10.0
nest-asyncio: 1.6.0
netCDF4: 1.6.5
networkx: 3.3
nibabel: 5.2.0
nptyping: 2.5.0
numexpr: 2.11.0
numpy: 2.2.6
numpy: 1.26.4
OpenMM: 8.2.0
openvr: 1.26.701
packaging: 24.2
ParmEd: 4.2.2
parso: 0.8.4
pep517: 0.13.1
pickleshare: 0.7.5
pillow: 10.4.0
pip: 25.0.1
pkginfo: 1.11.1
platformdirs: 4.3.8
plotly: 6.0.1
pluggy: 1.6.0
prompt_toolkit: 3.0.51
psutil: 7.0.0
pure_eval: 0.2.3
py-cpuinfo: 9.0.0
pycollada: 0.8
pydicom: 2.4.4
pyelftools: 0.32
Pygments: 2.18.0
pyKVFinder: 0.8.1
pynmrstar: 3.3.5
pynrrd: 1.0.0
PyOpenGL: 3.1.9
PyOpenGL-accelerate: 3.1.9
pyopenxr: 1.1.4501
pyparsing: 3.2.3
pyproject_hooks: 1.2.0
PyQt6-commercial: 6.8.1
PyQt6-Qt6: 6.8.2
PyQt6-WebEngine-commercial: 6.8.0
PyQt6-WebEngine-Qt6: 6.8.2
PyQt6_sip: 13.10.0
pytest: 8.4.0
pytest-cov: 6.2.1
python-dateutil: 2.9.0.post0
pytz: 2025.2
pywin32: 310
pyzmq: 27.0.0
qtconsole: 5.5.2
QtPy: 2.4.3
qtshim: 1.1
RandomWords: 0.4.0
requests: 2.32.3
roman-numerals-py: 3.1.0
scipy: 1.14.0
setuptools: 78.1.0
sfftk-rw: 0.8.1
six: 1.16.0
snowballstemmer: 3.0.1
sortedcontainers: 2.4.0
soupsieve: 2.7
Sphinx: 8.2.3
sphinx-autodoc-typehints: 3.1.0
sphinxcontrib-applehelp: 2.0.0
sphinxcontrib-blockdiag: 3.0.0
sphinxcontrib-devhelp: 2.0.0
sphinxcontrib-htmlhelp: 2.1.0
sphinxcontrib-jsmath: 1.0.1
sphinxcontrib-qthelp: 2.0.0
sphinxcontrib-serializinghtml: 2.0.0
stack-data: 0.6.3
superqt: 0.7.1
tables: 3.10.2
tcia_utils: 1.5.1
tifffile: 2025.3.13
tinyarray: 1.2.4
tomlkit: 0.13.2
tornado: 6.5.1
traitlets: 5.14.3
typing_extensions: 4.14.0
tzdata: 2025.2
urllib3: 2.4.0
wcwidth: 0.2.13
webcolors: 24.11.1
wheel: 0.45.1
wheel-filename: 1.4.2
widgetsnbextension: 4.0.14
WMI: 1.5.1
Change History (2)
comment:1 by , 5 months ago
| Component: | Unassigned → Surface/Binding Analysis |
|---|---|
| Owner: | set to |
| Platform: | → all |
| Project: | → ChimeraX |
| Status: | new → accepted |
| Summary: | ChimeraX bug report submission → KVFinder: some how cavity model is closed but still in table |
comment:2 by , 5 months ago
| Resolution: | → can't reproduce |
|---|---|
| Status: | accepted → closed |
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