Opened 5 months ago

Closed 5 months ago

Last modified 5 months ago

#17734 closed defect (can't reproduce)

Crash using open/save dialog

Reported by: chimerax-bug-report@… Owned by: Eric Pettersen
Priority: normal Milestone:
Component: UI Version:
Keywords: Cc: Tom Goddard
Blocked By: Blocking:
Notify when closed: Platform: all
Project: ChimeraX

Description 

The following bug report has been submitted:
Platform:        Windows-10-10.0.26100
ChimeraX Version: 1.10rc202505160006 (2025-05-16 00:06:03 UTC)
Description
Last time you used ChimeraX it crashed.
Please describe steps that led to the crash here.
Windows fatal exception: code 0x8001010e

Thread 0x000009f0 (most recent call first):
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\qtpy\_utils.py", line 193 in _from_kwarg_name_to_kwarg_name_
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\open_command\dialog.py", line 312 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 28 in _file_open
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 56 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\__init__.py", line 37 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\__init__.py", line 1419 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\info.py", line 397 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\tool.py", line 185 in callback
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\ui\gui.py", line 368 in event_loop
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1057 in init
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1220 in 
  File "", line 88 in _run_code
  File "", line 198 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000009f0 (most recent call first):
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\qtpy\_utils.py", line 193 in _from_kwarg_name_to_kwarg_name_
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\open_command\dialog.py", line 312 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 28 in _file_open
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 56 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\__init__.py", line 37 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\__init__.py", line 1419 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\info.py", line 397 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\tool.py", line 185 in callback
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\ui\gui.py", line 368 in event_loop
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1057 in init
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1220 in 
  File "", line 88 in _run_code
  File "", line 198 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000009f0 (most recent call first):
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\qtpy\_utils.py", line 193 in _from_kwarg_name_to_kwarg_name_
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\open_command\dialog.py", line 312 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 28 in _file_open
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 56 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\__init__.py", line 37 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\__init__.py", line 1419 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\info.py", line 397 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\tool.py", line 185 in callback
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\ui\gui.py", line 368 in event_loop
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1057 in init
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1220 in 
  File "", line 88 in _run_code
  File "", line 198 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000009f0 (most recent call first):
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\qtpy\_utils.py", line 193 in _from_kwarg_name_to_kwarg_name_
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\open_command\dialog.py", line 312 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 28 in _file_open
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 56 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\__init__.py", line 37 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\__init__.py", line 1419 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\info.py", line 397 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\tool.py", line 185 in callback
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\ui\gui.py", line 368 in event_loop
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1057 in init
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1220 in 
  File "", line 88 in _run_code
  File "", line 198 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000009f0 (most recent call first):
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\qtpy\_utils.py", line 193 in _from_kwarg_name_to_kwarg_name_
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\open_command\dialog.py", line 312 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 28 in _file_open
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 56 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\__init__.py", line 37 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\__init__.py", line 1419 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\info.py", line 397 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\tool.py", line 185 in callback
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\ui\gui.py", line 368 in event_loop
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1057 in init
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1220 in 
  File "", line 88 in _run_code
  File "", line 198 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000009f0 (most recent call first):
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\qtpy\_utils.py", line 193 in _from_kwarg_name_to_kwarg_name_
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\open_command\dialog.py", line 312 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 28 in _file_open
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 56 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\__init__.py", line 37 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\__init__.py", line 1419 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\info.py", line 397 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\tool.py", line 185 in callback
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\ui\gui.py", line 368 in event_loop
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1057 in init
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1220 in 
  File "", line 88 in _run_code
  File "", line 198 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000009f0 (most recent call first):
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\qtpy\_utils.py", line 193 in _from_kwarg_name_to_kwarg_name_
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\open_command\dialog.py", line 312 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 28 in _file_open
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 56 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\__init__.py", line 37 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\__init__.py", line 1419 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\info.py", line 397 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\tool.py", line 185 in callback
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\ui\gui.py", line 368 in event_loop
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1057 in init
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1220 in 
  File "", line 88 in _run_code
  File "", line 198 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000009f0 (most recent call first):
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\qtpy\_utils.py", line 193 in _from_kwarg_name_to_kwarg_name_
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\open_command\dialog.py", line 312 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 28 in _file_open
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 56 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\__init__.py", line 37 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\__init__.py", line 1419 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\info.py", line 397 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\tool.py", line 185 in callback
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\ui\gui.py", line 368 in event_loop
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1057 in init
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1220 in 
  File "", line 88 in _run_code
  File "", line 198 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000009f0 (most recent call first):
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\qtpy\_utils.py", line 193 in _from_kwarg_name_to_kwarg_name_
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\open_command\dialog.py", line 312 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 28 in _file_open
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 56 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\__init__.py", line 37 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\__init__.py", line 1419 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\info.py", line 397 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\tool.py", line 185 in callback
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\ui\gui.py", line 368 in event_loop
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1057 in init
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1220 in 
  File "", line 88 in _run_code
  File "", line 198 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000009f0 (most recent call first):
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\qtpy\_utils.py", line 193 in _from_kwarg_name_to_kwarg_name_
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\open_command\dialog.py", line 312 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 28 in _file_open
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 56 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\__init__.py", line 37 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\__init__.py", line 1419 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\info.py", line 397 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\tool.py", line 185 in callback
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\ui\gui.py", line 368 in event_loop
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1057 in init
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1220 in 
  File "", line 88 in _run_code
  File "", line 198 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000009f0 (most recent call first):
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\qtpy\_utils.py", line 193 in _from_kwarg_name_to_kwarg_name_
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\open_command\dialog.py", line 312 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 28 in _file_open
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 56 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\__init__.py", line 37 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\__init__.py", line 1419 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\info.py", line 397 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\tool.py", line 185 in callback
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\ui\gui.py", line 368 in event_loop
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1057 in init
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1220 in 
  File "", line 88 in _run_code
  File "", line 198 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000009f0 (most recent call first):
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\qtpy\_utils.py", line 193 in _from_kwarg_name_to_kwarg_name_
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\open_command\dialog.py", line 312 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 28 in _file_open
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 56 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\__init__.py", line 37 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\__init__.py", line 1419 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\info.py", line 397 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\tool.py", line 185 in callback
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\ui\gui.py", line 368 in event_loop
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1057 in init
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1220 in 
  File "", line 88 in _run_code
  File "", line 198 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000009f0 (most recent call first):
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\qtpy\_utils.py", line 193 in _from_kwarg_name_to_kwarg_name_
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\open_command\dialog.py", line 312 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 28 in _file_open
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 56 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\__init__.py", line 37 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\__init__.py", line 1419 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\info.py", line 397 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\tool.py", line 185 in callback
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\ui\gui.py", line 368 in event_loop
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1057 in init
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py"Windows fatal exception: code 0x8001010e

, line Windows fatal exception: code 0x8001010e

1220Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

 in Windows fatal exception: code 0x8001010e


  File "", line 88 in _run_code
  File ""Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

, line 198 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000009f0 (most recent call first):
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\qtpy\_utils.py", line 193 in _from_kwarg_name_to_kwarg_name_
  File Windows fatal exception: "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\open_command\dialog.py"code 0x8001010e

, line 312 in show_open_file_dialog
  File Windows fatal exception: code 0x8001010e

"C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 28 in _file_open
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 56 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\__init__.py", line 37 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\__init__.py", line 1419 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\info.py", line 397 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\tool.py", line 185 in callback
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\ui\gui.py", line 368 in event_loop
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1057 in init
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1220 in 
  File "", line 88 in _run_code
  File "", line 198 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000009f0 (most recent call first):
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\qtpy\_utils.py", line 193 in _from_kwarg_name_to_kwarg_name_
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\open_command\dialog.py", line 312 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 28 in _file_open
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 56 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\__init__.py", line 37 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\__init__.py", line 1419 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\info.py", line 397 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\tool.py", line 185 in callback
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\ui\gui.py", line 368 in event_loop
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1057 in init
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1220 in 
  File "", line 88 in _run_code
  File "", line 198 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000009f0 (most recent call first):
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\qtpy\_utils.py", line 193 in _from_kwarg_name_to_kwarg_name_
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\open_command\dialog.py", line 312 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 28 in _file_open
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 56 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\__init__.py", line 37 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\__init__.py", line 1419 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\info.py", line 397 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\tool.py", line 185 in callback
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\ui\gui.py", line 368 in event_loop
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1057 in init
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1220 in 
  File "", line 88 in _run_code
  File "", line 198 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000009f0 (most recent call first):
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\qtpy\_utils.py", line 193 in _from_kwarg_name_to_kwarg_name_
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\open_command\dialog.py", line 312 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 28 in _file_open
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 56 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\__init__.py", line 37 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\__init__.py", line 1419 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\info.py", line 397 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\tool.py", line 185 in callback
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\ui\gui.py", line 368 in event_loop
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1057 in init
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1220 in 
  File "", line 88 in _run_code
  File "", line 198 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000009f0 (most recent call first):
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\qtpy\_utils.py", line 193 in _from_kwarg_name_to_kwarg_name_
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\open_command\dialog.py", line 312 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 28 in _file_open
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 56 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\__init__.py", line 37 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\__init__.py", line 1419 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\info.py", line 397 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\tool.py", line 185 in callback
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\ui\gui.py", line 368 in event_loop
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1057 in init
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1220 in 
  File "", line 88 in _run_code
  File "", line 198 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000009f0 (most recent call first):
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\qtpy\_utils.py", line 193 in _from_kwarg_name_to_kwarg_name_
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\open_command\dialog.py", line 312 in show_open_file_dialog
  File Windows fatal exception: code 0x8001010e

"C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py"Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

, line 28Windows fatal exception: code 0x8001010e

 in _file_open
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py"Windows fatal exception: code 0x8001010e, line 56

 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\__init__.py"Windows fatal exception: code 0x8001010e

, line Windows fatal exception: code 0x8001010e

37Windows fatal exception: code 0x8001010eWindows fatal exception:  in code 0xrun_provider
  File 8001010e"

C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\__init__.pyWindows fatal exception: code 0x"8001010e, line 

1419Windows fatal exception:  in code 0xrun_provider
8001010e  File 

"Windows fatal exception: code 0xC:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\info.py8001010e"

, line Windows fatal exception: 397 in code 0x8001010e

run_providerWindows fatal exception: 
  File code 0x8001010e"

C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\tool.py"Windows fatal exception: , line code 0x185 in 8001010ecallback


Windows fatal exception: code 0x

  File "8001010eC:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\ui\gui.py"

, line 368 in event_loop
  File Windows fatal exception: code 0x"C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py"8001010e

, line 1057 in init
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1220 in 
  File "", line 88 in _run_code
  File "", line 198 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000009f0 (most recent call first):
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\qtpy\_utils.py", line 193 in _from_kwarg_name_to_kwarg_name_
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\open_command\dialog.py", line 312 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 28 in _file_open
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 56 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\__init__.py"Windows fatal exception: code 0x8001010e

, line 37 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\__init__.py", line 1419 in run_provider
  File Windows fatal exception: "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\info.py"code 0x8001010e

, line 397 in run_provider
  File Windows fatal exception: code 0x8001010e

"C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\tool.py"Windows fatal exception: code 0x8001010e

, line 185 in Windows fatal exception: code 0x8001010e

callback
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\ui\gui.py", line 368 in event_loop
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py"Windows fatal exception: , line 1057 in init
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py"code 0x, line 1220 in 
  File ""8001010e

, line 88 in _run_code
  File ""Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

, line 198 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Windows fatal exception: Thread 0x000009f0 (most recent call first):
code 0x  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\qtpy\_utils.py", line 193 in _from_kwarg_name_to_kwarg_name_
  File "8001010e

C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\open_command\dialog.py", line 312 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 28 in _file_open
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 56 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\__init__.py", line 37 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\__init__.py", line 1419 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\info.py", line 397 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\tool.py", line 185 in callback
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\ui\gui.py", line 368 in event_loop
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py"Windows fatal exception: code 0x8001010e

, line 1057 in init
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1220 in 
  File ""Windows fatal exception: , line 88 in _run_code
  File ""code 0x, line 198 in _run_module_as_main
Windows fatal exception: code 0x8001010e

8001010e

Thread 0x000009f0 (most recent call first):
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\qtpy\_utils.py", line 193 in _from_kwarg_name_to_kwarg_name_
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\open_command\dialog.py"Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: , line code 0x8001010e

312 in show_open_file_dialogWindows fatal exception: code 0x
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py"Windows fatal exception: , line 28 in _file_open8001010e

code 0x
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 56 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\__init__.py", line 37 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\__init__.py", line 1419 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\info.py", line 397 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\tool.py", line 185 in callback
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\ui\gui.py", line 368 in event_loop
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py"Windows fatal exception: , line 1057 in init
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py"8001010e

Windows fatal exception: Windows fatal exception: code 0x8001010e

code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0xWindows fatal exception: code 0x8001010e

8001010e

Windows fatal exception: code 0xWindows fatal exception: , line 1220 in 
8001010e  File ""

, line 88 in _run_code
  File ""code 0x, line 198 in _run_module_as_main
code 0xWindows fatal exception: code 0x8001010e

8001010eThread 0x000009f0 (most recent call first):
  File "8001010eC:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\qtpy\_utils.py", line 193 in _from_kwarg_name_to_kwarg_name_
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\open_command\dialog.pyWindows fatal exception: code 0x8001010e



Windows fatal exception: code 0x8001010e

Windows fatal exception: "

, line 312 in show_open_file_dialog
  File "Windows fatal exception: C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 28 in _file_open
Windows fatal exception:   File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py"code 0x, line 56 in run_provider
8001010e

  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\__init__.py"Windows fatal exception: , line code 0xcode 0x8001010e

8001010eWindows fatal exception: code 0x8001010e

37Windows fatal exception: code 0x8001010e

 in run_provider
Windows fatal exception:   File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\__init__.pycode 0x", line 1419 in run_provider
Windows fatal exception:   File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\info.py", line code 0x397 in run_provider
  File 8001010e

"C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\tool.py"code 0x, line 185 in 8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: Windows fatal exception: code 0x8001010e



Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010ecode 0x

8001010e

8001010eWindows fatal exception: code 0x8001010e



callbackWindows fatal exception: code 0x8001010e


  File Windows fatal exception: "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\ui\gui.py"code 0x8001010e

, line Windows fatal exception: code 0x8001010e

368 in Windows fatal exception: event_loop
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py"Windows fatal exception: , line 1057 in init
  File code 0x"C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py"8001010e

code 0x8001010eWindows fatal exception: code 0x8001010e

, line 1220 in 
  File 

""Windows fatal exception: , line 88 in _run_code
Windows fatal exception: code 0x8001010e

code 0xWindows fatal exception: code 0x8001010e

8001010e

Windows fatal exception: Windows fatal exception: code 0x8001010e

code 0x8001010eWindows fatal exception: code 0x8001010e



Windows fatal exception: Windows fatal exception: code 0x8001010e

code 0x8001010e

Windows fatal exception: code 0x8001010e

  File "", line Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

198 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Thread 0x000009f0 (most recent call first):
Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

  File Windows fatal exception: code 0x8001010e

"C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\qtpy\_utils.py", line 193 in _from_kwarg_name_to_kwarg_name_
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\open_command\dialog.py", line 312 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 28 in _file_open
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 56 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\__init__.py", line 37 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\__init__.py", line 1419 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\info.py", line 397 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\tool.py", line 185 in callback
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\ui\gui.py", line 368 in event_loop
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1057 in init
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1220 in 
  File "", line 88 in _run_code
  File "", line 198 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000009f0 (most recent call first):
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\qtpy\_utils.py", line 193 in _from_kwarg_name_to_kwarg_name_
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\open_command\dialog.py", line 312 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 28 in _file_open
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 56 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\__init__.py", line 37 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\__init__.py", line 1419 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\info.py", line 397 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\tool.py", line 185 in callback
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\ui\gui.py", line 368 in event_loop
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1057 in init
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1220 in 
  File "", line 88 in _run_code
  File "", line 198 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000009f0 (most recent call first):
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\qtpy\_utils.py", line 193 in _from_kwarg_name_to_kwarg_name_
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\open_command\dialog.py", line 312 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 28 in _file_open
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 56 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\__init__.py", line 37 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\__init__.py", line 1419 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\info.py", line 397 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\tool.py", line 185 in callback
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\ui\gui.py", line 368 in event_loop
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1057 in init
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1220 in 
  File "", line 88 in _run_code
  File "", line 198 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000009f0 (most recent call first):
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\qtpy\_utils.py", line 193 in _from_kwarg_name_to_kwarg_name_
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\open_command\dialog.py", line 312 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 28 in _file_open
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 56 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\__init__.py", line 37 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\__init__.py", line 1419 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\info.py", line 397 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\tool.py", line 185 in callback
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\ui\gui.py", line 368 in event_loop
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1057 in init
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1220 in 
  File "", line 88 in _run_code
  File "", line 198 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000009f0 (most recent call first):
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\qtpy\_utils.py", line 193 in _from_kwarg_name_to_kwarg_name_
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\open_command\dialog.py", line 312 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 28 in _file_open
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 56 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\__init__.py", line 37 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\__init__.py", line 1419 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\info.py", line 397 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\tool.py", line 185 in callback
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\ui\gui.py", line 368 in event_loop
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1057 in init
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1220 in 
  File "", line 88 in _run_code
  File "", line 198 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000009f0 (most recent call first):
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\qtpy\_utils.py", line 193 in _from_kwarg_name_to_kwarg_name_
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\open_command\dialog.py", line 312 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 28 in _file_open
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 56 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\__init__.py", line 37 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\__init__.py", line 1419 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\info.py", line 397 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\tool.py", line 185 in callback
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\ui\gui.py", line 368 in event_loop
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1057 in init
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1220 in 
  File "", line 88 in _run_code
  File "", line 198 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000009f0 (most recent call first):
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\qtpy\_utils.py", line 193 in _from_kwarg_name_to_kwarg_name_
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\open_command\dialog.py", line 312 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 28 in _file_open
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 56 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\__init__.py", line 37 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\__init__.py", line 1419 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\info.py", line 397 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\tool.py", line 185 in callback
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\ui\gui.py", line 368 in event_loop
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1057 in init
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1220 in 
  File "", line 88 in _run_code
  File "", line 198 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000009f0 (most recent call first):
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\qtpy\_utils.py", line 193 in _from_kwarg_name_to_kwarg_name_
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\open_command\dialog.py", line 312 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 28 in _file_open
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 56 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\__init__.py", line 37 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\__init__.py", line 1419 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\info.py", line 397 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\tool.py", line 185 in callback
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\ui\gui.py", line 368 in event_loop
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1057 in init
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1220 in 
  File "", line 88 in _run_code
  File "", line 198 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000009f0 (most recent call first):
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\qtpy\_utils.py", line 193 in _from_kwarg_name_to_kwarg_name_
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\open_command\dialog.py", line 312 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 28 in _file_open
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 56 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\__init__.py", line 37 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\__init__.py", line 1419 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\info.py", line 397 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\tool.py", line 185 in callback
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\ui\gui.py", line 368 in event_loop
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1057 in init
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1220 in 
  File "", line 88 in _run_code
  File "", line 198 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000009f0 (most recent call first):
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\qtpy\_utils.py", line 193 in _from_kwarg_name_to_kwarg_name_
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\open_command\dialog.py", line 312 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 28 in _file_open
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 56 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\__init__.py", line 37 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\__init__.py", line 1419 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\info.py", line 397 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\tool.py", line 185 in callback
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\ui\gui.py", line 368 in event_loop
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1057 in init
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1220 in 
  File "", line 88 in _run_code
  File "", line 198 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000009f0 (most recent call first):
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\qtpy\_utils.py", line 193 in _from_kwarg_name_to_kwarg_name_
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\open_command\dialog.py", line 312 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 28 in _file_open
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 56 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\__init__.py", line 37 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\__init__.py", line 1419 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\info.py", line 397 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\tool.py", line 185 in callback
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\ui\gui.py", line 368 in event_loop
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1057 in init
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1220 in 
  File "", line 88 in _run_code
  File "", line 198 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000009f0 (most recent call first):
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\qtpy\_utils.py", line 193 in _from_kwarg_name_to_kwarg_name_
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\open_command\dialog.py", line 312 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 28 in _file_open
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 56 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\__init__.py", line 37 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\__init__.py", line 1419 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\info.py", line 397 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\tool.py", line 185 in callback
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\ui\gui.py", line 368 in event_loop
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1057 in init
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1220 in 
  File "", line 88 in _run_code
  File "", line 198 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000009f0 (most recent call first):
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\qtpy\_utils.py", line 193 in _from_kwarg_name_to_kwarg_name_
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\open_command\dialog.py", line 312 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 28 in _file_open
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 56 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\__init__.py", line 37 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\__init__.py", line 1419 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\info.py", line 397 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\tool.py", line 185 in callback
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\ui\gui.py", line 368 in event_loop
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1057 in init
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1220 in 
  File "", line 88 in _run_code
  File "", line 198 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000009f0 (most recent call first):
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\qtpy\_utils.py", line 193 in _from_kwarg_name_to_kwarg_name_
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\open_command\dialog.py", line 312 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 28 in _file_open
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 56 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\__init__.py", line 37 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\__init__.py", line 1419 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\info.py", line 397 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\tool.py", line 185 in callback
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\ui\gui.py", line 368 in event_loop
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1057 in init
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1220 in 
  File "", line 88 in _run_code
  File "", line 198 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000009f0 (most recent call first):
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\qtpy\_utils.py", line 193 in _from_kwarg_name_to_kwarg_name_
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\open_command\dialog.py", line 312 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 28 in _file_open
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 56 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\__init__.py", line 37 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\__init__.py", line 1419 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\info.py", line 397 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\tool.py", line 185 in callback
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\ui\gui.py", line 368 in event_loop
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1057 in init
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1220 in 
  File "", line 88 in _run_code
  File "", line 198 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000009f0 (most recent call first):
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\qtpy\_utils.py", line 193 in _from_kwarg_name_to_kwarg_name_
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\open_command\dialog.py", line 312 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 28 in _file_open
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 56 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\__init__.py", line 37 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\__init__.py", line 1419 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\info.py", line 397 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\tool.py", line 185 in callback
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\ui\gui.py", line 368 in event_loop
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1057 in init
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1220 in 
  File "", line 88 in _run_code
  File "", line 198 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000009f0 (most recent call first):
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\qtpy\_utils.py", line 193 in _from_kwarg_name_to_kwarg_name_
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\open_command\dialog.py", line 312 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 28 in _file_open
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 56 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\__init__.py", line 37 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\__init__.py", line 1419 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\info.py", line 397 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\tool.py", line 185 in callback
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\ui\gui.py", line 368 in event_loop
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1057 in init
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1220 in 
  File "", line 88 in _run_code
  File "", line 198 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000009f0 (most recent call first):
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\qtpy\_utils.py", line 193 in _from_kwarg_name_to_kwarg_name_
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\open_command\dialog.py", line 312 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 28 in _file_open
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 56 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\__init__.py", line 37 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\__init__.py", line 1419 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\info.py", line 397 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\tool.py", line 185 in callback
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\ui\gui.py", line 368 in event_loop
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1057 in init
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1220 in 
  File "", line 88 in _run_code
  File "", line 198 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000009f0 (most recent call first):
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\qtpy\_utils.py", line 193 in _from_kwarg_name_to_kwarg_name_
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\open_command\dialog.py", line 312 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 28 in _file_open
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 56 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\__init__.py", line 37 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\__init__.py", line 1419 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\info.py", line 397 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\tool.py", line 185 in callback
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\ui\gui.py", line 368 in event_loop
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1057 in init
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1220 in 
  File "", line 88 in _run_code
  File "", line 198 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000009f0 (most recent call first):
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\qtpy\_utils.py", line 193 in _from_kwarg_name_to_kwarg_name_
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\open_command\dialog.py", line 312 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 28 in _file_open
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 56 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\__init__.py", line 37 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\__init__.py", line 1419 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\info.py", line 397 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\tool.py", line 185 in callback
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\ui\gui.py", line 368 in event_loop
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1057 in init
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1220 in 
  File "", line 88 in _run_code
  File "", line 198 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000009f0 (most recent call first):
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\qtpy\_utils.py", line 193 in _from_kwarg_name_to_kwarg_name_
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\open_command\dialog.py", line 312 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 28 in _file_open
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 56 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\__init__.py", line 37 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\__init__.py", line 1419 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\info.py", line 397 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\tool.py", line 185 in callback
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\ui\gui.py", line 368 in event_loop
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1057 in init
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1220 in 
  File "", line 88 in _run_code
  File "", line 198 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000009f0 (most recent call first):
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\qtpy\_utils.py", line 193 in _from_kwarg_name_to_kwarg_name_
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\open_command\dialog.py", line 312 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 28 in _file_open
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 56 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\__init__.py", line 37 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\__init__.py", line 1419 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\info.py", line 397 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\tool.py", line 185 in callback
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\ui\gui.py", line 368 in event_loop
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1057 in init
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1220 in 
  File "", line 88 in _run_code
  File "", line 198 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000009f0 (most recent call first):
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\qtpy\_utils.py", line 193 in _from_kwarg_name_to_kwarg_name_
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\open_command\dialog.py", line 312 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 28 in _file_open
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 56 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\__init__.py", line 37 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\__init__.py", line 1419 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\info.py", line 397 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\tool.py", line 185 in callback
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\ui\gui.py", line 368 in event_loop
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1057 in init
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1220 in 
  File "", line 88 in _run_code
  File "", line 198 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000009f0 (most recent call first):
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\qtpy\_utils.py", line 193 in _from_kwarg_name_to_kwarg_name_
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\open_command\dialog.py", line 312 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 28 in _file_open
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 56 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\__init__.py", line 37 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\__init__.py", line 1419 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\info.py", line 397 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\tool.py", line 185 in callback
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\ui\gui.py", line 368 in event_loop
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1057 in init
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1220 in 
  File "", line 88 in _run_code
  File "", line 198 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000009f0 (most recent call first):
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\qtpy\_utils.py", line 193 in _from_kwarg_name_to_kwarg_name_
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\open_command\dialog.py", line 312 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 28 in _file_open
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 56 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\__init__.py", line 37 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\__init__.py", line 1419 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\info.py", line 397 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\tool.py", line 185 in callback
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\ui\gui.py", line 368 in event_loop
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1057 in init
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1220 in 
  File "", line 88 in _run_code
  File "", line 198 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000009f0 (most recent call first):
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\qtpy\_utils.py", line 193 in _from_kwarg_name_to_kwarg_name_
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\open_command\dialog.py", line 312 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 28 in _file_open
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 56 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\__init__.py", line 37 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\__init__.py", line 1419 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\info.py", line 397 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\tool.py", line 185 in callback
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\ui\gui.py", line 368 in event_loop
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1057 in init
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1220 in 
  File "", line 88 in _run_code
  File "", line 198 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000009f0 (most recent call first):
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\qtpy\_utils.py", line 193 in _from_kwarg_name_to_kwarg_name_
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\open_command\dialog.py", line 312 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 28 in _file_open
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 56 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\__init__.py", line 37 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\__init__.py", line 1419 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\info.py", line 397 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\tool.py", line 185 in callback
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\ui\gui.py", line 368 in event_loop
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1057 in init
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1220 in 
  File "", line 88 in _run_code
  File "", line 198 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000009f0 (most recent call first):
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\qtpy\_utils.py", line 193 in _from_kwarg_name_to_kwarg_name_
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\open_command\dialog.py", line 312 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 28 in _file_open
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 56 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\__init__.py", line 37 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\__init__.py", line 1419 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\info.py", line 397 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\tool.py", line 185 in callback
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\ui\gui.py", line 368 in event_loop
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1057 in init
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1220 in 
  File "", line 88 in _run_code
  File "", line 198 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000009f0 (most recent call first):
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\qtpy\_utils.py", line 193 in _from_kwarg_name_to_kwarg_name_
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\open_command\dialog.py", line 312 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 28 in _file_open
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 56 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\__init__.py", line 37 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\__init__.py", line 1419 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\info.py", line 397 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\tool.py", line 185 in callback
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\ui\gui.py", line 368 in event_loop
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1057 in init
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1220 in 
  File "", line 88 in _run_code
  File "", line 198 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000009f0 (most recent call first):
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\qtpy\_utils.py", line 193 in _from_kwarg_name_to_kwarg_name_
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\open_command\dialog.py", line 312 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 28 in _file_open
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 56 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\__init__.py", line 37 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\__init__.py", line 1419 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\info.py", line 397 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\tool.py", line 185 in callback
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\ui\gui.py", line 368 in event_loop
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1057 in init
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1220 in 
  File "", line 88 in _run_code
  File "", line 198 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Thread 0xWindows fatal exception: code 0x8001010e

000009f0 (most recent call first):
Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

  File Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

"Windows fatal exception: code 0x8001010e

C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\qtpy\_utils.py", line 193 in _from_kwarg_name_to_kwarg_name_
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\open_command\dialog.py", line 312 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 28 in _file_open
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 56 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\__init__.py", line 37 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\__init__.py", line 1419 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\info.py", line 397 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\tool.py", line 185 in callback
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\ui\gui.py", line 368 in event_loop
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1057 in init
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1220 in 
  File "", line 88 in _run_code
  File "", line 198 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Thread 0x000009f0 (most recent call first):
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\qtpy\_utils.py"Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

, line Windows fatal exception: code 0x8001010e

193 in _from_kwarg_name_to_kwarg_name_
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\open_command\dialog.py"Windows fatal exception: code 0x8001010e

, line 312 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 28 in _file_open
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 56 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\__init__.pyWindows fatal exception: ", line 37 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\__init__.py", line 1419 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\info.py"code 0x, line 397 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\tool.py", line 185 in callback
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\ui\gui.py", line 368 in event_loop
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py"8001010e

, line 1057 in init
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py"Windows fatal exception: code 0x8001010e

, line 1220 in 
  File ""Windows fatal exception: code 0x8001010e

, line 88 in _run_code
  File "", line 198 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000009f0 (most recent call first):
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\qtpy\_utils.py", line 193 in _from_kwarg_name_to_kwarg_name_
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\open_command\dialog.py", line 312 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 28 in _file_open
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 56 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\__init__.py", line 37 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\__init__.py", line 1419 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\info.py", line 397 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\tool.py", line 185 in callback
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\ui\gui.py", line 368 in event_loop
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1057 in init
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1220 in 
  File "", line 88 in _run_code
  File "", line 198 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000009f0 (most recent call first):
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\qtpy\_utils.py", line 193 in _from_kwarg_name_to_kwarg_name_
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\open_command\dialog.py", line 312 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 28 in _file_open
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 56 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\__init__.py", line 37 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\__init__.py", line 1419 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\info.py", line 397 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\tool.py", line 185 in callback
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\ui\gui.py", line 368 in event_loop
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1057 in init
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1220 in 
  File "", line 88 in _run_code
  File "", line 198 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000009f0 (most recent call first):
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\qtpy\_utils.py", line 193 in _from_kwarg_name_to_kwarg_name_
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\open_command\dialog.py", line 312 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 28 in _file_open
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 56 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\__init__.py", line 37 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\__init__.py", line 1419 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\info.py", line 397 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\tool.py", line 185 in callback
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\ui\gui.py", line 368 in event_loop
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1057 in init
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1220 in 
  File "", line 88 in _run_code
  File "", line 198 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000009f0 (most recent call first):
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\qtpy\_utils.py", line 193 in _from_kwarg_name_to_kwarg_name_
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\open_command\dialog.py", line 312 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 28 in _file_open
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 56 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\__init__.py", line 37 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\__init__.py", line 1419 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\info.py", line 397 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\tool.py", line 185 in callback
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\ui\gui.py", line 368 in event_loop
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1057 in init
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1220 in 
  File "", line 88 in _run_code
  File "", line 198 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000009f0 (most recent call first):
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\qtpy\_utils.py", line 193 in _from_kwarg_name_to_kwarg_name_
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\open_command\dialog.py", line 312 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 28 in _file_open
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 56 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\__init__.py", line 37 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\__init__.py", line 1419 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\info.py", line 397 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\tool.py", line 185 in callback
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\ui\gui.py", line 368 in event_loop
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1057 in init
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1220 in 
  File "", line 88 in _run_code
  File "", line 198 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000009f0 (most recent call first):
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\qtpy\_utils.py", line 193 in _from_kwarg_name_to_kwarg_name_
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\open_command\dialog.py", line 312 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 28 in _file_open
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 56 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\__init__.py", line 37 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\__init__.py", line 1419 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\info.py", line 397 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\tool.py", line 185 in callback
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\ui\gui.py", line 368 in event_loop
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1057 in init
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1220 in 
  File "", line 88 in _run_code
  File "", line 198 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000009f0 (most recent call first):
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\qtpy\_utils.py", line 193 in _from_kwarg_name_to_kwarg_name_
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\open_command\dialog.py", line 312 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 28 in _file_open
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 56 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\__init__.py", line 37 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\__init__.py", line 1419 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\info.py", line 397 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\tool.py", line 185 in callback
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\ui\gui.py", line 368 in event_loop
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1057 in init
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1220 in 
  File "", line 88 in _run_code
  File "", line 198 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000009f0 (most recent call first):
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\qtpy\_utils.py", line 193 in _from_kwarg_name_to_kwarg_name_
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\open_command\dialog.py", line 312 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 28 in _file_open
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 56 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\__init__.py", line 37 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\__init__.py", line 1419 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\info.py", line 397 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\tool.py", line 185 in callback
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\ui\gui.py", line 368 in event_loop
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1057 in init
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1220 in 
  File "", line 88 in _run_code
  File "", line 198 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000009f0 (most recent call first):
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\qtpy\_utils.py", line 193 in _from_kwarg_name_to_kwarg_name_
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\open_command\dialog.py", line 312 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 28 in _file_open
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 56 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\__init__.py", line 37 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\__init__.py", line 1419 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\info.py", line 397 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\tool.py", line 185 in callback
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\ui\gui.py", line 368 in event_loop
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1057 in init
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1220 in 
  File "", line 88 in _run_code
  File "", line 198 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000009f0 (most recent call first):
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\qtpy\_utils.py", line 193 in _from_kwarg_name_to_kwarg_name_
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\open_command\dialog.py", line 312 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 28 in _file_open
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 56 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\__init__.py", line 37 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\__init__.py", line 1419 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\info.py", line 397 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\tool.py", line 185 in callback
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\ui\gui.py", line 368 in event_loop
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1057 in init
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py"Windows fatal exception: code 0x8001010e, line 

1220 in 
  File ""Windows fatal exception: code 0x8001010e

, line 88 in _run_code
  File "", line 198 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000009f0 (most recent call first):
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\qtpy\_utils.py", line 193 in _from_kwarg_name_to_kwarg_name_
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\open_command\dialog.py"Windows fatal exception: code 0x, line 312 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 28 in _file_open
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py"8001010e, line 56 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\__init__.py", line 37 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\__init__.py", line 1419 in run_provider
  File "

C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\info.py", line 397 in run_provider
  File Windows fatal exception: "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\tool.py", line 185 in callback
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\ui\gui.py", line 368 in event_loop
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py"code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0xWindows fatal exception: code 0x8001010e

, line Windows fatal exception: code 0x8001010e

1057 in init
8001010e  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py"Windows fatal exception: code 0x

8001010e

Windows fatal exception: code 0x8001010e

, line Windows fatal exception: code 0x8001010e

1220 in 
Windows fatal exception:   File ""Windows fatal exception: code 0x8001010ecode 0x8001010e



Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010eWindows fatal exception: code 0x8001010e



Windows fatal exception: code 0x8001010e

, line 88 in _run_code
  File ""Windows fatal exception: code 0x8001010e

, line 198 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000009f0 (most recent call first):
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\qtpy\_utils.py", line 193 in _from_kwarg_name_to_kwarg_name_
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\open_command\dialog.py", line 312 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 28 in _file_open
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 56 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\__init__.py", line 37 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\__init__.py", line 1419 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\info.py", line 397 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\tool.py", line 185 in callback
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\ui\gui.py", line 368 in event_loop
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1057 in init
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1220 in 
  File "", line 88 in _run_code
  File "", line 198 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000009f0 (most recent call first):
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\qtpy\_utils.py", line 193 in _from_kwarg_name_to_kwarg_name_
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\open_command\dialog.py", line 312 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 28 in _file_open
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 56 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\__init__.py", line 37 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\__init__.py", line 1419 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\info.py", line 397 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\tool.py", line 185 in callback
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\ui\gui.py", line 368 in event_loop
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1057 in init
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1220 in 
  File "", line 88 in _run_code
  File "", line 198 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000009f0 (most recent call first):
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\qtpy\_utils.py", line 193 in _from_kwarg_name_to_kwarg_name_
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\open_command\dialog.py", line 312 in show_open_file_dialog
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 28 in _file_open
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\providers.py", line 56 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\__init__.py", line 37 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\__init__.py", line 1419 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\toolshed\info.py", line 397 in run_provider
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\toolbar\tool.py", line 185 in callback
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\ui\gui.py", line 368 in event_loop
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1057 in init
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\__main__.py", line 1220 in 
  File "", line 88 in _run_code
  File "", line 198 in _run_module_as_main
Windows fatal exception: code 0x8001010e

Thread 0x000009f0 (most recent call first):
  File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\triggerset.py", line 248 in _activate
  File Windows fatal exception: access violation

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: Windows fatal exception: code 0x8001010e

code 0xWindows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

code 0xWindows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

8001010eWindows fatal exception: code 0x8001010e



Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010eWindows fatal exception: code 0x8001010e



Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0xWindows fatal exception: code 0xWindows fatal exception: code 0x8001010e

8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e8001010e



Windows fatal exception: Windows fatal exception: code 0x8001010e

code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0xWindows fatal exception: code 0x8001010e

8001010e

Windows fatal exception: code 0xWindows fatal exception: 8001010e

code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: Windows fatal exception: code 0x8001010e

code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

Windows fatal exception: code 0x8001010e

===== Log before crash start =====
UCSF ChimeraX version: 1.10rc202505160006 (2025-05-16)  
© 2016-2025 Regents of the University of California. All rights reserved.  

> open "C:\\\Users\\\briac\\\ChimeraX models\\\FBGS-C3b alphfold models.cxs"

Log from Mon May 19 22:43:01 2025UCSF ChimeraX version: 1.10rc202505160006
(2025-05-16)  
© 2016-2025 Regents of the University of California. All rights reserved.  

> open "C:\Users\briac\Downloads\FBG2-final version alphafold model.cxs"
> format session

Log from Mon May 19 14:03:57 2025

> hide sel surfaces

> select subtract #9.2

1 model selected  

> select add #9.2

5016 atoms, 643 residues, 1 model selected  

> select subtract #9.2

1 model selected  

> select add #9.1

7931 atoms, 991 residues, 1 model selected  

> hide sel surfaces

> color sel byhetero

> select add #9.3

10329 atoms, 1284 residues, 2 models selected  

> hbonds sel reveal true

3260 hydrogen bonds found  

> select subtract #9.3

7931 atoms, 991 residues, 3 models selected  

> select subtract #9.1

1 model selected  

> hide #!9 models

> hide #9.1 models

> hide #9.2 models

> hide #9.3 models

> open
> /Users/briaclemetais/Downloads/fold_2025_03_20_11_22_alpha_glycan_chain_2_from_c3bbb_fbxo6_c3b/fold_2025_03_20_11_22_alpha_glycan_chain_2_from_c3bbb_fbxo6_c3b_model_0.cif

Chain information for
fold_2025_03_20_11_22_alpha_glycan_chain_2_from_c3bbb_fbxo6_c3b_model_0.cif
#15  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Computing secondary structure  

> hide #15 models

> open
> /Users/briaclemetais/Downloads/fold_2025_03_20_11_22_alpha_glycan_chain_2_from_c3bbb_fbxo6_c3b/fold_2025_03_20_11_22_alpha_glycan_chain_2_from_c3bbb_fbxo6_c3b_model_1.cif

Chain information for
fold_2025_03_20_11_22_alpha_glycan_chain_2_from_c3bbb_fbxo6_c3b_model_1.cif
#16  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Computing secondary structure  

> hide #16 models

> open
> /Users/briaclemetais/Downloads/fold_2025_03_20_11_22_alpha_glycan_chain_2_from_c3bbb_fbxo6_c3b/fold_2025_03_20_11_22_alpha_glycan_chain_2_from_c3bbb_fbxo6_c3b_model_2.cif

Chain information for
fold_2025_03_20_11_22_alpha_glycan_chain_2_from_c3bbb_fbxo6_c3b_model_2.cif
#17  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Computing secondary structure  

> hide #17 models

> open
> /Users/briaclemetais/Downloads/fold_2025_03_20_11_22_alpha_glycan_chain_2_from_c3bbb_fbxo6_c3b/fold_2025_03_20_11_22_alpha_glycan_chain_2_from_c3bbb_fbxo6_c3b_model_3.cif

Chain information for
fold_2025_03_20_11_22_alpha_glycan_chain_2_from_c3bbb_fbxo6_c3b_model_3.cif
#18  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Computing secondary structure  

> hide #18 models

> open
> /Users/briaclemetais/Downloads/fold_2025_03_20_11_22_alpha_glycan_chain_2_from_c3bbb_fbxo6_c3b/fold_2025_03_20_11_22_alpha_glycan_chain_2_from_c3bbb_fbxo6_c3b_model_4.cif

Chain information for
fold_2025_03_20_11_22_alpha_glycan_chain_2_from_c3bbb_fbxo6_c3b_model_4.cif
#19  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Computing secondary structure  

> hide #19 models

> open
> /Users/briaclemetais/Downloads/fold_2025_03_20_11_22_alpha_glycan_chain_2_from_c3bbb_fbxo2_c3b/fold_2025_03_20_11_22_alpha_glycan_chain_2_from_c3bbb_fbxo2_c3b_model_0.cif

Chain information for
fold_2025_03_20_11_22_alpha_glycan_chain_2_from_c3bbb_fbxo2_c3b_model_0.cif
#20  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Computing secondary structure  

> color #20 bychain

> hide #20 models

> open
> /Users/briaclemetais/Downloads/fold_2025_03_20_11_22_alpha_glycan_chain_2_from_c3bbb_fbxo2_c3b/fold_2025_03_20_11_22_alpha_glycan_chain_2_from_c3bbb_fbxo2_c3b_model_1.cif

Chain information for
fold_2025_03_20_11_22_alpha_glycan_chain_2_from_c3bbb_fbxo2_c3b_model_1.cif
#21  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Computing secondary structure  

> hide #21 models

> open
> /Users/briaclemetais/Downloads/fold_2025_03_20_11_22_alpha_glycan_chain_2_from_c3bbb_fbxo2_c3b/fold_2025_03_20_11_22_alpha_glycan_chain_2_from_c3bbb_fbxo2_c3b_model_2.cif

Chain information for
fold_2025_03_20_11_22_alpha_glycan_chain_2_from_c3bbb_fbxo2_c3b_model_2.cif
#22  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Computing secondary structure  

> hide #22 models

> open
> /Users/briaclemetais/Downloads/fold_2025_03_20_11_22_alpha_glycan_chain_2_from_c3bbb_fbxo2_c3b/fold_2025_03_20_11_22_alpha_glycan_chain_2_from_c3bbb_fbxo2_c3b_model_3.cif

Chain information for
fold_2025_03_20_11_22_alpha_glycan_chain_2_from_c3bbb_fbxo2_c3b_model_3.cif
#23  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Computing secondary structure  

> hide #23 models

> open
> /Users/briaclemetais/Downloads/fold_2025_03_20_11_22_alpha_glycan_chain_2_from_c3bbb_fbxo2_c3b/fold_2025_03_20_11_22_alpha_glycan_chain_2_from_c3bbb_fbxo2_c3b_model_4.cif

Chain information for
fold_2025_03_20_11_22_alpha_glycan_chain_2_from_c3bbb_fbxo2_c3b_model_4.cif
#24  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Computing secondary structure  

> hide #24 models

> show #20 models

> select #24/C:1-991

7931 atoms, 8086 bonds, 991 residues, 1 model selected  

> select #20/C:1-991

7931 atoms, 8086 bonds, 991 residues, 1 model selected  

> show sel atoms

> color sel byhetero

> select #20/A:1-296

2352 atoms, 2415 bonds, 296 residues, 1 model selected  

> show sel atoms

> color sel byhetero

> hbonds sel reveal true

1096 hydrogen bonds found  

> hide #20 models

> open
> "/Users/briaclemetais/Downloads/fold_2025_03_20_11_22_alpha_glycan_chain_2_from_c3bbb_fbxo2_c3b
> 2/fold_2025_03_20_11_22_alpha_glycan_chain_2_from_c3bbb_fbxo2_c3b_model_0.cif"

Chain information for
fold_2025_03_20_11_22_alpha_glycan_chain_2_from_c3bbb_fbxo2_c3b_model_0.cif
#25  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Computing secondary structure  

> hide #25 models

> open
> /Users/briaclemetais/Downloads/fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo2_c3b/fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo2_c3b_model_0.cif

Chain information for
fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo2_c3b_model_0.cif
#26  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Computing secondary structure  

> hide #26 models

> open
> /Users/briaclemetais/Downloads/fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo2_c3b/fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo2_c3b_model_1.cif

Chain information for
fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo2_c3b_model_1.cif
#27  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Computing secondary structure  

> hide #27 models

> open
> /Users/briaclemetais/Downloads/fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo2_c3b/fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo2_c3b_full_data_1.json

Failed opening file
/Users/briaclemetais/Downloads/fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo2_c3b/fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo2_c3b_full_data_1.json:  
Opening an AlphaFold PAE file requires first opening the predicted atomic
model. Did not find an open atomic model from the same directory. If the
atomic model is already open choose it using menu  
  
Tools / Structure Prediction / AlphaFold Error Plot  
  
or use the open command structure option, for example  
  
open
/Users/briaclemetais/Downloads/fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo2_c3b/fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo2_c3b_full_data_1.json
structure #1  
  
If you are trying to open a JSON file that is not AlphaFold PAE data then you
need to specify the specific JSON format such as  
  
open mole_channels.json format mole  

> open
> /Users/briaclemetais/Downloads/fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo2_c3b/fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo2_c3b_model_2.cif

Chain information for
fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo2_c3b_model_2.cif
#28  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Computing secondary structure  

> hide #28 models

> open
> /Users/briaclemetais/Downloads/fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo2_c3b/fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo2_c3b_model_3.cif

Chain information for
fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo2_c3b_model_3.cif
#29  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Computing secondary structure  

> hide #29 models

> open
> /Users/briaclemetais/Downloads/fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo2_c3b/fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo2_c3b_model_4.cif

Chain information for
fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo2_c3b_model_4.cif
#30  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Computing secondary structure  

> hide #30 models

> open
> /Users/briaclemetais/Downloads/fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo6_c3b/fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo6_c3b_model_1.cif

Chain information for
fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo6_c3b_model_1.cif
#31  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Computing secondary structure  

> save "/Users/briaclemetais/Documents/ChimeraX files/C3b alphafold FBXO6
> complete glycan chain 3.cxs"

> hide #31 models

> open
> /Users/briaclemetais/Downloads/fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo6_c3b/fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo6_c3b_model_2.cif

Chain information for
fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo6_c3b_model_2.cif
#32  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Computing secondary structure  

> hide #32 models

> open
> /Users/briaclemetais/Downloads/fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo6_c3b/fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo6_c3b_model_3.cif

Chain information for
fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo6_c3b_model_3.cif
#33  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Computing secondary structure  

> save "/Users/briaclemetais/Documents/ChimeraX files/C3b alphafold FBXO6
> complete glycan chain 3- 3rd model.cxs"

> hide #33 models

> open
> /Users/briaclemetais/Downloads/fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo6_c3b/fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo6_c3b_model_4.cif

Chain information for
fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo6_c3b_model_4.cif
#34  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Computing secondary structure  

> save "/Users/briaclemetais/Documents/ChimeraX files/C3b alphafold FBXO6
> complete glycan chain 3- 4th model.cxs"

> open
> /Users/briaclemetais/Downloads/fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo6_c3b/fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo6_c3b_summary_confidences_4.json

Failed opening file
/Users/briaclemetais/Downloads/fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo6_c3b/fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo6_c3b_summary_confidences_4.json:  
Opening an AlphaFold PAE file requires first opening the predicted atomic
model. Did not find an open atomic model from the same directory. If the
atomic model is already open choose it using menu  
  
Tools / Structure Prediction / AlphaFold Error Plot  
  
or use the open command structure option, for example  
  
open
/Users/briaclemetais/Downloads/fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo6_c3b/fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo6_c3b_summary_confidences_4.json
structure #1  
  
If you are trying to open a JSON file that is not AlphaFold PAE data then you
need to specify the specific JSON format such as  
  
open mole_channels.json format mole  

> color #34 bychain

> open
> /Users/briaclemetais/Downloads/fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo6_c3b/fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo6_c3b_summary_confidences_3.json

Failed opening file
/Users/briaclemetais/Downloads/fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo6_c3b/fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo6_c3b_summary_confidences_3.json:  
Opening an AlphaFold PAE file requires first opening the predicted atomic
model. Did not find an open atomic model from the same directory. If the
atomic model is already open choose it using menu  
  
Tools / Structure Prediction / AlphaFold Error Plot  
  
or use the open command structure option, for example  
  
open
/Users/briaclemetais/Downloads/fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo6_c3b/fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo6_c3b_summary_confidences_3.json
structure #1  
  
If you are trying to open a JSON file that is not AlphaFold PAE data then you
need to specify the specific JSON format such as  
  
open mole_channels.json format mole  

> hide #34 models

> show #33 models

> color #33 bychain

> color #33 byhetero

> hbonds #33 reveal true

11998 hydrogen bonds found  

> Saltonly

Unknown command: Saltonly  

> Saltonly

Unknown command: Saltonly  

> Saltonly

Unknown command: Saltonly  

> Saltonly

Unknown command: Saltonly  

> Saltonly

Unknown command: Saltonly  

> Saltonly

Unknown command: Saltonly  

> Saltonly

Unknown command: Saltonly  

> Saltonly

Unknown command: Saltonly  

> Saltonly

Unknown command: Saltonly  

> Saltonly

Unknown command: Saltonly  

> Saltonly

Unknown command: Saltonly  

> Saltonly

Unknown command: Saltonly  

> Saltonly

Unknown command: Saltonly  

> Saltonly

Unknown command: Saltonly  

> Saltonly

Unknown command: Saltonly  

> Saltonly

Unknown command: Saltonly  

> Saltonly

Unknown command: Saltonly  

> Saltonly

Unknown command: Saltonly  

> Saltonly

Unknown command: Saltonly  

> Saltonly

Unknown command: Saltonly  

> Saltonly

Unknown command: Saltonly  

> Saltonly

Unknown command: Saltonly  

> Saltonly

Unknown command: Saltonly  

> Saltonly

Unknown command: Saltonly  

> Saltonly

Unknown command: Saltonly  

> Saltonly

Unknown command: Saltonly  

> Saltonly

Unknown command: Saltonly  

> Saltonly

Unknown command: Saltonly  

> Saltonly

Unknown command: Saltonly  

> Saltonly

Unknown command: Saltonly  

> Saltonly

Unknown command: Saltonly  

> Saltonly

Unknown command: Saltonly  

> Saltonly

Unknown command: Saltonly  

> Saltonly

Unknown command: Saltonly  

> Saltonly

Unknown command: Saltonly  

> show #33 surfaces

> hide #!33 models

> show #32 models

> hide #32 models

> show #34 models

> color #34 byhetero

> show #34 surfaces

> hide #!34 models

> show #!33 models

> hide #!33 surfaces

> open
> /Users/briaclemetais/Downloads/fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b/fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_0.cif

Chain information for
fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_0.cif
#35  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Computing secondary structure  

> hide #!33 models

> color #35 bychain

> open
> /Users/briaclemetais/Downloads/fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b/fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_1.cif

Chain information for
fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_1.cif
#36  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Computing secondary structure  

> hide #35 models

> color #36 bychain

> open
> /Users/briaclemetais/Downloads/fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b/fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_2.cif

Chain information for
fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_2.cif
#37  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Computing secondary structure  

> hide #36 models

> open
> /Users/briaclemetais/Downloads/fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b/fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_3.cif

Chain information for
fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_3.cif
#38  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Computing secondary structure  

> hide #37 models

> color #38 bychain

> open
> /Users/briaclemetais/Downloads/fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b/fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_4.cif

Chain information for
fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_4.cif
#39  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Computing secondary structure  

> hide #38 models

> color #39 bychain

> style #39 stick

Changed 15346 atom styles  

> select #39/A:1-283

2222 atoms, 2279 bonds, 283 residues, 1 model selected  

> hbonds sel reveal true

1917 hydrogen bonds found  

> color sel byhetero

> select #39/B:1-643

5016 atoms, 5117 bonds, 643 residues, 1 model selected  

> color sel byhetero

> select #39/C:1-991

7931 atoms, 8086 bonds, 991 residues, 1 model selected  

> color sel byhetero

> open
> /Users/briaclemetais/Downloads/fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b/fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_summary_confidences_4.json

Failed opening file
/Users/briaclemetais/Downloads/fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b/fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_summary_confidences_4.json:  
Opening an AlphaFold PAE file requires first opening the predicted atomic
model. Did not find an open atomic model from the same directory. If the
atomic model is already open choose it using menu  
  
Tools / Structure Prediction / AlphaFold Error Plot  
  
or use the open command structure option, for example  
  
open
/Users/briaclemetais/Downloads/fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b/fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_summary_confidences_4.json
structure #1  
  
If you are trying to open a JSON file that is not AlphaFold PAE data then you
need to specify the specific JSON format such as  
  
open mole_channels.json format mole  

> hide #39 models

> show #38 models

> hide #38 models

> show #37 models

> hide #37 models

> show #36 models

> hide #36 models

> show #36 models

> hide #36 models

> show #35 models

> hide #35 models

> show #!34 models

> hide #!34 models

> show #!33 models

> show #32 models

> hide #!33 models

> show #!33 models

> hide #32 models

> hide #!33 models

> show #!34 models

> save "/Users/briaclemetais/Documents/ChimeraX files/FBG2-final version
> alphafold model.cxs"

——— End of log from Mon May 19 14:03:57 2025 ———

> view name session-start

opened ChimeraX session  

> hide #!34 surfaces

> hide #2 models

> show #2 models

> show #!1 models

> hide #!1 models

> show #!1 models

> hide #!1 models

> mlp #!34

Map values for surface
"fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo6_c3b_model_4.cif_A
SES surface": minimum -26.17, mean -4.163, maximum 23.4  
Map values for surface
"fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo6_c3b_model_4.cif_B
SES surface": minimum -28.54, mean -5.415, maximum 23.79  
Map values for surface
"fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo6_c3b_model_4.cif_C
SES surface": minimum -30.51, mean -5.323, maximum 24.86  
To also show corresponding color key, enter the above mlp command and add key
true  

> hide #2 models

> show #!34 surfaces

> hide #!34 surfaces

> show #39 models

> hide #39 models

> hide #!34 models

> show #39 models

> show sel surfaces

> color sel bychain

> show sel surfaces

> select #3/A

13111 atoms, 13376 bonds, 1663 residues, 1 model selected  

> select #1/A

4907 atoms, 5005 bonds, 2 pseudobonds, 630 residues, 2 models selected  

> show #!39 surfaces

> mlp #!39

Map values for surface
"fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_4.cif_A
SES surface": minimum -25.92, mean -4.556, maximum 21.58  
Map values for surface
"fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_4.cif_B
SES surface": minimum -27.38, mean -5.37, maximum 23.83  
Map values for surface
"fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_4.cif_C
SES surface": minimum -29.91, mean -5.247, maximum 24.18  
To also show corresponding color key, enter the above mlp command and add key
true  

> hide #!39 surfaces

> select #1/A

4907 atoms, 5005 bonds, 2 pseudobonds, 630 residues, 2 models selected  

> show #!39 atoms

> color #!39 byhetero

> hbonds #!39 reveal true

13674 hydrogen bonds found  

> mlp #!39

Map values for surface
"fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_4.cif_A
SES surface": minimum -25.92, mean -4.556, maximum 21.58  
Map values for surface
"fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_4.cif_B
SES surface": minimum -27.38, mean -5.37, maximum 23.83  
Map values for surface
"fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_4.cif_C
SES surface": minimum -29.91, mean -5.247, maximum 24.18  
To also show corresponding color key, enter the above mlp command and add key
true  

> hide #!39 surfaces

> mlp #!39

Map values for surface
"fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_4.cif_A
SES surface": minimum -25.92, mean -4.556, maximum 21.58  
Map values for surface
"fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_4.cif_B
SES surface": minimum -27.38, mean -5.37, maximum 23.83  
Map values for surface
"fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_4.cif_C
SES surface": minimum -29.91, mean -5.247, maximum 24.18  
To also show corresponding color key, enter the above mlp command and add key
true  

> select #3/A

13111 atoms, 13376 bonds, 1663 residues, 1 model selected  

> hide #!39 surfaces

> select #1/A

4907 atoms, 5005 bonds, 2 pseudobonds, 630 residues, 2 models selected  

> mlp #!39

Map values for surface
"fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_4.cif_A
SES surface": minimum -25.92, mean -4.556, maximum 21.58  
Map values for surface
"fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_4.cif_B
SES surface": minimum -27.38, mean -5.37, maximum 23.83  
Map values for surface
"fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_4.cif_C
SES surface": minimum -29.91, mean -5.247, maximum 24.18  
To also show corresponding color key, enter the above mlp command and add key
true  

> volume hide

No volumes specified  

> show #4 models

> hide #!39 models

> color #4 bychain

> ui autostart false "Model Panel"

> ui windowfill toggle

[Repeated 1 time(s)]

> view #4 clip false

> hide #4 models

> select add #4

20350 atoms, 20779 bonds, 2 pseudobonds, 2572 residues, 3 models selected  

> show #4 models

> log metadata #4

The model has no metadata

> log chains #4

Chain information for
fold_2025_03_20_11_22_glycan_chain_from_c3bbb_fbxo2_c3b_model_0.cif #4  
---  
Chain | Description  
A | .  
B | .  
C | .  
  

> hide #4 models

> show #!39 models

> hide #!39 models

> show #!39 models

> hide #!39 models

> show #38 models

> hide #38 models

> show #37 models

> hide #37 models

> show #36 models

> hide #36 models

> show #35 models

> hide #35 models

> show #!34 models

> hide #!34 models

> show #!33 models

> mlp #!33

Map values for surface
"fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo6_c3b_model_3.cif_A
SES surface": minimum -25.85, mean -4.212, maximum 23.8  
Map values for surface
"fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo6_c3b_model_3.cif_B
SES surface": minimum -27.5, mean -5.418, maximum 23.67  
Map values for surface
"fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo6_c3b_model_3.cif_C
SES surface": minimum -30.14, mean -5.263, maximum 24.13  
To also show corresponding color key, enter the above mlp command and add key
true  

> hide #!33 surfaces

> mlp #!33

Map values for surface
"fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo6_c3b_model_3.cif_A
SES surface": minimum -25.85, mean -4.212, maximum 23.8  
Map values for surface
"fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo6_c3b_model_3.cif_B
SES surface": minimum -27.5, mean -5.418, maximum 23.67  
Map values for surface
"fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo6_c3b_model_3.cif_C
SES surface": minimum -30.14, mean -5.263, maximum 24.13  
To also show corresponding color key, enter the above mlp command and add key
true  

> hide #!33 surfaces

> mlp #!33

Map values for surface
"fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo6_c3b_model_3.cif_A
SES surface": minimum -25.85, mean -4.212, maximum 23.8  
Map values for surface
"fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo6_c3b_model_3.cif_B
SES surface": minimum -27.5, mean -5.418, maximum 23.67  
Map values for surface
"fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo6_c3b_model_3.cif_C
SES surface": minimum -30.14, mean -5.263, maximum 24.13  
To also show corresponding color key, enter the above mlp command and add key
true  

> hide #!33 surfaces

> show #!33 atoms

> hide #!33 models

> show #32 models

> color #32 bychain

> show #32 atoms

> color #32 byhetero

> mlp #32

Map values for surface
"fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo6_c3b_model_2.cif_A
SES surface": minimum -26.06, mean -4.172, maximum 24.19  
Map values for surface
"fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo6_c3b_model_2.cif_B
SES surface": minimum -27.47, mean -5.44, maximum 23.98  
Map values for surface
"fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo6_c3b_model_2.cif_C
SES surface": minimum -31.92, mean -5.326, maximum 23.56  
To also show corresponding color key, enter the above mlp command and add key
true  

> hide #!32 models

> show #31 models

> color #31 bychain

> hide #31 models

> show #30 models

> color #30 bychain

> hide #30 models

> show #!39 models

> select #4/A:1-296

2352 atoms, 2415 bonds, 296 residues, 1 model selected  

> hide #!39 surfaces

> log chains

Chain information for
fold_2025_03_20_11_22_glycan_chain_complete_fbxo6_c3b_model_1.cif #10  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Chain information for 2i07.pdb #1  
---  
Chain | Description | UniProt  
A | complement C3B | CO3_HUMAN 1-645  
B | complement C3B | CO3_HUMAN 727-1641  
  
Chain information for AF-P01027-F1-model_v4.pdb #3  
---  
Chain | Description | UniProt  
A | complement C3 | CO3_MOUSE 1-1663  
  
Chain information for
fold_2025_03_20_11_22_glycan_chain_from_c3bbb_fbxo2_c3b_model_0.cif #4  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Chain information for
fold_2025_03_20_11_22_glycan_chain_from_c3bbb_fbxo2_c3b_model_1.cif #5  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Chain information for
fold_2025_03_20_11_22_glycan_chain_from_c3bbb_fbxo2_c3b_model_2.cif #6  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Chain information for
fold_2025_03_20_11_22_glycan_chain_from_c3bbb_fbxo2_c3b_model_3.cif #7  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Chain information for
fold_2025_03_20_11_22_glycan_chain_from_c3bbb_fbxo2_c3b_model_4.cif #8  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Chain information for
fold_2025_03_20_11_22_glycan_chain_from_c3bbb_fbxo6_c3b_model_0.cif #9  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Chain information for
fold_2025_03_20_11_22_glycan_chain_from_c3bbb_fbxo6_c3b_model_1.cif #11  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Chain information for
fold_2025_03_20_11_22_glycan_chain_from_c3bbb_fbxo6_c3b_model_2.cif #12  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Chain information for
fold_2025_03_20_11_22_glycan_chain_from_c3bbb_fbxo6_c3b_model_3.cif #13  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Chain information for
fold_2025_03_20_11_22_glycan_chain_from_c3bbb_fbxo6_c3b_model_4.cif #14  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Chain information for
fold_2025_03_20_11_22_alpha_glycan_chain_2_from_c3bbb_fbxo6_c3b_model_0.cif
#15  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Chain information for
fold_2025_03_20_11_22_alpha_glycan_chain_2_from_c3bbb_fbxo6_c3b_model_1.cif
#16  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Chain information for
fold_2025_03_20_11_22_alpha_glycan_chain_2_from_c3bbb_fbxo6_c3b_model_2.cif
#17  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Chain information for
fold_2025_03_20_11_22_alpha_glycan_chain_2_from_c3bbb_fbxo6_c3b_model_3.cif
#18  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Chain information for
fold_2025_03_20_11_22_alpha_glycan_chain_2_from_c3bbb_fbxo6_c3b_model_4.cif
#19  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Chain information for
fold_2025_03_20_11_22_alpha_glycan_chain_2_from_c3bbb_fbxo2_c3b_model_0.cif
#20  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Chain information for
fold_2025_03_20_11_22_alpha_glycan_chain_2_from_c3bbb_fbxo2_c3b_model_1.cif
#21  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Chain information for
fold_2025_03_20_11_22_alpha_glycan_chain_2_from_c3bbb_fbxo2_c3b_model_2.cif
#22  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Chain information for
fold_2025_03_20_11_22_alpha_glycan_chain_2_from_c3bbb_fbxo2_c3b_model_3.cif
#23  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Chain information for
fold_2025_03_20_11_22_alpha_glycan_chain_2_from_c3bbb_fbxo2_c3b_model_4.cif
#24  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Chain information for
fold_2025_03_20_11_22_alpha_glycan_chain_2_from_c3bbb_fbxo2_c3b_model_0.cif
#25  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Chain information for
fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo2_c3b_model_0.cif
#26  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Chain information for
fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo2_c3b_model_1.cif
#27  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Chain information for
fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo2_c3b_model_2.cif
#28  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Chain information for
fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo2_c3b_model_3.cif
#29  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Chain information for
fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo2_c3b_model_4.cif
#30  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Chain information for
fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo6_c3b_model_1.cif
#31  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Chain information for
fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo6_c3b_model_2.cif
#32  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Chain information for
fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo6_c3b_model_3.cif
#33  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Chain information for
fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo6_c3b_model_4.cif
#34  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Chain information for
fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_0.cif
#35  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Chain information for
fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_1.cif
#36  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Chain information for
fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_2.cif
#37  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Chain information for
fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_3.cif
#38  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Chain information for
fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_4.cif
#39  
---  
Chain | Description  
A | .  
B | .  
C | .  
  

> select #39/B:1-643

5016 atoms, 5117 bonds, 520 pseudobonds, 643 residues, 2 models selected  

> select #39/A:1-283

2222 atoms, 2279 bonds, 227 pseudobonds, 283 residues, 2 models selected  

> mlp sel

Map values for surface
"fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_4.cif_A
SES surface": minimum -25.92, mean -4.556, maximum 21.58  
To also show corresponding color key, enter the above mlp command and add key
true  

> select #39/A:1-283

2222 atoms, 2279 bonds, 227 pseudobonds, 283 residues, 2 models selected  

> select #39/B:1-643

5016 atoms, 5117 bonds, 520 pseudobonds, 643 residues, 2 models selected  

> select #39/C:1-991

7931 atoms, 8086 bonds, 856 pseudobonds, 991 residues, 2 models selected  

> mlp sel

Map values for surface
"fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_4.cif_C
SES surface": minimum -29.91, mean -5.247, maximum 24.18  
To also show corresponding color key, enter the above mlp command and add key
true  

> ui mousemode right distance

> show sel surfaces

> select #1/A#1/B

12118 atoms, 12369 bonds, 4 pseudobonds, 1532 residues, 2 models selected  

> show #!39 surfaces

> pbonds

Unknown command: pbonds  

> hide #!39 surfaces

> ui mousemode right distance

> distance #39/A:212@ND2 #39/A:263@CZ2

Distance between
fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_4.cif
#39/A ASN 212 ND2 and TRP 263 CZ2: 48.107Å  

> distance #39/E:2@C3 #39/A:263@CZ2

Distance between
fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_4.cif
#39/E NAG 2 C3 and /A TRP 263 CZ2: 3.833Å  

> distance #39/A:262@CE2 #39/C:272@CG2

Distance between
fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_4.cif
#39/A PHE 262 CE2 and /C VAL 272 CG2: 4.609Å  

> select down

12118 atoms, 12369 bonds, 4 pseudobonds, 1532 residues, 2 models selected  

> select down

12118 atoms, 12369 bonds, 4 pseudobonds, 1532 residues, 2 models selected  

> select down

12118 atoms, 12369 bonds, 4 pseudobonds, 1532 residues, 2 models selected  

> select down

12118 atoms, 12369 bonds, 4 pseudobonds, 1532 residues, 2 models selected  

> select down

12118 atoms, 12369 bonds, 4 pseudobonds, 1532 residues, 2 models selected  

> ~distance #39/A:212@ND2 #39/A:263@CZ2

> distance #39/E:7@C6 #39/A:229@CH2

Distance between
fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_4.cif
#39/E MAN 7 C6 and /A TRP 229 CH2: 3.659Å  

> distance #39/A:267@OH #39/E:4@O3

Distance between
fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_4.cif
#39/A TYR 267 OH and /E MAN 4 O3: 3.910Å  

> distance #39/A:262@CD1 #39/C:309@CD2

Distance between
fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_4.cif
#39/A PHE 262 CD1 and /C LEU 309 CD2: 4.023Å  

> distance #39/A:262@CD1 #39/C:647@CD2

Distance between
fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_4.cif
#39/A PHE 262 CD1 and /C LEU 647 CD2: 5.689Å  

> select #39/A:1-283

2222 atoms, 2279 bonds, 227 pseudobonds, 283 residues, 2 models selected  

> hbonds sel reveal true

1916 hydrogen bonds found  

> mlp sel

Map values for surface
"fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_4.cif_A
SES surface": minimum -25.92, mean -4.556, maximum 21.58  
To also show corresponding color key, enter the above mlp command and add key
true  

> hide sel surfaces

> distance #39/A:128@SD #39/C:578@CG

Distance between
fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_4.cif
#39/A MET 128 SD and /C PRO 578 CG: 5.639Å  

> distance #39/A:129@CG2 #39/C:318@CE

Distance between
fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_4.cif
#39/A VAL 129 CG2 and /C MET 318 CE: 4.632Å  

> mlp sel

Map values for surface
"fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_4.cif_A
SES surface": minimum -25.92, mean -4.556, maximum 21.58  
To also show corresponding color key, enter the above mlp command and add key
true  

> select #39/B:1-643

5016 atoms, 5117 bonds, 643 residues, 1 model selected  

> mlp sel

Map values for surface
"fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_4.cif_B
SES surface": minimum -27.38, mean -5.37, maximum 23.83  
To also show corresponding color key, enter the above mlp command and add key
true  

> hide sel surfaces

> select #39/A:1-283

2222 atoms, 2279 bonds, 227 pseudobonds, 283 residues, 2 models selected  

> select #39/C:1-991

7931 atoms, 8086 bonds, 991 residues, 1 model selected  

> select #39/A:1-283

2222 atoms, 2279 bonds, 227 pseudobonds, 283 residues, 2 models selected  

> hide sel surfaces

> distance #39/A:160@NE1 #39/C:647@CB

Distance between
fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_4.cif
#39/A TRP 160 NE1 and /C LEU 647 CB: 14.949Å  

> ~distance #39/A:160@NE1 #39/C:647@CB

> distance #39/B:151@CD1 #39/A:262@CB

Distance between
fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_4.cif
#39/B ILE 151 CD1 and /A PHE 262 CB: 4.759Å  

> mlp sel

Map values for surface
"fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_4.cif_A
SES surface": minimum -25.92, mean -4.556, maximum 21.58  
To also show corresponding color key, enter the above mlp command and add key
true  

> hide sel surfaces

> distance #39/A:158@CZ #39/C:647@CD1

Distance between
fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_4.cif
#39/A PHE 158 CZ and /C LEU 647 CD1: 5.494Å  

> mlp sel

Map values for surface
"fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_4.cif_A
SES surface": minimum -25.92, mean -4.556, maximum 21.58  
To also show corresponding color key, enter the above mlp command and add key
true  

> select #39/B:1-643

5016 atoms, 5117 bonds, 643 residues, 1 model selected  

> color sel bychain

> select #39/A:1-283

2222 atoms, 2279 bonds, 227 pseudobonds, 283 residues, 2 models selected  

> select #39/C:1-991

7931 atoms, 8086 bonds, 991 residues, 1 model selected  

> mlp sel

Map values for surface
"fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_4.cif_C
SES surface": minimum -29.91, mean -5.247, maximum 24.18  
To also show corresponding color key, enter the above mlp command and add key
true  

> hide sel surfaces

> select #39/A:1-283

2222 atoms, 2279 bonds, 227 pseudobonds, 283 residues, 2 models selected  

> hide sel surfaces

> distance #39/A:201@SD #39/A:201@CE

Distance between
fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_4.cif
#39/A MET 201 SD and CE: 1.800Å  

> distance #39/C:272@CG1 #39/C:272@CB

Distance between
fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_4.cif
#39/C VAL 272 CG1 and CB: 1.528Å  

> ~distance #39/C:272@CG1 #39/C:272@CB

> ~distance #39/A:201@SD #39/A:201@CE

> distance #39/C:272@CG1 #39/A:201@CE

Distance between
fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_4.cif
#39/C VAL 272 CG1 and /A MET 201 CE: 3.735Å  

> mlp sel

Map values for surface
"fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_4.cif_A
SES surface": minimum -25.92, mean -4.556, maximum 21.58  
To also show corresponding color key, enter the above mlp command and add key
true  

> select #39/C:1-991

7931 atoms, 8086 bonds, 991 residues, 1 model selected  

> mlp sel

Map values for surface
"fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_4.cif_C
SES surface": minimum -29.91, mean -5.247, maximum 24.18  
To also show corresponding color key, enter the above mlp command and add key
true  

> distance #39/C:280@CD2 #39/C:575@CG

Distance between
fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_4.cif
#39/C LEU 280 CD2 and ASP 575 CG: 19.594Å  

> ~distance #39/C:280@CD2 #39/C:575@CG

> hide sel surfaces

> mlp sel

Map values for surface
"fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_4.cif_C
SES surface": minimum -29.91, mean -5.247, maximum 24.18  
To also show corresponding color key, enter the above mlp command and add key
true  

> hide sel surfaces

> select #39/A:1-283

2222 atoms, 2279 bonds, 227 pseudobonds, 283 residues, 2 models selected  

> hide sel surfaces

> ui mousemode right distance

> ui mousemode right select

No map chosen to save  

> select clear

> save "C:/Users/briac/ChimeraX models/FBXO27/FBG5-C3b-hydrophobic
> interactions distance.pdb" displayedOnly true

Cannot save 'C:/Users/briac/ChimeraX models/FBXO27/FBG5-C3b-hydrophobic
interactions distance.pdb': Unable to open file 'C:/Users/briac/ChimeraX
models/FBXO27/FBG5-C3b-hydrophobic interactions distance.pdb' for writing  

> save "C:/Users/briac/ChimeraX models/FBGS-C3b alphfold models.cxs"

——— End of log from Mon May 19 22:43:01 2025 ———

> view name session-start

opened ChimeraX session  

> ui windowfill toggle

> color #!39 bychain

> mlp #!39

Map values for surface
"fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_4.cif_A
SES surface": minimum -25.92, mean -4.556, maximum 21.58  
Map values for surface
"fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_4.cif_B
SES surface": minimum -27.38, mean -5.37, maximum 23.83  
Map values for surface
"fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_4.cif_C
SES surface": minimum -29.91, mean -5.247, maximum 24.18  
To also show corresponding color key, enter the above mlp command and add key
true  

> hide #!39 surfaces

> hbonds #!39 reveal true

13675 hydrogen bonds found  

> color #!39 byhetero

> interfaces #!39 & ~solvent

3 buried areas: C B 5435, C A 938, A E 353  

> ui dockable false "Chain Contacts"


===== Log before crash end =====

Log:
UCSF ChimeraX version: 1.10rc202505160006 (2025-05-16)  
© 2016-2025 Regents of the University of California. All rights reserved.  

> open "C:\\\Users\\\briac\\\ChimeraX models\\\FBGS-C3b alphfold models.cxs"

Log from Mon May 19 22:43:01 2025UCSF ChimeraX version: 1.10rc202505160006
(2025-05-16)  
© 2016-2025 Regents of the University of California. All rights reserved.  

> open "C:\Users\briac\Downloads\FBG2-final version alphafold model.cxs"
> format session

Log from Mon May 19 14:03:57 2025

> hide sel surfaces

> select subtract #9.2

1 model selected  

> select add #9.2

5016 atoms, 643 residues, 1 model selected  

> select subtract #9.2

1 model selected  

> select add #9.1

7931 atoms, 991 residues, 1 model selected  

> hide sel surfaces

> color sel byhetero

> select add #9.3

10329 atoms, 1284 residues, 2 models selected  

> hbonds sel reveal true

3260 hydrogen bonds found  

> select subtract #9.3

7931 atoms, 991 residues, 3 models selected  

> select subtract #9.1

1 model selected  

> hide #!9 models

> hide #9.1 models

> hide #9.2 models

> hide #9.3 models

> open
> /Users/briaclemetais/Downloads/fold_2025_03_20_11_22_alpha_glycan_chain_2_from_c3bbb_fbxo6_c3b/fold_2025_03_20_11_22_alpha_glycan_chain_2_from_c3bbb_fbxo6_c3b_model_0.cif

Chain information for
fold_2025_03_20_11_22_alpha_glycan_chain_2_from_c3bbb_fbxo6_c3b_model_0.cif
#15  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Computing secondary structure  

> hide #15 models

> open
> /Users/briaclemetais/Downloads/fold_2025_03_20_11_22_alpha_glycan_chain_2_from_c3bbb_fbxo6_c3b/fold_2025_03_20_11_22_alpha_glycan_chain_2_from_c3bbb_fbxo6_c3b_model_1.cif

Chain information for
fold_2025_03_20_11_22_alpha_glycan_chain_2_from_c3bbb_fbxo6_c3b_model_1.cif
#16  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Computing secondary structure  

> hide #16 models

> open
> /Users/briaclemetais/Downloads/fold_2025_03_20_11_22_alpha_glycan_chain_2_from_c3bbb_fbxo6_c3b/fold_2025_03_20_11_22_alpha_glycan_chain_2_from_c3bbb_fbxo6_c3b_model_2.cif

Chain information for
fold_2025_03_20_11_22_alpha_glycan_chain_2_from_c3bbb_fbxo6_c3b_model_2.cif
#17  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Computing secondary structure  

> hide #17 models

> open
> /Users/briaclemetais/Downloads/fold_2025_03_20_11_22_alpha_glycan_chain_2_from_c3bbb_fbxo6_c3b/fold_2025_03_20_11_22_alpha_glycan_chain_2_from_c3bbb_fbxo6_c3b_model_3.cif

Chain information for
fold_2025_03_20_11_22_alpha_glycan_chain_2_from_c3bbb_fbxo6_c3b_model_3.cif
#18  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Computing secondary structure  

> hide #18 models

> open
> /Users/briaclemetais/Downloads/fold_2025_03_20_11_22_alpha_glycan_chain_2_from_c3bbb_fbxo6_c3b/fold_2025_03_20_11_22_alpha_glycan_chain_2_from_c3bbb_fbxo6_c3b_model_4.cif

Chain information for
fold_2025_03_20_11_22_alpha_glycan_chain_2_from_c3bbb_fbxo6_c3b_model_4.cif
#19  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Computing secondary structure  

> hide #19 models

> open
> /Users/briaclemetais/Downloads/fold_2025_03_20_11_22_alpha_glycan_chain_2_from_c3bbb_fbxo2_c3b/fold_2025_03_20_11_22_alpha_glycan_chain_2_from_c3bbb_fbxo2_c3b_model_0.cif

Chain information for
fold_2025_03_20_11_22_alpha_glycan_chain_2_from_c3bbb_fbxo2_c3b_model_0.cif
#20  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Computing secondary structure  

> color #20 bychain

> hide #20 models

> open
> /Users/briaclemetais/Downloads/fold_2025_03_20_11_22_alpha_glycan_chain_2_from_c3bbb_fbxo2_c3b/fold_2025_03_20_11_22_alpha_glycan_chain_2_from_c3bbb_fbxo2_c3b_model_1.cif

Chain information for
fold_2025_03_20_11_22_alpha_glycan_chain_2_from_c3bbb_fbxo2_c3b_model_1.cif
#21  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Computing secondary structure  

> hide #21 models

> open
> /Users/briaclemetais/Downloads/fold_2025_03_20_11_22_alpha_glycan_chain_2_from_c3bbb_fbxo2_c3b/fold_2025_03_20_11_22_alpha_glycan_chain_2_from_c3bbb_fbxo2_c3b_model_2.cif

Chain information for
fold_2025_03_20_11_22_alpha_glycan_chain_2_from_c3bbb_fbxo2_c3b_model_2.cif
#22  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Computing secondary structure  

> hide #22 models

> open
> /Users/briaclemetais/Downloads/fold_2025_03_20_11_22_alpha_glycan_chain_2_from_c3bbb_fbxo2_c3b/fold_2025_03_20_11_22_alpha_glycan_chain_2_from_c3bbb_fbxo2_c3b_model_3.cif

Chain information for
fold_2025_03_20_11_22_alpha_glycan_chain_2_from_c3bbb_fbxo2_c3b_model_3.cif
#23  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Computing secondary structure  

> hide #23 models

> open
> /Users/briaclemetais/Downloads/fold_2025_03_20_11_22_alpha_glycan_chain_2_from_c3bbb_fbxo2_c3b/fold_2025_03_20_11_22_alpha_glycan_chain_2_from_c3bbb_fbxo2_c3b_model_4.cif

Chain information for
fold_2025_03_20_11_22_alpha_glycan_chain_2_from_c3bbb_fbxo2_c3b_model_4.cif
#24  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Computing secondary structure  

> hide #24 models

> show #20 models

> select #24/C:1-991

7931 atoms, 8086 bonds, 991 residues, 1 model selected  

> select #20/C:1-991

7931 atoms, 8086 bonds, 991 residues, 1 model selected  

> show sel atoms

> color sel byhetero

> select #20/A:1-296

2352 atoms, 2415 bonds, 296 residues, 1 model selected  

> show sel atoms

> color sel byhetero

> hbonds sel reveal true

1096 hydrogen bonds found  

> hide #20 models

> open
> "/Users/briaclemetais/Downloads/fold_2025_03_20_11_22_alpha_glycan_chain_2_from_c3bbb_fbxo2_c3b
> 2/fold_2025_03_20_11_22_alpha_glycan_chain_2_from_c3bbb_fbxo2_c3b_model_0.cif"

Chain information for
fold_2025_03_20_11_22_alpha_glycan_chain_2_from_c3bbb_fbxo2_c3b_model_0.cif
#25  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Computing secondary structure  

> hide #25 models

> open
> /Users/briaclemetais/Downloads/fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo2_c3b/fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo2_c3b_model_0.cif

Chain information for
fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo2_c3b_model_0.cif
#26  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Computing secondary structure  

> hide #26 models

> open
> /Users/briaclemetais/Downloads/fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo2_c3b/fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo2_c3b_model_1.cif

Chain information for
fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo2_c3b_model_1.cif
#27  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Computing secondary structure  

> hide #27 models

> open
> /Users/briaclemetais/Downloads/fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo2_c3b/fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo2_c3b_full_data_1.json

Failed opening file
/Users/briaclemetais/Downloads/fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo2_c3b/fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo2_c3b_full_data_1.json:  
Opening an AlphaFold PAE file requires first opening the predicted atomic
model. Did not find an open atomic model from the same directory. If the
atomic model is already open choose it using menu  
  
Tools / Structure Prediction / AlphaFold Error Plot  
  
or use the open command structure option, for example  
  
open
/Users/briaclemetais/Downloads/fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo2_c3b/fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo2_c3b_full_data_1.json
structure #1  
  
If you are trying to open a JSON file that is not AlphaFold PAE data then you
need to specify the specific JSON format such as  
  
open mole_channels.json format mole  

> open
> /Users/briaclemetais/Downloads/fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo2_c3b/fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo2_c3b_model_2.cif

Chain information for
fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo2_c3b_model_2.cif
#28  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Computing secondary structure  

> hide #28 models

> open
> /Users/briaclemetais/Downloads/fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo2_c3b/fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo2_c3b_model_3.cif

Chain information for
fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo2_c3b_model_3.cif
#29  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Computing secondary structure  

> hide #29 models

> open
> /Users/briaclemetais/Downloads/fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo2_c3b/fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo2_c3b_model_4.cif

Chain information for
fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo2_c3b_model_4.cif
#30  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Computing secondary structure  

> hide #30 models

> open
> /Users/briaclemetais/Downloads/fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo6_c3b/fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo6_c3b_model_1.cif

Chain information for
fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo6_c3b_model_1.cif
#31  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Computing secondary structure  

> save "/Users/briaclemetais/Documents/ChimeraX files/C3b alphafold FBXO6
> complete glycan chain 3.cxs"

> hide #31 models

> open
> /Users/briaclemetais/Downloads/fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo6_c3b/fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo6_c3b_model_2.cif

Chain information for
fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo6_c3b_model_2.cif
#32  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Computing secondary structure  

> hide #32 models

> open
> /Users/briaclemetais/Downloads/fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo6_c3b/fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo6_c3b_model_3.cif

Chain information for
fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo6_c3b_model_3.cif
#33  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Computing secondary structure  

> save "/Users/briaclemetais/Documents/ChimeraX files/C3b alphafold FBXO6
> complete glycan chain 3- 3rd model.cxs"

> hide #33 models

> open
> /Users/briaclemetais/Downloads/fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo6_c3b/fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo6_c3b_model_4.cif

Chain information for
fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo6_c3b_model_4.cif
#34  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Computing secondary structure  

> save "/Users/briaclemetais/Documents/ChimeraX files/C3b alphafold FBXO6
> complete glycan chain 3- 4th model.cxs"

> open
> /Users/briaclemetais/Downloads/fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo6_c3b/fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo6_c3b_summary_confidences_4.json

Failed opening file
/Users/briaclemetais/Downloads/fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo6_c3b/fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo6_c3b_summary_confidences_4.json:  
Opening an AlphaFold PAE file requires first opening the predicted atomic
model. Did not find an open atomic model from the same directory. If the
atomic model is already open choose it using menu  
  
Tools / Structure Prediction / AlphaFold Error Plot  
  
or use the open command structure option, for example  
  
open
/Users/briaclemetais/Downloads/fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo6_c3b/fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo6_c3b_summary_confidences_4.json
structure #1  
  
If you are trying to open a JSON file that is not AlphaFold PAE data then you
need to specify the specific JSON format such as  
  
open mole_channels.json format mole  

> color #34 bychain

> open
> /Users/briaclemetais/Downloads/fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo6_c3b/fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo6_c3b_summary_confidences_3.json

Failed opening file
/Users/briaclemetais/Downloads/fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo6_c3b/fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo6_c3b_summary_confidences_3.json:  
Opening an AlphaFold PAE file requires first opening the predicted atomic
model. Did not find an open atomic model from the same directory. If the
atomic model is already open choose it using menu  
  
Tools / Structure Prediction / AlphaFold Error Plot  
  
or use the open command structure option, for example  
  
open
/Users/briaclemetais/Downloads/fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo6_c3b/fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo6_c3b_summary_confidences_3.json
structure #1  
  
If you are trying to open a JSON file that is not AlphaFold PAE data then you
need to specify the specific JSON format such as  
  
open mole_channels.json format mole  

> hide #34 models

> show #33 models

> color #33 bychain

> color #33 byhetero

> hbonds #33 reveal true

11998 hydrogen bonds found  

> Saltonly

Unknown command: Saltonly  

> Saltonly

Unknown command: Saltonly  

> Saltonly

Unknown command: Saltonly  

> Saltonly

Unknown command: Saltonly  

> Saltonly

Unknown command: Saltonly  

> Saltonly

Unknown command: Saltonly  

> Saltonly

Unknown command: Saltonly  

> Saltonly

Unknown command: Saltonly  

> Saltonly

Unknown command: Saltonly  

> Saltonly

Unknown command: Saltonly  

> Saltonly

Unknown command: Saltonly  

> Saltonly

Unknown command: Saltonly  

> Saltonly

Unknown command: Saltonly  

> Saltonly

Unknown command: Saltonly  

> Saltonly

Unknown command: Saltonly  

> Saltonly

Unknown command: Saltonly  

> Saltonly

Unknown command: Saltonly  

> Saltonly

Unknown command: Saltonly  

> Saltonly

Unknown command: Saltonly  

> Saltonly

Unknown command: Saltonly  

> Saltonly

Unknown command: Saltonly  

> Saltonly

Unknown command: Saltonly  

> Saltonly

Unknown command: Saltonly  

> Saltonly

Unknown command: Saltonly  

> Saltonly

Unknown command: Saltonly  

> Saltonly

Unknown command: Saltonly  

> Saltonly

Unknown command: Saltonly  

> Saltonly

Unknown command: Saltonly  

> Saltonly

Unknown command: Saltonly  

> Saltonly

Unknown command: Saltonly  

> Saltonly

Unknown command: Saltonly  

> Saltonly

Unknown command: Saltonly  

> Saltonly

Unknown command: Saltonly  

> Saltonly

Unknown command: Saltonly  

> Saltonly

Unknown command: Saltonly  

> show #33 surfaces

> hide #!33 models

> show #32 models

> hide #32 models

> show #34 models

> color #34 byhetero

> show #34 surfaces

> hide #!34 models

> show #!33 models

> hide #!33 surfaces

> open
> /Users/briaclemetais/Downloads/fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b/fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_0.cif

Chain information for
fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_0.cif
#35  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Computing secondary structure  

> hide #!33 models

> color #35 bychain

> open
> /Users/briaclemetais/Downloads/fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b/fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_1.cif

Chain information for
fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_1.cif
#36  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Computing secondary structure  

> hide #35 models

> color #36 bychain

> open
> /Users/briaclemetais/Downloads/fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b/fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_2.cif

Chain information for
fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_2.cif
#37  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Computing secondary structure  

> hide #36 models

> open
> /Users/briaclemetais/Downloads/fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b/fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_3.cif

Chain information for
fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_3.cif
#38  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Computing secondary structure  

> hide #37 models

> color #38 bychain

> open
> /Users/briaclemetais/Downloads/fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b/fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_4.cif

Chain information for
fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_4.cif
#39  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Computing secondary structure  

> hide #38 models

> color #39 bychain

> style #39 stick

Changed 15346 atom styles  

> select #39/A:1-283

2222 atoms, 2279 bonds, 283 residues, 1 model selected  

> hbonds sel reveal true

1917 hydrogen bonds found  

> color sel byhetero

> select #39/B:1-643

5016 atoms, 5117 bonds, 643 residues, 1 model selected  

> color sel byhetero

> select #39/C:1-991

7931 atoms, 8086 bonds, 991 residues, 1 model selected  

> color sel byhetero

> open
> /Users/briaclemetais/Downloads/fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b/fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_summary_confidences_4.json

Failed opening file
/Users/briaclemetais/Downloads/fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b/fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_summary_confidences_4.json:  
Opening an AlphaFold PAE file requires first opening the predicted atomic
model. Did not find an open atomic model from the same directory. If the
atomic model is already open choose it using menu  
  
Tools / Structure Prediction / AlphaFold Error Plot  
  
or use the open command structure option, for example  
  
open
/Users/briaclemetais/Downloads/fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b/fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_summary_confidences_4.json
structure #1  
  
If you are trying to open a JSON file that is not AlphaFold PAE data then you
need to specify the specific JSON format such as  
  
open mole_channels.json format mole  

> hide #39 models

> show #38 models

> hide #38 models

> show #37 models

> hide #37 models

> show #36 models

> hide #36 models

> show #36 models

> hide #36 models

> show #35 models

> hide #35 models

> show #!34 models

> hide #!34 models

> show #!33 models

> show #32 models

> hide #!33 models

> show #!33 models

> hide #32 models

> hide #!33 models

> show #!34 models

> save "/Users/briaclemetais/Documents/ChimeraX files/FBG2-final version
> alphafold model.cxs"

——— End of log from Mon May 19 14:03:57 2025 ———

> view name session-start

opened ChimeraX session  

> hide #!34 surfaces

> hide #2 models

> show #2 models

> show #!1 models

> hide #!1 models

> show #!1 models

> hide #!1 models

> mlp #!34

Map values for surface
"fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo6_c3b_model_4.cif_A
SES surface": minimum -26.17, mean -4.163, maximum 23.4  
Map values for surface
"fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo6_c3b_model_4.cif_B
SES surface": minimum -28.54, mean -5.415, maximum 23.79  
Map values for surface
"fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo6_c3b_model_4.cif_C
SES surface": minimum -30.51, mean -5.323, maximum 24.86  
To also show corresponding color key, enter the above mlp command and add key
true  

> hide #2 models

> show #!34 surfaces

> hide #!34 surfaces

> show #39 models

> hide #39 models

> hide #!34 models

> show #39 models

> show sel surfaces

> color sel bychain

> show sel surfaces

> select #3/A

13111 atoms, 13376 bonds, 1663 residues, 1 model selected  

> select #1/A

4907 atoms, 5005 bonds, 2 pseudobonds, 630 residues, 2 models selected  

> show #!39 surfaces

> mlp #!39

Map values for surface
"fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_4.cif_A
SES surface": minimum -25.92, mean -4.556, maximum 21.58  
Map values for surface
"fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_4.cif_B
SES surface": minimum -27.38, mean -5.37, maximum 23.83  
Map values for surface
"fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_4.cif_C
SES surface": minimum -29.91, mean -5.247, maximum 24.18  
To also show corresponding color key, enter the above mlp command and add key
true  

> hide #!39 surfaces

> select #1/A

4907 atoms, 5005 bonds, 2 pseudobonds, 630 residues, 2 models selected  

> show #!39 atoms

> color #!39 byhetero

> hbonds #!39 reveal true

13674 hydrogen bonds found  

> mlp #!39

Map values for surface
"fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_4.cif_A
SES surface": minimum -25.92, mean -4.556, maximum 21.58  
Map values for surface
"fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_4.cif_B
SES surface": minimum -27.38, mean -5.37, maximum 23.83  
Map values for surface
"fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_4.cif_C
SES surface": minimum -29.91, mean -5.247, maximum 24.18  
To also show corresponding color key, enter the above mlp command and add key
true  

> hide #!39 surfaces

> mlp #!39

Map values for surface
"fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_4.cif_A
SES surface": minimum -25.92, mean -4.556, maximum 21.58  
Map values for surface
"fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_4.cif_B
SES surface": minimum -27.38, mean -5.37, maximum 23.83  
Map values for surface
"fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_4.cif_C
SES surface": minimum -29.91, mean -5.247, maximum 24.18  
To also show corresponding color key, enter the above mlp command and add key
true  

> select #3/A

13111 atoms, 13376 bonds, 1663 residues, 1 model selected  

> hide #!39 surfaces

> select #1/A

4907 atoms, 5005 bonds, 2 pseudobonds, 630 residues, 2 models selected  

> mlp #!39

Map values for surface
"fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_4.cif_A
SES surface": minimum -25.92, mean -4.556, maximum 21.58  
Map values for surface
"fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_4.cif_B
SES surface": minimum -27.38, mean -5.37, maximum 23.83  
Map values for surface
"fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_4.cif_C
SES surface": minimum -29.91, mean -5.247, maximum 24.18  
To also show corresponding color key, enter the above mlp command and add key
true  

> volume hide

No volumes specified  

> show #4 models

> hide #!39 models

> color #4 bychain

> ui autostart false "Model Panel"

> ui windowfill toggle

[Repeated 1 time(s)]

> view #4 clip false

> hide #4 models

> select add #4

20350 atoms, 20779 bonds, 2 pseudobonds, 2572 residues, 3 models selected  

> show #4 models

> log metadata #4

The model has no metadata

> log chains #4

Chain information for
fold_2025_03_20_11_22_glycan_chain_from_c3bbb_fbxo2_c3b_model_0.cif #4  
---  
Chain | Description  
A | .  
B | .  
C | .  
  

> hide #4 models

> show #!39 models

> hide #!39 models

> show #!39 models

> hide #!39 models

> show #38 models

> hide #38 models

> show #37 models

> hide #37 models

> show #36 models

> hide #36 models

> show #35 models

> hide #35 models

> show #!34 models

> hide #!34 models

> show #!33 models

> mlp #!33

Map values for surface
"fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo6_c3b_model_3.cif_A
SES surface": minimum -25.85, mean -4.212, maximum 23.8  
Map values for surface
"fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo6_c3b_model_3.cif_B
SES surface": minimum -27.5, mean -5.418, maximum 23.67  
Map values for surface
"fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo6_c3b_model_3.cif_C
SES surface": minimum -30.14, mean -5.263, maximum 24.13  
To also show corresponding color key, enter the above mlp command and add key
true  

> hide #!33 surfaces

> mlp #!33

Map values for surface
"fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo6_c3b_model_3.cif_A
SES surface": minimum -25.85, mean -4.212, maximum 23.8  
Map values for surface
"fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo6_c3b_model_3.cif_B
SES surface": minimum -27.5, mean -5.418, maximum 23.67  
Map values for surface
"fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo6_c3b_model_3.cif_C
SES surface": minimum -30.14, mean -5.263, maximum 24.13  
To also show corresponding color key, enter the above mlp command and add key
true  

> hide #!33 surfaces

> mlp #!33

Map values for surface
"fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo6_c3b_model_3.cif_A
SES surface": minimum -25.85, mean -4.212, maximum 23.8  
Map values for surface
"fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo6_c3b_model_3.cif_B
SES surface": minimum -27.5, mean -5.418, maximum 23.67  
Map values for surface
"fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo6_c3b_model_3.cif_C
SES surface": minimum -30.14, mean -5.263, maximum 24.13  
To also show corresponding color key, enter the above mlp command and add key
true  

> hide #!33 surfaces

> show #!33 atoms

> hide #!33 models

> show #32 models

> color #32 bychain

> show #32 atoms

> color #32 byhetero

> mlp #32

Map values for surface
"fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo6_c3b_model_2.cif_A
SES surface": minimum -26.06, mean -4.172, maximum 24.19  
Map values for surface
"fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo6_c3b_model_2.cif_B
SES surface": minimum -27.47, mean -5.44, maximum 23.98  
Map values for surface
"fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo6_c3b_model_2.cif_C
SES surface": minimum -31.92, mean -5.326, maximum 23.56  
To also show corresponding color key, enter the above mlp command and add key
true  

> hide #!32 models

> show #31 models

> color #31 bychain

> hide #31 models

> show #30 models

> color #30 bychain

> hide #30 models

> show #!39 models

> select #4/A:1-296

2352 atoms, 2415 bonds, 296 residues, 1 model selected  

> hide #!39 surfaces

> log chains

Chain information for
fold_2025_03_20_11_22_glycan_chain_complete_fbxo6_c3b_model_1.cif #10  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Chain information for 2i07.pdb #1  
---  
Chain | Description | UniProt  
A | complement C3B | CO3_HUMAN 1-645  
B | complement C3B | CO3_HUMAN 727-1641  
  
Chain information for AF-P01027-F1-model_v4.pdb #3  
---  
Chain | Description | UniProt  
A | complement C3 | CO3_MOUSE 1-1663  
  
Chain information for
fold_2025_03_20_11_22_glycan_chain_from_c3bbb_fbxo2_c3b_model_0.cif #4  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Chain information for
fold_2025_03_20_11_22_glycan_chain_from_c3bbb_fbxo2_c3b_model_1.cif #5  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Chain information for
fold_2025_03_20_11_22_glycan_chain_from_c3bbb_fbxo2_c3b_model_2.cif #6  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Chain information for
fold_2025_03_20_11_22_glycan_chain_from_c3bbb_fbxo2_c3b_model_3.cif #7  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Chain information for
fold_2025_03_20_11_22_glycan_chain_from_c3bbb_fbxo2_c3b_model_4.cif #8  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Chain information for
fold_2025_03_20_11_22_glycan_chain_from_c3bbb_fbxo6_c3b_model_0.cif #9  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Chain information for
fold_2025_03_20_11_22_glycan_chain_from_c3bbb_fbxo6_c3b_model_1.cif #11  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Chain information for
fold_2025_03_20_11_22_glycan_chain_from_c3bbb_fbxo6_c3b_model_2.cif #12  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Chain information for
fold_2025_03_20_11_22_glycan_chain_from_c3bbb_fbxo6_c3b_model_3.cif #13  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Chain information for
fold_2025_03_20_11_22_glycan_chain_from_c3bbb_fbxo6_c3b_model_4.cif #14  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Chain information for
fold_2025_03_20_11_22_alpha_glycan_chain_2_from_c3bbb_fbxo6_c3b_model_0.cif
#15  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Chain information for
fold_2025_03_20_11_22_alpha_glycan_chain_2_from_c3bbb_fbxo6_c3b_model_1.cif
#16  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Chain information for
fold_2025_03_20_11_22_alpha_glycan_chain_2_from_c3bbb_fbxo6_c3b_model_2.cif
#17  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Chain information for
fold_2025_03_20_11_22_alpha_glycan_chain_2_from_c3bbb_fbxo6_c3b_model_3.cif
#18  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Chain information for
fold_2025_03_20_11_22_alpha_glycan_chain_2_from_c3bbb_fbxo6_c3b_model_4.cif
#19  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Chain information for
fold_2025_03_20_11_22_alpha_glycan_chain_2_from_c3bbb_fbxo2_c3b_model_0.cif
#20  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Chain information for
fold_2025_03_20_11_22_alpha_glycan_chain_2_from_c3bbb_fbxo2_c3b_model_1.cif
#21  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Chain information for
fold_2025_03_20_11_22_alpha_glycan_chain_2_from_c3bbb_fbxo2_c3b_model_2.cif
#22  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Chain information for
fold_2025_03_20_11_22_alpha_glycan_chain_2_from_c3bbb_fbxo2_c3b_model_3.cif
#23  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Chain information for
fold_2025_03_20_11_22_alpha_glycan_chain_2_from_c3bbb_fbxo2_c3b_model_4.cif
#24  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Chain information for
fold_2025_03_20_11_22_alpha_glycan_chain_2_from_c3bbb_fbxo2_c3b_model_0.cif
#25  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Chain information for
fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo2_c3b_model_0.cif
#26  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Chain information for
fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo2_c3b_model_1.cif
#27  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Chain information for
fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo2_c3b_model_2.cif
#28  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Chain information for
fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo2_c3b_model_3.cif
#29  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Chain information for
fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo2_c3b_model_4.cif
#30  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Chain information for
fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo6_c3b_model_1.cif
#31  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Chain information for
fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo6_c3b_model_2.cif
#32  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Chain information for
fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo6_c3b_model_3.cif
#33  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Chain information for
fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo6_c3b_model_4.cif
#34  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Chain information for
fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_0.cif
#35  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Chain information for
fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_1.cif
#36  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Chain information for
fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_2.cif
#37  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Chain information for
fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_3.cif
#38  
---  
Chain | Description  
A | .  
B | .  
C | .  
  
Chain information for
fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_4.cif
#39  
---  
Chain | Description  
A | .  
B | .  
C | .  
  

> select #39/B:1-643

5016 atoms, 5117 bonds, 520 pseudobonds, 643 residues, 2 models selected  

> select #39/A:1-283

2222 atoms, 2279 bonds, 227 pseudobonds, 283 residues, 2 models selected  

> mlp sel

Map values for surface
"fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_4.cif_A
SES surface": minimum -25.92, mean -4.556, maximum 21.58  
To also show corresponding color key, enter the above mlp command and add key
true  

> select #39/A:1-283

2222 atoms, 2279 bonds, 227 pseudobonds, 283 residues, 2 models selected  

> select #39/B:1-643

5016 atoms, 5117 bonds, 520 pseudobonds, 643 residues, 2 models selected  

> select #39/C:1-991

7931 atoms, 8086 bonds, 856 pseudobonds, 991 residues, 2 models selected  

> mlp sel

Map values for surface
"fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_4.cif_C
SES surface": minimum -29.91, mean -5.247, maximum 24.18  
To also show corresponding color key, enter the above mlp command and add key
true  

> ui mousemode right distance

> show sel surfaces

> select #1/A#1/B

12118 atoms, 12369 bonds, 4 pseudobonds, 1532 residues, 2 models selected  

> show #!39 surfaces

> pbonds

Unknown command: pbonds  

> hide #!39 surfaces

> ui mousemode right distance

> distance #39/A:212@ND2 #39/A:263@CZ2

Distance between
fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_4.cif
#39/A ASN 212 ND2 and TRP 263 CZ2: 48.107Å  

> distance #39/E:2@C3 #39/A:263@CZ2

Distance between
fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_4.cif
#39/E NAG 2 C3 and /A TRP 263 CZ2: 3.833Å  

> distance #39/A:262@CE2 #39/C:272@CG2

Distance between
fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_4.cif
#39/A PHE 262 CE2 and /C VAL 272 CG2: 4.609Å  

> select down

12118 atoms, 12369 bonds, 4 pseudobonds, 1532 residues, 2 models selected  

> select down

12118 atoms, 12369 bonds, 4 pseudobonds, 1532 residues, 2 models selected  

> select down

12118 atoms, 12369 bonds, 4 pseudobonds, 1532 residues, 2 models selected  

> select down

12118 atoms, 12369 bonds, 4 pseudobonds, 1532 residues, 2 models selected  

> select down

12118 atoms, 12369 bonds, 4 pseudobonds, 1532 residues, 2 models selected  

> ~distance #39/A:212@ND2 #39/A:263@CZ2

> distance #39/E:7@C6 #39/A:229@CH2

Distance between
fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_4.cif
#39/E MAN 7 C6 and /A TRP 229 CH2: 3.659Å  

> distance #39/A:267@OH #39/E:4@O3

Distance between
fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_4.cif
#39/A TYR 267 OH and /E MAN 4 O3: 3.910Å  

> distance #39/A:262@CD1 #39/C:309@CD2

Distance between
fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_4.cif
#39/A PHE 262 CD1 and /C LEU 309 CD2: 4.023Å  

> distance #39/A:262@CD1 #39/C:647@CD2

Distance between
fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_4.cif
#39/A PHE 262 CD1 and /C LEU 647 CD2: 5.689Å  

> select #39/A:1-283

2222 atoms, 2279 bonds, 227 pseudobonds, 283 residues, 2 models selected  

> hbonds sel reveal true

1916 hydrogen bonds found  

> mlp sel

Map values for surface
"fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_4.cif_A
SES surface": minimum -25.92, mean -4.556, maximum 21.58  
To also show corresponding color key, enter the above mlp command and add key
true  

> hide sel surfaces

> distance #39/A:128@SD #39/C:578@CG

Distance between
fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_4.cif
#39/A MET 128 SD and /C PRO 578 CG: 5.639Å  

> distance #39/A:129@CG2 #39/C:318@CE

Distance between
fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_4.cif
#39/A VAL 129 CG2 and /C MET 318 CE: 4.632Å  

> mlp sel

Map values for surface
"fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_4.cif_A
SES surface": minimum -25.92, mean -4.556, maximum 21.58  
To also show corresponding color key, enter the above mlp command and add key
true  

> select #39/B:1-643

5016 atoms, 5117 bonds, 643 residues, 1 model selected  

> mlp sel

Map values for surface
"fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_4.cif_B
SES surface": minimum -27.38, mean -5.37, maximum 23.83  
To also show corresponding color key, enter the above mlp command and add key
true  

> hide sel surfaces

> select #39/A:1-283

2222 atoms, 2279 bonds, 227 pseudobonds, 283 residues, 2 models selected  

> select #39/C:1-991

7931 atoms, 8086 bonds, 991 residues, 1 model selected  

> select #39/A:1-283

2222 atoms, 2279 bonds, 227 pseudobonds, 283 residues, 2 models selected  

> hide sel surfaces

> distance #39/A:160@NE1 #39/C:647@CB

Distance between
fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_4.cif
#39/A TRP 160 NE1 and /C LEU 647 CB: 14.949Å  

> ~distance #39/A:160@NE1 #39/C:647@CB

> distance #39/B:151@CD1 #39/A:262@CB

Distance between
fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_4.cif
#39/B ILE 151 CD1 and /A PHE 262 CB: 4.759Å  

> mlp sel

Map values for surface
"fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_4.cif_A
SES surface": minimum -25.92, mean -4.556, maximum 21.58  
To also show corresponding color key, enter the above mlp command and add key
true  

> hide sel surfaces

> distance #39/A:158@CZ #39/C:647@CD1

Distance between
fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_4.cif
#39/A PHE 158 CZ and /C LEU 647 CD1: 5.494Å  

> mlp sel

Map values for surface
"fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_4.cif_A
SES surface": minimum -25.92, mean -4.556, maximum 21.58  
To also show corresponding color key, enter the above mlp command and add key
true  

> select #39/B:1-643

5016 atoms, 5117 bonds, 643 residues, 1 model selected  

> color sel bychain

> select #39/A:1-283

2222 atoms, 2279 bonds, 227 pseudobonds, 283 residues, 2 models selected  

> select #39/C:1-991

7931 atoms, 8086 bonds, 991 residues, 1 model selected  

> mlp sel

Map values for surface
"fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_4.cif_C
SES surface": minimum -29.91, mean -5.247, maximum 24.18  
To also show corresponding color key, enter the above mlp command and add key
true  

> hide sel surfaces

> select #39/A:1-283

2222 atoms, 2279 bonds, 227 pseudobonds, 283 residues, 2 models selected  

> hide sel surfaces

> distance #39/A:201@SD #39/A:201@CE

Distance between
fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_4.cif
#39/A MET 201 SD and CE: 1.800Å  

> distance #39/C:272@CG1 #39/C:272@CB

Distance between
fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_4.cif
#39/C VAL 272 CG1 and CB: 1.528Å  

> ~distance #39/C:272@CG1 #39/C:272@CB

> ~distance #39/A:201@SD #39/A:201@CE

> distance #39/C:272@CG1 #39/A:201@CE

Distance between
fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_4.cif
#39/C VAL 272 CG1 and /A MET 201 CE: 3.735Å  

> mlp sel

Map values for surface
"fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_4.cif_A
SES surface": minimum -25.92, mean -4.556, maximum 21.58  
To also show corresponding color key, enter the above mlp command and add key
true  

> select #39/C:1-991

7931 atoms, 8086 bonds, 991 residues, 1 model selected  

> mlp sel

Map values for surface
"fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_4.cif_C
SES surface": minimum -29.91, mean -5.247, maximum 24.18  
To also show corresponding color key, enter the above mlp command and add key
true  

> distance #39/C:280@CD2 #39/C:575@CG

Distance between
fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_4.cif
#39/C LEU 280 CD2 and ASP 575 CG: 19.594Å  

> ~distance #39/C:280@CD2 #39/C:575@CG

> hide sel surfaces

> mlp sel

Map values for surface
"fold_2025_03_20_11_22_alpha_glycan_chain_3_from_c3bbb_fbxo27_c3b_model_4.cif_C
SES surface": minimum -29.91, mean -5.247, maximum 24.18  
To also show corresponding color key, enter the above mlp command and add key
true  

> hide sel surfaces

> select #39/A:1-283

2222 atoms, 2279 bonds, 227 pseudobonds, 283 residues, 2 models selected  

> hide sel surfaces

> ui mousemode right distance

> ui mousemode right select

No map chosen to save  

> select clear

> save "C:/Users/briac/ChimeraX models/FBXO27/FBG5-C3b-hydrophobic
> interactions distance.pdb" displayedOnly true

Cannot save 'C:/Users/briac/ChimeraX models/FBXO27/FBG5-C3b-hydrophobic
interactions distance.pdb': Unable to open file 'C:/Users/briac/ChimeraX
models/FBXO27/FBG5-C3b-hydrophobic interactions distance.pdb' for writing  

> save "C:/Users/briac/ChimeraX models/FBGS-C3b alphfold models.cxs"

——— End of log from Mon May 19 22:43:01 2025 ———

> view name session-start

opened ChimeraX session  




OpenGL version: 3.3.0 NVIDIA 560.94
OpenGL renderer: NVIDIA GeForce GTX 1650 Ti/PCIe/SSE2
OpenGL vendor: NVIDIA Corporation

Python: 3.11.4
Locale: fr_FR.cp1252
Qt version: PyQt6 6.8.1, Qt 6.8.2
Qt runtime version: 6.8.2
Qt platform: windows

Manufacturer: LENOVO
Model: 82EY
OS: Microsoft Windows 11 Famille (Build 26100)
Memory: 7,916,032,000
MaxProcessMemory: 137,438,953,344
CPU: 12 AMD Ryzen 5 4600H with Radeon Graphics         
OSLanguage: fr-FR

Installed Packages:
    alabaster: 1.0.0
    appdirs: 1.4.4
    asttokens: 3.0.0
    auditwheel: 6.3.0
    babel: 2.17.0
    beautifulsoup4: 4.13.3
    blockdiag: 3.0.0
    blosc2: 3.3.3
    build: 1.2.2.post1
    certifi: 2025.4.26
    cftime: 1.6.4.post1
    charset-normalizer: 3.4.2
    ChimeraX-AddCharge: 1.5.18
    ChimeraX-AddH: 2.2.7
    ChimeraX-AlignmentAlgorithms: 2.0.2
    ChimeraX-AlignmentHdrs: 3.6.1
    ChimeraX-AlignmentMatrices: 2.1
    ChimeraX-Alignments: 2.20.1
    ChimeraX-AlphaFold: 1.0.1
    ChimeraX-AltlocExplorer: 1.1.2
    ChimeraX-AmberInfo: 1.0
    ChimeraX-Aniso: 1.1.3
    ChimeraX-Arrays: 1.1
    ChimeraX-Atomic: 1.60.6
    ChimeraX-AtomicLibrary: 14.1.18
    ChimeraX-AtomSearch: 2.0.1
    ChimeraX-AxesPlanes: 2.4
    ChimeraX-BasicActions: 1.1.3
    ChimeraX-BILD: 1.0
    ChimeraX-BlastProtein: 3.0.0
    ChimeraX-Boltz: 1.0
    ChimeraX-BondRot: 2.0.4
    ChimeraX-BugReporter: 1.0.2
    ChimeraX-BuildStructure: 2.13.1
    ChimeraX-Bumps: 1.0
    ChimeraX-BundleBuilder: 1.5.1
    ChimeraX-ButtonPanel: 1.0.1
    ChimeraX-CageBuilder: 1.0.1
    ChimeraX-CellPack: 1.0
    ChimeraX-Centroids: 1.4
    ChimeraX-ChangeChains: 1.1
    ChimeraX-CheckWaters: 1.5
    ChimeraX-ChemGroup: 2.0.2
    ChimeraX-Clashes: 2.3
    ChimeraX-ColorActions: 1.0.5
    ChimeraX-ColorGlobe: 1.0
    ChimeraX-ColorKey: 1.5.8
    ChimeraX-CommandLine: 1.3
    ChimeraX-ConnectStructure: 2.0.1
    ChimeraX-Contacts: 1.0.1
    ChimeraX-Core: 1.10rc202505160006
    ChimeraX-CoreFormats: 1.2
    ChimeraX-coulombic: 1.4.5
    ChimeraX-Crosslinks: 1.0
    ChimeraX-Crystal: 1.0
    ChimeraX-CrystalContacts: 1.0.1
    ChimeraX-DataFormats: 1.2.4
    ChimeraX-Dicom: 1.2.7
    ChimeraX-DistMonitor: 1.4.2
    ChimeraX-DockPrep: 1.1.4
    ChimeraX-Dssp: 2.0
    ChimeraX-EMDB-SFF: 1.0
    ChimeraX-ESMFold: 1.0
    ChimeraX-FileHistory: 1.0.1
    ChimeraX-FunctionKey: 1.0.1
    ChimeraX-Geometry: 1.3
    ChimeraX-gltf: 1.0
    ChimeraX-Graphics: 1.4.1
    ChimeraX-Hbonds: 2.5.1
    ChimeraX-Help: 1.3
    ChimeraX-HKCage: 1.3
    ChimeraX-IHM: 1.1
    ChimeraX-ImageFormats: 1.2
    ChimeraX-IMOD: 1.0
    ChimeraX-IO: 1.0.3
    ChimeraX-ItemsInspection: 1.0.1
    ChimeraX-IUPAC: 1.0
    ChimeraX-KVFinder: 1.6.2
    ChimeraX-Label: 1.1.14
    ChimeraX-ListInfo: 1.2.2
    ChimeraX-Log: 1.2
    ChimeraX-LookingGlass: 1.1
    ChimeraX-Maestro: 1.9.1
    ChimeraX-Map: 1.3
    ChimeraX-MapData: 2.0
    ChimeraX-MapEraser: 1.0.1
    ChimeraX-MapFilter: 2.0.1
    ChimeraX-MapFit: 2.0
    ChimeraX-MapSeries: 2.1.1
    ChimeraX-Markers: 1.0.1
    ChimeraX-Mask: 1.0.2
    ChimeraX-MatchMaker: 2.2.1
    ChimeraX-MCopy: 1.0
    ChimeraX-MDcrds: 2.10.1
    ChimeraX-MedicalToolbar: 1.1
    ChimeraX-Meeting: 1.0.1
    ChimeraX-MLP: 1.1.1
    ChimeraX-mmCIF: 2.16
    ChimeraX-MMTF: 2.2
    ChimeraX-ModelArchive: 1.0
    ChimeraX-Modeller: 1.5.19
    ChimeraX-ModelPanel: 1.5.1
    ChimeraX-ModelSeries: 1.0.1
    ChimeraX-Mol2: 2.0.3
    ChimeraX-Mole: 1.0
    ChimeraX-Morph: 1.0.2
    ChimeraX-MouseModes: 1.2
    ChimeraX-Movie: 1.0
    ChimeraX-MutationScores: 1.0
    ChimeraX-Neuron: 1.0
    ChimeraX-Nifti: 1.2
    ChimeraX-NMRSTAR: 1.0.2
    ChimeraX-NRRD: 1.2
    ChimeraX-Nucleotides: 2.0.3
    ChimeraX-OpenCommand: 1.14.1
    ChimeraX-OrthoPick: 1.0.1
    ChimeraX-PDB: 2.7.10
    ChimeraX-PDBBio: 1.0.1
    ChimeraX-PDBLibrary: 1.0.4
    ChimeraX-PDBMatrices: 1.0
    ChimeraX-PickBlobs: 1.0.1
    ChimeraX-Positions: 1.0
    ChimeraX-PresetMgr: 1.1.3
    ChimeraX-ProfileGrids: 1.1.2
    ChimeraX-PubChem: 2.2
    ChimeraX-ReadPbonds: 1.0.1
    ChimeraX-Registration: 1.1.2
    ChimeraX-RemoteControl: 1.0
    ChimeraX-RenderByAttr: 1.6.3
    ChimeraX-RenumberResidues: 1.1
    ChimeraX-ResidueFit: 1.0.1
    ChimeraX-RestServer: 1.3.1
    ChimeraX-RNALayout: 1.0
    ChimeraX-RotamerLibMgr: 4.0
    ChimeraX-RotamerLibsDunbrack: 2.0
    ChimeraX-RotamerLibsDynameomics: 2.0
    ChimeraX-RotamerLibsRichardson: 2.0
    ChimeraX-SaveCommand: 1.5.1
    ChimeraX-SchemeMgr: 1.0
    ChimeraX-SDF: 2.0.3
    ChimeraX-Segger: 1.0
    ChimeraX-Segment: 1.0.1
    ChimeraX-Segmentations: 3.5.7
    ChimeraX-SelInspector: 1.0
    ChimeraX-SeqView: 2.17.1
    ChimeraX-Shape: 1.1
    ChimeraX-Shell: 1.0.1
    ChimeraX-Shortcuts: 1.2.0
    ChimeraX-ShowSequences: 1.0.3
    ChimeraX-SideView: 1.0.1
    ChimeraX-SimilarStructures: 1.0.1
    ChimeraX-Smiles: 2.1.2
    ChimeraX-SmoothLines: 1.0
    ChimeraX-SpaceNavigator: 1.0
    ChimeraX-StdCommands: 1.19.1
    ChimeraX-STL: 1.0.1
    ChimeraX-Storm: 1.0
    ChimeraX-StructMeasure: 1.2.1
    ChimeraX-Struts: 1.0.1
    ChimeraX-Surface: 1.0.1
    ChimeraX-SwapAA: 2.0.1
    ChimeraX-SwapRes: 2.5.2
    ChimeraX-TapeMeasure: 1.0
    ChimeraX-TaskManager: 1.0
    ChimeraX-Test: 1.0
    ChimeraX-Toolbar: 1.2.3
    ChimeraX-ToolshedUtils: 1.2.4
    ChimeraX-Topography: 1.0
    ChimeraX-ToQuest: 1.0
    ChimeraX-Tug: 1.0.1
    ChimeraX-UI: 1.45.1
    ChimeraX-Umap: 1.0
    ChimeraX-uniprot: 2.3.1
    ChimeraX-UnitCell: 1.0.1
    ChimeraX-ViewDockX: 1.4.4
    ChimeraX-VIPERdb: 1.0
    ChimeraX-Vive: 1.1
    ChimeraX-VolumeMenu: 1.0.1
    ChimeraX-vrml: 1.0
    ChimeraX-VTK: 1.0
    ChimeraX-WavefrontOBJ: 1.0
    ChimeraX-WebCam: 1.0.2
    ChimeraX-WebServices: 1.1.5
    ChimeraX-Zone: 1.0.1
    colorama: 0.4.6
    comm: 0.2.2
    comtypes: 1.4.10
    contourpy: 1.3.2
    coverage: 7.8.0
    cxservices: 1.2.3
    cycler: 0.12.1
    Cython: 3.0.12
    debugpy: 1.8.14
    decorator: 5.2.1
    docutils: 0.21.2
    executing: 2.2.0
    filelock: 3.18.0
    fonttools: 4.58.0
    funcparserlib: 2.0.0a0
    glfw: 2.9.0
    grako: 3.16.5
    h5py: 3.13.0
    html2text: 2024.2.26
    idna: 3.10
    ihm: 2.2
    imagecodecs: 2024.6.1
    imagesize: 1.4.1
    iniconfig: 2.1.0
    ipykernel: 6.29.5
    ipython: 8.26.0
    ipywidgets: 8.1.7
    jedi: 0.19.1
    Jinja2: 3.1.6
    jupyter_client: 8.6.3
    jupyter_core: 5.7.2
    jupyterlab_widgets: 3.0.15
    kiwisolver: 1.4.8
    line_profiler: 4.2.0
    lxml: 5.3.1
    lz4: 4.4.4
    MarkupSafe: 3.0.2
    matplotlib: 3.10.1
    matplotlib-inline: 0.1.7
    msgpack: 1.1.0
    ndindex: 1.9.2
    nest-asyncio: 1.6.0
    netCDF4: 1.6.5
    networkx: 3.3
    nibabel: 5.2.0
    nptyping: 2.5.0
    numexpr: 2.10.2
    numpy: 1.26.4
    OpenMM: 8.2.0
    openvr: 1.26.701
    packaging: 24.2
    ParmEd: 4.2.2
    parso: 0.8.4
    pep517: 0.13.1
    pickleshare: 0.7.5
    pillow: 10.4.0
    pip: 25.0.1
    pkginfo: 1.11.1
    platformdirs: 4.3.8
    pluggy: 1.6.0
    prompt_toolkit: 3.0.51
    psutil: 7.0.0
    pure_eval: 0.2.3
    py-cpuinfo: 9.0.0
    pycollada: 0.8
    pydicom: 2.4.4
    pyelftools: 0.32
    Pygments: 2.18.0
    pynmrstar: 3.3.5
    pynrrd: 1.0.0
    PyOpenGL: 3.1.9
    PyOpenGL-accelerate: 3.1.9
    pyopenxr: 1.1.4501
    pyparsing: 3.2.3
    pyproject_hooks: 1.2.0
    PyQt6-commercial: 6.8.1
    PyQt6-Qt6: 6.8.2
    PyQt6-WebEngine-commercial: 6.8.0
    PyQt6-WebEngine-Qt6: 6.8.2
    PyQt6_sip: 13.10.0
    pytest: 8.3.5
    pytest-cov: 6.1.1
    python-dateutil: 2.9.0.post0
    pytz: 2025.2
    pywin32: 310
    pyzmq: 26.4.0
    qtconsole: 5.5.2
    QtPy: 2.4.3
    qtshim: 1.1
    RandomWords: 0.4.0
    requests: 2.32.3
    roman-numerals-py: 3.1.0
    scipy: 1.14.0
    setuptools: 78.1.0
    sfftk-rw: 0.8.1
    six: 1.16.0
    snowballstemmer: 3.0.1
    sortedcontainers: 2.4.0
    soupsieve: 2.7
    Sphinx: 8.2.3
    sphinx-autodoc-typehints: 3.1.0
    sphinxcontrib-applehelp: 2.0.0
    sphinxcontrib-blockdiag: 3.0.0
    sphinxcontrib-devhelp: 2.0.0
    sphinxcontrib-htmlhelp: 2.1.0
    sphinxcontrib-jsmath: 1.0.1
    sphinxcontrib-qthelp: 2.0.0
    sphinxcontrib-serializinghtml: 2.0.0
    stack-data: 0.6.3
    superqt: 0.7.1
    tables: 3.10.2
    tcia_utils: 1.5.1
    tifffile: 2025.3.13
    tinyarray: 1.2.4
    tornado: 6.5
    traitlets: 5.14.3
    typing_extensions: 4.13.2
    tzdata: 2025.2
    urllib3: 2.4.0
    wcwidth: 0.2.13
    webcolors: 24.11.1
    wheel: 0.45.1
    wheel-filename: 1.4.2
    widgetsnbextension: 4.0.14
    WMI: 1.5.1

Change History (3)

comment:1 by Eric Pettersen, 5 months ago

Cc: Tom Goddard added
Component: Unassigned → UI
Owner: set to Eric Pettersen
Platform: → all
Project: → ChimeraX
Status: new → accepted
Summary: ChimeraX bug report submission → Crash using open/save dialog

comment:2 by Eric Pettersen, 5 months ago

Resolution: → can't reproduce
Status: accepted → closed

French locale; File "C:\Program Files\ChimeraX 1.10rc202505160006\bin\Lib\site-packages\chimerax\core\triggerset.py", line 248 in _activate

comment:3 by Tom Goddard, 5 months ago

I bet the trigger activate is either the "graphics update" or "new frame" trigger both occuring in the graphics drawing code. I don't think the crash is related to graphics since we never see it in some OpenGL call. Instead it probably is just the case that when showing the modal open/save dialog the only code being run that might trigger Pytho n garbage collection is the graphics drawing code.

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