'ScaledGrid' object has no attribute 'dicom_data'

[chimerax-bug-report@…]

The following bug report has been submitted:
Platform:        Linux-6.2.0-26-generic-x86_64-with-glibc2.35
ChimeraX Version: 1.9 (2024-12-11 19:11:19 UTC)
Description
Replace this text with list of actions that caused this problem to occur

Log:
Startup Messages  
---  
note | available bundle cache has not been initialized yet  
  
UCSF ChimeraX version: 1.9 (2024-12-11)  
© 2016-2024 Regents of the University of California. All rights reserved.  
How to cite UCSF ChimeraX  

> open
> /ChangLab5-hd1/Sharon/Plasmodium/SG/Dynamo_Averaging/Data_set/catalogues/rhmembrane_nodup_Cylmask_180flip_run6/results/ite_0009/averages/average_ref_001_ite_0009.em

Opened average_ref_001_ite_0009.em as #1, grid size 64,64,64, pixel 1, shown
at level 2.53, step 1, values float32  

> vop scalar f-1

> volume scalar f-1

Expected a density maps specifier or a keyword  

> vop scalar #1 f-1

> volume scalar #1 f-1

Expected a density maps specifier or a keyword  

> vop scale #1 f -1

Opened average_ref_001_ite_0009.em scaled as #2, grid size 64,64,64, pixel 1,
shown at step 1, values float32  

> vop scale #1 f -1

Opened average_ref_001_ite_0009.em scaled as #3, grid size 64,64,64, pixel 1,
shown at step 1, values float32  

> close #1

> volume #2 color #f66151

> set bgColor white

> volume #3 level 0.4578

> surface dust #2 size 1

> volume #2 level 0.5193

> surface dust #2 size 2

> surface dust #2 size 10

> surface dust #2 size 20

> volume #2 level 0.4578

> surface dust #2 size 50

> surface dust #2 size 100

> surface dust #2 size -100

> surface dust #2 size 50

> surface dust #2 size 60

> surface dust #2 size 70

> surface dust #2 size -70

> surface dust #2 size 60

> surface dust #2 size 61

> surface dust #2 size 62

> volume #2 level 0.3841

> volume #2 level 0.2612

> surface dust #2 size 60

> surface dust #2 size 65

> surface dust #2 size 60

> volume #2 level 0.3227

> surface dust #2 size 10

[Repeated 3 time(s)]

Fit in map shortcut requires 1 displayed atomic model and 1 map or two maps,
got 0 atomic models, 1 maps.  

> surface dust #2 size 10

[Repeated 1 time(s)]

Color zone shortcut requires 1 displayed atomic model and 1 map, got 0 atomic
models, 1 maps.  

> surface dust #2 size 60

> volume show

> transparency 50

> color #3 #dc8addff models

> color #3 #cdab8fff models

> color #3 #c061cbff models

> color #3 #ed333bff models

> color #3 #ffa348ff models

> color #3 #f8e45cff models

> color #3 #f9f06bff models

> color #3 #f8e45cff models

> color #3 #e5a50aff models

> volume #3 level 0.7527

> transparency 0

> transparency 50

> transparency 0

> transparency 50

> transparency 0

> transparency 50

> transparency 0

> transparency 50

> transparency 0

> hide #!3 models

> transparency #2.1 50

> undo

[Repeated 9 time(s)]

> hide #!3 models

> hide #3.1 models

> show #3.1 models

> hide #3.1 models

> hide #!3 models

> hide #2.1 models

> show #2.1 models

> color #2 #c64600ff models

> color #2 #e66100ff models

> color #2 #ff7800ff models

> lighting simple

> lighting soft

> lighting full

> lighting simple

> lighting soft

> lighting full

> lighting simple

> lighting soft

> lighting full

> show #!3 models

> hide #!2 models

> show #!2 models

> hide #!2 models

> hide #!3 models

> show #!3 models

> show #3.1 models

> surface dust #2 size 60

[Repeated 1 time(s)]

> surface dust # size 60

Missing or invalid "surfaces" argument: invalid surfaces specifier  

> surface dust #3 size 60

> color #3 #f66151ff models

> transparency 0 #3

Expected a collection of one of 'All', 'atoms', 'bonds', 'cartoons', 'labels',
'models', 'pseudobonds', 'ribbons', 'rings', or 'surfaces' or a keyword  

> transparency 0 #3.1

Expected a collection of one of 'All', 'atoms', 'bonds', 'cartoons', 'labels',
'models', 'pseudobonds', 'ribbons', 'rings', or 'surfaces' or a keyword  

> transparency #3.1 0

> transparency 0

> lighting simple

> lighting soft

> lighting full

> volume #3 level 0.4087

> lighting simple

> lighting soft

> lighting full

[Repeated 1 time(s)]

> lighting soft

> lighting full

> volume #3 level 0.7036

> show #!2 models

> transparency 50

[Repeated 1 time(s)]

> transparency 90

> transparency #3.1 0

> set bgColor black

> ui tool show "Side View"

> color #3 white models

> color #2.1 #dc8addff

> ui tool show "Side View"

> view orient

> color #2.1 #ffbe6fff

> color #2.1 #ff7800ff

> transparency #3.1 50

> transparency #3.1 0

> transparency #2.1 50

> transparency #2.1 70

> set bgColor white

> color #3 black models

> color #2 #ffbe6fff models

> color #3 #ffbe6fff models

> color #3 #ff7800ff models

> hide #!3 models

> hide #3.1 models

> transparency #2.1 0

> volume #2 level 0.3841

> volume #2 level 0.3718

> surface dust #2 size 60

> surface dust #2.1 size 60

> volume #2 level 0.421

> ui mousemode right "pick blobs"

> measure blob #!2.1 triangleNumber 30054 color #0000ccff outline true

Surface average_ref_001_ite_0009.em scaled #2.1 blob:  
volume = 33487  
area = 17636  
size = 85.482 72.357 45.595  
  

> measure blob #!2.1 triangleNumber 52808 color #fb062dff outline true

Surface average_ref_001_ite_0009.em scaled #2.1 blob:  
volume = 33487  
area = 17636  
size = 85.482 72.357 45.595  
  

> measure blob #!2.1 triangleNumber 6226 color #3ef524ff outline true

Surface average_ref_001_ite_0009.em scaled #2.1 blob:  
volume = 33487  
area = 17636  
size = 85.482 72.357 45.595  
  

> volume #2 level 0.507

> measure blob #!2.1 triangleNumber 1924 color #f6193fff outline true

Surface average_ref_001_ite_0009.em scaled #2.1 blob:  
volume = 25520  
area = 14577  
size = 84.384 68.047 40.566  
  

> measure blob #!2.1 triangleNumber 22617 color #c9894dff outline true

Surface average_ref_001_ite_0009.em scaled #2.1 blob:  
volume = 25520  
area = 14577  
size = 84.384 68.047 40.566  
  

> ui mousemode right "map eraser"

[Repeated 4 time(s)]

> ui mousemode right "pick blobs"

[Repeated 2 time(s)]

> volume erase #2 center 58.85,19.006,-5.0461 radius 17.874

Opened average_ref_001_ite_0009.em scaled copy as #4, grid size 64,64,64,
pixel 1, shown at step 1, values float32  

> measure blob #!1 triangleNumber 531 color #ba37a6ff outline true

Surface eraser sphere #1 blob:  
volume = 23575  
area = 3982  
size = 35.623 35.578 35.592  
  

> measure blob #!1 triangleNumber 605 color #d83a7bff outline true

Surface eraser sphere #1 blob:  
volume = 23575  
area = 3982  
size = 35.623 35.578 35.592  
  

> measure blob #!1 triangleNumber 686 color #f54701ff outline true

Surface eraser sphere #1 blob:  
volume = 23575  
area = 3982  
size = 35.623 35.578 35.592  
  

> ui mousemode right "map eraser"

> volume erase #4 center 62.758,46.862,-4.545 radius 17.856

> volume erase #4 center 1.7293,13.867,55.259 radius 17.856

> volume erase #4 center 59.8,-5.3351,4.8407 radius 17.856

> volume erase #4 center 65.8,5.0088,63.061 radius 17.856

> volume erase #4 center 61.538,31.883,73.244 radius 17.856

> volume erase #4 center 64.428,44.751,78.69 radius 17.856

> volume erase #4 center 63.211,13.55,47.641 radius 17.856

> volume erase #4 center 77.073,6.5405,32.954 radius 17.856

> volume erase #4 center 68.607,32.755,39.371 radius 17.856

> volume erase #4 center 64.736,47.162,60.593 radius 17.856

> ui mousemode right "tape measure"

> ui mousemode right "play map series"

> ui mousemode right "pick blobs"

> ui mousemode right "map eraser"

> ui mousemode right "pick blobs"

> volume #4 level 0.3595

> measure blob #!1 triangleNumber 434 color #0000ccff outline true

Surface eraser sphere #1 blob:  
volume = 23575  
area = 3982  
size = 35.623 35.578 35.592  
  

> measure blob #!1 triangleNumber 359 color #cf7f4eff outline true

Surface eraser sphere #1 blob:  
volume = 23575  
area = 3982  
size = 35.623 35.578 35.592  
  

> measure blob #!1 triangleNumber 435 color #49abaeff outline true

Surface eraser sphere #1 blob:  
volume = 23575  
area = 3982  
size = 35.623 35.578 35.592  
  

> measure blob #!1 triangleNumber 105 color #e96801ff outline true

Surface eraser sphere #1 blob:  
volume = 23575  
area = 3982  
size = 35.623 35.578 35.592  
  

> ui mousemode right "map eraser"

> volume erase #4 center -3.8926,36.925,58.455 radius 17.856

> volume erase #4 center 1.2566,31.155,48.299 radius 17.856

> undo

[Repeated 1 time(s)]

> ui tool show "Side View"

[Repeated 1 time(s)]

> view orient

Can only have one displayed volume when erasing  

[Repeated 1 time(s)]

> surface dust #3 size 10

> surface dust #4 size 10

Can only have one displayed volume when erasing  

[Repeated 1 time(s)]

> ui mousemode right "map eraser"

[Repeated 1 time(s)]

> ui mousemode right "pick blobs"

> ui mousemode right "mark surface"

> marker #5 position 7.352,59.78,29.76 color yellow radius 1

> marker #5 position 9.617,54.03,32.24 color yellow radius 1

> marker #5 position 13.63,39.93,33.87 color yellow radius 1

> ui mousemode right "delete markers"

> marker delete #5:3

> marker delete #5:2

> marker delete #5:1

> ui tool show "Segment Map"

No segmentation chosen  
Segmenting average_ref_001_ite_0009.em scaled copy, density threshold 0.359517  
Showing 3 region surfaces  
413 watershed regions, grouped to 3 regions  
Showing average_ref_001_ite_0009 scaled copy.seg - 3 regions, 3 surfaces  
Segmenting average_ref_001_ite_0009.em scaled copy, density threshold 0.359517  
Showing 3 region surfaces  
413 watershed regions, grouped to 3 regions  
Showing average_ref_001_ite_0009 scaled copy.seg - 3 regions, 3 surfaces  
Segmenting average_ref_001_ite_0009.em scaled copy, density threshold 0.359517  
Showing 3 region surfaces  
413 watershed regions, grouped to 3 regions  
Showing average_ref_001_ite_0009 scaled copy.seg - 3 regions, 3 surfaces  
Smoothing and grouping, standard deviation 5 voxels  
No new groups smoothing 5 voxels  
No new groups smoothing 6 voxels  
No new groups smoothing 7 voxels  
Showing 2 region surfaces  
Got 2 regions after smoothing 8 voxels.  
Ungrouped to 2 regions  
Please select a region to fit to  
Segmenting average_ref_001_ite_0009.em scaled copy, density threshold 0.359517  
Only showing 60 of 83 regions.  
Showing 60 of 83 region surfaces  
413 watershed regions, grouped to 83 regions  
Showing average_ref_001_ite_0009 scaled copy.seg - 83 regions, 60 surfaces  
Segmenting average_ref_001_ite_0009.em scaled copy, density threshold 0.359517  
Showing 16 region surfaces  
413 watershed regions, grouped to 16 regions  
Showing average_ref_001_ite_0009 scaled copy.seg - 16 regions, 16 surfaces  
Segmenting average_ref_001_ite_0009.em scaled copy, density threshold 0.359517  
Showing 16 region surfaces  
413 watershed regions, grouped to 16 regions  
Showing average_ref_001_ite_0009 scaled copy.seg - 16 regions, 16 surfaces  

> volume #4 level 0.654

> volume #4 level 0.4398

> hide #3.1 models

> show #3.1 models

> hide #3.1 models

> hide #!3 models

> hide #2.1 models

> hide #!1 models

> show #!1 models

> hide #!1 models

> show #!1 models

> hide #1.1 models

> show #1.1 models

> hide #1.1 models

Smoothing and grouping, standard deviation 3 voxels  
Showing 3 region surfaces  
Got 3 regions after smoothing 3 voxels.  
Ungrouped to 14 regions  
Segmenting average_ref_001_ite_0009.em scaled copy, density threshold 0.439833  
Only showing 60 of 70 regions.  
Showing 60 of 70 region surfaces  
322 watershed regions, grouped to 70 regions  
Showing average_ref_001_ite_0009 scaled copy.seg - 70 regions, 60 surfaces  
Segmenting average_ref_001_ite_0009.em scaled copy, density threshold 0.439833  
Only showing 60 of 70 regions.  
Showing 60 of 70 region surfaces  
322 watershed regions, grouped to 70 regions  
Showing average_ref_001_ite_0009 scaled copy.seg - 70 regions, 60 surfaces  
Segmenting average_ref_001_ite_0009.em scaled copy, density threshold 0.439833  
Only showing 60 of 70 regions.  
Showing 60 of 70 region surfaces  
322 watershed regions, grouped to 70 regions  
Showing average_ref_001_ite_0009 scaled copy.seg - 70 regions, 60 surfaces  
Segmenting average_ref_001_ite_0009.em scaled copy, density threshold 0.439833  
Only showing 60 of 205 regions.  
Showing 60 of 205 region surfaces  
322 watershed regions, grouped to 205 regions  
Showing average_ref_001_ite_0009 scaled copy.seg - 205 regions, 60 surfaces  
Segmenting average_ref_001_ite_0009.em scaled copy, density threshold 0.439833  
Only showing 60 of 94 regions.  
Showing 60 of 94 region surfaces  
322 watershed regions, grouped to 94 regions  
Showing average_ref_001_ite_0009 scaled copy.seg - 94 regions, 60 surfaces  
Segmenting average_ref_001_ite_0009.em scaled copy, density threshold 0.439833  
Only showing 60 of 83 regions.  
Showing 60 of 83 region surfaces  
322 watershed regions, grouped to 83 regions  
Showing average_ref_001_ite_0009 scaled copy.seg - 83 regions, 60 surfaces  
Segmenting average_ref_001_ite_0009.em scaled copy, density threshold 0.439833  
Only showing 60 of 77 regions.  
Showing 60 of 77 region surfaces  
322 watershed regions, grouped to 77 regions  
Showing average_ref_001_ite_0009 scaled copy.seg - 77 regions, 60 surfaces  

> hide #!1 models

> show #!1 models

Fit in map shortcut requires 1 displayed atomic model and 1 map or two maps,
got 0 atomic models, 0 maps.  

Hide dust shortcut requires a displayed map surface  

> surface dust #1 size 30

> hide #1.60 models

> show #1.60 models

> close #1.60

> hide #1.59 models

> show #1.59 models

> hide #1.1 models

> show #1.1 models

> hide #1.2 models

> show #1.2 models

> hide #1.3 models

> show #1.3 models

> hide #1.3 models

> show #1.3 models

> hide #1.4 models

> show #1.4 models

> hide #1.2 models

> hide #1.1 models

> hide #1.3 models

> hide #1.4 models

> hide #1.5 models

> close #1.6-59

> show #1.1 models

> show #1.2 models

> show #1.3 models

> show #1.4 models

> show #1.5 models

Got 73 regions after grouping by connections  

> undo

[Repeated 2 time(s)]Ungrouped to 30 regions  

> undo

Ungrouped to 30 regions  
Got 83 regions after grouping by connections  
Got 73 regions after grouping by connections  
Got 71 regions after grouping by connections  
Ungrouped to 28 regions  
Segmenting average_ref_001_ite_0009.em scaled copy, density threshold 0.439833  
Only showing 60 of 83 regions.  
Showing 60 of 83 region surfaces  
322 watershed regions, grouped to 83 regions  
Showing average_ref_001_ite_0009 scaled copy.seg - 83 regions, 60 surfaces  
Got 77 regions after grouping by connections  
Got 73 regions after grouping by connections  
Got 71 regions after grouping by connections  
Ungrouped to 28 regions  

> ui tool show Segmentations

> ui view fourup

Traceback (most recent call last):  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 1580, in
_surfaceChosen  
self._update_position_label_text()  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
AttributeError: 'ScaledGrid' object has no attribute 'dicom_data'  
  
AttributeError: 'ScaledGrid' object has no attribute 'dicom_data'  
  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 1580, in
_surfaceChosen  
self._update_position_label_text()  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
AttributeError: 'ScaledGrid' object has no attribute 'dicom_data'  
  
AttributeError: 'ScaledGrid' object has no attribute 'dicom_data'  
  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 1580, in
_surfaceChosen  
self._update_position_label_text()  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
AttributeError: 'ScaledGrid' object has no attribute 'dicom_data'  
  
AttributeError: 'ScaledGrid' object has no attribute 'dicom_data'  
  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 1580, in
_surfaceChosen  
self._update_position_label_text()  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
AttributeError: 'ScaledGrid' object has no attribute 'dicom_data'  
  
AttributeError: 'ScaledGrid' object has no attribute 'dicom_data'  
  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 1580, in
_surfaceChosen  
self._update_position_label_text()  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
AttributeError: 'ScaledGrid' object has no attribute 'dicom_data'  
  
AttributeError: 'ScaledGrid' object has no attribute 'dicom_data'  
  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 1580, in
_surfaceChosen  
self._update_position_label_text()  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
AttributeError: 'ScaledGrid' object has no attribute 'dicom_data'  
  
AttributeError: 'ScaledGrid' object has no attribute 'dicom_data'  
  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 1072, in event  
self.enterEvent()  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 1096, in enterEvent  
self.resize3DSegmentationCursor()  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 1202, in
resize3DSegmentationCursor  
psize = self.view.pixel_size()  
^^^^^^^^^^^^^^^^^^^^^^  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/graphics/view.py", line 1084, in pixel_size  
return self.camera.view_width(p) / self.window_size[0]  
~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~  
ZeroDivisionError: division by zero  
  
ZeroDivisionError: division by zero  
  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/graphics/view.py", line 1084, in pixel_size  
return self.camera.view_width(p) / self.window_size[0]  
~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~  
  
See log for complete Python traceback.  
  

> segmentations create #2

Opened segmentation 1 of average_ref_001_ite_0009.em scaled as #8, grid size
64,64,64, pixel 1, shown at level 0.501, step 1, values float64  
Traceback (most recent call last):  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 742, in
_onSliderMoved  
self._update_position_label_text()  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
AttributeError: 'ScaledGrid' object has no attribute 'dicom_data'  
  
AttributeError: 'ScaledGrid' object has no attribute 'dicom_data'  
  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 742, in
_onSliderMoved  
self._update_position_label_text()  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
AttributeError: 'ScaledGrid' object has no attribute 'dicom_data'  
  
AttributeError: 'ScaledGrid' object has no attribute 'dicom_data'  
  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 742, in
_onSliderMoved  
self._update_position_label_text()  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
AttributeError: 'ScaledGrid' object has no attribute 'dicom_data'  
  
AttributeError: 'ScaledGrid' object has no attribute 'dicom_data'  
  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 742, in
_onSliderMoved  
self._update_position_label_text()  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
AttributeError: 'ScaledGrid' object has no attribute 'dicom_data'  
  
AttributeError: 'ScaledGrid' object has no attribute 'dicom_data'  
  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 742, in
_onSliderMoved  
self._update_position_label_text()  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
AttributeError: 'ScaledGrid' object has no attribute 'dicom_data'  
  
AttributeError: 'ScaledGrid' object has no attribute 'dicom_data'  
  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 742, in
_onSliderMoved  
self._update_position_label_text()  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
AttributeError: 'ScaledGrid' object has no attribute 'dicom_data'  
  
AttributeError: 'ScaledGrid' object has no attribute 'dicom_data'  
  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 742, in
_onSliderMoved  
self._update_position_label_text()  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
AttributeError: 'ScaledGrid' object has no attribute 'dicom_data'  
  
AttributeError: 'ScaledGrid' object has no attribute 'dicom_data'  
  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 742, in
_onSliderMoved  
self._update_position_label_text()  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
AttributeError: 'ScaledGrid' object has no attribute 'dicom_data'  
  
AttributeError: 'ScaledGrid' object has no attribute 'dicom_data'  
  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 742, in
_onSliderMoved  
self._update_position_label_text()  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
AttributeError: 'ScaledGrid' object has no attribute 'dicom_data'  
  
AttributeError: 'ScaledGrid' object has no attribute 'dicom_data'  
  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 742, in
_onSliderMoved  
self._update_position_label_text()  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
AttributeError: 'ScaledGrid' object has no attribute 'dicom_data'  
  
AttributeError: 'ScaledGrid' object has no attribute 'dicom_data'  
  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 742, in
_onSliderMoved  
self._update_position_label_text()  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
AttributeError: 'ScaledGrid' object has no attribute 'dicom_data'  
  
AttributeError: 'ScaledGrid' object has no attribute 'dicom_data'  
  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 742, in
_onSliderMoved  
self._update_position_label_text()  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
AttributeError: 'ScaledGrid' object has no attribute 'dicom_data'  
  
AttributeError: 'ScaledGrid' object has no attribute 'dicom_data'  
  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 742, in
_onSliderMoved  
self._update_position_label_text()  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
AttributeError: 'ScaledGrid' object has no attribute 'dicom_data'  
  
AttributeError: 'ScaledGrid' object has no attribute 'dicom_data'  
  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 742, in
_onSliderMoved  
self._update_position_label_text()  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
AttributeError: 'ScaledGrid' object has no attribute 'dicom_data'  
  
AttributeError: 'ScaledGrid' object has no attribute 'dicom_data'  
  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 742, in
_onSliderMoved  
self._update_position_label_text()  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
AttributeError: 'ScaledGrid' object has no attribute 'dicom_data'  
  
AttributeError: 'ScaledGrid' object has no attribute 'dicom_data'  
  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 742, in
_onSliderMoved  
self._update_position_label_text()  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
AttributeError: 'ScaledGrid' object has no attribute 'dicom_data'  
  
AttributeError: 'ScaledGrid' object has no attribute 'dicom_data'  
  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 742, in
_onSliderMoved  
self._update_position_label_text()  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
AttributeError: 'ScaledGrid' object has no attribute 'dicom_data'  
  
AttributeError: 'ScaledGrid' object has no attribute 'dicom_data'  
  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 742, in
_onSliderMoved  
self._update_position_label_text()  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
AttributeError: 'ScaledGrid' object has no attribute 'dicom_data'  
  
AttributeError: 'ScaledGrid' object has no attribute 'dicom_data'  
  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 742, in
_onSliderMoved  
self._update_position_label_text()  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
AttributeError: 'ScaledGrid' object has no attribute 'dicom_data'  
  
AttributeError: 'ScaledGrid' object has no attribute 'dicom_data'  
  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 742, in
_onSliderMoved  
self._update_position_label_text()  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
AttributeError: 'ScaledGrid' object has no attribute 'dicom_data'  
  
AttributeError: 'ScaledGrid' object has no attribute 'dicom_data'  
  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 742, in
_onSliderMoved  
self._update_position_label_text()  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
AttributeError: 'ScaledGrid' object has no attribute 'dicom_data'  
  
AttributeError: 'ScaledGrid' object has no attribute 'dicom_data'  
  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 742, in
_onSliderMoved  
self._update_position_label_text()  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
AttributeError: 'ScaledGrid' object has no attribute 'dicom_data'  
  
AttributeError: 'ScaledGrid' object has no attribute 'dicom_data'  
  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 742, in
_onSliderMoved  
self._update_position_label_text()  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
AttributeError: 'ScaledGrid' object has no attribute 'dicom_data'  
  
AttributeError: 'ScaledGrid' object has no attribute 'dicom_data'  
  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 742, in
_onSliderMoved  
self._update_position_label_text()  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
AttributeError: 'ScaledGrid' object has no attribute 'dicom_data'  
  
AttributeError: 'ScaledGrid' object has no attribute 'dicom_data'  
  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 742, in
_onSliderMoved  
self._update_position_label_text()  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
AttributeError: 'ScaledGrid' object has no attribute 'dicom_data'  
  
AttributeError: 'ScaledGrid' object has no attribute 'dicom_data'  
  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 742, in
_onSliderMoved  
self._update_position_label_text()  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
AttributeError: 'ScaledGrid' object has no attribute 'dicom_data'  
  
AttributeError: 'ScaledGrid' object has no attribute 'dicom_data'  
  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 764, in
_update_position_label_text  
dicom_data = self.view.drawing.parent.data.dicom_data  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
  
See log for complete Python traceback.  
  

> close #8

> segmentations create #2

Opened segmentation 1 of average_ref_001_ite_0009.em scaled as #8, grid size
64,64,64, pixel 1, shown at level 0.501, step 1, values float64  

> close #8

> close #4

> close #3

> close #2

> hide #1.3 models

> hide #1.5 models

> hide #1.6 models

> hide #1.7 models

> hide #1.8 models

> show #1.8 models

> show #1.7 models

> show #1.5 models

> show #1.3 models

> show #1.6 models

Select a density map in the Segment map field  
[Repeated 1 time(s)]

> open
> /ChangLab5-hd1/Sharon/Plasmodium/SG/Dynamo_Averaging/Data_set/catalogues/rhmembrane_nodup_Cylmask_180flip_run6/results/ite_0009/averages/average_ref_001_ite_0009.em
> format tom_em

Opened average_ref_001_ite_0009.em as #1, grid size 64,64,64, pixel 1, shown
at level 2.53, step 1, values float32  

> vop scale #1 f -1

Opened average_ref_001_ite_0009.em scaled as #2, grid size 64,64,64, pixel 1,
shown at step 1, values float32  

> volume #2 color #e5a50a

> volume #2 color #ffa348

> volume #2 color #ff7800

> volume #2 level 1.099

> volume #2 level 1.322

> ui mousemode right "map eraser"

> volume erase #2 center -5.5987,28.536,26.597 radius 7.7987

Opened average_ref_001_ite_0009.em scaled copy as #4, grid size 64,64,64,
pixel 1, shown at step 1, values float32  

> volume erase #4 center -5.6198,24.614,32.296 radius 7.776

> volume erase #4 center -3.937,18.376,20.739 radius 7.776

> volume erase #4 center -5.4129,20.995,25.915 radius 7.776

> volume erase #4 center 0.011372,29.208,18.129 radius 7.776

> volume erase #4 center -0.26589,2.0215,21.527 radius 7.776

> volume erase #4 center -4.5824,9.3151,28.857 radius 7.776

> volume erase #4 center -5.6243,36.492,25.542 radius 7.776

> volume erase #4 center -4.3534,16.471,24.04 radius 7.776

> ui mousemode right "map eraser"

> ui mousemode right "pick blobs"

> ui mousemode right "map eraser"

Traceback (most recent call last):  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/map/volume_viewer.py", line 2178, in mouseMoveEvent  
self._drag(event)  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/map/volume_viewer.py", line 2182, in _drag  
cb(event)  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/map/histogram.py", line 416, in move_marker_cb  
cb(m)  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 1889, in
moved_marker_cb  
self.plane_viewer.on_color_changed()  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 750, in
on_color_changed  
colors = self.view.drawing.parent.image_colors  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
AttributeError: 'NoneType' object has no attribute 'image_colors'  
  
AttributeError: 'NoneType' object has no attribute 'image_colors'  
  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 750, in
on_color_changed  
colors = self.view.drawing.parent.image_colors  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/map/volume_viewer.py", line 2178, in mouseMoveEvent  
self._drag(event)  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/map/volume_viewer.py", line 2182, in _drag  
cb(event)  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/map/histogram.py", line 416, in move_marker_cb  
cb(m)  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 1889, in
moved_marker_cb  
self.plane_viewer.on_color_changed()  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 750, in
on_color_changed  
colors = self.view.drawing.parent.image_colors  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
AttributeError: 'NoneType' object has no attribute 'image_colors'  
  
AttributeError: 'NoneType' object has no attribute 'image_colors'  
  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 750, in
on_color_changed  
colors = self.view.drawing.parent.image_colors  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/map/volume_viewer.py", line 2178, in mouseMoveEvent  
self._drag(event)  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/map/volume_viewer.py", line 2182, in _drag  
cb(event)  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/map/histogram.py", line 416, in move_marker_cb  
cb(m)  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 1889, in
moved_marker_cb  
self.plane_viewer.on_color_changed()  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 750, in
on_color_changed  
colors = self.view.drawing.parent.image_colors  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
AttributeError: 'NoneType' object has no attribute 'image_colors'  
  
AttributeError: 'NoneType' object has no attribute 'image_colors'  
  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 750, in
on_color_changed  
colors = self.view.drawing.parent.image_colors  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/map/volume_viewer.py", line 2178, in mouseMoveEvent  
self._drag(event)  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/map/volume_viewer.py", line 2182, in _drag  
cb(event)  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/map/histogram.py", line 416, in move_marker_cb  
cb(m)  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 1889, in
moved_marker_cb  
self.plane_viewer.on_color_changed()  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 750, in
on_color_changed  
colors = self.view.drawing.parent.image_colors  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
AttributeError: 'NoneType' object has no attribute 'image_colors'  
  
AttributeError: 'NoneType' object has no attribute 'image_colors'  
  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 750, in
on_color_changed  
colors = self.view.drawing.parent.image_colors  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/map/volume_viewer.py", line 2178, in mouseMoveEvent  
self._drag(event)  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/map/volume_viewer.py", line 2182, in _drag  
cb(event)  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/map/histogram.py", line 416, in move_marker_cb  
cb(m)  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 1889, in
moved_marker_cb  
self.plane_viewer.on_color_changed()  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 750, in
on_color_changed  
colors = self.view.drawing.parent.image_colors  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
AttributeError: 'NoneType' object has no attribute 'image_colors'  
  
AttributeError: 'NoneType' object has no attribute 'image_colors'  
  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 750, in
on_color_changed  
colors = self.view.drawing.parent.image_colors  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/map/volume_viewer.py", line 2178, in mouseMoveEvent  
self._drag(event)  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/map/volume_viewer.py", line 2182, in _drag  
cb(event)  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/map/histogram.py", line 416, in move_marker_cb  
cb(m)  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 1889, in
moved_marker_cb  
self.plane_viewer.on_color_changed()  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 750, in
on_color_changed  
colors = self.view.drawing.parent.image_colors  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
AttributeError: 'NoneType' object has no attribute 'image_colors'  
  
AttributeError: 'NoneType' object has no attribute 'image_colors'  
  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 750, in
on_color_changed  
colors = self.view.drawing.parent.image_colors  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/map/volume_viewer.py", line 2178, in mouseMoveEvent  
self._drag(event)  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/map/volume_viewer.py", line 2182, in _drag  
cb(event)  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/map/histogram.py", line 416, in move_marker_cb  
cb(m)  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 1889, in
moved_marker_cb  
self.plane_viewer.on_color_changed()  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 750, in
on_color_changed  
colors = self.view.drawing.parent.image_colors  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
AttributeError: 'NoneType' object has no attribute 'image_colors'  
  
AttributeError: 'NoneType' object has no attribute 'image_colors'  
  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 750, in
on_color_changed  
colors = self.view.drawing.parent.image_colors  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/map/volume_viewer.py", line 2178, in mouseMoveEvent  
self._drag(event)  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/map/volume_viewer.py", line 2182, in _drag  
cb(event)  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/map/histogram.py", line 416, in move_marker_cb  
cb(m)  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 1889, in
moved_marker_cb  
self.plane_viewer.on_color_changed()  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 750, in
on_color_changed  
colors = self.view.drawing.parent.image_colors  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
AttributeError: 'NoneType' object has no attribute 'image_colors'  
  
AttributeError: 'NoneType' object has no attribute 'image_colors'  
  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 750, in
on_color_changed  
colors = self.view.drawing.parent.image_colors  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/map/volume_viewer.py", line 2178, in mouseMoveEvent  
self._drag(event)  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/map/volume_viewer.py", line 2182, in _drag  
cb(event)  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/map/histogram.py", line 416, in move_marker_cb  
cb(m)  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 1889, in
moved_marker_cb  
self.plane_viewer.on_color_changed()  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 750, in
on_color_changed  
colors = self.view.drawing.parent.image_colors  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
AttributeError: 'NoneType' object has no attribute 'image_colors'  
  
AttributeError: 'NoneType' object has no attribute 'image_colors'  
  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 750, in
on_color_changed  
colors = self.view.drawing.parent.image_colors  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/map/volume_viewer.py", line 2178, in mouseMoveEvent  
self._drag(event)  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/map/volume_viewer.py", line 2182, in _drag  
cb(event)  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/map/histogram.py", line 416, in move_marker_cb  
cb(m)  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 1889, in
moved_marker_cb  
self.plane_viewer.on_color_changed()  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 750, in
on_color_changed  
colors = self.view.drawing.parent.image_colors  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
AttributeError: 'NoneType' object has no attribute 'image_colors'  
  
AttributeError: 'NoneType' object has no attribute 'image_colors'  
  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 750, in
on_color_changed  
colors = self.view.drawing.parent.image_colors  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/map/volume_viewer.py", line 2178, in mouseMoveEvent  
self._drag(event)  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/map/volume_viewer.py", line 2182, in _drag  
cb(event)  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/map/histogram.py", line 416, in move_marker_cb  
cb(m)  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 1889, in
moved_marker_cb  
self.plane_viewer.on_color_changed()  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 750, in
on_color_changed  
colors = self.view.drawing.parent.image_colors  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
AttributeError: 'NoneType' object has no attribute 'image_colors'  
  
AttributeError: 'NoneType' object has no attribute 'image_colors'  
  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 750, in
on_color_changed  
colors = self.view.drawing.parent.image_colors  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/map/volume_viewer.py", line 2178, in mouseMoveEvent  
self._drag(event)  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/map/volume_viewer.py", line 2182, in _drag  
cb(event)  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/map/histogram.py", line 416, in move_marker_cb  
cb(m)  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 1889, in
moved_marker_cb  
self.plane_viewer.on_color_changed()  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 750, in
on_color_changed  
colors = self.view.drawing.parent.image_colors  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
AttributeError: 'NoneType' object has no attribute 'image_colors'  
  
AttributeError: 'NoneType' object has no attribute 'image_colors'  
  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 750, in
on_color_changed  
colors = self.view.drawing.parent.image_colors  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/map/volume_viewer.py", line 2178, in mouseMoveEvent  
self._drag(event)  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/map/volume_viewer.py", line 2182, in _drag  
cb(event)  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/map/histogram.py", line 416, in move_marker_cb  
cb(m)  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 1889, in
moved_marker_cb  
self.plane_viewer.on_color_changed()  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 750, in
on_color_changed  
colors = self.view.drawing.parent.image_colors  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
AttributeError: 'NoneType' object has no attribute 'image_colors'  
  
AttributeError: 'NoneType' object has no attribute 'image_colors'  
  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 750, in
on_color_changed  
colors = self.view.drawing.parent.image_colors  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/map/volume_viewer.py", line 2178, in mouseMoveEvent  
self._drag(event)  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/map/volume_viewer.py", line 2182, in _drag  
cb(event)  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/map/histogram.py", line 416, in move_marker_cb  
cb(m)  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 1889, in
moved_marker_cb  
self.plane_viewer.on_color_changed()  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 750, in
on_color_changed  
colors = self.view.drawing.parent.image_colors  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
AttributeError: 'NoneType' object has no attribute 'image_colors'  
  
AttributeError: 'NoneType' object has no attribute 'image_colors'  
  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 750, in
on_color_changed  
colors = self.view.drawing.parent.image_colors  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/map/volume_viewer.py", line 2178, in mouseMoveEvent  
self._drag(event)  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/map/volume_viewer.py", line 2182, in _drag  
cb(event)  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/map/histogram.py", line 416, in move_marker_cb  
cb(m)  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 1889, in
moved_marker_cb  
self.plane_viewer.on_color_changed()  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 750, in
on_color_changed  
colors = self.view.drawing.parent.image_colors  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
AttributeError: 'NoneType' object has no attribute 'image_colors'  
  
AttributeError: 'NoneType' object has no attribute 'image_colors'  
  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 750, in
on_color_changed  
colors = self.view.drawing.parent.image_colors  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/map/volume_viewer.py", line 2178, in mouseMoveEvent  
self._drag(event)  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/map/volume_viewer.py", line 2182, in _drag  
cb(event)  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/map/histogram.py", line 416, in move_marker_cb  
cb(m)  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 1889, in
moved_marker_cb  
self.plane_viewer.on_color_changed()  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 750, in
on_color_changed  
colors = self.view.drawing.parent.image_colors  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
AttributeError: 'NoneType' object has no attribute 'image_colors'  
  
AttributeError: 'NoneType' object has no attribute 'image_colors'  
  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 750, in
on_color_changed  
colors = self.view.drawing.parent.image_colors  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/map/volume_viewer.py", line 2178, in mouseMoveEvent  
self._drag(event)  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/map/volume_viewer.py", line 2182, in _drag  
cb(event)  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/map/histogram.py", line 416, in move_marker_cb  
cb(m)  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 1889, in
moved_marker_cb  
self.plane_viewer.on_color_changed()  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 750, in
on_color_changed  
colors = self.view.drawing.parent.image_colors  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
AttributeError: 'NoneType' object has no attribute 'image_colors'  
  
AttributeError: 'NoneType' object has no attribute 'image_colors'  
  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 750, in
on_color_changed  
colors = self.view.drawing.parent.image_colors  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/map/volume_viewer.py", line 2178, in mouseMoveEvent  
self._drag(event)  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/map/volume_viewer.py", line 2182, in _drag  
cb(event)  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/map/histogram.py", line 416, in move_marker_cb  
cb(m)  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 1889, in
moved_marker_cb  
self.plane_viewer.on_color_changed()  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 750, in
on_color_changed  
colors = self.view.drawing.parent.image_colors  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
AttributeError: 'NoneType' object has no attribute 'image_colors'  
  
AttributeError: 'NoneType' object has no attribute 'image_colors'  
  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 750, in
on_color_changed  
colors = self.view.drawing.parent.image_colors  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/map/volume_viewer.py", line 2178, in mouseMoveEvent  
self._drag(event)  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/map/volume_viewer.py", line 2182, in _drag  
cb(event)  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/map/histogram.py", line 416, in move_marker_cb  
cb(m)  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 1889, in
moved_marker_cb  
self.plane_viewer.on_color_changed()  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 750, in
on_color_changed  
colors = self.view.drawing.parent.image_colors  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
AttributeError: 'NoneType' object has no attribute 'image_colors'  
  
AttributeError: 'NoneType' object has no attribute 'image_colors'  
  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 750, in
on_color_changed  
colors = self.view.drawing.parent.image_colors  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/map/volume_viewer.py", line 2178, in mouseMoveEvent  
self._drag(event)  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/map/volume_viewer.py", line 2182, in _drag  
cb(event)  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/map/histogram.py", line 416, in move_marker_cb  
cb(m)  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 1889, in
moved_marker_cb  
self.plane_viewer.on_color_changed()  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 750, in
on_color_changed  
colors = self.view.drawing.parent.image_colors  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
AttributeError: 'NoneType' object has no attribute 'image_colors'  
  
AttributeError: 'NoneType' object has no attribute 'image_colors'  
  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 750, in
on_color_changed  
colors = self.view.drawing.parent.image_colors  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/map/volume_viewer.py", line 2178, in mouseMoveEvent  
self._drag(event)  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/map/volume_viewer.py", line 2182, in _drag  
cb(event)  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/map/histogram.py", line 416, in move_marker_cb  
cb(m)  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 1889, in
moved_marker_cb  
self.plane_viewer.on_color_changed()  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 750, in
on_color_changed  
colors = self.view.drawing.parent.image_colors  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
AttributeError: 'NoneType' object has no attribute 'image_colors'  
  
AttributeError: 'NoneType' object has no attribute 'image_colors'  
  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 750, in
on_color_changed  
colors = self.view.drawing.parent.image_colors  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/map/volume_viewer.py", line 2178, in mouseMoveEvent  
self._drag(event)  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/map/volume_viewer.py", line 2182, in _drag  
cb(event)  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/map/histogram.py", line 416, in move_marker_cb  
cb(m)  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 1889, in
moved_marker_cb  
self.plane_viewer.on_color_changed()  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 750, in
on_color_changed  
colors = self.view.drawing.parent.image_colors  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
AttributeError: 'NoneType' object has no attribute 'image_colors'  
  
AttributeError: 'NoneType' object has no attribute 'image_colors'  
  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 750, in
on_color_changed  
colors = self.view.drawing.parent.image_colors  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/map/volume_viewer.py", line 2178, in mouseMoveEvent  
self._drag(event)  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/map/volume_viewer.py", line 2182, in _drag  
cb(event)  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/map/histogram.py", line 416, in move_marker_cb  
cb(m)  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 1889, in
moved_marker_cb  
self.plane_viewer.on_color_changed()  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 750, in
on_color_changed  
colors = self.view.drawing.parent.image_colors  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
AttributeError: 'NoneType' object has no attribute 'image_colors'  
  
AttributeError: 'NoneType' object has no attribute 'image_colors'  
  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 750, in
on_color_changed  
colors = self.view.drawing.parent.image_colors  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/map/volume_viewer.py", line 2178, in mouseMoveEvent  
self._drag(event)  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/map/volume_viewer.py", line 2182, in _drag  
cb(event)  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/map/histogram.py", line 416, in move_marker_cb  
cb(m)  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 1889, in
moved_marker_cb  
self.plane_viewer.on_color_changed()  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 750, in
on_color_changed  
colors = self.view.drawing.parent.image_colors  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
AttributeError: 'NoneType' object has no attribute 'image_colors'  
  
AttributeError: 'NoneType' object has no attribute 'image_colors'  
  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 750, in
on_color_changed  
colors = self.view.drawing.parent.image_colors  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/map/volume_viewer.py", line 2178, in mouseMoveEvent  
self._drag(event)  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/map/volume_viewer.py", line 2182, in _drag  
cb(event)  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/map/histogram.py", line 416, in move_marker_cb  
cb(m)  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 1889, in
moved_marker_cb  
self.plane_viewer.on_color_changed()  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 750, in
on_color_changed  
colors = self.view.drawing.parent.image_colors  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
AttributeError: 'NoneType' object has no attribute 'image_colors'  
  
AttributeError: 'NoneType' object has no attribute 'image_colors'  
  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 750, in
on_color_changed  
colors = self.view.drawing.parent.image_colors  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/map/volume_viewer.py", line 2178, in mouseMoveEvent  
self._drag(event)  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/map/volume_viewer.py", line 2182, in _drag  
cb(event)  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/map/histogram.py", line 416, in move_marker_cb  
cb(m)  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 1889, in
moved_marker_cb  
self.plane_viewer.on_color_changed()  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 750, in
on_color_changed  
colors = self.view.drawing.parent.image_colors  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
AttributeError: 'NoneType' object has no attribute 'image_colors'  
  
AttributeError: 'NoneType' object has no attribute 'image_colors'  
  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 750, in
on_color_changed  
colors = self.view.drawing.parent.image_colors  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/map/volume_viewer.py", line 2178, in mouseMoveEvent  
self._drag(event)  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/map/volume_viewer.py", line 2182, in _drag  
cb(event)  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/map/histogram.py", line 416, in move_marker_cb  
cb(m)  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 1889, in
moved_marker_cb  
self.plane_viewer.on_color_changed()  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 750, in
on_color_changed  
colors = self.view.drawing.parent.image_colors  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
AttributeError: 'NoneType' object has no attribute 'image_colors'  
  
AttributeError: 'NoneType' object has no attribute 'image_colors'  
  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 750, in
on_color_changed  
colors = self.view.drawing.parent.image_colors  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/map/volume_viewer.py", line 2178, in mouseMoveEvent  
self._drag(event)  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/map/volume_viewer.py", line 2182, in _drag  
cb(event)  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/map/histogram.py", line 416, in move_marker_cb  
cb(m)  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 1889, in
moved_marker_cb  
self.plane_viewer.on_color_changed()  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 750, in
on_color_changed  
colors = self.view.drawing.parent.image_colors  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
AttributeError: 'NoneType' object has no attribute 'image_colors'  
  
AttributeError: 'NoneType' object has no attribute 'image_colors'  
  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 750, in
on_color_changed  
colors = self.view.drawing.parent.image_colors  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/map/volume_viewer.py", line 2178, in mouseMoveEvent  
self._drag(event)  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/map/volume_viewer.py", line 2182, in _drag  
cb(event)  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/map/histogram.py", line 416, in move_marker_cb  
cb(m)  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 1889, in
moved_marker_cb  
self.plane_viewer.on_color_changed()  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 750, in
on_color_changed  
colors = self.view.drawing.parent.image_colors  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
AttributeError: 'NoneType' object has no attribute 'image_colors'  
  
AttributeError: 'NoneType' object has no attribute 'image_colors'  
  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 750, in
on_color_changed  
colors = self.view.drawing.parent.image_colors  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/map/volume_viewer.py", line 2178, in mouseMoveEvent  
self._drag(event)  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/map/volume_viewer.py", line 2182, in _drag  
cb(event)  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/map/histogram.py", line 416, in move_marker_cb  
cb(m)  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 1889, in
moved_marker_cb  
self.plane_viewer.on_color_changed()  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 750, in
on_color_changed  
colors = self.view.drawing.parent.image_colors  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
AttributeError: 'NoneType' object has no attribute 'image_colors'  
  
AttributeError: 'NoneType' object has no attribute 'image_colors'  
  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 750, in
on_color_changed  
colors = self.view.drawing.parent.image_colors  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/map/volume_viewer.py", line 2178, in mouseMoveEvent  
self._drag(event)  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/map/volume_viewer.py", line 2182, in _drag  
cb(event)  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/map/histogram.py", line 416, in move_marker_cb  
cb(m)  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 1889, in
moved_marker_cb  
self.plane_viewer.on_color_changed()  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 750, in
on_color_changed  
colors = self.view.drawing.parent.image_colors  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
AttributeError: 'NoneType' object has no attribute 'image_colors'  
  
AttributeError: 'NoneType' object has no attribute 'image_colors'  
  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 750, in
on_color_changed  
colors = self.view.drawing.parent.image_colors  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/map/volume_viewer.py", line 2178, in mouseMoveEvent  
self._drag(event)  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/map/volume_viewer.py", line 2182, in _drag  
cb(event)  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/map/histogram.py", line 416, in move_marker_cb  
cb(m)  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 1889, in
moved_marker_cb  
self.plane_viewer.on_color_changed()  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 750, in
on_color_changed  
colors = self.view.drawing.parent.image_colors  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
AttributeError: 'NoneType' object has no attribute 'image_colors'  
  
AttributeError: 'NoneType' object has no attribute 'image_colors'  
  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 750, in
on_color_changed  
colors = self.view.drawing.parent.image_colors  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
  
See log for complete Python traceback.  
  
Traceback (most recent call last):  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/map/volume_viewer.py", line 2185, in mouseReleaseEvent  
self._drag(event)  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/map/volume_viewer.py", line 2182, in _drag  
cb(event)  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/map/histogram.py", line 416, in move_marker_cb  
cb(m)  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 1889, in
moved_marker_cb  
self.plane_viewer.on_color_changed()  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 750, in
on_color_changed  
colors = self.view.drawing.parent.image_colors  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
AttributeError: 'NoneType' object has no attribute 'image_colors'  
  
AttributeError: 'NoneType' object has no attribute 'image_colors'  
  
File "/usr/lib/ucsf-chimerax/lib/python3.11/site-
packages/chimerax/segmentations/ui/orthoplanes.py", line 750, in
on_color_changed  
colors = self.view.drawing.parent.image_colors  
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  
  
See log for complete Python traceback.  
  




OpenGL version: 3.3.0 NVIDIA 550.163.01
OpenGL renderer: NVIDIA GeForce RTX 2080 Ti/PCIe/SSE2
OpenGL vendor: NVIDIA Corporation

Python: 3.11.4
Locale: en_US.UTF-8
Qt version: PyQt6 6.7.1, Qt 6.7.1
Qt runtime version: 6.7.3
Qt platform: xcb

XDG_SESSION_TYPE=x11
DESKTOP_SESSION=ubuntu
XDG_SESSION_DESKTOP=ubuntu
XDG_CURRENT_DESKTOP=ubuntu:GNOME
DISPLAY=:1
Manufacturer: Dell Inc.
Model: Precision 7820 Tower
OS: Ubuntu 22.04
Architecture: 64bit ELF
Virtual Machine: none
CPU: 8 Intel(R) Xeon(R) Gold 6144 CPU @ 3.50GHz
Cache Size: 25344 KB
Memory:
	               total        used        free      shared  buff/cache   available
	Mem:            92Gi        27Gi        10Gi       299Mi        55Gi        64Gi
	Swap:          2.0Gi       1.1Gi       892Mi

Graphics:
	0000:17:00.0 VGA compatible controller [0300]: NVIDIA Corporation TU102 [GeForce RTX 2080 Ti Rev. A] [10de:1e07] (rev a1)	
	Subsystem: ZOTAC International (MCO) Ltd. TU102 [GeForce RTX 2080 Ti Rev. A] [19da:6513]	
	Kernel driver in use: nvidia

Installed Packages:
    alabaster: 1.0.0
    anyio: 4.7.0
    appdirs: 1.4.4
    asttokens: 3.0.0
    auditwheel: 6.1.0
    babel: 2.16.0
    beautifulsoup4: 4.12.3
    blockdiag: 3.0.0
    blosc2: 3.0.0
    build: 1.2.1
    certifi: 2024.8.30
    cftime: 1.6.4.post1
    charset-normalizer: 3.4.0
    ChimeraX-AddCharge: 1.5.18
    ChimeraX-AddH: 2.2.6
    ChimeraX-AlignmentAlgorithms: 2.0.2
    ChimeraX-AlignmentHdrs: 3.5
    ChimeraX-AlignmentMatrices: 2.1
    ChimeraX-Alignments: 2.16.1
    ChimeraX-AlphaFold: 1.0.1
    ChimeraX-AltlocExplorer: 1.1.2
    ChimeraX-AmberInfo: 1.0
    ChimeraX-Arrays: 1.1
    ChimeraX-Atomic: 1.58.8
    ChimeraX-AtomicLibrary: 14.1.11
    ChimeraX-AtomSearch: 2.0.1
    ChimeraX-AxesPlanes: 2.4
    ChimeraX-BasicActions: 1.1.2
    ChimeraX-BILD: 1.0
    ChimeraX-BlastProtein: 3.0.0
    ChimeraX-BondRot: 2.0.4
    ChimeraX-BugReporter: 1.0.1
    ChimeraX-BuildStructure: 2.13.1
    ChimeraX-Bumps: 1.0
    ChimeraX-BundleBuilder: 1.4.0
    ChimeraX-ButtonPanel: 1.0.1
    ChimeraX-CageBuilder: 1.0.1
    ChimeraX-CellPack: 1.0
    ChimeraX-Centroids: 1.4
    ChimeraX-ChangeChains: 1.1
    ChimeraX-CheckWaters: 1.4
    ChimeraX-ChemGroup: 2.0.1
    ChimeraX-Clashes: 2.3
    ChimeraX-ColorActions: 1.0.5
    ChimeraX-ColorGlobe: 1.0
    ChimeraX-ColorKey: 1.5.6
    ChimeraX-CommandLine: 1.2.5
    ChimeraX-ConnectStructure: 2.0.1
    ChimeraX-Contacts: 1.0.1
    ChimeraX-Core: 1.9
    ChimeraX-CoreFormats: 1.2
    ChimeraX-coulombic: 1.4.4
    ChimeraX-Crosslinks: 1.0
    ChimeraX-Crystal: 1.0
    ChimeraX-CrystalContacts: 1.0.1
    ChimeraX-DataFormats: 1.2.3
    ChimeraX-Dicom: 1.2.6
    ChimeraX-DistMonitor: 1.4.2
    ChimeraX-DockPrep: 1.1.3
    ChimeraX-Dssp: 2.0
    ChimeraX-EMDB-SFF: 1.0
    ChimeraX-ESMFold: 1.0
    ChimeraX-FileHistory: 1.0.1
    ChimeraX-FunctionKey: 1.0.1
    ChimeraX-Geometry: 1.3
    ChimeraX-gltf: 1.0
    ChimeraX-Graphics: 1.4.1
    ChimeraX-Hbonds: 2.5
    ChimeraX-Help: 1.3
    ChimeraX-HKCage: 1.3
    ChimeraX-IHM: 1.1
    ChimeraX-ImageFormats: 1.2
    ChimeraX-IMOD: 1.0
    ChimeraX-IO: 1.0.3
    ChimeraX-ItemsInspection: 1.0.1
    ChimeraX-IUPAC: 1.0
    ChimeraX-KVFinder: 1.2.1
    ChimeraX-Label: 1.1.14
    ChimeraX-LinuxSupport: 1.0.1
    ChimeraX-ListInfo: 1.2.2
    ChimeraX-Log: 1.2
    ChimeraX-LookingGlass: 1.1
    ChimeraX-Maestro: 1.9.1
    ChimeraX-Map: 1.3
    ChimeraX-MapData: 2.0
    ChimeraX-MapEraser: 1.0.1
    ChimeraX-MapFilter: 2.0.1
    ChimeraX-MapFit: 2.0
    ChimeraX-MapSeries: 2.1.1
    ChimeraX-Markers: 1.0.1
    ChimeraX-Mask: 1.0.2
    ChimeraX-MatchMaker: 2.1.6
    ChimeraX-MCopy: 1.0
    ChimeraX-MDcrds: 2.7.2
    ChimeraX-MedicalToolbar: 1.1
    ChimeraX-Meeting: 1.0.1
    ChimeraX-MLP: 1.1.1
    ChimeraX-mmCIF: 2.14.2
    ChimeraX-MMTF: 2.2
    ChimeraX-ModelArchive: 1.0
    ChimeraX-Modeller: 1.5.18
    ChimeraX-ModelPanel: 1.5
    ChimeraX-ModelSeries: 1.0.1
    ChimeraX-Mol2: 2.0.3
    ChimeraX-Mole: 1.0
    ChimeraX-Morph: 1.0.2
    ChimeraX-MouseModes: 1.2
    ChimeraX-Movie: 1.0
    ChimeraX-MutationScores: 1.0
    ChimeraX-Neuron: 1.0
    ChimeraX-Nifti: 1.2
    ChimeraX-NMRSTAR: 1.0.2
    ChimeraX-NRRD: 1.2
    ChimeraX-Nucleotides: 2.0.3
    ChimeraX-OpenCommand: 1.14
    ChimeraX-OrthoPick: 1.0.1
    ChimeraX-PDB: 2.7.6
    ChimeraX-PDBBio: 1.0.1
    ChimeraX-PDBLibrary: 1.0.4
    ChimeraX-PDBMatrices: 1.0
    ChimeraX-PickBlobs: 1.0.1
    ChimeraX-Positions: 1.0
    ChimeraX-PresetMgr: 1.1.2
    ChimeraX-PubChem: 2.2
    ChimeraX-ReadPbonds: 1.0.1
    ChimeraX-Registration: 1.1.2
    ChimeraX-RemoteControl: 1.0
    ChimeraX-RenderByAttr: 1.6.2
    ChimeraX-RenumberResidues: 1.1
    ChimeraX-ResidueFit: 1.0.1
    ChimeraX-RestServer: 1.3.1
    ChimeraX-RNALayout: 1.0
    ChimeraX-RotamerLibMgr: 4.0
    ChimeraX-RotamerLibsDunbrack: 2.0
    ChimeraX-RotamerLibsDynameomics: 2.0
    ChimeraX-RotamerLibsRichardson: 2.0
    ChimeraX-SaveCommand: 1.5.1
    ChimeraX-SchemeMgr: 1.0
    ChimeraX-SDF: 2.0.2
    ChimeraX-Segger: 1.0
    ChimeraX-Segment: 1.0.1
    ChimeraX-Segmentations: 3.5.6
    ChimeraX-SelInspector: 1.0
    ChimeraX-SeqView: 2.14
    ChimeraX-Shape: 1.0.1
    ChimeraX-Shell: 1.0.1
    ChimeraX-Shortcuts: 1.2.0
    ChimeraX-ShowSequences: 1.0.3
    ChimeraX-SideView: 1.0.1
    ChimeraX-SimilarStructures: 1.0.1
    ChimeraX-Smiles: 2.1.2
    ChimeraX-SmoothLines: 1.0
    ChimeraX-SpaceNavigator: 1.0
    ChimeraX-StdCommands: 1.18.1
    ChimeraX-STL: 1.0.1
    ChimeraX-Storm: 1.0
    ChimeraX-StructMeasure: 1.2.1
    ChimeraX-Struts: 1.0.1
    ChimeraX-Surface: 1.0.1
    ChimeraX-SwapAA: 2.0.1
    ChimeraX-SwapRes: 2.5
    ChimeraX-TapeMeasure: 1.0
    ChimeraX-TaskManager: 1.0
    ChimeraX-Test: 1.0
    ChimeraX-Toolbar: 1.2.3
    ChimeraX-ToolshedUtils: 1.2.4
    ChimeraX-Topography: 1.0
    ChimeraX-ToQuest: 1.0
    ChimeraX-Tug: 1.0.1
    ChimeraX-UI: 1.41
    ChimeraX-Umap: 1.0
    ChimeraX-uniprot: 2.3.1
    ChimeraX-UnitCell: 1.0.1
    ChimeraX-ViewDockX: 1.4.4
    ChimeraX-VIPERdb: 1.0
    ChimeraX-Vive: 1.1
    ChimeraX-VolumeMenu: 1.0.1
    ChimeraX-vrml: 1.0
    ChimeraX-VTK: 1.0
    ChimeraX-WavefrontOBJ: 1.0
    ChimeraX-WebCam: 1.0.2
    ChimeraX-WebServices: 1.1.4
    ChimeraX-Zone: 1.0.1
    colorama: 0.4.6
    comm: 0.2.2
    contourpy: 1.3.1
    cxservices: 1.2.3
    cycler: 0.12.1
    Cython: 3.0.10
    debugpy: 1.8.9
    decorator: 5.1.1
    distro: 1.9.0
    docutils: 0.21.2
    executing: 2.1.0
    filelock: 3.15.4
    fonttools: 4.55.3
    funcparserlib: 2.0.0a0
    glfw: 2.8.0
    grako: 3.16.5
    h11: 0.14.0
    h5py: 3.12.1
    html2text: 2024.2.26
    httpcore: 1.0.7
    httpx: 0.28.1
    idna: 3.10
    ihm: 1.3
    imagecodecs: 2024.6.1
    imagesize: 1.4.1
    ipykernel: 6.29.5
    ipython: 8.26.0
    ipywidgets: 8.1.5
    jedi: 0.19.1
    Jinja2: 3.1.4
    jupyter_client: 8.6.2
    jupyter_core: 5.7.2
    jupyterlab_widgets: 3.0.13
    kiwisolver: 1.4.7
    line_profiler: 4.1.3
    lxml: 5.2.2
    lz4: 4.3.3
    MarkupSafe: 3.0.2
    matplotlib: 3.9.2
    matplotlib-inline: 0.1.7
    msgpack: 1.0.8
    ndindex: 1.9.2
    nest-asyncio: 1.6.0
    netCDF4: 1.6.5
    networkx: 3.3
    nibabel: 5.2.0
    nptyping: 2.5.0
    numexpr: 2.10.2
    numpy: 1.26.4
    openvr: 1.26.701
    packaging: 23.2
    ParmEd: 4.2.2
    parso: 0.8.4
    pep517: 0.13.1
    pexpect: 4.9.0
    pillow: 10.4.0
    pip: 24.2
    pkginfo: 1.11.1
    platformdirs: 4.3.6
    prompt_toolkit: 3.0.48
    psutil: 6.0.0
    ptyprocess: 0.7.0
    pure_eval: 0.2.3
    py-cpuinfo: 9.0.0
    pycollada: 0.8
    pydicom: 2.4.4
    pyelftools: 0.31
    Pygments: 2.18.0
    pynmrstar: 3.3.4
    pynrrd: 1.0.0
    PyOpenGL: 3.1.7
    PyOpenGL-accelerate: 3.1.7
    pyopenxr: 1.0.3401
    pyparsing: 3.2.0
    pyproject_hooks: 1.2.0
    PyQt6-commercial: 6.7.1
    PyQt6-Qt6: 6.7.3
    PyQt6-WebEngine-commercial: 6.7.0
    PyQt6-WebEngine-Qt6: 6.7.3
    PyQt6-WebEngineSubwheel-Qt6: 6.7.3
    PyQt6_sip: 13.8.0
    python-dateutil: 2.9.0.post0
    pytz: 2024.2
    pyzmq: 26.2.0
    qtconsole: 5.5.2
    QtPy: 2.4.2
    qtshim: 1.0
    RandomWords: 0.4.0
    requests: 2.32.3
    scipy: 1.14.0
    setuptools: 72.1.0
    sfftk-rw: 0.8.1
    six: 1.16.0
    sniffio: 1.3.1
    snowballstemmer: 2.2.0
    sortedcontainers: 2.4.0
    soupsieve: 2.6
    Sphinx: 8.0.2
    sphinx-autodoc-typehints: 2.2.3
    sphinxcontrib-applehelp: 2.0.0
    sphinxcontrib-blockdiag: 3.0.0
    sphinxcontrib-devhelp: 2.0.0
    sphinxcontrib-htmlhelp: 2.1.0
    sphinxcontrib-jsmath: 1.0.1
    sphinxcontrib-qthelp: 2.0.0
    sphinxcontrib-serializinghtml: 2.0.0
    stack-data: 0.6.3
    superqt: 0.6.3
    tables: 3.10.1
    tcia_utils: 1.5.1
    tifffile: 2024.7.24
    tinyarray: 1.2.4
    tornado: 6.4.2
    traitlets: 5.14.3
    typing_extensions: 4.12.2
    tzdata: 2024.2
    urllib3: 2.2.3
    wcwidth: 0.2.13
    webcolors: 24.6.0
    wheel: 0.43.0
    wheel-filename: 1.4.1
    widgetsnbextension: 4.0.13