The following bug report has been submitted:
Platform: macOS-14.6.1-x86_64-i386-64bit
ChimeraX Version: 1.7.1 (2024-01-23 01:58:08 UTC)
Description
Last time you used ChimeraX it crashed.
Please describe steps that led to the crash here.
Fatal Python error: Aborted
Current thread 0x00007ff859bffdc0 (most recent call first):
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/graphics/opengl.py", line 2772 in draw_elements
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/graphics/drawing.py", line 1749 in draw
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/graphics/drawing.py", line 852 in _draw_geometry
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/graphics/drawing.py", line 787 in draw_self
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/graphics/drawing.py", line 780 in draw
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/graphics/drawing.py", line 1567 in _draw_multiple
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/graphics/drawing.py", line 1554 in draw_opaque
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/graphics/view.py", line 258 in _draw_scene
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/graphics/view.py", line 188 in draw
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/sideview/tool.py", line 288 in render
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/sideview/tool.py", line 113 in _redraw
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/core/triggerset.py", line 149 in invoke
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/core/triggerset.py", line 248 in _activate
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/core/triggerset.py", line 217 in activate
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/core/triggerset.py", line 393 in activate_trigger
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/core/updateloop.py", line 100 in draw_new_frame
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/core/updateloop.py", line 150 in _redraw_timer_callback
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/ui/gui.py", line 275 in event_loop
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/core/__main__.py", line 918 in init
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/core/__main__.py", line 1069 in
File "", line 88 in _run_code
File "", line 198 in _run_module_as_main
Extension modules: chimerax.arrays._arrays, numpy.core._multiarray_umath, numpy.core._multiarray_tests, numpy.linalg._umath_linalg, numpy.fft._pocketfft_internal, numpy.random._common, numpy.random.bit_generator, numpy.random._bounded_integers, numpy.random._mt19937, numpy.random.mtrand, numpy.random._philox, numpy.random._pcg64, numpy.random._sfc64, numpy.random._generator, chimerax.geometry._geometry, PyQt6.QtCore, PyQt6.QtGui, PyQt6.QtWidgets, PyQt6.QtWebChannel, PyQt6.QtNetwork, PyQt6.QtWebEngineCore, PyQt6.QtPrintSupport, PyQt6.QtWebEngineWidgets, chimerax.atomic_lib._load_libs, tinyarray, chimerax.atomic.cymol, chimerax.atomic.cytmpl, chimerax.pdb_lib._load_libs, chimerax.surface._surface, chimerax.map._map, charset_normalizer.md, PIL._imaging, matplotlib._c_internal_utils, matplotlib._path, kiwisolver._cext, matplotlib._image, PyQt6.QtOpenGL, PyQt6.QtOpenGLWidgets, OpenGL_accelerate.errorchecker, OpenGL_accelerate.wrapper, OpenGL_accelerate.formathandler, OpenGL_accelerate.arraydatatype, OpenGL_accelerate.latebind, OpenGL_accelerate.vbo, chimerax.core._mac_util, OpenGL_accelerate.numpy_formathandler, OpenGL_accelerate.nones_formathandler, PIL._imagingmath, chimerax.graphics._graphics, chimerax.pdb._pdbio, chimerax.atomic._ribbons, chimerax.mmcif._mmcif, chimerax.mmcif.mmcif (total: 53)
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{
"uptime" : 240000,
"procRole" : "Background",
"version" : 2,
"userID" : 1092222915,
"deployVersion" : 210,
"modelCode" : "MacBookPro16,2",
"coalitionID" : 762,
"osVersion" : {
"train" : "macOS 14.6.1",
"build" : "23G93",
"releaseType" : "User"
},
"captureTime" : "2025-04-06 18:47:41.4911 +0100",
"codeSigningMonitor" : 0,
"incident" : "9D1DB591-0284-4313-A2D6-1A7166E4CEEB",
"pid" : 29210,
"cpuType" : "X86-64",
"roots_installed" : 0,
"bug_type" : "309",
"procLaunch" : "2025-04-06 18:11:26.0730 +0100",
"procStartAbsTime" : 247444790899175,
"procExitAbsTime" : 249620300830559,
"procName" : "ChimeraX",
"procPath" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/MacOS\/ChimeraX",
"bundleInfo" : {"CFBundleShortVersionString":"1.7.1","CFBundleVersion":"1.7.1.0","CFBundleIdentifier":"edu.ucsf.cgl.ChimeraX"},
"storeInfo" : {"deviceIdentifierForVendor":"A35EC828-56C9-5863-AA25-70DC51F3490F","thirdParty":true},
"parentProc" : "launchd",
"parentPid" : 1,
"coalitionName" : "edu.ucsf.cgl.ChimeraX",
"crashReporterKey" : "01A2FF72-CFA6-DA31-C065-9CAF6B0693C7",
"lowPowerMode" : 1,
"codeSigningID" : "edu.ucsf.cgl.ChimeraX",
"codeSigningTeamID" : "LWV8X224YF",
"codeSigningFlags" : 570491649,
"codeSigningValidationCategory" : 6,
"codeSigningTrustLevel" : 4294967295,
"wakeTime" : 2684,
"bridgeVersion" : {"build":"21P6074","train":"8.6"},
"sleepWakeUUID" : "E6459EF3-21B3-4558-ABCA-D725A036D570",
"sip" : "enabled",
"exception" : {"codes":"0x0000000000000000, 0x0000000000000000","rawCodes":[0,0],"type":"EXC_CRASH","signal":"SIGABRT"},
"termination" : {"flags":0,"code":6,"namespace":"SIGNAL","indicator":"Abort trap: 6","byProc":"ChimeraX","byPid":29210},
"ktriageinfo" : "VM - (arg = 0x3) mach_vm_allocate_kernel failed within call to vm_map_enter\nVM - (arg = 0x3) mach_vm_allocate_kernel failed within call to vm_map_enter\nVM - (arg = 0x3) mach_vm_allocate_kernel failed within call to vm_map_enter\nVM - (arg = 0x3) mach_vm_allocate_kernel failed within call to vm_map_enter\nVM - (arg = 0x3) mach_vm_allocate_kernel failed within call to vm_map_enter\n",
"asi" : {"libsystem_c.dylib":["abort() called"]},
"asiSignatures" : ["Graphics hardware encountered an error and was reset: 0x00000002\n"],
"extMods" : {"caller":{"thread_create":0,"thread_set_state":0,"task_for_pid":0},"system":{"thread_create":0,"thread_set_state":0,"task_for_pid":0},"targeted":{"thread_create":0,"thread_set_state":0,"task_for_pid":0},"warnings":0},
"faultingThread" : 0,
"threads" : 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"path" : "\/System\/Library\/Frameworks\/CoreFoundation.framework\/Versions\/A\/CoreFoundation",
"name" : "CoreFoundation",
"CFBundleVersion" : "2602"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 140703683870720,
"CFBundleShortVersionString" : "2.1.1",
"CFBundleIdentifier" : "com.apple.HIToolbox",
"size" : 2732020,
"uuid" : "2aa738bf-9f72-3227-8bba-7eae7b9f080b",
"path" : "\/System\/Library\/Frameworks\/Carbon.framework\/Versions\/A\/Frameworks\/HIToolbox.framework\/Versions\/A\/HIToolbox",
"name" : "HIToolbox"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 140703562498048,
"CFBundleShortVersionString" : "6.9",
"CFBundleIdentifier" : "com.apple.AppKit",
"size" : 21172216,
"uuid" : "d0e19a37-f677-32b5-b3d2-005e60b90f7f",
"path" : "\/System\/Library\/Frameworks\/AppKit.framework\/Versions\/C\/AppKit",
"name" : "AppKit",
"CFBundleVersion" : "2487.70.105"
},
{
"source" : "P",
"arch" : "x86_64",
"base" : 140703501033472,
"size" : 591904,
"uuid" : "18f658dd-20f3-324d-b7ac-8a9c60b574b3",
"path" : "\/usr\/lib\/dyld",
"name" : "dyld"
}
],
"sharedCache" : {
"base" : 140703500337152,
"size" : 25769803776,
"uuid" : "b8509d0f-c366-3716-9a03-efa00b40318a"
},
"vmSummary" : "ReadOnly portion of Libraries: Total=1.3G resident=0K(0%) swapped_out_or_unallocated=1.3G(100%)\nWritable regions: Total=1.9G written=0K(0%) resident=0K(0%) swapped_out=0K(0%) unallocated=1.9G(100%)\n\n VIRTUAL REGION \nREGION TYPE SIZE COUNT (non-coalesced) \n=========== ======= ======= \nAccelerate framework 256K 2 \nActivity Tracing 256K 1 \nCG image 200K 29 \nColorSync 248K 30 \nCoreAnimation 924K 125 \nCoreGraphics 16K 3 \nCoreServices 148K 1 \nCoreUI image data 2588K 32 \nFoundation 36K 2 \nKernel Alloc Once 8K 1 \nMALLOC 1.4G 742 \nMALLOC guard page 32K 8 \nMALLOC_LARGE (reserved) 384K 1 reserved VM address space (unallocated)\nMach message 16K 3 \nOpenGL GLSL 384K 4 \nSTACK GUARD 88K 22 \nStack 146.7M 23 \nStack Guard 56.0M 1 \nVM_ALLOCATE 283.2M 196 \nVM_ALLOCATE (reserved) 32.0M 1 reserved VM address space (unallocated)\n__CTF 824 1 \n__DATA 57.1M 833 \n__DATA_CONST 51.1M 464 \n__DATA_DIRTY 1852K 237 \n__FONT_DATA 2352 1 \n__GLSLBUILTINS 5174K 1 \n__INFO_FILTER 8 1 \n__LINKEDIT 211.9M 146 \n__OBJC_RO 71.9M 1 \n__OBJC_RW 2201K 2 \n__TEXT 1.1G 840 \ndyld private memory 160K 2 \nmapped file 266.8M 79 \nshared memory 3016K 34 \n=========== ======= ======= \nTOTAL 3.6G 3869 \nTOTAL, minus reserved VM space 3.6G 3869 \n",
"legacyInfo" : {
"threadTriggered" : {
"name" : "CrBrowserMain",
"queue" : "com.apple.main-thread"
}
},
"logWritingSignature" : "66bca9eb05257c1c5155760323853cc08505663f",
"trialInfo" : {
"rollouts" : [
{
"rolloutId" : "67d07cd6a7affa169ae21f45",
"factorPackIds" : {
},
"deploymentId" : 240000002
},
{
"rolloutId" : "6434420a89ec2e0a7a38bf5a",
"factorPackIds" : {
},
"deploymentId" : 240000011
}
],
"experiments" : [
]
}
}
===== Log before crash start =====
Startup Messages
---
note | available bundle cache has not been initialized yet
UCSF ChimeraX version: 1.7.1 (2024-01-23)
© 2016-2023 Regents of the University of California. All rights reserved.
How to cite UCSF ChimeraX
> open
> /Users/singerm/Desktop/RNA_structure/Maps/use/cryosparc_P3_J375__localfilter_zflip.mrc
Opened cryosparc_P3_J375__localfilter_zflip.mrc as #1, grid size 400,400,400,
pixel 0.95, shown at level 0.104, step 2, values float32
> volume #1 level 0.15
> open
> /Users/singerm/Desktop/RNA_structure/Maps/locres/both_sides_cryosparc_P3_J486_map_locres_Zflip.mrc
File size 1024 too small for grid size (400,400,400)
> open /Users/singerm/Downloads/cryosparc_P3_J486_map_locres.mrc
Opened cryosparc_P3_J486_map_locres.mrc as #2, grid size 400,400,400, pixel
0.95, shown at level 7.75, step 2, values float32
> volume flip #2
Opened cryosparc_P3_J486_map_locres.mrc z flip as #3, grid size 400,400,400,
pixel 0.95, shown at step 1, values float32
> set bgColor white
> view #1 clip false
> hide #!3 models
> ui tool show "Surface Color"
> color radial #1.1 palette #ff0000:#ffffff:#0000ff
> key red-white-blue :217 :323 :429 showTool true
> ui mousemode right "color key"
> ui mousemode right translate
> color sample #1.1 map #3 palette
> 2.9,#0000ff:3.2,#00ffff:3.5,#00ff00:4.5,#ffff00:6,#ff0000
Map values for surface "surface": minimum 2.327, mean 3.707, maximum 6.118
> key rainbow :2.9 :3.2 :3.5 :4.5 :6.0 showTool true
> ui mousemode right "color key"
> ui mousemode right translate
> key rainbow :2.9 :3.2 :3.5 :4.5 :6.0 showTool true
> ui mousemode right "color key"
> key size 0.24000,0.05000
> key size 0.25000,0.05000
> key size 0.26000,0.05000
> key size 0.27000,0.05000
> key size 0.28000,0.05000
> key size 0.29000,0.05000
> key size 0.30000,0.05000
> key size 0.30000,0.04000
> key size 0.30000,0.03000
> key size 0.30000,0.02000
> key size 0.31000,0.02000
Key is partially or completely offscreen
> key size 0.32000,0.02000
Key is partially or completely offscreen
> key size 0.33000,0.02000
Key is partially or completely offscreen
> key size 0.34000,0.02000
Key is partially or completely offscreen
> key size 0.35000,0.02000
Key is partially or completely offscreen
> key size 0.36000,0.02000
Key is partially or completely offscreen
> key size 0.37000,0.02000
Key is partially or completely offscreen
> key size 0.38000,0.02000
Key is partially or completely offscreen
> key size 0.39000,0.02000
Key is partially or completely offscreen
> key size 0.40000,0.02000
Key is partially or completely offscreen
> key size 0.41000,0.02000
Key is partially or completely offscreen
> key size 0.40000,0.02000
Key is partially or completely offscreen
> key pos 0.71000,0.08000
Key is partially or completely offscreen
> key pos 0.70000,0.08000
Key is partially or completely offscreen
> key pos 0.69000,0.08000
Key is partially or completely offscreen
> key pos 0.68000,0.08000
Key is partially or completely offscreen
> key pos 0.67000,0.08000
Key is partially or completely offscreen
> key pos 0.66000,0.08000
Key is partially or completely offscreen
> key pos 0.65000,0.08000
Key is partially or completely offscreen
> key pos 0.64000,0.08000
Key is partially or completely offscreen
> key pos 0.63000,0.08000
Key is partially or completely offscreen
> key pos 0.62000,0.08000
Key is partially or completely offscreen
> key pos 0.61000,0.08000
Key is partially or completely offscreen
> key pos 0.60000,0.08000
> key pos 0.59000,0.08000
> key pos 0.58000,0.08000
> key pos 0.57000,0.08000
> ui mousemode right translate
> open
> /Users/singerm/Desktop/RNA_structure/Maps/348/cryosparc_P3_J355__localfilter_protointasome_zflip.mrc
Opened cryosparc_P3_J355__localfilter_protointasome_zflip.mrc as #5, grid size
400,400,400, pixel 0.95, shown at level 0.032, step 2, values float32
> close #2
> volume #5 level 0.15
> open
> /Users/singerm/Desktop/RNA_structure/Maps/locres/one_side_cryosparc_P3_J472_map_locres.mrc
Opened one_side_cryosparc_P3_J472_map_locres.mrc as #2, grid size 400,400,400,
pixel 0.95, shown at level 4.29, step 2, values float32
> volume flip #5
Opened cryosparc_P3_J355__localfilter_protointasome_zflip.mrc z flip as #6,
grid size 400,400,400, pixel 0.95, shown at step 1, values float32
> hide #!6 models
> show #!6 models
> hide #!6 models
> show #!5 models
> hide #!5 models
> close #6
> volume flip #2
Opened one_side_cryosparc_P3_J472_map_locres.mrc z flip as #6, grid size
400,400,400, pixel 0.95, shown at step 1, values float32
> hide #!6 models
> color sample #5.1 map #6 palette
> 2.9,#0000ff:3.2,#00ffff:3.5,#00ff00:4.5,#ffff00:6,#ff0000
Map values for surface "surface": minimum 1.29, mean 3.238, maximum 6.532
> hide #4 models
> hide #!1 models
> show #!1 models
> hide #!1 models
> show #4 models
> hide #4 models
> show #!5 models
> show #4 models
> hide #!5 models
> show #!5 models
> show #!1 models
> hide #!5 models
> show #!5 models
> close #2
> hide #4 models
> show #4 models
> view #1 clip false
> hide #!1 models
> view #1 clip false
No displayed objects specified.
> view #5 clip false
> save pic1.png format png supersample 3
> hide #!5 models
> show #!1 models
> save pic2.png format png supersample 3
> undo
> show #!5 models
> save pic2.png format png supersample 3
> cd /Users/singerm/Desktop/RNA_structure/Figure_prep
Current working directory is: /Users/singerm/Desktop/RNA_structure/Figure_prep
> view #5 clip false
> volume #5 step 1
> volume #1 step 1
> view #5 clip false
> save pic2.png format png supersample 3
> hide #!5 models
> show #!1 models
> save pic1.png format png supersample 3
> show #!5 models
> hide #!5 models
> show #!5 models
> ui tool show "Side View"
> color sample #5.1.1 map #6 palette
> 2.9,#0000ff:3.2,#00ffff:3.5,#00ff00:4.5,#ffff00:6,#ff0000
Map values for surface "cap near": minimum 2.932, mean 3.756, maximum 6.263
> color sample #5.1.1 map #6 palette
> 2.9,#0000ff:3.2,#00ffff:3.5,#00ff00:4.5,#ffff00:6,#ff0000
Map values for surface "cap near": minimum 2.932, mean 3.756, maximum 6.263
> color sample #5.1.1 map #6 palette #0000ff:#00ffff:#00ff00:#ffff00:#ff0000
Map values for surface "cap near": minimum 3.125, mean 4.135, maximum 5.888
> hide #!5 models
> show #!5 models
> hide #!1 models
No surface chosen for coloring
> hide #!5 models
> show #!1 models
> color sample #1.1.1 map #3 palette
> 2.9,#0000ff:3.2,#00ffff:3.5,#00ff00:4.5,#ffff00:6,#ff0000
Map values for surface "cap near": minimum 3.252, mean 4.71, maximum 6.033
> color sample #1.1.1 map #3 palette
> 2.9,#0000ff:3.2,#00ffff:3.5,#00ff00:4.5,#ffff00:6,#ff0000
Map values for surface "cap near": minimum 3.252, mean 4.71, maximum 6.033
> hide #!1 models
> show #!5 models
> open
> /Users/singerm/Desktop/RNA_structure/Phenix/RealSpaceRefine_49/one_side_map_real_space_refined_049.pdb
Chain information for one_side_map_real_space_refined_049.pdb #2
---
Chain | Description
A | No description available
B F | No description available
C G | No description available
D H | No description available
E | No description available
I J | No description available
> hide surfaces
> hide cartoons
> hide atoms
> show cartoons
> color bychain
> hide #4 models
> ui windowfill toggle
> hide #!5 models
> show #!5 models
> hide #!2 models
> show #!2 models
> ui windowfill toggle
> set bgColor white
> hide #!2 models
> hide #!5 models
> view #2 clip false
No displayed objects specified.
> show #!2 models
> view #2 clip false
> show #!1 models
> view #1 clip false
> show #!5 models
> hide #!1 models
> hide #!2 models
> show #!1 models
> view #1 clip false
> hide #!1 models
> save 1.png format png supersample 3
> turn x 90
> turn y 90
> turn x 90
> show #!1 models
> hide #!1 models
> show #!1 models
> hide #!5 models
> turn x 90
> hide #!1 models
> show #!1 models
> save 2.png format png supersample 3
> hide #!1 models
> show #!2 models
> turn x 90
> save 3.png format png supersample 3
> turn x 90
> save 6.png format png supersample 3
> hide #!2 models
> show #!1 models
> turn x 90
> save 5.png format png supersample 3
> hide #!1 models
> show #!5 models
> turn x 90
> save 4.png format png supersample 3
> turn x 90
> save 7.png format png supersample 3
> hide #!5 models
> show #!2 models
> turn x 90
> save 8.png format png supersample 3
> hide #!2 models
> show #!1 models
> turn x 90
> save 9.png format png supersample 3
===== Log before crash end =====
Log:
Startup Messages
---
note | available bundle cache has not been initialized yet
UCSF ChimeraX version: 1.7.1 (2024-01-23)
© 2016-2023 Regents of the University of California. All rights reserved.
How to cite UCSF ChimeraX
OpenGL version: 4.1 INTEL-22.5.11
OpenGL renderer: Intel(R) Iris(TM) Plus Graphics OpenGL Engine
OpenGL vendor: Intel Inc.
Python: 3.11.2
Locale: UTF-8
Qt version: PyQt6 6.3.1, Qt 6.3.1
Qt runtime version: 6.3.2
Qt platform: cocoa
Hardware:
Hardware Overview:
Model Name: MacBook Pro
Model Identifier: MacBookPro16,2
Processor Name: Quad-Core Intel Core i5
Processor Speed: 2 GHz
Number of Processors: 1
Total Number of Cores: 4
L2 Cache (per Core): 512 KB
L3 Cache: 6 MB
Hyper-Threading Technology: Enabled
Memory: 16 GB
System Firmware Version: 2022.140.5.0.0 (iBridge: 21.16.6074.0.0,0)
OS Loader Version: 580.140.1~8
Software:
System Software Overview:
System Version: macOS 14.6.1 (23G93)
Kernel Version: Darwin 23.6.0
Time since boot: 10 days, 8 hours, 17 minutes
Graphics/Displays:
Intel Iris Plus Graphics:
Chipset Model: Intel Iris Plus Graphics
Type: GPU
Bus: Built-In
VRAM (Dynamic, Max): 1536 MB
Vendor: Intel
Device ID: 0x8a53
Revision ID: 0x0007
Metal Support: Metal 3
Displays:
Color LCD:
Display Type: Built-In Retina LCD
Resolution: 2560 x 1600 Retina
Framebuffer Depth: 30-Bit Color (ARGB2101010)
Mirror: Off
Online: Yes
Automatically Adjust Brightness: Yes
Connection Type: Internal
Q2577W:
Resolution: 2560 x 1440 (QHD/WQHD - Wide Quad High Definition)
UI Looks like: 2560 x 1440 @ 60.00Hz
Framebuffer Depth: 30-Bit Color (ARGB2101010)
Display Serial Number: ADQG29A000618
Main Display: Yes
Mirror: Off
Online: Yes
Rotation: Supported
Adapter Type: DVI or HDMI
Installed Packages:
alabaster: 0.7.16
appdirs: 1.4.4
appnope: 0.1.3
asttokens: 2.4.1
Babel: 2.14.0
backcall: 0.2.0
beautifulsoup4: 4.11.2
blockdiag: 3.0.0
blosc2: 2.0.0
build: 0.10.0
certifi: 2022.12.7
cftime: 1.6.3
charset-normalizer: 3.3.2
ChimeraX-AddCharge: 1.5.13
ChimeraX-AddH: 2.2.5
ChimeraX-AlignmentAlgorithms: 2.0.1
ChimeraX-AlignmentHdrs: 3.4.1
ChimeraX-AlignmentMatrices: 2.1
ChimeraX-Alignments: 2.12.2
ChimeraX-AlphaFold: 1.0
ChimeraX-AltlocExplorer: 1.1.1
ChimeraX-AmberInfo: 1.0
ChimeraX-Arrays: 1.1
ChimeraX-Atomic: 1.49.1
ChimeraX-AtomicLibrary: 12.1.5
ChimeraX-AtomSearch: 2.0.1
ChimeraX-AxesPlanes: 2.3.2
ChimeraX-BasicActions: 1.1.2
ChimeraX-BILD: 1.0
ChimeraX-BlastProtein: 2.1.2
ChimeraX-BondRot: 2.0.4
ChimeraX-BugReporter: 1.0.1
ChimeraX-BuildStructure: 2.10.5
ChimeraX-Bumps: 1.0
ChimeraX-BundleBuilder: 1.2.2
ChimeraX-ButtonPanel: 1.0.1
ChimeraX-CageBuilder: 1.0.1
ChimeraX-CellPack: 1.0
ChimeraX-Centroids: 1.3.2
ChimeraX-ChangeChains: 1.1
ChimeraX-CheckWaters: 1.3.2
ChimeraX-ChemGroup: 2.0.1
ChimeraX-Clashes: 2.2.4
ChimeraX-ColorActions: 1.0.3
ChimeraX-ColorGlobe: 1.0
ChimeraX-ColorKey: 1.5.5
ChimeraX-CommandLine: 1.2.5
ChimeraX-ConnectStructure: 2.0.1
ChimeraX-Contacts: 1.0.1
ChimeraX-Core: 1.7.1
ChimeraX-CoreFormats: 1.2
ChimeraX-coulombic: 1.4.2
ChimeraX-Crosslinks: 1.0
ChimeraX-Crystal: 1.0
ChimeraX-CrystalContacts: 1.0.1
ChimeraX-DataFormats: 1.2.3
ChimeraX-Dicom: 1.2
ChimeraX-DistMonitor: 1.4
ChimeraX-DockPrep: 1.1.3
ChimeraX-Dssp: 2.0
ChimeraX-EMDB-SFF: 1.0
ChimeraX-ESMFold: 1.0
ChimeraX-FileHistory: 1.0.1
ChimeraX-FunctionKey: 1.0.1
ChimeraX-Geometry: 1.3
ChimeraX-gltf: 1.0
ChimeraX-Graphics: 1.1.1
ChimeraX-Hbonds: 2.4
ChimeraX-Help: 1.2.2
ChimeraX-HKCage: 1.3
ChimeraX-IHM: 1.1
ChimeraX-ImageFormats: 1.2
ChimeraX-IMOD: 1.0
ChimeraX-IO: 1.0.1
ChimeraX-ItemsInspection: 1.0.1
ChimeraX-IUPAC: 1.0
ChimeraX-Label: 1.1.8
ChimeraX-ListInfo: 1.2.2
ChimeraX-Log: 1.1.6
ChimeraX-LookingGlass: 1.1
ChimeraX-Maestro: 1.9.1
ChimeraX-Map: 1.1.4
ChimeraX-MapData: 2.0
ChimeraX-MapEraser: 1.0.1
ChimeraX-MapFilter: 2.0.1
ChimeraX-MapFit: 2.0
ChimeraX-MapSeries: 2.1.1
ChimeraX-Markers: 1.0.1
ChimeraX-Mask: 1.0.2
ChimeraX-MatchMaker: 2.1.2
ChimeraX-MCopy: 1.0
ChimeraX-MDcrds: 2.6.1
ChimeraX-MedicalToolbar: 1.0.2
ChimeraX-Meeting: 1.0.1
ChimeraX-MLP: 1.1.1
ChimeraX-mmCIF: 2.12.1
ChimeraX-MMTF: 2.2
ChimeraX-Modeller: 1.5.14
ChimeraX-ModelPanel: 1.4
ChimeraX-ModelSeries: 1.0.1
ChimeraX-Mol2: 2.0.3
ChimeraX-Mole: 1.0
ChimeraX-Morph: 1.0.2
ChimeraX-MouseModes: 1.2
ChimeraX-Movie: 1.0
ChimeraX-Neuron: 1.0
ChimeraX-Nifti: 1.1
ChimeraX-NRRD: 1.1
ChimeraX-Nucleotides: 2.0.3
ChimeraX-OpenCommand: 1.13.1
ChimeraX-PDB: 2.7.3
ChimeraX-PDBBio: 1.0.1
ChimeraX-PDBLibrary: 1.0.4
ChimeraX-PDBMatrices: 1.0
ChimeraX-PickBlobs: 1.0.1
ChimeraX-Positions: 1.0
ChimeraX-PresetMgr: 1.1
ChimeraX-PubChem: 2.1
ChimeraX-ReadPbonds: 1.0.1
ChimeraX-Registration: 1.1.2
ChimeraX-RemoteControl: 1.0
ChimeraX-RenderByAttr: 1.1
ChimeraX-RenumberResidues: 1.1
ChimeraX-ResidueFit: 1.0.1
ChimeraX-RestServer: 1.2
ChimeraX-RNALayout: 1.0
ChimeraX-RotamerLibMgr: 4.0
ChimeraX-RotamerLibsDunbrack: 2.0
ChimeraX-RotamerLibsDynameomics: 2.0
ChimeraX-RotamerLibsRichardson: 2.0
ChimeraX-SaveCommand: 1.5.1
ChimeraX-SchemeMgr: 1.0
ChimeraX-SDF: 2.0.2
ChimeraX-Segger: 1.0
ChimeraX-Segment: 1.0.1
ChimeraX-SelInspector: 1.0
ChimeraX-SeqView: 2.11
ChimeraX-Shape: 1.0.1
ChimeraX-Shell: 1.0.1
ChimeraX-Shortcuts: 1.1.1
ChimeraX-ShowSequences: 1.0.2
ChimeraX-SideView: 1.0.1
ChimeraX-Smiles: 2.1.2
ChimeraX-SmoothLines: 1.0
ChimeraX-SpaceNavigator: 1.0
ChimeraX-StdCommands: 1.12.4
ChimeraX-STL: 1.0.1
ChimeraX-Storm: 1.0
ChimeraX-StructMeasure: 1.1.2
ChimeraX-Struts: 1.0.1
ChimeraX-Surface: 1.0.1
ChimeraX-SwapAA: 2.0.1
ChimeraX-SwapRes: 2.2.2
ChimeraX-TapeMeasure: 1.0
ChimeraX-TaskManager: 1.0
ChimeraX-Test: 1.0
ChimeraX-Toolbar: 1.1.2
ChimeraX-ToolshedUtils: 1.2.4
ChimeraX-Topography: 1.0
ChimeraX-ToQuest: 1.0
ChimeraX-Tug: 1.0.1
ChimeraX-UI: 1.33.3
ChimeraX-uniprot: 2.3
ChimeraX-UnitCell: 1.0.1
ChimeraX-ViewDockX: 1.3.2
ChimeraX-VIPERdb: 1.0
ChimeraX-Vive: 1.1
ChimeraX-VolumeMenu: 1.0.1
ChimeraX-vrml: 1.0
ChimeraX-VTK: 1.0
ChimeraX-WavefrontOBJ: 1.0
ChimeraX-WebCam: 1.0.2
ChimeraX-WebServices: 1.1.3
ChimeraX-Zone: 1.0.1
colorama: 0.4.6
comm: 0.2.1
contourpy: 1.2.0
cxservices: 1.2.2
cycler: 0.12.1
Cython: 0.29.33
debugpy: 1.8.0
decorator: 5.1.1
docutils: 0.19
executing: 2.0.1
filelock: 3.9.0
fonttools: 4.47.2
funcparserlib: 2.0.0a0
glfw: 2.6.4
grako: 3.16.5
h5py: 3.10.0
html2text: 2020.1.16
idna: 3.6
ihm: 0.38
imagecodecs: 2023.9.18
imagesize: 1.4.1
ipykernel: 6.23.2
ipython: 8.14.0
ipython-genutils: 0.2.0
ipywidgets: 8.1.1
jedi: 0.18.2
Jinja2: 3.1.2
jupyter-client: 8.2.0
jupyter-core: 5.7.1
jupyterlab-widgets: 3.0.9
kiwisolver: 1.4.5
line-profiler: 4.0.2
lxml: 4.9.2
lz4: 4.3.2
MarkupSafe: 2.1.4
matplotlib: 3.7.2
matplotlib-inline: 0.1.6
msgpack: 1.0.4
nest-asyncio: 1.6.0
netCDF4: 1.6.2
networkx: 3.1
nibabel: 5.0.1
nptyping: 2.5.0
numexpr: 2.8.8
numpy: 1.25.1
openvr: 1.23.701
packaging: 21.3
ParmEd: 3.4.3
parso: 0.8.3
pep517: 0.13.0
pexpect: 4.9.0
pickleshare: 0.7.5
pillow: 10.2.0
pip: 23.0
pkginfo: 1.9.6
platformdirs: 4.1.0
prompt-toolkit: 3.0.43
psutil: 5.9.5
ptyprocess: 0.7.0
pure-eval: 0.2.2
py-cpuinfo: 9.0.0
pycollada: 0.7.2
pydicom: 2.3.0
Pygments: 2.16.1
pynrrd: 1.0.0
PyOpenGL: 3.1.7
PyOpenGL-accelerate: 3.1.7
pyopenxr: 1.0.2801
pyparsing: 3.0.9
pyproject-hooks: 1.0.0
PyQt6-commercial: 6.3.1
PyQt6-Qt6: 6.3.2
PyQt6-sip: 13.4.0
PyQt6-WebEngine-commercial: 6.3.1
PyQt6-WebEngine-Qt6: 6.3.2
python-dateutil: 2.8.2
pytz: 2023.3.post1
pyzmq: 25.1.2
qtconsole: 5.4.3
QtPy: 2.4.1
RandomWords: 0.4.0
requests: 2.31.0
scipy: 1.11.1
setuptools: 67.4.0
setuptools-scm: 7.0.5
sfftk-rw: 0.7.3
six: 1.16.0
snowballstemmer: 2.2.0
sortedcontainers: 2.4.0
soupsieve: 2.5
sphinx: 6.1.3
sphinx-autodoc-typehints: 1.22
sphinxcontrib-applehelp: 1.0.8
sphinxcontrib-blockdiag: 3.0.0
sphinxcontrib-devhelp: 1.0.6
sphinxcontrib-htmlhelp: 2.0.5
sphinxcontrib-jsmath: 1.0.1
sphinxcontrib-qthelp: 1.0.7
sphinxcontrib-serializinghtml: 1.1.10
stack-data: 0.6.3
superqt: 0.5.0
tables: 3.8.0
tcia-utils: 1.5.1
tifffile: 2023.7.18
tinyarray: 1.2.4
tomli: 2.0.1
tornado: 6.4
traitlets: 5.9.0
typing-extensions: 4.9.0
tzdata: 2023.4
urllib3: 2.1.0
wcwidth: 0.2.13
webcolors: 1.12
wheel: 0.38.4
wheel-filename: 1.4.1
widgetsnbextension: 4.0.9
![[ChimeraX Issue Tracking System]](/trac/ChimeraX/chrome/site/ChimeraX-icon.svg){kind=icon}
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