![[ChimeraX Issue Tracking System]](/trac/ChimeraX/chrome/site/ChimeraX-icon.svg){kind=icon}
Opened 7 months ago
Closed 7 months ago
#17260 closed defect (duplicate)
Crash moving window between screens
| Reported by: | Owned by: | Tom Goddard | |
|---|---|---|---|
| Priority: | normal | Milestone: | |
| Component: | Window Toolkit | Version: | |
| Keywords: | Cc: | ||
| Blocked By: | Blocking: | ||
| Notify when closed: | Platform: | all | |
| Project: | ChimeraX |
Description
The following bug report has been submitted:
Platform: macOS-15.3.1-arm64-arm-64bit
ChimeraX Version: 1.9rc202411190203 (2024-11-19 02:03:03 UTC)
Description
Last time you used ChimeraX it crashed.
Please describe steps that led to the crash here.
Fatal Python error: Segmentation fault
Current thread 0x00000001f5620840 (most recent call first):
File "/Applications/ChimeraX-1.9-rc2024.11.19.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/ui/gui.py", line 330 in event_loop
File "/Applications/ChimeraX-1.9-rc2024.11.19.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/core/__main__.py", line 1054 in init
File "/Applications/ChimeraX-1.9-rc2024.11.19.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/core/__main__.py", line 1217 in
File "", line 88 in _run_code
File "", line 198 in _run_module_as_main
Extension modules: chimerax.arrays._arrays, numpy.core._multiarray_umath, numpy.core._multiarray_tests, numpy.linalg._umath_linalg, numpy.fft._pocketfft_internal, numpy.random._common, numpy.random.bit_generator, numpy.random._bounded_integers, numpy.random._mt19937, numpy.random.mtrand, numpy.random._philox, numpy.random._pcg64, numpy.random._sfc64, numpy.random._generator, chimerax.geometry._geometry, PyQt6.QtCore, PyQt6.QtGui, PyQt6.QtWidgets, PyQt6.QtNetwork, PyQt6.QtPrintSupport, PyQt6.QtWebChannel, PyQt6.QtWebEngineCore, PyQt6.QtWebEngineWidgets, chimerax.atomic_lib._load_libs, tinyarray, chimerax.atomic.cymol, chimerax.atomic.cytmpl, chimerax.pdb_lib._load_libs, chimerax.map._map, charset_normalizer.md, requests.packages.charset_normalizer.md, requests.packages.chardet.md, PIL._imaging, kiwisolver._cext, OpenGL_accelerate.errorchecker, OpenGL_accelerate.wrapper, OpenGL_accelerate.formathandler, OpenGL_accelerate.arraydatatype, OpenGL_accelerate.latebind, OpenGL_accelerate.vbo, chimerax.surface._surface, chimerax.core._mac_util, OpenGL_accelerate.numpy_formathandler, OpenGL_accelerate.nones_formathandler, chimerax.mmcif._mmcif, chimerax.mmcif.mmcif, chimerax.atomic._ribbons, chimerax.graphics._graphics, chimerax.pdb._pdbio, PIL._imagingmath, chimerax.alignment_algs._sw, chimerax.dssp._dssp, chimerax.alignment_algs._nw, PyQt6.QtOpenGL, PyQt6.QtOpenGLWidgets (total: 55)
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{
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"procRole" : "Foreground",
"version" : 2,
"userID" : 503,
"deployVersion" : 210,
"modelCode" : "Mac15,6",
"coalitionID" : 84964,
"osVersion" : {
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"build" : "24D70",
"releaseType" : "User"
},
"captureTime" : "2025-04-01 14:41:56.2144 +0200",
"codeSigningMonitor" : 1,
"incident" : "1B99DC10-A413-4222-92F6-51C48EE4DF71",
"pid" : 68775,
"translated" : false,
"cpuType" : "ARM-64",
"roots_installed" : 0,
"bug_type" : "309",
"procLaunch" : "2025-04-01 11:00:32.1847 +0200",
"procStartAbsTime" : 19209920680905,
"procExitAbsTime" : 19526217840521,
"procName" : "ChimeraX",
"procPath" : "\/Applications\/ChimeraX-1.9-rc2024.11.19.app\/Contents\/MacOS\/ChimeraX",
"bundleInfo" : {"CFBundleShortVersionString":"1.9.0","CFBundleVersion":"1.9.0.0","CFBundleIdentifier":"edu.ucsf.cgl.ChimeraX"},
"storeInfo" : {"deviceIdentifierForVendor":"0DBDE2AA-BCAF-5D82-942D-DCC62EFF094B","thirdParty":true},
"parentProc" : "launchd",
"parentPid" : 1,
"coalitionName" : "edu.ucsf.cgl.ChimeraX",
"crashReporterKey" : "DB04994C-BA0C-58E7-5999-235D9D817611",
"codeSigningID" : "edu.ucsf.cgl.ChimeraX",
"codeSigningTeamID" : "LWV8X224YF",
"codeSigningFlags" : 570491649,
"codeSigningValidationCategory" : 6,
"codeSigningTrustLevel" : 4294967295,
"instructionByteStream" : {"beforePC":"fyMD1f17v6n9AwCRcuD\/l78DAJH9e8Go\/w9f1sADX9YQKYDSARAA1A==","atPC":"AwEAVH8jA9X9e7+p\/QMAkWfg\/5e\/AwCR\/XvBqP8PX9bAA1\/WcAqA0g=="},
"bootSessionUUID" : "099242C0-8646-4B6E-89EF-B9C735B674DA",
"wakeTime" : 9463,
"sleepWakeUUID" : "06BDC9D9-386C-4E9D-82C5-1E277B5614A5",
"sip" : "enabled",
"vmRegionInfo" : "0x737a7982898 is not in any region. Bytes after previous region: 7454580025497 Bytes before following region: 97617499903848\n REGION TYPE START - END [ VSIZE] PRT\/MAX SHRMOD REGION DETAIL\n commpage (reserved) 1000000000-7000000000 [384.0G] ---\/--- SM=NUL reserved VM address space (unallocated)\n---> GAP OF 0x5f9000000000 BYTES\n MALLOC_NANO 600000000000-600020000000 [512.0M] rw-\/rwx SM=PRV ",
"exception" : {"codes":"0x0000000000000001, 0x00008737a7982898","rawCodes":[1,148673104717976],"type":"EXC_BAD_ACCESS","signal":"SIGSEGV","subtype":"KERN_INVALID_ADDRESS at 0x00008737a7982898 -> 0x00000737a7982898 (possible pointer authentication failure)"},
"termination" : {"flags":0,"code":11,"namespace":"SIGNAL","indicator":"Segmentation fault: 11","byProc":"ChimeraX","byPid":68775},
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===== Log before crash start =====
Startup Messages
---
note | available bundle cache has not been initialized yet
UCSF ChimeraX version: 1.9rc202411190203 (2024-11-19)
© 2016-2024 Regents of the University of California. All rights reserved.
How to cite UCSF ChimeraX
> open
> /Users/maellepaillat/Desktop/Papier/Reviewing/Predictions/CTDs/ctd1645/fold_ctd1645_model_0.cif
Chain information for fold_ctd1645_model_0.cif #1
---
Chain | Description
A | .
Computing secondary structure
> open
> /Users/maellepaillat/Desktop/Papier/Reviewing/Predictions/CTDs/ctd1720/fold_ctd1720_model_0.cif
Chain information for fold_ctd1720_model_0.cif #2
---
Chain | Description
A | .
Computing secondary structure
> open
> /Users/maellepaillat/Desktop/Papier/Reviewing/Predictions/CTDs/ctd1985/fold_ctd1985_model_0.cif
Chain information for fold_ctd1985_model_0.cif #3
---
Chain | Description
A | .
Computing secondary structure
> open
> /Users/maellepaillat/Desktop/Papier/Reviewing/Predictions/CTDs/ctd2273/fold_ctd2273_model_0.cif
Chain information for fold_ctd2273_model_0.cif #4
---
Chain | Description
A | .
Computing secondary structure
> open
> /Users/maellepaillat/Desktop/Papier/Reviewing/Predictions/CTDs/ctd3478/fold_ctd3478_model_0.cif
Chain information for fold_ctd3478_model_0.cif #5
---
Chain | Description
A | .
Computing secondary structure
> open
> /Users/maellepaillat/Desktop/Papier/Reviewing/Predictions/CTDs/ctd3952/fold_ctd3952_model_0.cif
Chain information for fold_ctd3952_model_0.cif #6
---
Chain | Description
A | .
Computing secondary structure
> open
> /Users/maellepaillat/Desktop/Papier/Reviewing/Predictions/CTDs/ctd3971/fold_ctd3971_model_0.cif
Chain information for fold_ctd3971_model_0.cif #7
---
Chain | Description
A | .
Computing secondary structure
> open
> /Users/maellepaillat/Desktop/Papier/Reviewing/Predictions/CTDs/ctd4538/fold_ctd4538_model_0.cif
Chain information for fold_ctd4538_model_0.cif #8
---
Chain | Description
A | .
Computing secondary structure
> open
> /Users/maellepaillat/Desktop/Papier/Reviewing/Predictions/CTDs/ctd4750/fold_ctd4750_model_0.cif
Chain information for fold_ctd4750_model_0.cif #9
---
Chain | Description
A | .
Computing secondary structure
> open
> /Users/maellepaillat/Desktop/Papier/Reviewing/Predictions/CTDs/ctd4934/fold_ctd4934_model_0.cif
Chain information for fold_ctd4934_model_0.cif #10
---
Chain | Description
A | .
Computing secondary structure
> open
> /Users/maellepaillat/Desktop/Papier/Reviewing/Predictions/CTDs/ctdsprb/fold_ctdsprb_model_0.cif
Chain information for fold_ctdsprb_model_0.cif #11
---
Chain | Description
A | .
Computing secondary structure
> ui tool show Matchmaker
> matchmaker #2-11 to #1
Computing secondary structure
Parameters
---
Chain pairing | bb
Alignment algorithm | Needleman-Wunsch
Similarity matrix | BLOSUM-62
SS fraction | 0.3
Gap open (HH/SS/other) | 18/18/6
Gap extend | 1
SS matrix | | | H | S | O
---|---|---|---
H | 6 | -9 | -6
S | | 6 | -6
O | | | 4
Iteration cutoff | 2
Matchmaker fold_ctd1645_model_0.cif, chain A (#1) with
fold_ctd1720_model_0.cif, chain A (#2), sequence alignment score = 174.3
RMSD between 57 pruned atom pairs is 0.854 angstroms; (across all 87 pairs:
4.096)
Matchmaker fold_ctd1645_model_0.cif, chain A (#1) with
fold_ctd1985_model_0.cif, chain A (#3), sequence alignment score = 214.7
RMSD between 78 pruned atom pairs is 0.564 angstroms; (across all 98 pairs:
3.070)
Matchmaker fold_ctd1645_model_0.cif, chain A (#1) with
fold_ctd2273_model_0.cif, chain A (#4), sequence alignment score = 191.6
RMSD between 71 pruned atom pairs is 0.708 angstroms; (across all 92 pairs:
2.801)
Matchmaker fold_ctd1645_model_0.cif, chain A (#1) with
fold_ctd3478_model_0.cif, chain A (#5), sequence alignment score = 216.1
RMSD between 80 pruned atom pairs is 0.738 angstroms; (across all 93 pairs:
2.232)
Matchmaker fold_ctd1645_model_0.cif, chain A (#1) with
fold_ctd3952_model_0.cif, chain A (#6), sequence alignment score = 405.9
RMSD between 99 pruned atom pairs is 0.608 angstroms; (across all 100 pairs:
0.669)
Matchmaker fold_ctd1645_model_0.cif, chain A (#1) with
fold_ctd3971_model_0.cif, chain A (#7), sequence alignment score = 229.9
RMSD between 75 pruned atom pairs is 0.561 angstroms; (across all 88 pairs:
3.272)
Matchmaker fold_ctd1645_model_0.cif, chain A (#1) with
fold_ctd4538_model_0.cif, chain A (#8), sequence alignment score = 324.4
RMSD between 83 pruned atom pairs is 0.637 angstroms; (across all 93 pairs:
2.212)
Matchmaker fold_ctd1645_model_0.cif, chain A (#1) with
fold_ctd4750_model_0.cif, chain A (#9), sequence alignment score = 136.8
RMSD between 64 pruned atom pairs is 0.687 angstroms; (across all 88 pairs:
4.548)
Matchmaker fold_ctd1645_model_0.cif, chain A (#1) with
fold_ctd4934_model_0.cif, chain A (#10), sequence alignment score = 157.7
RMSD between 61 pruned atom pairs is 0.905 angstroms; (across all 85 pairs:
4.265)
Matchmaker fold_ctd1645_model_0.cif, chain A (#1) with
fold_ctdsprb_model_0.cif, chain A (#11), sequence alignment score = 147.3
RMSD between 66 pruned atom pairs is 0.830 angstroms; (across all 88 pairs:
3.551)
> ui tool show Matchmaker
> matchmaker #1-10 to #11
Computing secondary structure
Parameters
---
Chain pairing | bb
Alignment algorithm | Needleman-Wunsch
Similarity matrix | BLOSUM-62
SS fraction | 0.3
Gap open (HH/SS/other) | 18/18/6
Gap extend | 1
SS matrix | | | H | S | O
---|---|---|---
H | 6 | -9 | -6
S | | 6 | -6
O | | | 4
Iteration cutoff | 2
Matchmaker fold_ctdsprb_model_0.cif, chain A (#11) with
fold_ctd1645_model_0.cif, chain A (#1), sequence alignment score = 147.3
RMSD between 66 pruned atom pairs is 0.830 angstroms; (across all 88 pairs:
3.551)
Matchmaker fold_ctdsprb_model_0.cif, chain A (#11) with
fold_ctd1720_model_0.cif, chain A (#2), sequence alignment score = 233.7
RMSD between 79 pruned atom pairs is 0.712 angstroms; (across all 98 pairs:
3.511)
Matchmaker fold_ctdsprb_model_0.cif, chain A (#11) with
fold_ctd1985_model_0.cif, chain A (#3), sequence alignment score = 164.3
RMSD between 56 pruned atom pairs is 0.736 angstroms; (across all 89 pairs:
4.404)
Matchmaker fold_ctdsprb_model_0.cif, chain A (#11) with
fold_ctd2273_model_0.cif, chain A (#4), sequence alignment score = 174.5
RMSD between 66 pruned atom pairs is 0.621 angstroms; (across all 88 pairs:
2.636)
Matchmaker fold_ctdsprb_model_0.cif, chain A (#11) with
fold_ctd3478_model_0.cif, chain A (#5), sequence alignment score = 209.6
RMSD between 67 pruned atom pairs is 0.982 angstroms; (across all 92 pairs:
4.823)
Matchmaker fold_ctdsprb_model_0.cif, chain A (#11) with
fold_ctd3952_model_0.cif, chain A (#6), sequence alignment score = 131.4
RMSD between 67 pruned atom pairs is 0.976 angstroms; (across all 88 pairs:
3.386)
Matchmaker fold_ctdsprb_model_0.cif, chain A (#11) with
fold_ctd3971_model_0.cif, chain A (#7), sequence alignment score = 194.4
RMSD between 64 pruned atom pairs is 0.846 angstroms; (across all 95 pairs:
4.505)
Matchmaker fold_ctdsprb_model_0.cif, chain A (#11) with
fold_ctd4538_model_0.cif, chain A (#8), sequence alignment score = 146.5
RMSD between 61 pruned atom pairs is 0.735 angstroms; (across all 81 pairs:
3.501)
Matchmaker fold_ctdsprb_model_0.cif, chain A (#11) with
fold_ctd4750_model_0.cif, chain A (#9), sequence alignment score = 161.7
RMSD between 72 pruned atom pairs is 0.665 angstroms; (across all 93 pairs:
4.202)
Matchmaker fold_ctdsprb_model_0.cif, chain A (#11) with
fold_ctd4934_model_0.cif, chain A (#10), sequence alignment score = 247.3
RMSD between 71 pruned atom pairs is 0.713 angstroms; (across all 95 pairs:
2.960)
> open /Users/maellepaillat/Downloads/folds_2025_04_01_09_05(1).zip
Unrecognized file suffix '.zip'
> open
> /Users/maellepaillat/Downloads/folds_2025_04_01_09_05/ctd1123/fold_ctd1123_model_0.cif
Chain information for fold_ctd1123_model_0.cif #12
---
Chain | Description
A | .
Computing secondary structure
> ui tool show Matchmaker
> matchmaker #1-10,12 to #11
Computing secondary structure
Parameters
---
Chain pairing | bb
Alignment algorithm | Needleman-Wunsch
Similarity matrix | BLOSUM-62
SS fraction | 0.3
Gap open (HH/SS/other) | 18/18/6
Gap extend | 1
SS matrix | | | H | S | O
---|---|---|---
H | 6 | -9 | -6
S | | 6 | -6
O | | | 4
Iteration cutoff | 2
Matchmaker fold_ctdsprb_model_0.cif, chain A (#11) with
fold_ctd1645_model_0.cif, chain A (#1), sequence alignment score = 147.3
RMSD between 66 pruned atom pairs is 0.830 angstroms; (across all 88 pairs:
3.551)
Matchmaker fold_ctdsprb_model_0.cif, chain A (#11) with
fold_ctd1720_model_0.cif, chain A (#2), sequence alignment score = 233.7
RMSD between 79 pruned atom pairs is 0.712 angstroms; (across all 98 pairs:
3.511)
Matchmaker fold_ctdsprb_model_0.cif, chain A (#11) with
fold_ctd1985_model_0.cif, chain A (#3), sequence alignment score = 164.3
RMSD between 56 pruned atom pairs is 0.736 angstroms; (across all 89 pairs:
4.404)
Matchmaker fold_ctdsprb_model_0.cif, chain A (#11) with
fold_ctd2273_model_0.cif, chain A (#4), sequence alignment score = 174.5
RMSD between 66 pruned atom pairs is 0.621 angstroms; (across all 88 pairs:
2.636)
Matchmaker fold_ctdsprb_model_0.cif, chain A (#11) with
fold_ctd3478_model_0.cif, chain A (#5), sequence alignment score = 209.6
RMSD between 67 pruned atom pairs is 0.982 angstroms; (across all 92 pairs:
4.823)
Matchmaker fold_ctdsprb_model_0.cif, chain A (#11) with
fold_ctd3952_model_0.cif, chain A (#6), sequence alignment score = 131.4
RMSD between 67 pruned atom pairs is 0.976 angstroms; (across all 88 pairs:
3.386)
Matchmaker fold_ctdsprb_model_0.cif, chain A (#11) with
fold_ctd3971_model_0.cif, chain A (#7), sequence alignment score = 194.4
RMSD between 64 pruned atom pairs is 0.846 angstroms; (across all 95 pairs:
4.505)
Matchmaker fold_ctdsprb_model_0.cif, chain A (#11) with
fold_ctd4538_model_0.cif, chain A (#8), sequence alignment score = 146.5
RMSD between 61 pruned atom pairs is 0.735 angstroms; (across all 81 pairs:
3.501)
Matchmaker fold_ctdsprb_model_0.cif, chain A (#11) with
fold_ctd4750_model_0.cif, chain A (#9), sequence alignment score = 161.7
RMSD between 72 pruned atom pairs is 0.665 angstroms; (across all 93 pairs:
4.202)
Matchmaker fold_ctdsprb_model_0.cif, chain A (#11) with
fold_ctd4934_model_0.cif, chain A (#10), sequence alignment score = 247.3
RMSD between 71 pruned atom pairs is 0.713 angstroms; (across all 95 pairs:
2.960)
Matchmaker fold_ctdsprb_model_0.cif, chain A (#11) with
fold_ctd1123_model_0.cif, chain A (#12), sequence alignment score = 238.8
RMSD between 77 pruned atom pairs is 0.624 angstroms; (across all 93 pairs:
4.356)
> ui tool show Matchmaker
> matchmaker #2-3,9-10,12 to #11
Computing secondary structure
Parameters
---
Chain pairing | bb
Alignment algorithm | Needleman-Wunsch
Similarity matrix | BLOSUM-62
SS fraction | 0.3
Gap open (HH/SS/other) | 18/18/6
Gap extend | 1
SS matrix | | | H | S | O
---|---|---|---
H | 6 | -9 | -6
S | | 6 | -6
O | | | 4
Iteration cutoff | 2
Matchmaker fold_ctdsprb_model_0.cif, chain A (#11) with
fold_ctd1720_model_0.cif, chain A (#2), sequence alignment score = 233.7
RMSD between 79 pruned atom pairs is 0.712 angstroms; (across all 98 pairs:
3.511)
Matchmaker fold_ctdsprb_model_0.cif, chain A (#11) with
fold_ctd1985_model_0.cif, chain A (#3), sequence alignment score = 164.3
RMSD between 56 pruned atom pairs is 0.736 angstroms; (across all 89 pairs:
4.404)
Matchmaker fold_ctdsprb_model_0.cif, chain A (#11) with
fold_ctd4750_model_0.cif, chain A (#9), sequence alignment score = 161.7
RMSD between 72 pruned atom pairs is 0.665 angstroms; (across all 93 pairs:
4.202)
Matchmaker fold_ctdsprb_model_0.cif, chain A (#11) with
fold_ctd4934_model_0.cif, chain A (#10), sequence alignment score = 247.3
RMSD between 71 pruned atom pairs is 0.713 angstroms; (across all 95 pairs:
2.960)
Matchmaker fold_ctdsprb_model_0.cif, chain A (#11) with
fold_ctd1123_model_0.cif, chain A (#12), sequence alignment score = 238.8
RMSD between 77 pruned atom pairs is 0.624 angstroms; (across all 93 pairs:
4.356)
> hide #1 models
> hide #4 models
> hide #5 models
> hide #6 models
> hide #7 models
> hide #8 models
> hide #2 models
> hide #3 models
> hide #9 models
> hide #10 models
> hide #11 models
> hide #12 models
> show #1 models
> show #4 models
> show #5 models
> show #6 models
> show #7 models
> show #8 models
> ui tool show Matchmaker
> matchmaker #1-5,7-12 to #6
Computing secondary structure
Parameters
---
Chain pairing | bb
Alignment algorithm | Needleman-Wunsch
Similarity matrix | BLOSUM-62
SS fraction | 0.3
Gap open (HH/SS/other) | 18/18/6
Gap extend | 1
SS matrix | | | H | S | O
---|---|---|---
H | 6 | -9 | -6
S | | 6 | -6
O | | | 4
Iteration cutoff | 2
Matchmaker fold_ctd3952_model_0.cif, chain A (#6) with
fold_ctd1645_model_0.cif, chain A (#1), sequence alignment score = 405.9
RMSD between 99 pruned atom pairs is 0.608 angstroms; (across all 100 pairs:
0.669)
Matchmaker fold_ctd3952_model_0.cif, chain A (#6) with
fold_ctd1720_model_0.cif, chain A (#2), sequence alignment score = 142.3
RMSD between 61 pruned atom pairs is 0.932 angstroms; (across all 87 pairs:
3.832)
Matchmaker fold_ctd3952_model_0.cif, chain A (#6) with
fold_ctd1985_model_0.cif, chain A (#3), sequence alignment score = 199.2
RMSD between 77 pruned atom pairs is 0.606 angstroms; (across all 98 pairs:
3.001)
Matchmaker fold_ctd3952_model_0.cif, chain A (#6) with
fold_ctd2273_model_0.cif, chain A (#4), sequence alignment score = 177.2
RMSD between 72 pruned atom pairs is 0.858 angstroms; (across all 92 pairs:
3.123)
Matchmaker fold_ctd3952_model_0.cif, chain A (#6) with
fold_ctd3478_model_0.cif, chain A (#5), sequence alignment score = 206.6
RMSD between 79 pruned atom pairs is 0.684 angstroms; (across all 93 pairs:
2.198)
Matchmaker fold_ctd3952_model_0.cif, chain A (#6) with
fold_ctd3971_model_0.cif, chain A (#7), sequence alignment score = 221.6
RMSD between 72 pruned atom pairs is 0.621 angstroms; (across all 88 pairs:
3.290)
Matchmaker fold_ctd3952_model_0.cif, chain A (#6) with
fold_ctd4538_model_0.cif, chain A (#8), sequence alignment score = 287.4
RMSD between 80 pruned atom pairs is 0.676 angstroms; (across all 93 pairs:
2.147)
Matchmaker fold_ctd3952_model_0.cif, chain A (#6) with
fold_ctd4750_model_0.cif, chain A (#9), sequence alignment score = 139
RMSD between 56 pruned atom pairs is 0.656 angstroms; (across all 88 pairs:
6.781)
Matchmaker fold_ctd3952_model_0.cif, chain A (#6) with
fold_ctd4934_model_0.cif, chain A (#10), sequence alignment score = 146
RMSD between 56 pruned atom pairs is 1.028 angstroms; (across all 83 pairs:
4.535)
Matchmaker fold_ctd3952_model_0.cif, chain A (#6) with
fold_ctdsprb_model_0.cif, chain A (#11), sequence alignment score = 131.4
RMSD between 67 pruned atom pairs is 0.976 angstroms; (across all 88 pairs:
3.386)
Matchmaker fold_ctd3952_model_0.cif, chain A (#6) with
fold_ctd1123_model_0.cif, chain A (#12), sequence alignment score = 135.8
RMSD between 61 pruned atom pairs is 0.887 angstroms; (across all 83 pairs:
4.306)
> hide #7 models
> hide #8 models
> hide #5 models
> hide #4 models
> color #1 #53878fff
> color #6 #ff9300ff
> color #6 #bd6e01ff
> color #6 #bd8236ff
> color #6 #bd7220ff
> color #6 #bd9041ff
> color #6 #bd851aff
> color #6 #bd7210ff
> color #6 #bd7819ff
> color #6 #bd731eff
> color #6 #c57820ff
> set bgColor white
> save /Users/maellepaillat/Desktop/image43.png supersample 3
> view orient
> undo
> set bgColor white
> ui tool show "Side View"
> save /Users/maellepaillat/Desktop/image44.png supersample 3
> save /Users/maellepaillat/Desktop/image45.png supersample 3
> hide #6 models
> show #11 models
> color #11 #af3224ff
> hide #1 models
> show #1 models
> save /Users/maellepaillat/Desktop/image46.png supersample 3
> show #6 models
> hide #11 models
> save /Users/maellepaillat/Desktop/image47.png supersample 3
> save /Users/maellepaillat/Desktop/image48.png supersample 3
> hide #6 models
> show #11 models
> save /Users/maellepaillat/Desktop/image49.png supersample 3
> save /Users/maellepaillat/Desktop/image50.png supersample 3
> show #6 models
> hide #11 models
> save /Users/maellepaillat/Desktop/image51.png supersample 3
> hide #6 models
> show #7 models
> color #7 #b12874ff
> color #7 #c12c7eff
> color #7 #b72a78ff
> save /Users/maellepaillat/Desktop/image52.png supersample 3
> hide #7 models
> show #11 models
> save /Users/maellepaillat/Desktop/image43.png supersample 3
> show #6 models
> hide #11 models
> save /Users/maellepaillat/Desktop/image44.png supersample 3
> hide #6 models
> show #7 models
> save /Users/maellepaillat/Desktop/image45.png supersample 3
> show #11 models
> hide #7 models
> save /Users/maellepaillat/Desktop/image46.png supersample 3
> show #6 models
> hide #11 models
> save /Users/maellepaillat/Desktop/image47.png supersample 3
> hide #6 models
> show #7 models
> save /Users/maellepaillat/Desktop/image48.png supersample 3
> show #11 models
> hide #7 models
> save /Users/maellepaillat/Desktop/image49.png supersample 3
> show #6 models
> hide #11 models
> save /Users/maellepaillat/Desktop/image50.png supersample 3
> hide #6 models
> show #7 models
> save /Users/maellepaillat/Desktop/image51.png supersample 3
> save /Users/maellepaillat/Desktop/image52.png supersample 3
> show #6 models
> hide #7 models
> save /Users/maellepaillat/Desktop/image53.png supersample 3
> show #11 models
> hide #6 models
> save /Users/maellepaillat/Desktop/image54.png supersample 3
> close #6
> close
> open
> /Users/maellepaillat/Downloads/folds_2025_04_01_09_05(1)/sprb_1123_1645_1720_3952_3971_4934_1677x3_3951_sprf_1646_3972/fold_sprb_1123_1645_1720_3952_3971_4934_1677x3_3951_sprf_1646_3972_model_0.cif
Chain information for
fold_sprb_1123_1645_1720_3952_3971_4934_1677x3_3951_sprf_1646_3972_model_0.cif
#1
---
Chain | Description
A | .
B | .
C | .
D | .
E | .
F | .
G | .
H I J | .
K | .
L | .
M | .
N | .
> select add #1
22511 atoms, 23118 bonds, 2783 residues, 1 model selected
> hide sel atoms
> show sel cartoons
Computing secondary structure
> select /H:1-309
2483 atoms, 2545 bonds, 309 residues, 1 model selected
> color sel #b2d6b9ff
> select /I:1-309
2483 atoms, 2545 bonds, 309 residues, 1 model selected
> color sel #b2d6b9ff
> select /J:1-309
2483 atoms, 2545 bonds, 309 residues, 1 model selected
> color sel #b2d6b9ff
> select /K:1-286
2276 atoms, 2337 bonds, 286 residues, 1 model selected
> select /L:1-306
2528 atoms, 2601 bonds, 306 residues, 1 model selected
> color sel #53878fff
> color sel #54b5c0ff
> color sel #c03a53ff
> color sel #c00f2eff
> select /A:1-100
839 atoms, 866 bonds, 100 residues, 1 model selected
> color sel #af3224ff
> select /B:1-100
837 atoms, 865 bonds, 100 residues, 1 model selected
> color sel #009193ff
> color sel #009051ff
> select /C:1-100
832 atoms, 855 bonds, 100 residues, 1 model selected
> color sel #c57820ff
> select /D:1-100
805 atoms, 829 bonds, 100 residues, 1 model selected
> color sel #008f00ff
> color sel #4f8f00ff
> color sel #008f00ff
> color sel #009051ff
> color sel #2a902aff
> color sel #479057ff
> color sel #509051ff
> color sel #61905cff
> color sel #6d9068ff
> color sel #58905eff
> color sel #699069ff
> color sel #72906dff
> color sel #849069ff
> color sel #63905aff
> color sel #60905dff
> select /E:1-100
836 atoms, 856 bonds, 100 residues, 1 model selected
> color sel #53878fff
> select /F:1-100
804 atoms, 826 bonds, 100 residues, 1 model selected
> color sel #b72a78ff
> select /N:1-285
2249 atoms, 2305 bonds, 285 residues, 1 model selected
> select /G:1-100
826 atoms, 853 bonds, 100 residues, 1 model selected
> color sel #009051ff
> color sel #4d9065ff
> color sel #64906fff
> color sel #799075ff
> color sel #679072ff
> color sel #62905cff
> color sel #65904dff
> color sel #6a9042ff
> color sel #599022ff
> color sel #62903dff
> color sel #63903dff
> color sel #6b904eff
> color sel #6c9053ff
> select /H:1-309
2483 atoms, 2545 bonds, 309 residues, 1 model selected
> color sel #b2d6b9ff
> color sel #009051ff
> color sel #00b669ff
> color sel #00c873ff
> color sel #3ec887ff
> color sel #5ac889ff
> color sel #81c899ff
> color sel #bbc8a6ff
> color sel #77c893ff
> color sel #6ac890ff
> color sel #7bc899ff
> color sel #63c899ff
> color sel #6bc8a4ff
> color sel #4f957aff
> color sel #5bab8cff
> color sel #65be9bff
> color sel #6bc9a4ff
> color sel #b2d6b9ff
> color sel #8db49aff
> select /I:1-309
2483 atoms, 2545 bonds, 309 residues, 1 model selected
> color sel #8db49aff
> select /J:1-309
2483 atoms, 2545 bonds, 309 residues, 1 model selected
> color sel #8db49aff
> select /K:1-286
2276 atoms, 2337 bonds, 286 residues, 1 model selected
> color sel #53878fff
> color sel #54b4bfff
> color sel #7abcbfff
> color sel #91bebfff
> color sel #6fbfb9ff
> color sel #75bcbfff
> color sel #6fb3bfff
> color sel #8db8bfff
> color sel #77bbbfff
> color sel #56b7bfff
> color sel #2dbabfff
> color sel #6fbfb6ff
> color sel #38bfb9ff
> color sel #11bfbbff
> color sel #1fbfbfff
> color sel #1bbbbfff
> color sel #1eccd0ff
> color sel #7eccd0ff
> color sel #9fccd0ff
> color sel #82d0d0ff
> color sel #9cd3d7ff
> select /L:1-306
2528 atoms, 2601 bonds, 306 residues, 1 model selected
> color sel #af3224ff
> color sel #bf8983ff
> color sel #bf7170ff
> select /M:1-279
2230 atoms, 2290 bonds, 279 residues, 1 model selected
> color sel #c57820ff
> color sel #c59857ff
> color sel #c5ad84ff
> color sel #c5a277ff
> color sel #c59b64ff
> color sel #c59e56ff
> color sel #c59a64ff
> color sel #c5a774ff
> color sel #c5a269ff
> select /N:1-285
2249 atoms, 2305 bonds, 285 residues, 1 model selected
> color sel #b72a78ff
> color sel #b76696ff
> color sel #b7769dff
> color sel #c17ca6ff
> select add #1
22511 atoms, 23118 bonds, 2783 residues, 1 model selected
> select subtract #1
Nothing selected
> save /Users/maellepaillat/Desktop/image55.png supersample 3
> save /Users/maellepaillat/Desktop/image56.png supersample 3
> select add #1
22511 atoms, 23118 bonds, 2783 residues, 1 model selected
> hide sel cartoons
> select /A:1-100
839 atoms, 866 bonds, 100 residues, 1 model selected
> show sel cartoons
> select /L:1-306
2528 atoms, 2601 bonds, 306 residues, 1 model selected
> show sel cartoons
> select add #1
22511 atoms, 23118 bonds, 2783 residues, 1 model selected
> select subtract #1
Nothing selected
> save /Users/maellepaillat/Desktop/image57.png supersample 3
> select add #1
22511 atoms, 23118 bonds, 2783 residues, 1 model selected
> hide target m
> select subtract #1
Nothing selected
> select /B:1-100
837 atoms, 865 bonds, 100 residues, 1 model selected
> select add #1
22511 atoms, 23118 bonds, 2783 residues, 1 model selected
> show #1 models
> select subtract #1
Nothing selected
> select /A:1-100
839 atoms, 866 bonds, 100 residues, 1 model selected
> hide sel cartoons
> select /B:1-100
837 atoms, 865 bonds, 100 residues, 1 model selected
> show sel cartoons
> select /L:1-306
2528 atoms, 2601 bonds, 306 residues, 1 model selected
> hide sel cartoons
> select /H:1-309
2483 atoms, 2545 bonds, 309 residues, 1 model selected
> show sel cartoons
> hide sel cartoons
> select /I:1-309
2483 atoms, 2545 bonds, 309 residues, 1 model selected
> show sel cartoons
> select add #1
22511 atoms, 23118 bonds, 2783 residues, 1 model selected
> select subtract #1
Nothing selected
> save /Users/maellepaillat/Desktop/image58.png supersample 3
> select /B:1-100
837 atoms, 865 bonds, 100 residues, 1 model selected
> hide sel cartoons
> select /C:1-100
832 atoms, 855 bonds, 100 residues, 1 model selected
> show sel cartoons
> select /I:1-309
2483 atoms, 2545 bonds, 309 residues, 1 model selected
> hide sel cartoons
> select /K:1-286
2276 atoms, 2337 bonds, 286 residues, 1 model selected
> show sel cartoons
> select add #1
22511 atoms, 23118 bonds, 2783 residues, 1 model selected
> select subtract #1
Nothing selected
> save /Users/maellepaillat/Desktop/image59.png supersample 3
> select /D:1-100
805 atoms, 829 bonds, 100 residues, 1 model selected
> show sel cartoons
> select /C:1-100
832 atoms, 855 bonds, 100 residues, 1 model selected
> hide sel cartoons
> select /K:1-286
2276 atoms, 2337 bonds, 286 residues, 1 model selected
> hide sel cartoons
> select /J:1-309
2483 atoms, 2545 bonds, 309 residues, 1 model selected
> show sel cartoons
> select add #1
22511 atoms, 23118 bonds, 2783 residues, 1 model selected
> select subtract #1
Nothing selected
> save /Users/maellepaillat/Desktop/image60.png supersample 3
> save /Users/maellepaillat/Desktop/image61.png supersample 3
> select /D:1-100
805 atoms, 829 bonds, 100 residues, 1 model selected
> select /D:1-100
805 atoms, 829 bonds, 100 residues, 1 model selected
> hide sel cartoons
> select /J:1-309
2483 atoms, 2545 bonds, 309 residues, 1 model selected
> hide sel cartoons
> select /E:1-100
836 atoms, 856 bonds, 100 residues, 1 model selected
> show sel cartoons
> select /M:1-279
2230 atoms, 2290 bonds, 279 residues, 1 model selected
> show sel cartoons
> select add #1
22511 atoms, 23118 bonds, 2783 residues, 1 model selected
> select subtract #1
Nothing selected
> save /Users/maellepaillat/Desktop/image61.png supersample 3
> view orient
> select /E:1-100
836 atoms, 856 bonds, 100 residues, 1 model selected
> hide sel cartoons
> select /F:1-100
804 atoms, 826 bonds, 100 residues, 1 model selected
> show sel cartoons
> select /M:1-279
2230 atoms, 2290 bonds, 279 residues, 1 model selected
> hide sel cartoons
> select /N:1-285
2249 atoms, 2305 bonds, 285 residues, 1 model selected
> show sel cartoons
> select add #1
22511 atoms, 23118 bonds, 2783 residues, 1 model selected
> select subtract #1
Nothing selected
> save /Users/maellepaillat/Desktop/image62.png supersample 3
> select /F:1-100
804 atoms, 826 bonds, 100 residues, 1 model selected
> hide sel cartoons
> select /G:1-100
826 atoms, 853 bonds, 100 residues, 1 model selected
> show sel cartoons
> select /N:1-285
2249 atoms, 2305 bonds, 285 residues, 1 model selected
> hide sel cartoons
> select /H:1-309
2483 atoms, 2545 bonds, 309 residues, 1 model selected
> show sel cartoons
> select add #1
22511 atoms, 23118 bonds, 2783 residues, 1 model selected
> select subtract #1
Nothing selected
> save /Users/maellepaillat/Desktop/image63.png supersample 3
===== Log before crash end =====
Log:
Startup Messages
---
note | available bundle cache has not been initialized yet
UCSF ChimeraX version: 1.9rc202411190203 (2024-11-19)
© 2016-2024 Regents of the University of California. All rights reserved.
How to cite UCSF ChimeraX
OpenGL version: 4.1 Metal - 89.3
OpenGL renderer: Apple M3 Pro
OpenGL vendor: Apple
Python: 3.11.4
Locale: UTF-8
Qt version: PyQt6 6.7.1, Qt 6.7.1
Qt runtime version: 6.7.3
Qt platform: cocoa
Hardware:
Hardware Overview:
Model Name: MacBook Pro
Model Identifier: Mac15,6
Model Number: Z1AU001V9FN/A
Chip: Apple M3 Pro
Total Number of Cores: 11 (5 performance and 6 efficiency)
Memory: 18 GB
System Firmware Version: 11881.81.4
OS Loader Version: 11881.81.4
Software:
System Software Overview:
System Version: macOS 15.3.1 (24D70)
Kernel Version: Darwin 24.3.0
Time since boot: 28 jours, 5 heures et 56 minutes
Graphics/Displays:
Apple M3 Pro:
Chipset Model: Apple M3 Pro
Type: GPU
Bus: Built-In
Total Number of Cores: 14
Vendor: Apple (0x106b)
Metal Support: Metal 3
Displays:
Color LCD:
Display Type: Built-in Liquid Retina XDR Display
Resolution: 3024 x 1964 Retina
Main Display: Yes
Mirror: Off
Online: Yes
Automatically Adjust Brightness: Yes
Connection Type: Internal
DELL S2421NX:
Resolution: 1920 x 1080 (1080p FHD - Full High Definition)
UI Looks like: 1920 x 1080 @ 75.00Hz
Mirror: Off
Online: Yes
Rotation: Supported
Installed Packages:
alabaster: 1.0.0
appdirs: 1.4.4
appnope: 0.1.4
asttokens: 2.4.1
auditwheel: 6.1.0
babel: 2.16.0
beautifulsoup4: 4.12.3
blockdiag: 3.0.0
blosc2: 2.7.1
build: 1.2.1
certifi: 2023.11.17
cftime: 1.6.4.post1
charset-normalizer: 3.4.0
ChimeraX-AddCharge: 1.5.18
ChimeraX-AddH: 2.2.6
ChimeraX-AlignmentAlgorithms: 2.0.2
ChimeraX-AlignmentHdrs: 3.5
ChimeraX-AlignmentMatrices: 2.1
ChimeraX-Alignments: 2.16.1
ChimeraX-AlphaFold: 1.0.1
ChimeraX-AltlocExplorer: 1.1.2
ChimeraX-AmberInfo: 1.0
ChimeraX-Arrays: 1.1
ChimeraX-Atomic: 1.58.7
ChimeraX-AtomicLibrary: 14.1.11
ChimeraX-AtomSearch: 2.0.1
ChimeraX-AxesPlanes: 2.4
ChimeraX-BasicActions: 1.1.2
ChimeraX-BILD: 1.0
ChimeraX-BlastProtein: 2.4.7
ChimeraX-BondRot: 2.0.4
ChimeraX-BugReporter: 1.0.1
ChimeraX-BuildStructure: 2.13.1
ChimeraX-Bumps: 1.0
ChimeraX-BundleBuilder: 1.4.0
ChimeraX-ButtonPanel: 1.0.1
ChimeraX-CageBuilder: 1.0.1
ChimeraX-CellPack: 1.0
ChimeraX-Centroids: 1.4
ChimeraX-ChangeChains: 1.1
ChimeraX-CheckWaters: 1.4
ChimeraX-ChemGroup: 2.0.1
ChimeraX-Clashes: 2.3
ChimeraX-ColorActions: 1.0.5
ChimeraX-ColorGlobe: 1.0
ChimeraX-ColorKey: 1.5.6
ChimeraX-CommandLine: 1.2.5
ChimeraX-ConnectStructure: 2.0.1
ChimeraX-Contacts: 1.0.1
ChimeraX-Core: 1.9rc202411190203
ChimeraX-CoreFormats: 1.2
ChimeraX-coulombic: 1.4.4
ChimeraX-Crosslinks: 1.0
ChimeraX-Crystal: 1.0
ChimeraX-CrystalContacts: 1.0.1
ChimeraX-DataFormats: 1.2.3
ChimeraX-Dicom: 1.2.6
ChimeraX-DistMonitor: 1.4.2
ChimeraX-DockPrep: 1.1.3
ChimeraX-Dssp: 2.0
ChimeraX-EMDB-SFF: 1.0
ChimeraX-ESMFold: 1.0
ChimeraX-FileHistory: 1.0.1
ChimeraX-FunctionKey: 1.0.1
ChimeraX-Geometry: 1.3
ChimeraX-gltf: 1.0
ChimeraX-Graphics: 1.4.1
ChimeraX-Hbonds: 2.5
ChimeraX-Help: 1.3
ChimeraX-HKCage: 1.3
ChimeraX-IHM: 1.1
ChimeraX-ImageFormats: 1.2
ChimeraX-IMOD: 1.0
ChimeraX-IO: 1.0.3
ChimeraX-ItemsInspection: 1.0.1
ChimeraX-IUPAC: 1.0
ChimeraX-KVFinder: 1.2.1
ChimeraX-Label: 1.1.11
ChimeraX-ListInfo: 1.2.2
ChimeraX-Log: 1.2
ChimeraX-LookingGlass: 1.1
ChimeraX-Maestro: 1.9.1
ChimeraX-Map: 1.3
ChimeraX-MapData: 2.0
ChimeraX-MapEraser: 1.0.1
ChimeraX-MapFilter: 2.0.1
ChimeraX-MapFit: 2.0
ChimeraX-MapSeries: 2.1.1
ChimeraX-Markers: 1.0.1
ChimeraX-Mask: 1.0.2
ChimeraX-MatchMaker: 2.1.6
ChimeraX-MCopy: 1.0
ChimeraX-MDcrds: 2.7.2
ChimeraX-MedicalToolbar: 1.1
ChimeraX-Meeting: 1.0.1
ChimeraX-MLP: 1.1.1
ChimeraX-mmCIF: 2.14.2
ChimeraX-MMTF: 2.2
ChimeraX-ModelArchive: 1.0
ChimeraX-Modeller: 1.5.18
ChimeraX-ModelPanel: 1.5
ChimeraX-ModelSeries: 1.0.1
ChimeraX-Mol2: 2.0.3
ChimeraX-Mole: 1.0
ChimeraX-Morph: 1.0.2
ChimeraX-MouseModes: 1.2
ChimeraX-Movie: 1.0
ChimeraX-MutationScores: 1.0
ChimeraX-Neuron: 1.0
ChimeraX-Nifti: 1.2
ChimeraX-NMRSTAR: 1.0.2
ChimeraX-NRRD: 1.2
ChimeraX-Nucleotides: 2.0.3
ChimeraX-OpenCommand: 1.14
ChimeraX-OrthoPick: 1.0.1
ChimeraX-PDB: 2.7.6
ChimeraX-PDBBio: 1.0.1
ChimeraX-PDBLibrary: 1.0.4
ChimeraX-PDBMatrices: 1.0
ChimeraX-PickBlobs: 1.0.1
ChimeraX-Positions: 1.0
ChimeraX-PresetMgr: 1.1.2
ChimeraX-PubChem: 2.2
ChimeraX-ReadPbonds: 1.0.1
ChimeraX-Registration: 1.1.2
ChimeraX-RemoteControl: 1.0
ChimeraX-RenderByAttr: 1.6.1
ChimeraX-RenumberResidues: 1.1
ChimeraX-ResidueFit: 1.0.1
ChimeraX-RestServer: 1.3.1
ChimeraX-RNALayout: 1.0
ChimeraX-RotamerLibMgr: 4.0
ChimeraX-RotamerLibsDunbrack: 2.0
ChimeraX-RotamerLibsDynameomics: 2.0
ChimeraX-RotamerLibsRichardson: 2.0
ChimeraX-SaveCommand: 1.5.1
ChimeraX-SchemeMgr: 1.0
ChimeraX-SDF: 2.0.2
ChimeraX-Segger: 1.0
ChimeraX-Segment: 1.0.1
ChimeraX-Segmentations: 3.3.0
ChimeraX-SelInspector: 1.0
ChimeraX-SeqView: 2.14
ChimeraX-Shape: 1.0.1
ChimeraX-Shell: 1.0.1
ChimeraX-Shortcuts: 1.2.0
ChimeraX-ShowSequences: 1.0.3
ChimeraX-SideView: 1.0.1
ChimeraX-SimilarStructures: 1.0.1
ChimeraX-Smiles: 2.1.2
ChimeraX-SmoothLines: 1.0
ChimeraX-SpaceNavigator: 1.0
ChimeraX-StdCommands: 1.18.1
ChimeraX-STL: 1.0.1
ChimeraX-Storm: 1.0
ChimeraX-StructMeasure: 1.2.1
ChimeraX-Struts: 1.0.1
ChimeraX-Surface: 1.0.1
ChimeraX-SwapAA: 2.0.1
ChimeraX-SwapRes: 2.5
ChimeraX-TapeMeasure: 1.0
ChimeraX-TaskManager: 1.0
ChimeraX-Test: 1.0
ChimeraX-Toolbar: 1.2.3
ChimeraX-ToolshedUtils: 1.2.4
ChimeraX-Topography: 1.0
ChimeraX-ToQuest: 1.0
ChimeraX-Tug: 1.0.1
ChimeraX-UI: 1.41
ChimeraX-Umap: 1.0
ChimeraX-uniprot: 2.3.1
ChimeraX-UnitCell: 1.0.1
ChimeraX-ViewDockX: 1.4.4
ChimeraX-VIPERdb: 1.0
ChimeraX-Vive: 1.1
ChimeraX-VolumeMenu: 1.0.1
ChimeraX-vrml: 1.0
ChimeraX-VTK: 1.0
ChimeraX-WavefrontOBJ: 1.0
ChimeraX-WebCam: 1.0.2
ChimeraX-WebServices: 1.1.4
ChimeraX-Zone: 1.0.1
colorama: 0.4.6
comm: 0.2.2
contourpy: 1.3.1
cxservices: 1.2.3
cycler: 0.12.1
Cython: 3.0.10
debugpy: 1.8.8
decorator: 5.1.1
docutils: 0.21.2
executing: 2.1.0
filelock: 3.15.4
fonttools: 4.55.0
funcparserlib: 2.0.0a0
glfw: 2.7.0
grako: 3.16.5
h5py: 3.12.1
html2text: 2024.2.26
idna: 3.10
ihm: 1.3
imagecodecs: 2024.6.1
imagesize: 1.4.1
ipykernel: 6.29.5
ipython: 8.26.0
ipywidgets: 8.1.5
jedi: 0.19.1
Jinja2: 3.1.4
jupyter_client: 8.6.2
jupyter_core: 5.7.2
jupyterlab_widgets: 3.0.13
kiwisolver: 1.4.7
line_profiler: 4.1.3
lxml: 5.2.2
lz4: 4.3.3
MarkupSafe: 3.0.2
matplotlib: 3.9.2
matplotlib-inline: 0.1.7
msgpack: 1.0.8
ndindex: 1.9.2
nest-asyncio: 1.6.0
netCDF4: 1.6.5
networkx: 3.3
nibabel: 5.2.0
nptyping: 2.5.0
numexpr: 2.10.1
numpy: 1.26.4
openvr: 1.26.701
packaging: 23.2
ParmEd: 4.2.2
parso: 0.8.4
pep517: 0.13.1
pexpect: 4.9.0
pillow: 10.4.0
pip: 24.2
pkginfo: 1.11.1
platformdirs: 4.3.6
prompt_toolkit: 3.0.48
psutil: 6.0.0
ptyprocess: 0.7.0
pure_eval: 0.2.3
py-cpuinfo: 9.0.0
pycollada: 0.8
pydicom: 2.4.4
pyelftools: 0.31
Pygments: 2.18.0
pynmrstar: 3.3.4
pynrrd: 1.0.0
PyOpenGL: 3.1.7
PyOpenGL-accelerate: 3.1.7
pyopenxr: 1.0.3401
pyparsing: 3.2.0
pyproject_hooks: 1.2.0
PyQt6-commercial: 6.7.1
PyQt6-Qt6: 6.7.3
PyQt6-WebEngine-commercial: 6.7.0
PyQt6-WebEngine-Qt6: 6.7.3
PyQt6-WebEngineSubwheel-Qt6: 6.7.3
PyQt6_sip: 13.8.0
python-dateutil: 2.9.0.post0
pytz: 2024.2
pyzmq: 26.2.0
qtconsole: 5.5.2
QtPy: 2.4.2
qtshim: 1.0
RandomWords: 0.4.0
requests: 2.32.3
scipy: 1.14.0
setuptools: 72.1.0
sfftk-rw: 0.8.1
six: 1.16.0
snowballstemmer: 2.2.0
sortedcontainers: 2.4.0
soupsieve: 2.6
Sphinx: 8.0.2
sphinx-autodoc-typehints: 2.2.3
sphinxcontrib-applehelp: 2.0.0
sphinxcontrib-blockdiag: 3.0.0
sphinxcontrib-devhelp: 2.0.0
sphinxcontrib-htmlhelp: 2.1.0
sphinxcontrib-jsmath: 1.0.1
sphinxcontrib-qthelp: 2.0.0
sphinxcontrib-serializinghtml: 2.0.0
stack-data: 0.6.3
superqt: 0.6.3
tables: 3.10.1
tcia_utils: 1.5.1
tifffile: 2024.7.24
tinyarray: 1.2.4
tornado: 6.4.1
traitlets: 5.14.3
typing_extensions: 4.12.2
tzdata: 2024.2
urllib3: 2.2.3
wcwidth: 0.2.13
webcolors: 24.6.0
wheel: 0.43.0
wheel-filename: 1.4.1
widgetsnbextension: 4.0.13
Change History (2)
comment:1 by , 7 months ago
| Component: | Unassigned → Window Toolkit |
|---|---|
| Owner: | set to |
| Platform: | → all |
| Project: | → ChimeraX |
| Status: | new → assigned |
| Summary: | ChimeraX bug report submission → Crash moving window between screens |
comment:2 by , 7 months ago
| Resolution: | → duplicate |
|---|---|
| Status: | assigned → closed |
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