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Changes between Initial Version and Version 1 of Ticket #17222

Timestamp:: Mar 27, 2025, 10:34:40 AM (7 months ago)
Author:: Eric Pettersen
Comment:

Legend:

: Unmodified
: Added
: Removed
: Modified

Ticket #17222
- Property Cc Tom Goddard added
- Property Component Unassigned → Third Party
- Property Owner set to Tristan Croll
- Property Platform → all
- Property Project → ChimeraX
- Property Status new → assigned
- Property Summary ChimeraX bug report submission → ISOLDE: ResidueStepper's 'positions' attribute is None

Ticket #17222 – Description

-              initial
+              v1
 > close #2
+> open "/Users/rafaelrocha/Library/CloudStorage/GoogleDrive-
+> rafael.eduardo.oliveira.rocha@gmail.com/Other computers/My
+> Computer/supercomplex/supercomplexV-
+> IV2-II/cryosparc_P43_J450_008_volume_map_sharp_NOSEQ/superComplexConsolidation/superComplexConsolidatedV1.cif"
+Summary of feedback from opening
+/Users/rafaelrocha/Library/CloudStorage/GoogleDrive-
+rafael.eduardo.oliveira.rocha@gmail.com/Other computers/My
+Computer/supercomplex/supercomplexV-
+IV2-II/cryosparc_P43_J450_008_volume_map_sharp_NOSEQ/superComplexConsolidation/superComplexConsolidatedV1.cif
+---
+warnings | Unknown polymer entity '1' on line 333
+Unknown polymer entity '2' on line 1763
+Unknown polymer entity '3' on line 2594
+Unknown polymer entity '4' on line 4478
+Unknown polymer entity '5' on line 5142
+messages similar to the above omitted
+Atom C13 is not in the residue template for HE9 /HM:1
+Atom OMA is not in the residue template for HEM /HM:1
+Missing or incomplete sequence information. Inferred polymer connectivity.
+Chain information for superComplexConsolidatedV1.cif #1
+---
+Chain | Description
+A | No description available
+A0 | No description available
+AG t3 | No description available
+AU | No description available
+Ab | No description available
+Aj | No description available
+Aq | No description available
+Ar t4 | No description available
+B | No description available
+BI | No description available
+BK | No description available
+BP | No description available
+C | No description available
+C0 C1 C2 C3 C5 C6 C7 C8 C9 | No description available
+C4 | No description available
+D | No description available
+D6 | No description available
+E | No description available
+E1 | No description available
+E4 | No description available
+Ek | No description available
+Eq | No description available
+Es | No description available
+Ev | No description available
+F9 | No description available
+FF | No description available
+FH | No description available
+FL | No description available
+FO | No description available
+Fy | No description available
+Fz | No description available
+GT | No description available
+I0 tb | No description available
+IE | No description available
+IY | No description available
+Il td | No description available
+Ix t9 | No description available
+Iy tc | No description available
+J6 t1 | No description available
+JC | No description available
+JI | No description available
+JJ t6 | No description available
+JN tf | No description available
+Jw t8 | No description available
+Jx | No description available
+K5 | No description available
+KI t5 | No description available
+Ke | No description available
+Kp | No description available
+Ks te | No description available
+L3 | No description available
+LG | No description available
+LO t2 | No description available
+LR | No description available
+LY tg | No description available
+M | No description available
+Mg | No description available
+Mq | No description available
+Mr t0 | No description available
+NF | No description available
+NM | No description available
+Np t7 | No description available
+R | No description available
+TB | No description available
+Y ta | No description available
+a | No description available
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+Chain information for superComplexConsolidatedV1.cif
+---
+Chain | Description
+.2/A | No description available
+.2/A0 | No description available
+.2/AG 1.2/t3 | No description available
+.2/AU | No description available
+.2/Ab | No description available
+.2/Aj | No description available
+.2/Aq | No description available
+.2/Ar 1.2/t4 | No description available
+.2/B | No description available
+.2/BI | No description available
+.2/BK | No description available
+.2/BP | No description available
+.2/C | No description available
+.2/C0 1.2/C1 1.2/C2 1.2/C3 1.2/C5 1.2/C6 1.2/C7 1.2/C8 1.2/C9 | No description available
+.2/C4 | No description available
+.2/D | No description available
+.2/D6 | No description available
+.2/E | No description available
+.2/E1 | No description available
+.2/E4 | No description available
+.2/Ek | No description available
+.2/Eq | No description available
+.2/Es | No description available
+.2/Ev | No description available
+.2/F9 | No description available
+.2/FF | No description available
+.2/FH | No description available
+.2/FL | No description available
+.2/FO | No description available
+.2/Fy | No description available
+.2/Fz | No description available
+.2/GT | No description available
+.2/I0 1.2/tb | No description available
+.2/IE | No description available
+.2/IY | No description available
+.2/Il 1.2/td | No description available
+.2/Ix 1.2/t9 | No description available
+.2/Iy 1.2/tc | No description available
+.2/J6 1.2/t1 | No description available
+.2/JC | No description available
+.2/JI | No description available
+.2/JJ 1.2/t6 | No description available
+.2/JN 1.2/tf | No description available
+.2/Jw 1.2/t8 | No description available
+.2/Jx | No description available
+.2/K5 | No description available
+.2/KI 1.2/t5 | No description available
+.2/Ke | No description available
+.2/Kp | No description available
+.2/Ks 1.2/te | No description available
+.2/L3 | No description available
+.2/LG | No description available
+.2/LO 1.2/t2 | No description available
+.2/LR | No description available
+.2/LY 1.2/tg | No description available
+.2/M | No description available
+.2/Mg | No description available
+.2/Mq | No description available
+.2/Mr 1.2/t0 | No description available
+.2/NF | No description available
+.2/NM | No description available
+.2/Np 1.2/t7 | No description available
+.2/R | No description available
+.2/TB | No description available
+.2/Y 1.2/ta | No description available
+.2/a | No description available
+> delete ~#2/GT&#2
+> delete ~#1/GT&#1
+> select clear
+> save "/Users/rafaelrocha/Library/CloudStorage/GoogleDrive-
+> rafael.eduardo.oliveira.rocha@gmail.com/Other computers/My
+> Computer/supercomplex/supercomplexV-
+> IV2-II/cryosparc_P43_J450_008_volume_map_sharp_NOSEQ/superComplexConsolidation/GT.pdb"
+> open "/Users/rafaelrocha/Library/CloudStorage/GoogleDrive-
+> rafael.eduardo.oliveira.rocha@gmail.com/Other computers/My
+> Computer/supercomplex/supercomplexV-
+> IV2-II/cryosparc_P43_J450_008_volume_map_sharp_NOSEQ/superComplexConsolidation/GT.pdb"
+Chain information for GT.pdb #2
+---
+Chain | Description
+GT | No description available
+> close #2
+> open "/Users/rafaelrocha/Library/CloudStorage/GoogleDrive-
+> rafael.eduardo.oliveira.rocha@gmail.com/Other computers/My
+> Computer/supercomplex/supercomplexV-
+> IV2-II/cryosparc_P43_J450_008_volume_map_sharp_NOSEQ/superComplexConsolidation/GT2.pdb"
+Chain information for GT2.pdb #2
+---
+Chain | Description
+GT | No description available
+Computing secondary structure
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+Chain information for GT2.pdb
+---
+Chain | Description
+.2/GT | No description available
+> hide #!1 models
+> hide #1.1 models
+> hide #!1.2 models
+> hide #1.3 models
+> addh #2 hbond false
+Summary of feedback from adding hydrogens to GT2.pdb #2.2
+---
+warning | Not adding hydrogens to GT2.pdb #2.2/GT ALA 93 CA because it is missing heavy-atom bond partners
+notes | No usable SEQRES records for GT2.pdb (#2.2) chain GT; guessing termini instead
+Chain-initial residues that are actual N termini: GT2.pdb #2.2/GT ALA 6
+Chain-initial residues that are not actual N termini:
+Chain-final residues that are actual C termini:
+Chain-final residues that are not actual C termini: GT2.pdb #2.2/GT ALA 93
+GT2.pdb #2.2/GT ALA 93 is not terminus, removing H atom from 'C'
+hydrogens added
+> close session
+> open "/Users/rafaelrocha/Library/CloudStorage/GoogleDrive-
+> rafael.eduardo.oliveira.rocha@gmail.com/Other computers/My
+> Computer/supercomplex/supercomplexV-
+> IV2-II/cryosparc_P43_J450_008_volume_map_sharp_NOSEQ/superComplexConsolidation/superComplexConsolidatedV1.cif"
+Summary of feedback from opening
+/Users/rafaelrocha/Library/CloudStorage/GoogleDrive-
+rafael.eduardo.oliveira.rocha@gmail.com/Other computers/My
+Computer/supercomplex/supercomplexV-
+IV2-II/cryosparc_P43_J450_008_volume_map_sharp_NOSEQ/superComplexConsolidation/superComplexConsolidatedV1.cif
+---
+warnings | Unknown polymer entity '1' on line 333
+Unknown polymer entity '2' on line 1763
+Unknown polymer entity '3' on line 2594
+Unknown polymer entity '4' on line 4478
+Unknown polymer entity '5' on line 5142
+messages similar to the above omitted
+Atom C13 is not in the residue template for HE9 /HM:1
+Atom OMA is not in the residue template for HEM /HM:1
+Missing or incomplete sequence information. Inferred polymer connectivity.
+Chain information for superComplexConsolidatedV1.cif #1
+---
+Chain | Description
+A | No description available
+A0 | No description available
+AG t3 | No description available
+AU | No description available
+Ab | No description available
+Aj | No description available
+Aq | No description available
+Ar t4 | No description available
+B | No description available
+BI | No description available
+BK | No description available
+BP | No description available
+C | No description available
+C0 C1 C2 C3 C5 C6 C7 C8 C9 | No description available
+C4 | No description available
+D | No description available
+D6 | No description available
+E | No description available
+E1 | No description available
+E4 | No description available
+Ek | No description available
+Eq | No description available
+Es | No description available
+Ev | No description available
+F9 | No description available
+FF | No description available
+FH | No description available
+FL | No description available
+FO | No description available
+Fy | No description available
+Fz | No description available
+GT | No description available
+I0 tb | No description available
+IE | No description available
+IY | No description available
+Il td | No description available
+Ix t9 | No description available
+Iy tc | No description available
+J6 t1 | No description available
+JC | No description available
+JI | No description available
+JJ t6 | No description available
+JN tf | No description available
+Jw t8 | No description available
+Jx | No description available
+K5 | No description available
+KI t5 | No description available
+Ke | No description available
+Kp | No description available
+Ks te | No description available
+L3 | No description available
+LG | No description available
+LO t2 | No description available
+LR | No description available
+LY tg | No description available
+M | No description available
+Mg | No description available
+Mq | No description available
+Mr t0 | No description available
+NF | No description available
+NM | No description available
+Np t7 | No description available
+R | No description available
+TB | No description available
+Y ta | No description available
+a | No description available
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+Chain information for superComplexConsolidatedV1.cif
+---
+Chain | Description
+.2/A | No description available
+.2/A0 | No description available
+.2/AG 1.2/t3 | No description available
+.2/AU | No description available
+.2/Ab | No description available
+.2/Aj | No description available
+.2/Aq | No description available
+.2/Ar 1.2/t4 | No description available
+.2/B | No description available
+.2/BI | No description available
+.2/BK | No description available
+.2/BP | No description available
+.2/C | No description available
+.2/C0 1.2/C1 1.2/C2 1.2/C3 1.2/C5 1.2/C6 1.2/C7 1.2/C8 1.2/C9 | No description available
+.2/C4 | No description available
+.2/D | No description available
+.2/D6 | No description available
+.2/E | No description available
+.2/E1 | No description available
+.2/E4 | No description available
+.2/Ek | No description available
+.2/Eq | No description available
+.2/Es | No description available
+.2/Ev | No description available
+.2/F9 | No description available
+.2/FF | No description available
+.2/FH | No description available
+.2/FL | No description available
+.2/FO | No description available
+.2/Fy | No description available
+.2/Fz | No description available
+.2/GT | No description available
+.2/I0 1.2/tb | No description available
+.2/IE | No description available
+.2/IY | No description available
+.2/Il 1.2/td | No description available
+.2/Ix 1.2/t9 | No description available
+.2/Iy 1.2/tc | No description available
+.2/J6 1.2/t1 | No description available
+.2/JC | No description available
+.2/JI | No description available
+.2/JJ 1.2/t6 | No description available
+.2/JN 1.2/tf | No description available
+.2/Jw 1.2/t8 | No description available
+.2/Jx | No description available
+.2/K5 | No description available
+.2/KI 1.2/t5 | No description available
+.2/Ke | No description available
+.2/Kp | No description available
+.2/Ks 1.2/te | No description available
+.2/L3 | No description available
+.2/LG | No description available
+.2/LO 1.2/t2 | No description available
+.2/LR | No description available
+.2/LY 1.2/tg | No description available
+.2/M | No description available
+.2/Mg | No description available
+.2/Mq | No description available
+.2/Mr 1.2/t0 | No description available
+.2/NF | No description available
+.2/NM | No description available
+.2/Np 1.2/t7 | No description available
+.2/R | No description available
+.2/TB | No description available
+.2/Y 1.2/ta | No description available
+.2/a | No description available
+> select clear
+> select #1/GT
+atoms, 2100 bonds, 92 residues, 1 model selected
+> delete #1/GT
+> open "/Users/rafaelrocha/Library/CloudStorage/GoogleDrive-
+> rafael.eduardo.oliveira.rocha@gmail.com/Other computers/My
+> Computer/supercomplex/supercomplexV-
+> IV2-II/cryosparc_P43_J450_008_volume_map_sharp_NOSEQ/superComplexConsolidation/GT2.pdb"
+Chain information for GT2.pdb #2
+---
+Chain | Description
+GT | No description available
+Computing secondary structure
+> combine #1,2
+> close #1
+> close #2
+> rename #3 id #1
+> cd "/Users/rafaelrocha/Library/CloudStorage/GoogleDrive-
+> rafael.eduardo.oliveira.rocha@gmail.com/Other computers/My
+> Computer/supercomplex/supercomplexV-
+> IV2-II/cryosparc_P43_J450_008_volume_map_sharp_NOSEQ/superComplexConsolidation"
+Current working directory is:
+/Users/rafaelrocha/Library/CloudStorage/GoogleDrive-
+rafael.eduardo.oliveira.rocha@gmail.com/Other computers/My
+Computer/supercomplex/supercomplexV-
+IV2-II/cryosparc_P43_J450_008_volume_map_sharp_NOSEQ/superComplexConsolidation
+> runscript /Users/rafaelrocha/Library/CloudStorage/OneDrive-
+> Personal/GitHub/KRSPs/modelangeloScripts/correctStructureSequences.py False
+> info #1 saveFile chainsInfoTMP.txt
+> select #1/AG
+atoms, 1462 bonds, 179 residues, 1 model selected
+> save chainsTMP/AG_uu.pdb format pdb models #1/AG selectedOnly true
+> open chainsTMP/AG_uu_Mod.pdb
+Chain information for AG_uu_Mod.pdb #2
+---
+Chain | Description
+AG | No description available
+> select #1/Ar
+atoms, 860 bonds, 96 residues, 1 model selected
+> save chainsTMP/Ar_ul.pdb format pdb models #1/Ar selectedOnly true
+> open chainsTMP/Ar_ul_Mod.pdb
+Chain information for Ar_ul_Mod.pdb #3
+---
+Chain | Description
+Ar | No description available
+> select #1/I0
+atoms, 1936 bonds, 225 residues, 1 model selected
+> save chainsTMP/I0_un.pdb format pdb models #1/I0 selectedOnly true
+> open chainsTMP/I0_un_Mod.pdb
+Chain information for I0_un_Mod.pdb #4
+---
+Chain | Description
+I0 | No description available
+> select #1/Il
+atoms, 688 bonds, 79 residues, 1 model selected
+> save chainsTMP/Il_ul.pdb format pdb models #1/Il selectedOnly true
+> open chainsTMP/Il_ul_Mod.pdb
+Chain information for Il_ul_Mod.pdb #5
+---
+Chain | Description
+Il | No description available
+> select #1/Ix
+atoms, 1145 bonds, 128 residues, 1 model selected
+> save chainsTMP/Ix_ul.pdb format pdb models #1/Ix selectedOnly true
+> open chainsTMP/Ix_ul_Mod.pdb
+Chain information for Ix_ul_Mod.pdb #6
+---
+Chain | Description
+Ix | No description available
+> select #1/Iy
+atoms, 763 bonds, 94 residues, 1 model selected
+> save chainsTMP/Iy_ul.pdb format pdb models #1/Iy selectedOnly true
+> open chainsTMP/Iy_ul_Mod.pdb
+Chain information for Iy_ul_Mod.pdb #7
+---
+Chain | Description
+Iy | No description available
+> select #1/J6
+atoms, 1663 bonds, 198 residues, 1 model selected
+> save chainsTMP/J6_un.pdb format pdb models #1/J6 selectedOnly true
+> open chainsTMP/J6_un_Mod.pdb
+Chain information for J6_un_Mod.pdb #8
+---
+Chain | Description
+J6 | No description available
+> select #1/JI
+atoms, 3705 bonds, 1 pseudobond, 475 residues, 2 models selected
+> save chainsTMP/JI_uu.pdb format pdb models #1/JI selectedOnly true
+> open chainsTMP/JI_uu_Mod.pdb
+Chain information for JI_uu_Mod.pdb #9
+---
+Chain | Description
+JI | No description available
+> select #1/JJ
+atoms, 4842 bonds, 552 residues, 1 model selected
+> save chainsTMP/JJ_uu.pdb format pdb models #1/JJ selectedOnly true
+> open chainsTMP/JJ_uu_Mod.pdb
+Chain information for JJ_uu_Mod.pdb #10
+---
+Chain | Description
+JJ | No description available
+> select #1/JN
+atoms, 900 bonds, 107 residues, 1 model selected
+> save chainsTMP/JN_uu.pdb format pdb models #1/JN selectedOnly true
+> open chainsTMP/JN_uu_Mod.pdb
+Chain information for JN_uu_Mod.pdb #11
+---
+Chain | Description
+JN | No description available
+> select #1/Jw
+atoms, 1193 bonds, 125 residues, 1 model selected
+> save chainsTMP/Jw_ul.pdb format pdb models #1/Jw selectedOnly true
+> open chainsTMP/Jw_ul_Mod.pdb
+Chain information for Jw_ul_Mod.pdb #12
+---
+Chain | Description
+Jw | No description available
+> select #1/Jx
+atoms, 976 bonds, 114 residues, 1 model selected
+> save chainsTMP/Jx_ul.pdb format pdb models #1/Jx selectedOnly true
+> open chainsTMP/Jx_ul_Mod.pdb
+Chain information for Jx_ul_Mod.pdb #13
+---
+Chain | Description
+Jx | No description available
+> select #1/K5
+atoms, 3864 bonds, 6 pseudobonds, 498 residues, 2 models selected
+> save chainsTMP/K5_un.pdb format pdb models #1/K5 selectedOnly true
+> open chainsTMP/K5_un_Mod.pdb
+Chain information for K5_un_Mod.pdb #14
+---
+Chain | Description
+K5 | No description available
+> select #1/KI
+atoms, 1730 bonds, 201 residues, 1 model selected
+> save chainsTMP/KI_uu.pdb format pdb models #1/KI selectedOnly true
+> open chainsTMP/KI_uu_Mod.pdb
+Chain information for KI_uu_Mod.pdb #15
+---
+Chain | Description
+KI | No description available
+> select #1/Ke
+atoms, 764 bonds, 95 residues, 1 model selected
+> save chainsTMP/Ke_ul.pdb format pdb models #1/Ke selectedOnly true
+> open chainsTMP/Ke_ul_Mod.pdb
+Chain information for Ke_ul_Mod.pdb #16
+---
+Chain | Description
+Ke | No description available
+> select #1/Kp
+atoms, 1414 bonds, 172 residues, 1 model selected
+> save chainsTMP/Kp_ul.pdb format pdb models #1/Kp selectedOnly true
+> open chainsTMP/Kp_ul_Mod.pdb
+Chain information for Kp_ul_Mod.pdb #17
+---
+Chain | Description
+Kp | No description available
+> select #1/Ks
+atoms, 1375 bonds, 153 residues, 1 model selected
+> save chainsTMP/Ks_ul.pdb format pdb models #1/Ks selectedOnly true
+> open chainsTMP/Ks_ul_Mod.pdb
+Chain information for Ks_ul_Mod.pdb #18
+---
+Chain | Description
+Ks | No description available
+> select #1/L3
+atoms, 1253 bonds, 3 pseudobonds, 157 residues, 2 models selected
+> save chainsTMP/L3_un.pdb format pdb models #1/L3 selectedOnly true
+> open chainsTMP/L3_un_Mod.pdb
+Chain information for L3_un_Mod.pdb #19
+---
+Chain | Description
+L3 | No description available
+> select #1/LG
+atoms, 954 bonds, 105 residues, 1 model selected
+> save chainsTMP/LG_uu.pdb format pdb models #1/LG selectedOnly true
+> open chainsTMP/LG_uu_Mod.pdb
+Chain information for LG_uu_Mod.pdb #20
+---
+Chain | Description
+LG | No description available
+> select #1/LO
+atoms, 2626 bonds, 308 residues, 1 model selected
+> save chainsTMP/LO_uu.pdb format pdb models #1/LO selectedOnly true
+> open chainsTMP/LO_uu_Mod.pdb
+Chain information for LO_uu_Mod.pdb #21
+---
+Chain | Description
+LO | No description available
+> select #1/LR
+atoms, 561 bonds, 71 residues, 1 model selected
+> save chainsTMP/LR_uu.pdb format pdb models #1/LR selectedOnly true
+> open chainsTMP/LR_uu_Mod.pdb
+Chain information for LR_uu_Mod.pdb #22
+---
+Chain | Description
+LR | No description available
+> select #1/LY
+atoms, 1441 bonds, 165 residues, 1 model selected
+> save chainsTMP/LY_uu.pdb format pdb models #1/LY selectedOnly true
+> open chainsTMP/LY_uu_Mod.pdb
+Chain information for LY_uu_Mod.pdb #23
+---
+Chain | Description
+LY | No description available
+> select #1/M
+atoms, 841 bonds, 102 residues, 1 model selected
+> save chainsTMP/M_u.pdb format pdb models #1/M selectedOnly true
+> open chainsTMP/M_u_Mod.pdb
+Chain information for M_u_Mod.pdb #24
+---
+Chain | Description
+M | No description available
+> select #1/Mg
+atoms, 1875 bonds, 215 residues, 1 model selected
+> save chainsTMP/Mg_ul.pdb format pdb models #1/Mg selectedOnly true
+> open chainsTMP/Mg_ul_Mod.pdb
+Chain information for Mg_ul_Mod.pdb #25
+---
+Chain | Description
+Mg | No description available
+> select #1/Mq
+atoms, 492 bonds, 57 residues, 1 model selected
+> save chainsTMP/Mq_ul.pdb format pdb models #1/Mq selectedOnly true
+> open chainsTMP/Mq_ul_Mod.pdb
+Chain information for Mq_ul_Mod.pdb #26
+---
+Chain | Description
+Mq | No description available
+> select #1/Mr
+atoms, 882 bonds, 110 residues, 1 model selected
+> save chainsTMP/Mr_ul.pdb format pdb models #1/Mr selectedOnly true
+> open chainsTMP/Mr_ul_Mod.pdb
+Chain information for Mr_ul_Mod.pdb #27
+---
+Chain | Description
+Mr | No description available
+> select #1/NF
+atoms, 1677 bonds, 1 pseudobond, 212 residues, 2 models selected
+> save chainsTMP/NF_uu.pdb format pdb models #1/NF selectedOnly true
+> open chainsTMP/NF_uu_Mod.pdb
+Chain information for NF_uu_Mod.pdb #28
+---
+Chain | Description
+NF | No description available
+> select #1/NM
+atoms, 518 bonds, 63 residues, 1 model selected
+> save chainsTMP/NM_uu.pdb format pdb models #1/NM selectedOnly true
+> open chainsTMP/NM_uu_Mod.pdb
+Chain information for NM_uu_Mod.pdb #29
+---
+Chain | Description
+NM | No description available
+> select #1/Np
+atoms, 2578 bonds, 285 residues, 1 model selected
+> save chainsTMP/Np_ul.pdb format pdb models #1/Np selectedOnly true
+> open chainsTMP/Np_ul_Mod.pdb
+Chain information for Np_ul_Mod.pdb #30
+---
+Chain | Description
+Np | No description available
+> select #1/TB
+atoms, 485 bonds, 64 residues, 1 model selected
+> save chainsTMP/TB_uu.pdb format pdb models #1/TB selectedOnly true
+> open chainsTMP/TB_uu_Mod.pdb
+Chain information for TB_uu_Mod.pdb #31
+---
+Chain | Description
+TB | No description available
+> select #1/Y
+atoms, 1789 bonds, 211 residues, 1 model selected
+> save chainsTMP/Y_u.pdb format pdb models #1/Y selectedOnly true
+> open chainsTMP/Y_u_Mod.pdb
+Chain information for Y_u_Mod.pdb #32
+---
+Chain | Description
+Y | No description available
+> select #1/t0
+atoms, 883 bonds, 110 residues, 1 model selected
+> save chainsTMP/t0_ln.pdb format pdb models #1/t0 selectedOnly true
+> open chainsTMP/t0_ln_Mod.pdb
+Chain information for t0_ln_Mod.pdb #33
+---
+Chain | Description
+t0 | No description available
+> select #1/t1
+atoms, 1663 bonds, 198 residues, 1 model selected
+> save chainsTMP/t1_ln.pdb format pdb models #1/t1 selectedOnly true
+> open chainsTMP/t1_ln_Mod.pdb
+Chain information for t1_ln_Mod.pdb #34
+---
+Chain | Description
+t1 | No description available
+> select #1/t2
+atoms, 2524 bonds, 306 residues, 1 model selected
+> save chainsTMP/t2_ln.pdb format pdb models #1/t2 selectedOnly true
+> open chainsTMP/t2_ln_Mod.pdb
+Chain information for t2_ln_Mod.pdb #35
+---
+Chain | Description
+t2 | No description available
+> select #1/t3
+atoms, 1462 bonds, 179 residues, 1 model selected
+> save chainsTMP/t3_ln.pdb format pdb models #1/t3 selectedOnly true
+> open chainsTMP/t3_ln_Mod.pdb
+Chain information for t3_ln_Mod.pdb #36
+---
+Chain | Description
+t3 | No description available
+> select #1/t4
+atoms, 860 bonds, 96 residues, 1 model selected
+> save chainsTMP/t4_ln.pdb format pdb models #1/t4 selectedOnly true
+> open chainsTMP/t4_ln_Mod.pdb
+Chain information for t4_ln_Mod.pdb #37
+---
+Chain | Description
+t4 | No description available
+> select #1/t5
+atoms, 1730 bonds, 201 residues, 1 model selected
+> save chainsTMP/t5_ln.pdb format pdb models #1/t5 selectedOnly true
+> open chainsTMP/t5_ln_Mod.pdb
+Chain information for t5_ln_Mod.pdb #38
+---
+Chain | Description
+t5 | No description available
+> select #1/t6
+atoms, 4785 bonds, 552 residues, 1 model selected
+> save chainsTMP/t6_ln.pdb format pdb models #1/t6 selectedOnly true
+> open chainsTMP/t6_ln_Mod.pdb
+Chain information for t6_ln_Mod.pdb #39
+---
+Chain | Description
+t6 | No description available
+> select #1/t7
+atoms, 2578 bonds, 285 residues, 1 model selected
+> save chainsTMP/t7_ln.pdb format pdb models #1/t7 selectedOnly true
+> open chainsTMP/t7_ln_Mod.pdb
+Chain information for t7_ln_Mod.pdb #40
+---
+Chain | Description
+t7 | No description available
+> select #1/t8
+atoms, 1193 bonds, 125 residues, 1 model selected
+> save chainsTMP/t8_ln.pdb format pdb models #1/t8 selectedOnly true
+> open chainsTMP/t8_ln_Mod.pdb
+Chain information for t8_ln_Mod.pdb #41
+---
+Chain | Description
+t8 | No description available
+> select #1/t9
+atoms, 1146 bonds, 128 residues, 1 model selected
+> save chainsTMP/t9_ln.pdb format pdb models #1/t9 selectedOnly true
+> open chainsTMP/t9_ln_Mod.pdb
+Chain information for t9_ln_Mod.pdb #42
+---
+Chain | Description
+t9 | No description available
+> select #1/ta
+atoms, 1736 bonds, 210 residues, 1 model selected
+> save chainsTMP/ta_ll.pdb format pdb models #1/ta selectedOnly true
+> open chainsTMP/ta_ll_Mod.pdb
+Chain information for ta_ll_Mod.pdb #43
+---
+Chain | Description
+ta | No description available
+> select #1/tb
+atoms, 2095 bonds, 227 residues, 1 model selected
+> save chainsTMP/tb_ll.pdb format pdb models #1/tb selectedOnly true
+> open chainsTMP/tb_ll_Mod.pdb
+Chain information for tb_ll_Mod.pdb #44
+---
+Chain | Description
+tb | No description available
+> select #1/tc
+atoms, 763 bonds, 94 residues, 1 model selected
+> save chainsTMP/tc_ll.pdb format pdb models #1/tc selectedOnly true
+> open chainsTMP/tc_ll_Mod.pdb
+Chain information for tc_ll_Mod.pdb #45
+---
+Chain | Description
+tc | No description available
+> select #1/td
+atoms, 688 bonds, 79 residues, 1 model selected
+> save chainsTMP/td_ll.pdb format pdb models #1/td selectedOnly true
+> open chainsTMP/td_ll_Mod.pdb
+Chain information for td_ll_Mod.pdb #46
+---
+Chain | Description
+td | No description available
+> select #1/te
+atoms, 1375 bonds, 153 residues, 1 model selected
+> save chainsTMP/te_ll.pdb format pdb models #1/te selectedOnly true
+> open chainsTMP/te_ll_Mod.pdb
+Chain information for te_ll_Mod.pdb #47
+---
+Chain | Description
+te | No description available
+> select #1/tf
+atoms, 900 bonds, 107 residues, 1 model selected
+> save chainsTMP/tf_ll.pdb format pdb models #1/tf selectedOnly true
+> open chainsTMP/tf_ll_Mod.pdb
+Chain information for tf_ll_Mod.pdb #48
+---
+Chain | Description
+tf | No description available
+> select #1/tg
+atoms, 1399 bonds, 164 residues, 1 model selected
+> save chainsTMP/tg_ll.pdb format pdb models #1/tg selectedOnly true
+> open chainsTMP/tg_ll_Mod.pdb
+Chain information for tg_ll_Mod.pdb #49
+---
+Chain | Description
+tg | No description available
+> select #1/R
+atoms, 564 bonds, 62 residues, 1 model selected
+> save chainsTMP/R_u.pdb format pdb models #1/R selectedOnly true
+> open chainsTMP/R_u_Mod.pdb
+Chain information for R_u_Mod.pdb #50
+---
+Chain | Description
+R | No description available
+> select #1/A
+atoms, 2704 bonds, 324 residues, 1 model selected
+> save chainsTMP/A_u.pdb format pdb models #1/A selectedOnly true
+> open chainsTMP/A_u_Mod.pdb
+Chain information for A_u_Mod.pdb #51
+---
+Chain | Description
+A | No description available
+> select #1/A0
+atoms, 3696 bonds, 482 residues, 1 model selected
+> save chainsTMP/A0_un.pdb format pdb models #1/A0 selectedOnly true
+> open chainsTMP/A0_un_Mod.pdb
+Chain information for A0_un_Mod.pdb #52
+---
+Chain | Description
+A0 | No description available
+> select #1/AU
+atoms, 4141 bonds, 2 pseudobonds, 525 residues, 2 models selected
+> save chainsTMP/AU_uu.pdb format pdb models #1/AU selectedOnly true
+> open chainsTMP/AU_uu_Mod.pdb
+Chain information for AU_uu_Mod.pdb #53
+---
+Chain | Description
+AU | No description available
+> select #1/Ab
+atoms, 3693 bonds, 1 pseudobond, 480 residues, 2 models selected
+> save chainsTMP/Ab_ul.pdb format pdb models #1/Ab selectedOnly true
+> open chainsTMP/Ab_ul_Mod.pdb
+Chain information for Ab_ul_Mod.pdb #54
+---
+Chain | Description
+Ab | No description available
+> select #1/Aj
+atoms, 3701 bonds, 483 residues, 1 model selected
+> save chainsTMP/Aj_ul.pdb format pdb models #1/Aj selectedOnly true
+> open chainsTMP/Aj_ul_Mod.pdb
+Chain information for Aj_ul_Mod.pdb #55
+---
+Chain | Description
+Aj | No description available
+> select #1/Aq
+atoms, 1347 bonds, 163 residues, 1 model selected
+> save chainsTMP/Aq_ul.pdb format pdb models #1/Aq selectedOnly true
+> open chainsTMP/Aq_ul_Mod.pdb
+Chain information for Aq_ul_Mod.pdb #56
+---
+Chain | Description
+Aq | No description available
+> select #1/B
+atoms, 1097 bonds, 138 residues, 1 model selected
+> save chainsTMP/B_u.pdb format pdb models #1/B selectedOnly true
+> open chainsTMP/B_u_Mod.pdb
+Chain information for B_u_Mod.pdb #57
+---
+Chain | Description
+B | No description available
+> select #1/BI
+atoms, 1361 bonds, 165 residues, 1 model selected
+> save chainsTMP/BI_uu.pdb format pdb models #1/BI selectedOnly true
+> open chainsTMP/BI_uu_Mod.pdb
+Chain information for BI_uu_Mod.pdb #58
+---
+Chain | Description
+BI | No description available
+> select #1/BK
+atoms, 4077 bonds, 2 pseudobonds, 520 residues, 2 models selected
+> save chainsTMP/BK_uu.pdb format pdb models #1/BK selectedOnly true
+> open chainsTMP/BK_uu_Mod.pdb
+Chain information for BK_uu_Mod.pdb #59
+---
+Chain | Description
+BK | No description available
+> select #1/BP
+atoms, 1365 bonds, 166 residues, 1 model selected
+> save chainsTMP/BP_uu.pdb format pdb models #1/BP selectedOnly true
+> open chainsTMP/BP_uu_Mod.pdb
+Chain information for BP_uu_Mod.pdb #60
+---
+Chain | Description
+BP | No description available
+> select #1/C
+atoms, 1933 bonds, 265 residues, 1 model selected
+> save chainsTMP/C_u.pdb format pdb models #1/C selectedOnly true
+> open chainsTMP/C_u_Mod.pdb
+Chain information for C_u_Mod.pdb #61
+---
+Chain | Description
+C | No description available
+> select #1/C0
+atoms, 547 bonds, 74 residues, 1 model selected
+> save chainsTMP/C0_un.pdb format pdb models #1/C0 selectedOnly true
+> open chainsTMP/C0_un_Mod.pdb
+Chain information for C0_un_Mod.pdb #62
+---
+Chain | Description
+C0 | No description available
+> select #1/C1
+atoms, 547 bonds, 74 residues, 1 model selected
+> save chainsTMP/C1_un.pdb format pdb models #1/C1 selectedOnly true
+> open chainsTMP/C1_un_Mod.pdb
+Chain information for C1_un_Mod.pdb #63
+---
+Chain | Description
+C1 | No description available
+> select #1/C2
+atoms, 547 bonds, 74 residues, 1 model selected
+> save chainsTMP/C2_un.pdb format pdb models #1/C2 selectedOnly true
+> open chainsTMP/C2_un_Mod.pdb
+Chain information for C2_un_Mod.pdb #64
+---
+Chain | Description
+C2 | No description available
+> select #1/C3
+atoms, 547 bonds, 74 residues, 1 model selected
+> save chainsTMP/C3_un.pdb format pdb models #1/C3 selectedOnly true
+> open chainsTMP/C3_un_Mod.pdb
+Chain information for C3_un_Mod.pdb #65
+---
+Chain | Description
+C3 | No description available
+> select #1/C4
+atoms, 539 bonds, 73 residues, 1 model selected
+> save chainsTMP/C4_un.pdb format pdb models #1/C4 selectedOnly true
+> open chainsTMP/C4_un_Mod.pdb
+Chain information for C4_un_Mod.pdb #66
+---
+Chain | Description
+C4 | No description available
+> select #1/C5
+atoms, 547 bonds, 74 residues, 1 model selected
+> save chainsTMP/C5_un.pdb format pdb models #1/C5 selectedOnly true
+> open chainsTMP/C5_un_Mod.pdb
+Chain information for C5_un_Mod.pdb #67
+---
+Chain | Description
+C5 | No description available
+> select #1/C6
+atoms, 547 bonds, 74 residues, 1 model selected
+> save chainsTMP/C6_un.pdb format pdb models #1/C6 selectedOnly true
+> open chainsTMP/C6_un_Mod.pdb
+Chain information for C6_un_Mod.pdb #68
+---
+Chain | Description
+C6 | No description available
+> select #1/C7
+atoms, 547 bonds, 74 residues, 1 model selected
+> save chainsTMP/C7_un.pdb format pdb models #1/C7 selectedOnly true
+> open chainsTMP/C7_un_Mod.pdb
+Chain information for C7_un_Mod.pdb #69
+---
+Chain | Description
+C7 | No description available
+> select #1/C8
+atoms, 547 bonds, 74 residues, 1 model selected
+> save chainsTMP/C8_un.pdb format pdb models #1/C8 selectedOnly true
+> open chainsTMP/C8_un_Mod.pdb
+Chain information for C8_un_Mod.pdb #70
+---
+Chain | Description
+C8 | No description available
+> select #1/C9
+atoms, 547 bonds, 74 residues, 1 model selected
+> save chainsTMP/C9_un.pdb format pdb models #1/C9 selectedOnly true
+> open chainsTMP/C9_un_Mod.pdb
+Chain information for C9_un_Mod.pdb #71
+---
+Chain | Description
+C9 | No description available
+> select #1/D
+atoms, 1727 bonds, 1 pseudobond, 214 residues, 2 models selected
+> save chainsTMP/D_u.pdb format pdb models #1/D selectedOnly true
+> open chainsTMP/D_u_Mod.pdb
+Chain information for D_u_Mod.pdb #72
+---
+Chain | Description
+D | No description available
+> select #1/D6
+atoms, 447 bonds, 1 pseudobond, 54 residues, 2 models selected
+> save chainsTMP/D6_un.pdb format pdb models #1/D6 selectedOnly true
+> open chainsTMP/D6_un_Mod.pdb
+Chain information for D6_un_Mod.pdb #73
+---
+Chain | Description
+D6 | No description available
+> select #1/E
+atoms, 4145 bonds, 2 pseudobonds, 526 residues, 2 models selected
+> save chainsTMP/E_u.pdb format pdb models #1/E selectedOnly true
+> open chainsTMP/E_u_Mod.pdb
+Chain information for E_u_Mod.pdb #74
+---
+Chain | Description
+E | No description available
+> select #1/E1
+atoms, 625 bonds, 1 pseudobond, 80 residues, 2 models selected
+> save chainsTMP/E1_un.pdb format pdb models #1/E1 selectedOnly true
+> open chainsTMP/E1_un_Mod.pdb
+Chain information for E1_un_Mod.pdb #75
+---
+Chain | Description
+E1 | No description available
+> select #1/E4
+atoms, 1429 bonds, 169 residues, 1 model selected
+> save chainsTMP/E4_un.pdb format pdb models #1/E4 selectedOnly true
+> open chainsTMP/E4_un_Mod.pdb
+Chain information for E4_un_Mod.pdb #76
+---
+Chain | Description
+E4 | No description available
+> select #1/Ek
+atoms, 695 bonds, 78 residues, 1 model selected
+> save chainsTMP/Ek_ul.pdb format pdb models #1/Ek selectedOnly true
+> open chainsTMP/Ek_ul_Mod.pdb
+Chain information for Ek_ul_Mod.pdb #77
+---
+Chain | Description
+Ek | No description available
+> select #1/Eq
+atoms, 805 bonds, 84 residues, 1 model selected
+> save chainsTMP/Eq_ul.pdb format pdb models #1/Eq selectedOnly true
+> open chainsTMP/Eq_ul_Mod.pdb
+Chain information for Eq_ul_Mod.pdb #78
+---
+Chain | Description
+Eq | No description available
+> select #1/Es
+atoms, 1156 bonds, 135 residues, 1 model selected
+> save chainsTMP/Es_ul.pdb format pdb models #1/Es selectedOnly true
+> open chainsTMP/Es_ul_Mod.pdb
+Chain information for Es_ul_Mod.pdb #79
+---
+Chain | Description
+Es | No description available
+> select #1/Ev
+atoms, 3290 bonds, 384 residues, 1 model selected
+> save chainsTMP/Ev_ul.pdb format pdb models #1/Ev selectedOnly true
+> open chainsTMP/Ev_ul_Mod.pdb
+Chain information for Ev_ul_Mod.pdb #80
+---
+Chain | Description
+Ev | No description available
+> select #1/F9
+atoms, 621 bonds, 67 residues, 1 model selected
+> save chainsTMP/F9_un.pdb format pdb models #1/F9 selectedOnly true
+> open chainsTMP/F9_un_Mod.pdb
+Chain information for F9_un_Mod.pdb #81
+---
+Chain | Description
+F9 | No description available
+> select #1/FF
+atoms, 618 bonds, 1 pseudobond, 72 residues, 2 models selected
+> save chainsTMP/FF_uu.pdb format pdb models #1/FF selectedOnly true
+> open chainsTMP/FF_uu_Mod.pdb
+Chain information for FF_uu_Mod.pdb #82
+---
+Chain | Description
+FF | No description available
+> select #1/FH
+atoms, 1176 bonds, 140 residues, 1 model selected
+> save chainsTMP/FH_uu.pdb format pdb models #1/FH selectedOnly true
+> open chainsTMP/FH_uu_Mod.pdb
+Chain information for FH_uu_Mod.pdb #83
+---
+Chain | Description
+FH | No description available
+> select #1/FL
+atoms, 2068 bonds, 233 residues, 1 model selected
+> save chainsTMP/FL_uu.pdb format pdb models #1/FL selectedOnly true
+> open chainsTMP/FL_uu_Mod.pdb
+Chain information for FL_uu_Mod.pdb #84
+---
+Chain | Description
+FL | No description available
+> select #1/FO
+atoms, 1201 bonds, 148 residues, 1 model selected
+> save chainsTMP/FO_uu.pdb format pdb models #1/FO selectedOnly true
+> open chainsTMP/FO_uu_Mod.pdb
+Chain information for FO_uu_Mod.pdb #85
+---
+Chain | Description
+FO | No description available
+> select #1/Fy
+atoms, 491 bonds, 58 residues, 1 model selected
+> save chainsTMP/Fy_ul.pdb format pdb models #1/Fy selectedOnly true
+> open chainsTMP/Fy_ul_Mod.pdb
+Chain information for Fy_ul_Mod.pdb #86
+---
+Chain | Description
+Fy | No description available
+> select #1/Fz
+atoms, 412 bonds, 48 residues, 1 model selected
+> save chainsTMP/Fz_ul.pdb format pdb models #1/Fz selectedOnly true
+> open chainsTMP/Fz_ul_Mod.pdb
+Chain information for Fz_ul_Mod.pdb #87
+---
+Chain | Description
+Fz | No description available
+> select #1/IE
+atoms, 1402 bonds, 1 pseudobond, 175 residues, 2 models selected
+> save chainsTMP/IE_uu.pdb format pdb models #1/IE selectedOnly true
+> open chainsTMP/IE_uu_Mod.pdb
+Chain information for IE_uu_Mod.pdb #88
+---
+Chain | Description
+IE | No description available
+> select #1/IY
+atoms, 2377 bonds, 294 residues, 1 model selected
+> save chainsTMP/IY_uu.pdb format pdb models #1/IY selectedOnly true
+> open chainsTMP/IY_uu_Mod.pdb
+Chain information for IY_uu_Mod.pdb #89
+---
+Chain | Description
+IY | No description available
+> select #1/JC
+atoms, 1276 bonds, 162 residues, 1 model selected
+> save chainsTMP/JC_uu.pdb format pdb models #1/JC selectedOnly true
+> open chainsTMP/JC_uu_Mod.pdb
+Chain information for JC_uu_Mod.pdb #90
+---
+Chain | Description
+JC | No description available
+> select #1/a
+atoms, 822 bonds, 94 residues, 1 model selected
+> save chainsTMP/a_l.pdb format pdb models #1/a selectedOnly true
+> open chainsTMP/a_l_Mod.pdb
+Chain information for a_l_Mod.pdb #91
+---
+Chain | Description
+a | No description available
+> select #1/HM
+atoms, 126 bonds, 8 pseudobonds, 3 residues, 2 models selected
+> save chainsTMP/HM_uu.pdb format pdb models #1/HM selectedOnly true
+> open chainsTMP/HM_uu_Mod.pdb
+> select #1/FS
+atoms, 25 bonds, 3 residues, 1 model selected
+> save chainsTMP/FS_uu.pdb format pdb models #1/FS selectedOnly true
+> open chainsTMP/FS_uu_Mod.pdb
+> select #1/FD
+atoms, 58 bonds, 1 residue, 1 model selected
+> save chainsTMP/FD_uu.pdb format pdb models #1/FD selectedOnly true
+> open chainsTMP/FD_uu_Mod.pdb
+> select #1/HN
+atoms, 126 bonds, 8 pseudobonds, 2 residues, 2 models selected
+> save chainsTMP/HN_uu.pdb format pdb models #1/HN selectedOnly true
+> open chainsTMP/HN_uu_Mod.pdb
+> select #1/HO
+atoms, 46 bonds, 4 pseudobonds, 1 residue, 2 models selected
+> save chainsTMP/HO_uu.pdb format pdb models #1/HO selectedOnly true
+> open chainsTMP/HO_uu_Mod.pdb
+> select #1/GT
+atoms, 739 bonds, 88 residues, 1 model selected
+> save chainsTMP/GT_uu.pdb format pdb models #1/GT selectedOnly true
+> open chainsTMP/GT_uu_Mod.pdb
+Chain information for GT_uu_Mod.pdb #97
+---
+Chain | Description
+GT | No description available
+> combine #2-97 close true modelId #2 name fixedModel
+Computing secondary structure
+[Repeated 95 time(s)]
+> save "/Users/rafaelrocha/Library/CloudStorage/GoogleDrive-
+> rafael.eduardo.oliveira.rocha@gmail.com/Other computers/My
+> Computer/supercomplex/supercomplexV-
+> IV2-II/cryosparc_P43_J450_008_volume_map_sharp_NOSEQ/superComplexConsolidation/superComplexConsolidatedV1.cif"
+> models #2
+Not saving entity_poly_seq for non-authoritative sequences
+> close session
+> open "/Users/rafaelrocha/Library/CloudStorage/GoogleDrive-
+> rafael.eduardo.oliveira.rocha@gmail.com/Other computers/My
+> Computer/supercomplex/supercomplexV-
+> IV2-II/cryosparc_P43_J450_008_volume_map_sharp_NOSEQ/superComplexConsolidation/superComplexConsolidatedV1.cif"
+Summary of feedback from opening
+/Users/rafaelrocha/Library/CloudStorage/GoogleDrive-
+rafael.eduardo.oliveira.rocha@gmail.com/Other computers/My
+Computer/supercomplex/supercomplexV-
+IV2-II/cryosparc_P43_J450_008_volume_map_sharp_NOSEQ/superComplexConsolidation/superComplexConsolidatedV1.cif
+---
+warnings | Unknown polymer entity '1' on line 333
+Unknown polymer entity '2' on line 1763
+Unknown polymer entity '3' on line 2594
+Unknown polymer entity '4' on line 4478
+Unknown polymer entity '5' on line 5142
+messages similar to the above omitted
+Atom OMA is not in the residue template for HEM /HM:1
+Atom C13 is not in the residue template for HE9 /HM:1
+Missing or incomplete sequence information. Inferred polymer connectivity.
+Chain information for superComplexConsolidatedV1.cif #1
+---
+Chain | Description
+A | No description available
+A0 | No description available
+AG t3 | No description available
+AU | No description available
+Ab | No description available
+Aj | No description available
+Aq | No description available
+Ar t4 | No description available
+B | No description available
+BI | No description available
+BK | No description available
+BP | No description available
+C | No description available
+C0 C1 C2 C3 C5 C6 C7 C8 C9 | No description available
+C4 | No description available
+D | No description available
+D6 | No description available
+E | No description available
+E1 | No description available
+E4 | No description available
+Ek | No description available
+Eq | No description available
+Es | No description available
+Ev | No description available
+F9 | No description available
+FF | No description available
+FH | No description available
+FL | No description available
+FO | No description available
+Fy | No description available
+Fz | No description available
+GT | No description available
+I0 tb | No description available
+IE | No description available
+IY | No description available
+Il td | No description available
+Ix t9 | No description available
+Iy tc | No description available
+J6 t1 | No description available
+JC | No description available
+JI | No description available
+JJ t6 | No description available
+JN tf | No description available
+Jw t8 | No description available
+Jx | No description available
+K5 | No description available
+KI t5 | No description available
+Ke | No description available
+Kp | No description available
+Ks te | No description available
+L3 | No description available
+LG | No description available
+LO t2 | No description available
+LR | No description available
+LY tg | No description available
+M | No description available
+Mg | No description available
+Mq | No description available
+Mr t0 | No description available
+NF | No description available
+NM | No description available
+Np t7 | No description available
+R | No description available
+TB | No description available
+Y ta | No description available
+a | No description available
+> open "/Users/rafaelrocha/Library/CloudStorage/GoogleDrive-
+> rafael.eduardo.oliveira.rocha@gmail.com/Other computers/My
+> Computer/supercomplex/supercomplexV-
+> IV2-II/cryosparc_P43_J450_008_volume_map_sharp.mrc"
+Opened cryosparc_P43_J450_008_volume_map_sharp.mrc as #2, grid size
+,500,500, pixel 1.21, shown at level 0.118, step 2, values float32
+> clipper associate #2 toModel #1
+Opened cryosparc_P43_J450_008_volume_map_sharp.mrc as #1.1.1.1, grid size
+,500,500, pixel 1.21, shown at level 0.201, step 1, values float32
+Chain information for superComplexConsolidatedV1.cif
+---
+Chain | Description
+.2/A | No description available
+.2/A0 | No description available
+.2/AG 1.2/t3 | No description available
+.2/AU | No description available
+.2/Ab | No description available
+.2/Aj | No description available
+.2/Aq | No description available
+.2/Ar 1.2/t4 | No description available
+.2/B | No description available
+.2/BI | No description available
+.2/BK | No description available
+.2/BP | No description available
+.2/C | No description available
+.2/C0 1.2/C1 1.2/C2 1.2/C3 1.2/C5 1.2/C6 1.2/C7 1.2/C8 1.2/C9 | No description available
+.2/C4 | No description available
+.2/D | No description available
+.2/D6 | No description available
+.2/E | No description available
+.2/E1 | No description available
+.2/E4 | No description available
+.2/Ek | No description available
+.2/Eq | No description available
+.2/Es | No description available
+.2/Ev | No description available
+.2/F9 | No description available
+.2/FF | No description available
+.2/FH | No description available
+.2/FL | No description available
+.2/FO | No description available
+.2/Fy | No description available
+.2/Fz | No description available
+.2/GT | No description available
+.2/I0 1.2/tb | No description available
+.2/IE | No description available
+.2/IY | No description available
+.2/Il 1.2/td | No description available
+.2/Ix 1.2/t9 | No description available
+.2/Iy 1.2/tc | No description available
+.2/J6 1.2/t1 | No description available
+.2/JC | No description available
+.2/JI | No description available
+.2/JJ 1.2/t6 | No description available
+.2/JN 1.2/tf | No description available
+.2/Jw 1.2/t8 | No description available
+.2/Jx | No description available
+.2/K5 | No description available
+.2/KI 1.2/t5 | No description available
+.2/Ke | No description available
+.2/Kp | No description available
+.2/Ks 1.2/te | No description available
+.2/L3 | No description available
+.2/LG | No description available
+.2/LO 1.2/t2 | No description available
+.2/LR | No description available
+.2/LY 1.2/tg | No description available
+.2/M | No description available
+.2/Mg | No description available
+.2/Mq | No description available
+.2/Mr 1.2/t0 | No description available
+.2/NF | No description available
+.2/NM | No description available
+.2/Np 1.2/t7 | No description available
+.2/R | No description available
+.2/TB | No description available
+.2/Y 1.2/ta | No description available
+.2/a | No description available
+> volume #1.1.1.1 style surface
+> transparency 50
+> addh #1 hbond false
+Summary of feedback from adding hydrogens to superComplexConsolidatedV1.cif
+#1.2
+---
+warning | Not adding hydrogens to /GT ALA 93 CA because it is missing heavy-atom bond partners
+notes | No usable SEQRES records for superComplexConsolidatedV1.cif (#1.2) chain A; guessing termini instead
+No usable SEQRES records for superComplexConsolidatedV1.cif (#1.2) chain A0;
+guessing termini instead
+No usable SEQRES records for superComplexConsolidatedV1.cif (#1.2) chain AG;
+guessing termini instead
+No usable SEQRES records for superComplexConsolidatedV1.cif (#1.2) chain AU;
+guessing termini instead
+No usable SEQRES records for superComplexConsolidatedV1.cif (#1.2) chain Ab;
+guessing termini instead
+messages similar to the above omitted
+Chain-initial residues that are actual N termini: /A ALA 34, /A0 PRO 204, /AG
+PHE 18, /AU LYS 35, /Ab GLU 206, /Aj LYS 208, /Aq LYS 25, /Ar LEU 23, /B ALA
+, /BI ALA 23, /BK THR 37, /BP GLY 22, /C SER 85, /C0 ILE 33, /C1 ILE 33, /C2
+ILE 33, /C3 ILE 33, /C4 SER 34, /C5 ILE 33, /C6 ILE 33, /C7 ILE 33, /C8 ILE
+, /C9 ILE 33, /D TYR 18, /D6 VAL 7, /E PHE 33, /E1 LEU 51, /E4 GLN 35, /Ek
+ASN 26, /Eq ASN 62, /Es VAL 2, /Ev GLY 3, /F9 HIS 37, /FF HIS 98, /FH VAL 18,
+/FL MET 1, /FO PHE 12, /Fy PRO 60, /Fz VAL 58, /GT ALA 6, /I0 SER 160, /IE LYS
+, /IY SER 2, /Il TYR 26, /Ix ASP 152, /Iy THR 22, /J6 THR 2, /JC GLU 22, /JI
+PRO 11, /JJ MET 1, /JN ALA 2, /Jw VAL 21, /Jx LYS 11, /K5 ALA 14, /KI THR 26,
+/Ke ALA 44, /Kp PRO 53, /Ks GLU 4, /L3 VAL 52, /LG TRP 20, /LO TYR 37, /LR SER
+, /LY PRO 182, /M PRO 2, /Mg ILE 36, /Mq SER 34, /Mr THR 38, /NF LYS 30, /NM
+TYR 82, /Np MET 1, /R MET 1, /TB MET 18, /Y MET 1, /a TYR 3, /t0 THR 38, /t1
+THR 2, /t2 TYR 37, /t3 PHE 18, /t4 LEU 23, /t5 THR 26, /t6 MET 1, /t7 MET 1,
+/t8 VAL 21, /t9 ASP 152, /ta MET 1, /tb SER 160, /tc THR 22, /td TYR 26, /te
+GLU 4, /tf ALA 2, /tg PRO 182
+Chain-initial residues that are not actual N termini: /AU GLN 151, /AU GLN
+, /Ab THR 521, /BK GLN 151, /BK VAL 437, /D ILE 234, /D6 VAL 63, /E GLN
+, /E GLN 438, /E1 ASP 217, /FF MET 124, /IE VAL 199, /JI GLU 259, /K5 LYS
+, /K5 ARG 299, /K5 LYS 338, /K5 ILE 361, /K5 GLU 490, /K5 MET 567, /L3 TYR
+, /L3 VAL 198, /L3 VAL 312, /NF ARG 189
+Chain-final residues that are actual C termini: /A PRO 357, /A0 LYS 685, /AU
+VAL 574, /Ab ARG 690, /Aj HIS 690, /Aq GLN 187, /B LYS 160, /BI GLN 187, /BK
+VAL 574, /BP GLN 187, /C MET 349, /C0 SER 106, /C1 SER 106, /C2 SER 106, /C3
+SER 106, /C4 SER 106, /C5 SER 106, /C6 SER 106, /C7 SER 106, /C8 SER 106, /C9
+SER 106, /D VAL 258, /D6 THR 70, /E GLY 575, /E1 GLY 239, /E4 GLY 203, /Ek SER
+, /Eq TYR 145, /Es HIS 136, /Ev ALA 386, /F9 GLN 103, /FF PRO 174, /FH VAL
+, /FL GLY 233, /FO ALA 159, /Fy ALA 117, /Fz VAL 105, /IE GLY 204, /IY ASN
+, /JC GLU 183, /R HIS 62, /a GLN 96
+Chain-final residues that are not actual C termini: /AG SER 196, /AU LEU 139,
+/AU ASP 430, /Ab VAL 515, /Ar TRP 118, /BK GLY 138, /BK ASP 430, /D LYS 206,
+/D6 LEU 52, /E LEU 139, /E ALA 429, /E1 GLU 123, /FF TYR 118, /GT ALA 93, /I0
+LYS 383, /IE VAL 194, /Il GLU 104, /Ix ILE 279, /Iy GLN 115, /J6 PHE 199, /JI
+LYS 491, /JI PHE 252, /JJ ILE 549, /JN VAL 108, /Jw PHE 144, /Jx ASP 124, /K5
+PRO 602, /K5 ILE 138, /K5 GLU 268, /K5 LEU 311, /K5 VAL 354, /K5 ALA 484, /K5
+ARG 546, /KI GLU 225, /Ke LEU 138, /Kp GLU 224, /Ks ALA 156, /L3 ARG 325, /L3
+LEU 84, /L3 GLY 117, /L3 HIS 283, /LG SER 123, /LO LYS 342, /LR GLY 148, /LY
+ALA 345, /M PHE 103, /Mg ALA 250, /Mq LYS 90, /Mr LEU 147, /NF SER 246, /NF
+LEU 183, /NM MET 144, /Np VAL 283, /TB THR 81, /Y ILE 210, /t0 LEU 147, /t1
+PHE 199, /t2 LYS 342, /t3 SER 196, /t4 TRP 118, /t5 GLU 225, /t6 ILE 549, /t7
+VAL 283, /t8 PHE 144, /t9 ILE 279, /ta ILE 210, /tb LYS 383, /tc GLN 115, /td
+GLU 104, /te ALA 156, /tf VAL 108, /tg ALA 345
+Adding 'H' to /AU GLN 151
+Adding 'H' to /AU GLN 436
+Adding 'H' to /Ab THR 521
+Adding 'H' to /BK GLN 151
+Adding 'H' to /BK VAL 437
+messages similar to the above omitted
+/AG SER 196 is not terminus, removing H atom from 'C'
+/Ar TRP 118 is not terminus, removing H atom from 'C'
+/GT ALA 93 is not terminus, removing H atom from 'C'
+/I0 LYS 383 is not terminus, removing H atom from 'C'
+/Il GLU 104 is not terminus, removing H atom from 'C'
+messages similar to the above omitted
+hydrogens added
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+> select clear
+Chain HM, residue 1 specifies more than one residue! The simulation can still
+run, but this will probably cause problems later if not rectified by
+renumbering.
+Deleted the following atoms from residue FAD FD1: H7M3, H6A2, H6A1, H1', H5',
+H7M1, H1'', H8M1, H8M3, H3, HO2B, H5'', H1, H5B2, HO3B, H7M2, H5B1, H8M2
+Deleted the following atoms from residue F3S FS3: S1, S4, FE3
+> close session
+> open "/Users/rafaelrocha/Library/CloudStorage/GoogleDrive-
+> rafael.eduardo.oliveira.rocha@gmail.com/Other computers/My
+> Computer/supercomplex/supercomplexV-
+> IV2-II/cryosparc_P43_J450_008_volume_map_sharp_NOSEQ/superComplexConsolidation/superComplexConsolidatedV1.cif"
+Summary of feedback from opening
+/Users/rafaelrocha/Library/CloudStorage/GoogleDrive-
+rafael.eduardo.oliveira.rocha@gmail.com/Other computers/My
+Computer/supercomplex/supercomplexV-
+IV2-II/cryosparc_P43_J450_008_volume_map_sharp_NOSEQ/superComplexConsolidation/superComplexConsolidatedV1.cif
+---
+warnings | Unknown polymer entity '1' on line 333
+Unknown polymer entity '2' on line 1763
+Unknown polymer entity '3' on line 2594
+Unknown polymer entity '4' on line 4478
+Unknown polymer entity '5' on line 5142
+messages similar to the above omitted
+Atom OMA is not in the residue template for HEM /HM:1
+Atom C13 is not in the residue template for HE9 /HM:1
+Missing or incomplete sequence information. Inferred polymer connectivity.
+Chain information for superComplexConsolidatedV1.cif #1
+---
+Chain | Description
+A | No description available
+A0 | No description available
+AG t3 | No description available
+AU | No description available
+Ab | No description available
+Aj | No description available
+Aq | No description available
+Ar t4 | No description available
+B | No description available
+BI | No description available
+BK | No description available
+BP | No description available
+C | No description available
+C0 C1 C2 C3 C5 C6 C7 C8 C9 | No description available
+C4 | No description available
+D | No description available
+D6 | No description available
+E | No description available
+E1 | No description available
+E4 | No description available
+Ek | No description available
+Eq | No description available
+Es | No description available
+Ev | No description available
+F9 | No description available
+FF | No description available
+FH | No description available
+FL | No description available
+FO | No description available
+Fy | No description available
+Fz | No description available
+GT | No description available
+I0 tb | No description available
+IE | No description available
+IY | No description available
+Il td | No description available
+Ix t9 | No description available
+Iy tc | No description available
+J6 t1 | No description available
+JC | No description available
+JI | No description available
+JJ t6 | No description available
+JN tf | No description available
+Jw t8 | No description available
+Jx | No description available
+K5 | No description available
+KI t5 | No description available
+Ke | No description available
+Kp | No description available
+Ks te | No description available
+L3 | No description available
+LG | No description available
+LO t2 | No description available
+LR | No description available
+LY tg | No description available
+M | No description available
+Mg | No description available
+Mq | No description available
+Mr t0 | No description available
+NF | No description available
+NM | No description available
+Np t7 | No description available
+R | No description available
+TB | No description available
+Y ta | No description available
+a | No description available
+> open "/Users/rafaelrocha/Library/CloudStorage/GoogleDrive-
+> rafael.eduardo.oliveira.rocha@gmail.com/Other computers/My
+> Computer/supercomplex/supercomplexV-
+> IV2-II/cryosparc_P43_J450_008_volume_map_sharp.mrc"
+Opened cryosparc_P43_J450_008_volume_map_sharp.mrc as #2, grid size
+,500,500, pixel 1.21, shown at level 0.118, step 2, values float32
+> addh #1 hbond false
+Summary of feedback from adding hydrogens to superComplexConsolidatedV1.cif #1
+---
+warning | Not adding hydrogens to /GT ALA 93 CA because it is missing heavy-atom bond partners
+notes | No usable SEQRES records for superComplexConsolidatedV1.cif (#1) chain A; guessing termini instead
+No usable SEQRES records for superComplexConsolidatedV1.cif (#1) chain A0;
+guessing termini instead
+No usable SEQRES records for superComplexConsolidatedV1.cif (#1) chain AG;
+guessing termini instead
+No usable SEQRES records for superComplexConsolidatedV1.cif (#1) chain AU;
+guessing termini instead
+No usable SEQRES records for superComplexConsolidatedV1.cif (#1) chain Ab;
+guessing termini instead
+messages similar to the above omitted
+Chain-initial residues that are actual N termini: /A ALA 34, /A0 PRO 204, /AG
+PHE 18, /AU LYS 35, /Ab GLU 206, /Aj LYS 208, /Aq LYS 25, /Ar LEU 23, /B ALA
+, /BI ALA 23, /BK THR 37, /BP GLY 22, /C SER 85, /C0 ILE 33, /C1 ILE 33, /C2
+ILE 33, /C3 ILE 33, /C4 SER 34, /C5 ILE 33, /C6 ILE 33, /C7 ILE 33, /C8 ILE
+, /C9 ILE 33, /D TYR 18, /D6 VAL 7, /E PHE 33, /E1 LEU 51, /E4 GLN 35, /Ek
+ASN 26, /Eq ASN 62, /Es VAL 2, /Ev GLY 3, /F9 HIS 37, /FF HIS 98, /FH VAL 18,
+/FL MET 1, /FO PHE 12, /Fy PRO 60, /Fz VAL 58, /GT ALA 6, /I0 SER 160, /IE LYS
+, /IY SER 2, /Il TYR 26, /Ix ASP 152, /Iy THR 22, /J6 THR 2, /JC GLU 22, /JI
+PRO 11, /JJ MET 1, /JN ALA 2, /Jw VAL 21, /Jx LYS 11, /K5 ALA 14, /KI THR 26,
+/Ke ALA 44, /Kp PRO 53, /Ks GLU 4, /L3 VAL 52, /LG TRP 20, /LO TYR 37, /LR SER
+, /LY PRO 182, /M PRO 2, /Mg ILE 36, /Mq SER 34, /Mr THR 38, /NF LYS 30, /NM
+TYR 82, /Np MET 1, /R MET 1, /TB MET 18, /Y MET 1, /a TYR 3, /t0 THR 38, /t1
+THR 2, /t2 TYR 37, /t3 PHE 18, /t4 LEU 23, /t5 THR 26, /t6 MET 1, /t7 MET 1,
+/t8 VAL 21, /t9 ASP 152, /ta MET 1, /tb SER 160, /tc THR 22, /td TYR 26, /te
+GLU 4, /tf ALA 2, /tg PRO 182
+Chain-initial residues that are not actual N termini: /AU GLN 151, /AU GLN
+, /Ab THR 521, /BK GLN 151, /BK VAL 437, /D ILE 234, /D6 VAL 63, /E GLN
+, /E GLN 438, /E1 ASP 217, /FF MET 124, /IE VAL 199, /JI GLU 259, /K5 LYS
+, /K5 ARG 299, /K5 LYS 338, /K5 ILE 361, /K5 GLU 490, /K5 MET 567, /L3 TYR
+, /L3 VAL 198, /L3 VAL 312, /NF ARG 189
+Chain-final residues that are actual C termini: /A PRO 357, /A0 LYS 685, /AU
+VAL 574, /Ab ARG 690, /Aj HIS 690, /Aq GLN 187, /B LYS 160, /BI GLN 187, /BK
+VAL 574, /BP GLN 187, /C MET 349, /C0 SER 106, /C1 SER 106, /C2 SER 106, /C3
+SER 106, /C4 SER 106, /C5 SER 106, /C6 SER 106, /C7 SER 106, /C8 SER 106, /C9
+SER 106, /D VAL 258, /D6 THR 70, /E GLY 575, /E1 GLY 239, /E4 GLY 203, /Ek SER
+, /Eq TYR 145, /Es HIS 136, /Ev ALA 386, /F9 GLN 103, /FF PRO 174, /FH VAL
+, /FL GLY 233, /FO ALA 159, /Fy ALA 117, /Fz VAL 105, /IE GLY 204, /IY ASN
+, /JC GLU 183, /R HIS 62, /a GLN 96
+Chain-final residues that are not actual C termini: /AG SER 196, /AU LEU 139,
+/AU ASP 430, /Ab VAL 515, /Ar TRP 118, /BK GLY 138, /BK ASP 430, /D LYS 206,
+/D6 LEU 52, /E LEU 139, /E ALA 429, /E1 GLU 123, /FF TYR 118, /GT ALA 93, /I0
+LYS 383, /IE VAL 194, /Il GLU 104, /Ix ILE 279, /Iy GLN 115, /J6 PHE 199, /JI
+LYS 491, /JI PHE 252, /JJ ILE 549, /JN VAL 108, /Jw PHE 144, /Jx ASP 124, /K5
+PRO 602, /K5 ILE 138, /K5 GLU 268, /K5 LEU 311, /K5 VAL 354, /K5 ALA 484, /K5
+ARG 546, /KI GLU 225, /Ke LEU 138, /Kp GLU 224, /Ks ALA 156, /L3 ARG 325, /L3
+LEU 84, /L3 GLY 117, /L3 HIS 283, /LG SER 123, /LO LYS 342, /LR GLY 148, /LY
+ALA 345, /M PHE 103, /Mg ALA 250, /Mq LYS 90, /Mr LEU 147, /NF SER 246, /NF
+LEU 183, /NM MET 144, /Np VAL 283, /TB THR 81, /Y ILE 210, /t0 LEU 147, /t1
+PHE 199, /t2 LYS 342, /t3 SER 196, /t4 TRP 118, /t5 GLU 225, /t6 ILE 549, /t7
+VAL 283, /t8 PHE 144, /t9 ILE 279, /ta ILE 210, /tb LYS 383, /tc GLN 115, /td
+GLU 104, /te ALA 156, /tf VAL 108, /tg ALA 345
+Adding 'H' to /AU GLN 151
+Adding 'H' to /AU GLN 436
+Adding 'H' to /Ab THR 521
+Adding 'H' to /BK GLN 151
+Adding 'H' to /BK VAL 437
+messages similar to the above omitted
+/AG SER 196 is not terminus, removing H atom from 'C'
+/Ar TRP 118 is not terminus, removing H atom from 'C'
+/GT ALA 93 is not terminus, removing H atom from 'C'
+/I0 LYS 383 is not terminus, removing H atom from 'C'
+/Il GLU 104 is not terminus, removing H atom from 'C'
+messages similar to the above omitted
+hydrogens added
+> clipper associate #2 toModel #1
+Opened cryosparc_P43_J450_008_volume_map_sharp.mrc as #1.1.1.1, grid size
+,500,500, pixel 1.21, shown at level 0.201, step 1, values float32
+Chain information for superComplexConsolidatedV1.cif
+---
+Chain | Description
+.2/A | No description available
+.2/A0 | No description available
+.2/AG 1.2/t3 | No description available
+.2/AU | No description available
+.2/Ab | No description available
+.2/Aj | No description available
+.2/Aq | No description available
+.2/Ar 1.2/t4 | No description available
+.2/B | No description available
+.2/BI | No description available
+.2/BK | No description available
+.2/BP | No description available
+.2/C | No description available
+.2/C0 1.2/C1 1.2/C2 1.2/C3 1.2/C5 1.2/C6 1.2/C7 1.2/C8 1.2/C9 | No description available
+.2/C4 | No description available
+.2/D | No description available
+.2/D6 | No description available
+.2/E | No description available
+.2/E1 | No description available
+.2/E4 | No description available
+.2/Ek | No description available
+.2/Eq | No description available
+.2/Es | No description available
+.2/Ev | No description available
+.2/F9 | No description available
+.2/FF | No description available
+.2/FH | No description available
+.2/FL | No description available
+.2/FO | No description available
+.2/Fy | No description available
+.2/Fz | No description available
+.2/GT | No description available
+.2/I0 1.2/tb | No description available
+.2/IE | No description available
+.2/IY | No description available
+.2/Il 1.2/td | No description available
+.2/Ix 1.2/t9 | No description available
+.2/Iy 1.2/tc | No description available
+.2/J6 1.2/t1 | No description available
+.2/JC | No description available
+.2/JI | No description available
+.2/JJ 1.2/t6 | No description available
+.2/JN 1.2/tf | No description available
+.2/Jw 1.2/t8 | No description available
+.2/Jx | No description available
+.2/K5 | No description available
+.2/KI 1.2/t5 | No description available
+.2/Ke | No description available
+.2/Kp | No description available
+.2/Ks 1.2/te | No description available
+.2/L3 | No description available
+.2/LG | No description available
+.2/LO 1.2/t2 | No description available
+.2/LR | No description available
+.2/LY 1.2/tg | No description available
+.2/M | No description available
+.2/Mg | No description available
+.2/Mq | No description available
+.2/Mr 1.2/t0 | No description available
+.2/NF | No description available
+.2/NM | No description available
+.2/Np 1.2/t7 | No description available
+.2/R | No description available
+.2/TB | No description available
+.2/Y 1.2/ta | No description available
+.2/a | No description available
+> volume #1.1.1.1 style surface
+> transparency 50
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+> select clear
+Chain HM, residue 1 specifies more than one residue! The simulation can still
+run, but this will probably cause problems later if not rectified by
+renumbering.
+Deleted the following atoms from residue FAD FD1: H1'', H8M2, H6A2, H8M1,
+H7M2, H3, H5B1, HO2B, H5', HO3B, H5'', H1, H7M3, H1', H7M1, H6A1, H5B2, H8M3
+> isolde ignore #1/FS
+ISOLDE: currently ignoring 3 residues in model 1.2
+> isolde ignore #1/HM
+ISOLDE: currently ignoring 6 residues in model 1.2
+> isolde ignore #1/HN
+ISOLDE: currently ignoring 8 residues in model 1.2
+> isolde ignore #1/HO
+ISOLDE: currently ignoring 9 residues in model 1.2
+Fetching CCD CYS_LEO2_DHG from http://ligand-
+expo.rcsb.org/reports/C/CYS_LEO2_DHG/CYS_LEO2_DHG.cif
+Fetching CCD CSO from
+https://files.wwpdb.org/pub/pdb/refdata/chem_comp/O/CSO/CSO.cif
+Fetching CCD CSS from
+https://files.wwpdb.org/pub/pdb/refdata/chem_comp/S/CSS/CSS.cif
+Chain HM, residue 1 specifies more than one residue! The simulation can still
+run, but this will probably cause problems later if not rectified by
+renumbering.
+> save "/Users/rafaelrocha/Library/CloudStorage/GoogleDrive-
+> rafael.eduardo.oliveira.rocha@gmail.com/Other computers/My
+> Computer/supercomplex/supercomplexV-
+> IV2-II/cryosparc_P43_J450_008_volume_map_sharp_NOSEQ/superComplexConsolidation/superComplexConsolidatedV1.cif"
+Not saving entity_poly_seq for non-authoritative sequences
+Cannot save '/Users/rafaelrocha/Library/CloudStorage/GoogleDrive-
+rafael.eduardo.oliveira.rocha@gmail.com/Other computers/My
+Computer/supercomplex/supercomplexV-
+IV2-II/cryosparc_P43_J450_008_volume_map_sharp_NOSEQ/superComplexConsolidation/superComplexConsolidatedV1.cif':
+[Errno 60] Operation timed out
+> save "/Users/rafaelrocha/Library/CloudStorage/GoogleDrive-
+> rafael.eduardo.oliveira.rocha@gmail.com/Other computers/My
+> Computer/supercomplex/supercomplexV-
+> IV2-II/cryosparc_P43_J450_008_volume_map_sharp_NOSEQ/superComplexConsolidation/superComplexConsolidatedV2.cxs"
+> save "/Users/rafaelrocha/Library/CloudStorage/GoogleDrive-
+> rafael.eduardo.oliveira.rocha@gmail.com/Other computers/My
+> Computer/supercomplex/supercomplexV-
+> IV2-II/cryosparc_P43_J450_008_volume_map_sharp_NOSEQ/superComplexConsolidation/superComplexConsolidatedV2.cif"
+Not saving entity_poly_seq for non-authoritative sequences
+> select
+> ~#3/Ks,te,Iy,tc,Ix,t9,Kp,Il,td,JJ,t6,Mr,t0,K5,I0,tb,JI,Lr,Y,ta,NF,Mx,J6,t1,CS,NM,LY,tg,JN,tf,L3,M,J4,LR,Jx,Jw,t8,Ar,t4,Mw,Lb,AG,t3,KI,t5,Ii,Ke,Mh,LO,t2,Mq,TB,Ml,Mg,LG,MC,Np,t7,I2&#3
+Nothing selected
+> select
+> ~#1/Ks,te,Iy,tc,Ix,t9,Kp,Il,td,JJ,t6,Mr,t0,K5,I0,tb,JI,Lr,Y,ta,NF,Mx,J6,t1,CS,NM,LY,tg,JN,tf,L3,M,J4,LR,Jx,Jw,t8,Ar,t4,Mw,Lb,AG,t3,KI,t5,Ii,Ke,Mh,LO,t2,Mq,TB,Ml,Mg,LG,MC,Np,t7,I2&#1
+atoms, 125318 bonds, 32 pseudobonds, 7825 residues, 18 models selected
+> select
+> #1/Ks,te,Iy,tc,Ix,t9,Kp,Il,td,JJ,t6,Mr,t0,K5,I0,tb,JI,Lr,Y,ta,NF,Mx,J6,t1,CS,NM,LY,tg,JN,tf,L3,M,J4,LR,Jx,Jw,t8,Ar,t4,Mw,Lb,AG,t3,KI,t5,Ii,Ke,Mh,LO,t2,Mq,TB,Ml,Mg,LG,MC,Np,t7,I2
+atoms, 147751 bonds, 11 pseudobonds, 8830 residues, 2 models selected
+> select #1
+atoms, 273069 bonds, 43 pseudobonds, 16655 residues, 19 models selected
+> select
+> ~#1/Ks,te,Iy,tc,Ix,t9,Kp,Il,td,JJ,t6,Mr,t0,K5,I0,tb,JI,Lr,Y,ta,NF,Mx,J6,t1,CS,NM,LY,tg,JN,tf,L3,M,J4,LR,Jx,Jw,t8,Ar,t4,Mw,Lb,AG,t3,KI,t5,Ii,Ke,Mh,LO,t2,Mq,TB,Ml,Mg,LG,MC,Np,t7,I2&#1
+atoms, 125318 bonds, 32 pseudobonds, 7825 residues, 19 models selected
+> select up
+atoms, 273069 bonds, 43 pseudobonds, 16655 residues, 18 models selected
+> select down
+atoms, 125318 bonds, 32 pseudobonds, 7825 residues, 19 models selected
+> select
+> #1/Ks,te,Iy,tc,Ix,t9,Kp,Il,td,JJ,t6,Mr,t0,K5,I0,tb,JI,Lr,Y,ta,NF,Mx,J6,t1,CS,NM,LY,tg,JN,tf,L3,M,J4,LR,Jx,Jw,t8,Ar,t4,Mw,Lb,AG,t3,KI,t5,Ii,Ke,Mh,LO,t2,Mq,TB,Ml,Mg,LG,MC,Np,t7,I2
+atoms, 147751 bonds, 11 pseudobonds, 8830 residues, 2 models selected
+> open "/Users/rafaelrocha/Library/CloudStorage/GoogleDrive-
+> rafael.eduardo.oliveira.rocha@gmail.com/Other computers/My
+> Computer/supercomplex/supercomplexV-
+> IV2-II/cryosparc_P43_J450_008_volume_map_sharp.mrc"
+Opened cryosparc_P43_J450_008_volume_map_sharp.mrc as #2, grid size
+,500,500, pixel 1.21, shown at level 0.118, step 2, values float32
+> hide #!2 models
+> select
+> ~#1/Ks,te,Iy,tc,Ix,t9,Kp,Il,td,JJ,t6,Mr,t0,K5,I0,tb,JI,Lr,Y,ta,NF,Mx,J6,t1,CS,NM,LY,tg,JN,tf,L3,M,J4,LR,Jx,Jw,t8,Ar,t4,Mw,Lb,AG,t3,KI,t5,Ii,Ke,Mh,LO,t2,Mq,TB,Ml,Mg,LG,MC,Np,t7,I2&#1
+atoms, 125318 bonds, 32 pseudobonds, 7825 residues, 20 models selected
+> save "/Users/rafaelrocha/Library/CloudStorage/GoogleDrive-
+> rafael.eduardo.oliveira.rocha@gmail.com/Other computers/My
+> Computer/supercomplex/supercomplexV-
+> IV2-II/cryosparc_P43_J450_008_volume_map_sharp_NOSEQ/superComplexConsolidation/superComplexConsolidatedV2.cxs"
+> isolde sim start /R,A-A0,AU-Aq,B-F9,FF-FO,Fy-Fz,IE-IY,JC,a,GT-HM,FS,FD,HN-HO
+ISOLDE: started sim
+> show #!2 models
+> show sel cartoons
+> hide sel atoms
+> hide #!2 models
+> select clear
+> select up
+atoms, 75 bonds, 4 residues, 1 model selected
+> select up
+atoms, 2273 bonds, 140 residues, 1 model selected
+> show sel atoms
+> hide sel cartoons
+> show sel cartoons
+> hide sel atoms
+> select up
+atoms, 58 bonds, 4 residues, 1 model selected
+> select up
+atoms, 5377 bonds, 324 residues, 1 model selected
+> show sel atoms
+> hide sel atoms
+> select up
+atoms, 100 bonds, 6 residues, 1 model selected
+> select up
+atoms, 2389 bonds, 148 residues, 1 model selected
+> show sel atoms
+> hide sel atoms
+> select
+> ~#1/Ks,te,Iy,tc,Ix,t9,Kp,Il,td,JJ,t6,Mr,t0,K5,I0,tb,JI,Lr,Y,ta,NF,Mx,J6,t1,CS,NM,LY,tg,JN,tf,L3,M,J4,LR,Jx,Jw,t8,Ar,t4,Mw,Lb,AG,t3,KI,t5,Ii,Ke,Mh,LO,t2,Mq,TB,Ml,Mg,LG,MC,Np,t7,I2&#1
+atoms, 125318 bonds, 32 pseudobonds, 7825 residues, 23 models selected
+> show #!2 models
+> hide #!2 models
+> select clear
+> select up
+atoms, 54 bonds, 3 residues, 1 model selected
+> select up
+atoms, 1442 bonds, 88 residues, 1 model selected
+> show sel atoms
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 359 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde sim start /GT
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 3 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> show #!2 models
+> transparency 0
+> transparency 50
+> open "/Users/rafaelrocha/Library/CloudStorage/GoogleDrive-
+> rafael.eduardo.oliveira.rocha@gmail.com/Other computers/My
+> Computer/supercomplex/supercomplexV-
+> IV2-II/cryosparc_P43_J450_008_volume_map_sharp_NOSEQ/cryosparc_P43_J450_008_volume_map_sharp_NOSEQ.cif"
+Summary of feedback from opening
+/Users/rafaelrocha/Library/CloudStorage/GoogleDrive-
+rafael.eduardo.oliveira.rocha@gmail.com/Other computers/My
+Computer/supercomplex/supercomplexV-
+IV2-II/cryosparc_P43_J450_008_volume_map_sharp_NOSEQ/cryosparc_P43_J450_008_volume_map_sharp_NOSEQ.cif
+---
+warnings | Missing entity information. Treating each chain as a separate entity.
+Missing or incomplete sequence information. Inferred polymer connectivity.
+Chain information for cryosparc_P43_J450_008_volume_map_sharp_NOSEQ.cif #3
+---
+Chain | Description
+CY | No description available
+| No description available
+| No description available
+| No description available
+Au | No description available
+A | No description available
+A3 DB | No description available
+A4 | No description available
+A6 | No description available
+A8 | No description available
+A9 | No description available
+AA | No description available
+AB | No description available
+AD | No description available
+AE | No description available
+AF | No description available
+AG AJ EH | No description available
+AH | No description available
+AK | No description available
+AL | No description available
+AN Fo | No description available
+AO | No description available
+AP | No description available
+AQ | No description available
+AR BH DP EC | No description available
+AS CS | No description available
+AV | No description available
+AZ Bz CJ CP CZ Cr t | No description available
+Aa | No description available
+Ab | No description available
+Ad | No description available
+Ae | No description available
+Am M | No description available
+An | No description available
+Ao | No description available
+Aq | No description available
+Ar | No description available
+As BB Bn | No description available
+Ax | No description available
+Ay BK | No description available
+Az | No description available
+B1 | No description available
+B2 | No description available
+B3 | No description available
+B5 | No description available
+B9 | No description available
+BC EV | No description available
+BJ | No description available
+BL | No description available
+BO | No description available
+BP | No description available
+BQ | No description available
+BW | No description available
+BY C u | No description available
+Bb o | No description available
+Bd | No description available
+Bf | No description available
+Bg Ce | No description available
+Bp | No description available
+Bq | No description available
+Bt | No description available
+Bv | No description available
+Bw | No description available
+By w | No description available
+C2 | No description available
+C3 | No description available
+C4 | No description available
+C7 | No description available
+CA | No description available
+CE Ca | No description available
+CG | No description available
+CQ p | No description available
+CR | No description available
+Cg EY | No description available
+Cv | No description available
+Cz | No description available
+D | No description available
+D3 | No description available
+DI | No description available
+DZ | No description available
+Di | No description available
+Dr | No description available
+E | No description available
+E0 | No description available
+E1 | No description available
+E2 | No description available
+E3 | No description available
+E4 | No description available
+E5 | No description available
+E6 | No description available
+E7 | No description available
+E8 | No description available
+E9 | No description available
+EJ | No description available
+EK | No description available
+Ec | No description available
+Ef | No description available
+Eg | No description available
+Eh | No description available
+Ei | No description available
+Ej | No description available
+Ek | No description available
+El | No description available
+Em | No description available
+En | No description available
+Eo | No description available
+Ep | No description available
+Eq | No description available
+Er | No description available
+Es | No description available
+Et | No description available
+Eu | No description available
+Ev | No description available
+Ew | No description available
+Ex | No description available
+Ey | No description available
+Ez | No description available
+F0 | No description available
+F1 | No description available
+F2 Fq | No description available
+F3 | No description available
+F4 | No description available
+F5 | No description available
+F6 | No description available
+F7 | No description available
+F8 | No description available
+F9 | No description available
+FA | No description available
+FB | No description available
+FC | No description available
+FD | No description available
+FE | No description available
+FF | No description available
+FG | No description available
+FH | No description available
+FI | No description available
+FJ | No description available
+FK | No description available
+FL | No description available
+FM | No description available
+FN | No description available
+FO | No description available
+FP | No description available
+FQ | No description available
+FR | No description available
+FS | No description available
+FT | No description available
+FU | No description available
+FV | No description available
+FW | No description available
+FX | No description available
+FY | No description available
+FZ | No description available
+Fa | No description available
+Fb | No description available
+Fc | No description available
+Fd | No description available
+Fe | No description available
+Ff GH | No description available
+Fg | No description available
+Fh | No description available
+Fi | No description available
+Fj | No description available
+Fk | No description available
+Fl | No description available
+Fm | No description available
+Fn | No description available
+Fp | No description available
+Fr | No description available
+Fs | No description available
+Ft | No description available
+Fu | No description available
+Fv | No description available
+Fw | No description available
+Fx | No description available
+Fy | No description available
+Fz | No description available
+G X | No description available
+GA | No description available
+GB | No description available
+GC | No description available
+GD | No description available
+GE | No description available
+GF | No description available
+GG | No description available
+GI | No description available
+GJ | No description available
+GK | No description available
+GL | No description available
+GM | No description available
+GN | No description available
+GO | No description available
+GP | No description available
+GQ | No description available
+GR | No description available
+GS | No description available
+GT | No description available
+J | No description available
+L | No description available
+N | No description available
+O | No description available
+P | No description available
+Q | No description available
+R | No description available
+S | No description available
+T | No description available
+U | No description available
+V | No description available
+W | No description available
+Y | No description available
+Z | No description available
+a | No description available
+c | No description available
+d | No description available
+e | No description available
+g | No description available
+h | No description available
+i | No description available
+j | No description available
+l | No description available
+m | No description available
+n | No description available
+q | No description available
+r | No description available
+v | No description available
+x | No description available
+y | No description available
+> select #3
+atoms, 27073 bonds, 3296 residues, 1 model selected
+> hide sel atoms
+> show sel cartoons
+Computing secondary structure
+> color #3@C* lawngreen
+> hide #!2 models
+> select clear
+> select up
+atoms, 20 bonds, 1 residue, 2 models selected
+> select up
+atoms, 283 bonds, 17 residues, 2 models selected
+> select up
+atoms, 889 bonds, 57 residues, 2 models selected
+> isolde sim start #1.2/E1:51-123
+ISOLDE: started sim
+> show sel cartoons
+> hide sel atoms
+> ui mousemode right "isolde tug selection"
+> select up
+atoms, 419 bonds, 28 residues, 1 model selected
+> select clear
+> show sel atoms
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 3 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde sim start #1.2/FO:12-31
+ISOLDE: started sim
+> ui mousemode right "isolde tug selection"
+> show sel cartoons
+> ui mousemode right "isolde tug atom"
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 2 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde sim start #1.2/FO:69-106
+ISOLDE: started sim
+> show sel cartoons
+> ui mousemode right "isolde tug selection"
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 2 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> select clear
+> isolde sim start #1.2/Ek:73-79
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 1 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> select clear
+> select #3
+atoms, 27073 bonds, 3296 residues, 1 model selected
+> select clear
+> select up
+atoms, 18 bonds, 1 residue, 1 model selected
+> select up
+atoms, 312 bonds, 20 residues, 2 models selected
+> select up
+atoms, 1326 bonds, 78 residues, 2 models selected
+> select up
+atoms, 273069 bonds, 16655 residues, 2 models selected
+> hide sel atoms
+> select up
+atoms, 68 bonds, 4 residues, 1 model selected
+> select up
+atoms, 1326 bonds, 78 residues, 1 model selected
+> isolde sim start #1.2/Ek
+ISOLDE: started sim
+> select #3
+atoms, 27073 bonds, 3296 residues, 1 model selected
+> show sel cartoons
+[Repeated 4 time(s)]
+> isolde sim stop discardTo start
+Sim termination reason: None
+reverting to start
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> select up
+atoms, 68 bonds, 4 residues, 1 model selected
+> isolde sim start #1.2/Ek:41-44
+ISOLDE: started sim
+> show sel atoms
+> show sel cartoons
+> hide sel cartoons
+> select up
+atoms, 528 bonds, 30 residues, 2 models selected
+> select up
+atoms, 1326 bonds, 78 residues, 2 models selected
+> select up
+atoms, 273069 bonds, 16655 residues, 2 models selected
+> isolde sim stop discardTo start
+Sim termination reason: None
+reverting to start
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> select #1/Ek
+atoms, 1326 bonds, 78 residues, 1 model selected
+> isolde sim start #1.2/Ek
+ISOLDE: started sim
+> show sel cartoons
+> select clear
+> select up
+atoms, 68 bonds, 4 residues, 1 model selected
+> ui mousemode right "isolde tug selection"
+> select ~sel & ##selected
+atoms, 273058 bonds, 43 pseudobonds, 16654 residues, 3 models selected
+> select #1/Ek
+atoms, 1326 bonds, 78 residues, 1 model selected
+> show sel atoms
+> select clear
+> ui mousemode right "isolde tug atom"
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 14 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> select up
+atoms, 101 bonds, 7 residues, 1 model selected
+> isolde sim start #1.2/Ev:26-32
+ISOLDE: started sim
+> show sel cartoons
+> show sel atoms
+Tugging of non-polar hydrogens is not enabled. Applying tug to the nearest
+bonded heavy atom.
+[Repeated 1 time(s)]
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> select #1/Ek
+atoms, 1326 bonds, 78 residues, 1 model selected
+> isolde sim start #1.2/Ek
+ISOLDE: started sim
+> show sel cartoons
+> show sel atoms
+> ui mousemode right "isolde tug selection"
+> select clear
+> ui mousemode right "isolde tug atom"
+Tugging of non-polar hydrogens is not enabled. Applying tug to the nearest
+bonded heavy atom.
+[Repeated 1 time(s)]
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 6 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> select #1/Ek
+atoms, 1326 bonds, 78 residues, 1 model selected
+> volume #1.1.1.1 level 0.4677
+> select up
+atoms, 293 bonds, 17 residues, 1 model selected
+> select #1/R
+atoms, 1074 bonds, 62 residues, 1 model selected
+> isolde sim start #1.2/R
+ISOLDE: started sim
+> show sel cartoons
+> show sel atoms
+> ui mousemode right "isolde tug selection"
+> ui mousemode right "isolde tug atom"
+> select #1
+atoms, 273069 bonds, 43 pseudobonds, 16655 residues, 23 models selected
+> show sel cartoons
+> select up
+atoms, 49 bonds, 3 residues, 1 model selected
+> select up
+atoms, 2273 bonds, 140 residues, 1 model selected
+> select down
+atoms, 49 bonds, 3 residues, 1 model selected
+> ui mousemode right "isolde tug selection"
+> select clear
+> ui mousemode right "isolde tug residue"
+> isolde sim stop discardTo start
+Sim termination reason: None
+reverting to start
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> select up
+atoms, 76 bonds, 4 residues, 1 model selected
+> select up
+atoms, 2273 bonds, 140 residues, 1 model selected
+> isolde sim start #1.2/FH
+ISOLDE: started sim
+> show sel cartoons
+> show sel atoms
+> hide sel atoms
+> ui mousemode right "isolde tug selection"
+> show sel atoms
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 4 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> select #1/Ek
+atoms, 1326 bonds, 78 residues, 1 model selected
+> isolde sim start #1.2/R:1-5
+ISOLDE: started sim
+> show sel cartoons
+> show sel atoms
+> ui mousemode right "isolde tug selection"
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 1 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> select #1/Ek
+atoms, 1326 bonds, 78 residues, 1 model selected
+> isolde sim start #1.2/Ek
+ISOLDE: started sim
+> isolde sim stop discardTo start
+Sim termination reason: None
+reverting to start
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> select #1/R
+atoms, 1074 bonds, 62 residues, 1 model selected
+> isolde sim start #1.2/R
+ISOLDE: started sim
+> show sel atoms
+> show sel cartoons
+Tugging of non-polar hydrogens is not enabled. Applying tug to the nearest
+bonded heavy atom.
+[Repeated 1 time(s)]
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 6 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> select #1/R
+atoms, 1074 bonds, 62 residues, 1 model selected
+> isolde sim start #1.2/R
+ISOLDE: started sim
+> show sel atoms
+> show sel cartoons
+Tugging of non-polar hydrogens is not enabled. Applying tug to the nearest
+bonded heavy atom.
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 5 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> save "/Users/rafaelrocha/Library/CloudStorage/GoogleDrive-
+> rafael.eduardo.oliveira.rocha@gmail.com/Other computers/My
+> Computer/supercomplex/supercomplexV-
+> IV2-II/cryosparc_P43_J450_008_volume_map_sharp_NOSEQ/superComplexConsolidation/superComplexConsolidatedV3.cxs"
+> select #1/Es
+atoms, 2250 bonds, 135 residues, 1 model selected
+> isolde sim start #1.2/Es
+ISOLDE: started sim
+> show sel cartoons
+> show sel atoms
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 11 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> select clear
+> select up
+atoms, 181 bonds, 10 residues, 1 model selected
+> select up
+atoms, 6346 bonds, 384 residues, 1 model selected
+> select down
+atoms, 181 bonds, 10 residues, 1 model selected
+> select up
+atoms, 6346 bonds, 384 residues, 1 model selected
+> isolde sim start #1.2/Ev
+ISOLDE: started sim
+> show sel cartoons
+> show sel atoms
+Tugging of non-polar hydrogens is not enabled. Applying tug to the nearest
+bonded heavy atom.
+[Repeated 2 time(s)]
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 8 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> select #1/Es
+atoms, 2250 bonds, 135 residues, 1 model selected
+> isolde sim start #1.2/Es
+ISOLDE: started sim
+> show sel cartoons
+> show sel atoms
+> select clear
+> select #1/Es
+atoms, 2250 bonds, 135 residues, 1 model selected
+Tugging of non-polar hydrogens is not enabled. Applying tug to the nearest
+bonded heavy atom.
+[Repeated 6 time(s)]
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 19 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> select #1/Fy
+atoms, 957 bonds, 58 residues, 1 model selected
+> isolde sim start #1.2/Fy
+ISOLDE: started sim
+> show sel cartoons
+> show sel atoms
+Tugging of non-polar hydrogens is not enabled. Applying tug to the nearest
+bonded heavy atom.
+[Repeated 2 time(s)]
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 3 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> select #1/FO
+atoms, 2389 bonds, 148 residues, 1 model selected
+> isolde sim start #1.2/FO
+ISOLDE: started sim
+> show sel cartoons
+> show sel atoms
+Tugging of non-polar hydrogens is not enabled. Applying tug to the nearest
+bonded heavy atom.
+[Repeated 1 time(s)]
+> hide sel atoms
+> ui mousemode right "isolde tug residue"
+> show sel atoms
+> ui mousemode right "isolde tug atom"
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 18 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> select #1/GT
+atoms, 1442 bonds, 88 residues, 1 model selected
+> isolde sim start #1.2/GT
+ISOLDE: started sim
+> show sel atoms
+> show sel cartoons
+Tugging of non-polar hydrogens is not enabled. Applying tug to the nearest
+bonded heavy atom.
+> isolde cisflip #1.2/GT:72
+[Repeated 3 time(s)]
+Tugging of non-polar hydrogens is not enabled. Applying tug to the nearest
+bonded heavy atom.
+[Repeated 2 time(s)]
+> select #1/GT
+atoms, 1442 bonds, 88 residues, 1 model selected
+> select clear
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 11 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> select up
+atoms, 95 bonds, 6 residues, 1 model selected
+> select up
+atoms, 1442 bonds, 88 residues, 1 model selected
+> isolde sim start #1.2/GT
+ISOLDE: started sim
+> show sel cartoons
+> show sel atoms
+Tugging of non-polar hydrogens is not enabled. Applying tug to the nearest
+bonded heavy atom.
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 1 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> select #1/GT
+atoms, 1442 bonds, 88 residues, 1 model selected
+> select #1/E4
+atoms, 2822 bonds, 169 residues, 1 model selected
+> isolde sim start #1.2/E4
+ISOLDE: started sim
+> show sel cartoons
+> show sel atoms
+Tugging of non-polar hydrogens is not enabled. Applying tug to the nearest
+bonded heavy atom.
+[Repeated 1 time(s)]
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 9 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> select clear
+> select #1/FH
+atoms, 2273 bonds, 140 residues, 1 model selected
+> isolde sim start #1.2/FH
+ISOLDE: started sim
+> show sel cartoons
+> show sel atoms
+Tugging of non-polar hydrogens is not enabled. Applying tug to the nearest
+bonded heavy atom.
+[Repeated 3 time(s)]
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 6 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> select clear
+> select #1/GT,Ek,R,Es,Fy,FO,GT,E4,FH
+atoms, 14533 bonds, 878 residues, 1 model selected
+> color sel&@C* magenta
+> select clear
+> hide #3 models
+> show #3 models
+> color #1/GT,Ek,R,Es,Fy,FO,GT,E4,FH,Ev@C* magenta
+> select #1/A
+atoms, 5377 bonds, 324 residues, 1 model selected
+> color #1/GT,Ek,R,Es,Fy,FO,GT,E4,FH,Ev,A@C* magenta
+> select #1/F9
+atoms, 1200 bonds, 67 residues, 1 model selected
+> color #1/GT,Ek,R,Es,Fy,FO,GT,E4,FH,Ev,A,F9@C* magenta
+> select clear
+> select #1/Eq
+atoms, 1534 bonds, 84 residues, 1 model selected
+> isolde sim start #1.2/Eq
+ISOLDE: started sim
+> show sel cartoons
+> show sel atoms
+> isolde sim stop discardTo start
+Sim termination reason: None
+reverting to start
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde sim start #1.2/Eq
+ISOLDE: started sim
+> show sel cartoons
+> show sel atoms
+Tugging of non-polar hydrogens is not enabled. Applying tug to the nearest
+bonded heavy atom.
+> show sel cartoons
+Tugging of non-polar hydrogens is not enabled. Applying tug to the nearest
+bonded heavy atom.
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 15 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> color #1/GT,Ek,R,Es,Fy,FO,GT,E4,FH,Ev,A,F9,Eq@C* magenta
+> select #1/E1
+atoms, 1254 bonds, 1 pseudobond, 80 residues, 2 models selected
+> isolde sim start #1.2/E1
+ISOLDE: started sim
+> show sel cartoons
+> show sel atoms
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 1 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> hide #3 models
+> color #1/GT,Ek,R,Es,Fy,FO,GT,E4,FH,Ev,A,F9,Eq,E1@C* magenta
+> select #1/a
+atoms, 1606 bonds, 94 residues, 1 model selected
+> show #3 models
+> isolde sim start #1.2/a
+ISOLDE: started sim
+> show sel cartoons
+> show sel atoms
+Tugging of non-polar hydrogens is not enabled. Applying tug to the nearest
+bonded heavy atom.
+> isolde cisflip #1.2/a:62
+[Repeated 1 time(s)]
+> isolde cisflip #1.2/a:63
+Tugging of non-polar hydrogens is not enabled. Applying tug to the nearest
+bonded heavy atom.
+[Repeated 1 time(s)]
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 7 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> select #1/a
+atoms, 1606 bonds, 94 residues, 1 model selected
+> color #1/GT,Ek,R,Es,Fy,FO,GT,E4,FH,Ev,A,F9,Eq,E1,a@C* magenta
+> select clear
+> color #1/GT,Ek,R,Es,Fy,FO,GT,E4,FH,Ev,A,F9,Eq,E1,a@C* magenta
+> select #1/a
+atoms, 1606 bonds, 94 residues, 1 model selected
+> hide #3 models
+> select clear
+> show #3 models
+> select #1/Fz
+atoms, 808 bonds, 48 residues, 1 model selected
+> isolde sim start #1.2/Fz
+ISOLDE: started sim
+> show sel atoms
+> show sel cartoons
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 2 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> color #1/GT,Ek,R,Es,Fy,FO,GT,E4,FH,Ev,A,F9,Eq,E1,a,Fz@C* magenta
+> hide #3 models
+> select clear
+> select #1/FL
+atoms, 4077 bonds, 233 residues, 1 model selected
+> isolde sim start #1.2/FL
+ISOLDE: started sim
+> show sel cartoons
+> show sel atoms
+> show #3 models
+Tugging of non-polar hydrogens is not enabled. Applying tug to the nearest
+bonded heavy atom.
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 13 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> select clear
+> color #1/GT,Ek,R,Es,Fy,FO,GT,E4,FH,Ev,A,F9,Eq,E1,a,Fz,FL@C* magenta
+> select #1/FL
+atoms, 4077 bonds, 233 residues, 1 model selected
+> hide #3 models
+> select clear
+> volume #1.1.1.1 level 0.2554
+> show #!2 models
+> show #3 models
+> hide #3 models
+> hide #!2 models
+> show #3 models
+> select up
+atoms, 345 bonds, 21 residues, 1 model selected
+> select up
+atoms, 365 bonds, 23 residues, 1 model selected
+> select down
+atoms, 345 bonds, 21 residues, 1 model selected
+> select down
+atoms, 1 residue, 1 model selected
+> select up
+atoms, 345 bonds, 21 residues, 1 model selected
+> isolde sim start #1.2/E1:218-238
+ISOLDE: started sim
+> show sel cartoons
+> show sel atoms
+Tugging of non-polar hydrogens is not enabled. Applying tug to the nearest
+bonded heavy atom.
+[Repeated 1 time(s)]
+> select #1
+atoms, 273069 bonds, 43 pseudobonds, 16655 residues, 23 models selected
+> show sel cartoons
+> hide sel cartoons
+> select #1/FL
+atoms, 4077 bonds, 233 residues, 1 model selected
+> show sel atoms
+> hide sel atoms
+> select #1/E1
+atoms, 1254 bonds, 1 pseudobond, 80 residues, 2 models selected
+> show sel cartoons
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 2 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde sim start #1.2/E1
+ISOLDE: started sim
+> show sel cartoons
+> show sel atoms
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 2 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> select #1
+atoms, 273069 bonds, 43 pseudobonds, 16655 residues, 23 models selected
+> show sel atoms
+> select up
+atoms, 23 bonds, 1 residue, 1 model selected
+> isolde sim start #1.2/E1:238
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> select #1/Fy
+atoms, 957 bonds, 58 residues, 1 model selected
+> isolde sim start #1.2/Fy
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> hide #3 models
+> select clear
+> select #1/FF
+atoms, 1211 bonds, 1 pseudobond, 72 residues, 2 models selected
+> isolde sim start #1.2/FF
+ISOLDE: started sim
+> show sel cartoons
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 3 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> color #1/GT,Ek,R,Es,Fy,FO,GT,E4,FH,Ev,A,F9,Eq,E1,a,Fz,FL,FF@C* magenta
+> select clear
+> show #!2 models
+> ui tool show "Ramachandran Plot"
+> select #1/GT,Ek,R,Es,Fy,FO,GT,E4,FH,Ev,A,F9,Eq,E1,a,Fz,FL,FF
+atoms, 37946 bonds, 2 pseudobonds, 2264 residues, 2 models selected
+> isolde sim start #1.2/IY:198
+ISOLDE: started sim
+> hide #!2 models
+> isolde pepflip #1.2/IY:198
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 1 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde sim start #1.2/A:88
+ISOLDE: started sim
+> isolde pepflip #1.2/A:88
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde sim start #1.2/R:57
+ISOLDE: started sim
+> isolde pepflip #1.2/R:57
+[Repeated 1 time(s)]
+> isolde pepflip #1.2/R:58
+> isolde pepflip #1.2/R:56
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde sim start #1.2/B:96
+ISOLDE: started sim
+> isolde pepflip #1.2/B:96
+> isolde pepflip #1.2/B:97
+[Repeated 3 time(s)]
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde sim start #1.2/B:54
+ISOLDE: started sim
+> isolde pepflip #1.2/B:54
+> isolde pepflip #1.2/B:53
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde sim start #1.2/C7:69
+ISOLDE: started sim
+> isolde pepflip #1.2/C7:69
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde sim start #1.2/Eq:71
+ISOLDE: started sim
+> isolde pepflip #1.2/Eq:72
+> isolde pepflip #1.2/Eq:73
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 1 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde sim start #1.2/Ek:72
+ISOLDE: started sim
+> isolde pepflip #1.2/Ek:72
+> isolde cisflip #1.2/Ek:71
+[Repeated 1 time(s)]
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde sim start #1.2/Ek:74
+ISOLDE: started sim
+> isolde pepflip #1.2/Ek:74
+[Repeated 2 time(s)]
+> isolde pepflip #1.2/Ek:75
+> isolde pepflip #1.2/Ek:74
+[Repeated 3 time(s)]
+> isolde pepflip #1.2/Ek:73
+> isolde pepflip #1.2/Ek:74
+[Repeated 1 time(s)]
+> isolde pepflip #1.2/Ek:73
+> isolde pepflip #1.2/Ek:74
+> isolde pepflip #1.2/Ek:75
+[Repeated 1 time(s)]
+> select clear
+> isolde pepflip #1.2/Ek:74
+> isolde pepflip #1.2/Ek:75
+[Repeated 4 time(s)]
+> isolde pepflip #1.2/Ek:74
+[Repeated 1 time(s)]
+> isolde pepflip #1.2/Ek:73
+[Repeated 1 time(s)]
+> isolde pepflip #1.2/Ek:74
+[Repeated 1 time(s)]
+> isolde pepflip #1.2/Ek:75
+[Repeated 1 time(s)]
+> isolde pepflip #1.2/Ek:76
+[Repeated 3 time(s)]
+> select up
+atoms, 6 bonds, 1 residue, 2 models selected
+> select up
+atoms, 312 bonds, 20 residues, 2 models selected
+> select up
+atoms, 1326 bonds, 78 residues, 2 models selected
+> isolde pepflip #1.2/Ek:75
+> isolde pepflip #1.2/Ek:76
+> isolde pepflip #1.2/Ek:74
+> isolde pepflip #1.2/Ek:75
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> show #3 models
+> hide #3 models
+> isolde sim start #1.2/D:131
+ISOLDE: started sim
+> isolde pepflip #1.2/D:131
+> isolde pepflip #1.2/D:130
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 1 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde sim start #1.2/F9:100
+ISOLDE: started sim
+> isolde pepflip #1.2/F9:101
+[Repeated 1 time(s)]
+> isolde pepflip #1.2/F9:102
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 2 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde sim start #1.2/FO:113
+ISOLDE: started sim
+> isolde pepflip #1.2/FO:113
+> isolde pepflip #1.2/FO:111
+[Repeated 1 time(s)]
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 1 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde sim start #1.2/E1:233
+ISOLDE: started sim
+> isolde pepflip #1.2/E1:233
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 1 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde sim start #1.2/C:310
+ISOLDE: started sim
+> isolde pepflip #1.2/C:310
+> isolde pepflip #1.2/C:311
+[Repeated 1 time(s)]
+> isolde pepflip #1.2/C:310
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 1 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde sim start #1.2/A:285
+ISOLDE: started sim
+> isolde pepflip #1.2/A:288
+> isolde pepflip #1.2/A:289
+[Repeated 1 time(s)]
+> isolde cisflip #1.2/A:288
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 1 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde sim start #1.2/IE:172
+ISOLDE: started sim
+> isolde pepflip #1.2/IE:172
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde sim start #1.2/BK:133
+ISOLDE: started sim
+> isolde pepflip #1.2/BK:133
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 1 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde sim start #1.2/Ek:27
+ISOLDE: started sim
+> isolde pepflip #1.2/Ek:27
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 1 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde sim start #1.2/Eq:136
+ISOLDE: started sim
+> isolde pepflip #1.2/Eq:136
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde sim start #1.2/E4:191
+ISOLDE: started sim
+> isolde pepflip #1.2/E4:191
+> isolde pepflip #1.2/E4:190
+[Repeated 2 time(s)]
+> isolde pepflip #1.2/E4:188
+[Repeated 1 time(s)]
+> isolde pepflip #1.2/E4:187
+[Repeated 3 time(s)]
+> isolde pepflip #1.2/E4:188
+[Repeated 1 time(s)]
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde sim start #1.2/Ab:484
+ISOLDE: started sim
+> isolde pepflip #1.2/Ab:484
+> isolde pepflip #1.2/Ab:483
+> isolde pepflip #1.2/Ab:482
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 1 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde sim start #1.2/Aq:64
+ISOLDE: started sim
+> isolde pepflip #1.2/Aq:64
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde sim start #1.2/E4:37
+ISOLDE: started sim
+> isolde pepflip #1.2/E4:37
+[Repeated 1 time(s)]
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde sim start #1.2/AU:198
+ISOLDE: started sim
+> isolde pepflip #1.2/AU:198
+[Repeated 2 time(s)]
+> isolde pepflip #1.2/AU:199
+> isolde pepflip #1.2/AU:200
+[Repeated 1 time(s)]
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde sim start #1.2/FL:8
+ISOLDE: started sim
+> isolde pepflip #1.2/FL:8
+> isolde pepflip #1.2/FL:9
+> isolde pepflip #1.2/FL:8
+Tugging of non-polar hydrogens is not enabled. Applying tug to the nearest
+bonded heavy atom.
+> isolde pepflip #1.2/FL:9
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde sim start #1.2/Fz:86
+ISOLDE: started sim
+> isolde pepflip #1.2/Fz:87
+> isolde pepflip #1.2/Fz:88
+[Repeated 3 time(s)]
+> isolde pepflip #1.2/Fz:87
+> isolde pepflip #1.2/Fz:86
+[Repeated 1 time(s)]
+> select clear
+> isolde pepflip #1.2/Fz:82
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 2 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde sim start #1.2/A0:592
+ISOLDE: started sim
+> select clear
+> isolde pepflip #1.2/A0:592
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde sim start #1.2/D:240
+ISOLDE: started sim
+> isolde pepflip #1.2/D:240
+> isolde pepflip #1.2/D:239
+[Repeated 1 time(s)]
+> isolde pepflip #1.2/D:240
+[Repeated 1 time(s)]
+> isolde pepflip #1.2/D:239
+> isolde pepflip #1.2/D:238
+[Repeated 2 time(s)]
+> isolde pepflip #1.2/D:240
+> isolde pepflip #1.2/D:241
+> select clear
+> isolde pepflip #1.2/D:239
+[Repeated 3 time(s)]
+> isolde pepflip #1.2/D:238
+> isolde pepflip #1.2/D:239
+> isolde pepflip #1.2/D:238
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 3 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> save "/Users/rafaelrocha/Library/CloudStorage/GoogleDrive-
+> rafael.eduardo.oliveira.rocha@gmail.com/Other computers/My
+> Computer/supercomplex/supercomplexV-
+> IV2-II/cryosparc_P43_J450_008_volume_map_sharp_NOSEQ/superComplexConsolidation/superComplexConsolidatedV4.cxs"
+Taking snapshot of stepper: superComplexConsolidatedV1.cif
+> isolde sim start #1.2/D:55
+ISOLDE: started sim
+> select clear
+> isolde pepflip #1.2/D:55
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde sim start #1.2/C:339
+ISOLDE: started sim
+> isolde pepflip #1.2/C:339
+[Repeated 1 time(s)]
+> isolde pepflip #1.2/C:338
+> isolde pepflip #1.2/C:339
+[Repeated 1 time(s)]
+> isolde pepflip #1.2/C:340
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde sim start #1.2/Fz:80
+ISOLDE: started sim
+> isolde pepflip #1.2/Fz:80
+[Repeated 3 time(s)]
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde sim start #1.2/AU:235
+ISOLDE: started sim
+> isolde pepflip #1.2/AU:235
+[Repeated 2 time(s)]
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> cd "/Users/rafaelrocha/Library/CloudStorage/GoogleDrive-
+> rafael.eduardo.oliveira.rocha@gmail.com/Other computers/My
+> Computer/supercomplex/supercomplexV-
+> IV2-II/cryosparc_P43_J450_008_volume_map_sharp_NOSEQ/superComplexConsolidation"
+Current working directory is:
+/Users/rafaelrocha/Library/CloudStorage/GoogleDrive-
+rafael.eduardo.oliveira.rocha@gmail.com/Other computers/My
+Computer/supercomplex/supercomplexV-
+IV2-II/cryosparc_P43_J450_008_volume_map_sharp_NOSEQ/superComplexConsolidation
+> save "/Users/rafaelrocha/Library/CloudStorage/GoogleDrive-
+> rafael.eduardo.oliveira.rocha@gmail.com/Other computers/My
+> Computer/supercomplex/supercomplexV-
+> IV2-II/cryosparc_P43_J450_008_volume_map_sharp_NOSEQ/superComplexConsolidation/superComplexConsolidatedV4.cxs"
+Taking snapshot of stepper: superComplexConsolidatedV1.cif
+> runscript /Users/rafaelrocha/Library/CloudStorage/OneDrive-
+> Personal/GitHub/KRSPs/isoldeScripts/runOptimization.py
+Traceback (most recent call last):
+File "/Users/rafaelrocha/Library/CloudStorage/OneDrive-
+Personal/GitHub/KRSPs/isoldeScripts/runOptimization.py", line 12, in <module>
+rootPath = sys.argv[1]
+~~~~~~~~^^^
+IndexError: list index out of range
+Error opening python file /Users/rafaelrocha/Library/CloudStorage/OneDrive-
+Personal/GitHub/KRSPs/isoldeScripts/runOptimization.py
+> runscript /Users/rafaelrocha/Library/CloudStorage/OneDrive-
+> Personal/GitHub/KRSPs/isoldeScripts/runOptimization.py ./
+Traceback (most recent call last):
+File "/Users/rafaelrocha/Library/CloudStorage/OneDrive-
+Personal/GitHub/KRSPs/isoldeScripts/runOptimization.py", line 17, in <module>
+from RAMOptimization import *
+ModuleNotFoundError: No module named 'RAMOptimization'
+Error opening python file /Users/rafaelrocha/Library/CloudStorage/OneDrive-
+Personal/GitHub/KRSPs/isoldeScripts/runOptimization.py
+> runscript /Users/rafaelrocha/Library/CloudStorage/OneDrive-
+> Personal/GitHub/KRSPs/isoldeScripts/runOptimization.py ./
+Traceback (most recent call last):
+File "/Users/rafaelrocha/Library/CloudStorage/OneDrive-
+Personal/GitHub/KRSPs/isoldeScripts/runOptimization.py", line 17, in <module>
+from RAMOptimization import *
+ModuleNotFoundError: No module named 'RAMOptimization'
+Error opening python file /Users/rafaelrocha/Library/CloudStorage/OneDrive-
+Personal/GitHub/KRSPs/isoldeScripts/runOptimization.py
+> runscript /Users/rafaelrocha/Library/CloudStorage/OneDrive-
+> Personal/GitHub/KRSPs/isoldeScripts/runOptimization.py ./
+Traceback (most recent call last):
+File "/Users/rafaelrocha/Library/CloudStorage/OneDrive-
+Personal/GitHub/KRSPs/isoldeScripts/runOptimization.py", line 17, in <module>
+from RAMOptimization import *
+ModuleNotFoundError: No module named 'RAMOptimization'
+Error opening python file /Users/rafaelrocha/Library/CloudStorage/OneDrive-
+Personal/GitHub/KRSPs/isoldeScripts/runOptimization.py
+> runscript /Users/rafaelrocha/Library/CloudStorage/OneDrive-
+> Personal/GitHub/KRSPs/isoldeScripts/RAMOptimization.py ./
+Traceback (most recent call last):
+File "/Users/rafaelrocha/Library/CloudStorage/OneDrive-
+Personal/GitHub/KRSPs/isoldeScripts/RAMOptimization.py", line 12, in <module>
+from get_Data import *
+ModuleNotFoundError: No module named 'get_Data'
+Error opening python file /Users/rafaelrocha/Library/CloudStorage/OneDrive-
+Personal/GitHub/KRSPs/isoldeScripts/RAMOptimization.py
+> runscript /Users/rafaelrocha/Library/CloudStorage/OneDrive-
+> Personal/GitHub/KRSPs/isoldeScripts/runOptimization.py ./
+Traceback (most recent call last):
+File "/Users/rafaelrocha/Library/CloudStorage/OneDrive-
+Personal/GitHub/KRSPs/isoldeScripts/runOptimization.py", line 17, in <module>
+from RAMOptimization import *
+ModuleNotFoundError: No module named 'RAMOptimization'
+Error opening python file /Users/rafaelrocha/Library/CloudStorage/OneDrive-
+Personal/GitHub/KRSPs/isoldeScripts/runOptimization.py
+> runscript /Users/rafaelrocha/Library/CloudStorage/OneDrive-
+> Personal/GitHub/KRSPs/isoldeScripts/runOptimization.py ./
+Traceback (most recent call last):
+File "/Users/rafaelrocha/Library/CloudStorage/OneDrive-
+Personal/GitHub/KRSPs/isoldeScripts/runOptimization.py", line 17, in <module>
+from RAMOptimization import *
+ModuleNotFoundError: No module named 'RAMOptimization'
+Error opening python file /Users/rafaelrocha/Library/CloudStorage/OneDrive-
+Personal/GitHub/KRSPs/isoldeScripts/runOptimization.py
+> isolde pepflip #1.2/B:144
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde pepflip #1.2/A:281
+ISOLDE: started sim
+> isolde pepflip #1.2/A:281
+[Repeated 4 time(s)]
+> isolde pepflip #1.2/A:280
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 1 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde pepflip #1.2/Es:132
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde pepflip #1.2/BP:108
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde pepflip #1.2/Ab:273
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde pepflip #1.2/C0:74
+ISOLDE: started sim
+> isolde pepflip #1.2/C0:74
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde pepflip #1.2/C0:39
+ISOLDE: started sim
+> isolde pepflip #1.2/C0:39
+[Repeated 1 time(s)]
+> isolde pepflip #1.2/C0:38
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 1 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde pepflip #1.2/B:60
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde sim start #1.2/A:93
+ISOLDE: started sim
+> isolde pepflip #1.2/A:93
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 1 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde sim start #1.2/D:243
+ISOLDE: started sim
+> isolde pepflip #1.2/D:243
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 1 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde sim start #1.2/Ev:226
+ISOLDE: started sim
+> select clear
+> isolde pepflip #1.2/Ev:227
+> select clear
+> isolde pepflip #1.2/Ev:228
+Unable to flip peptide bond after 50 rounds. Giving up.
+> isolde pepflip #1.2/Ev:228
+> isolde cisflip #1.2/Ev:228
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde sim start #1.2/Ab:307
+ISOLDE: started sim
+> isolde pepflip #1.2/Ab:307
+> isolde pepflip #1.2/Ab:306
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 1 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde pepflip #1.2/D6:42
+ISOLDE: started sim
+> isolde pepflip #1.2/D6:41
+[Repeated 1 time(s)]
+> isolde pepflip #1.2/D6:42
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde pepflip #1.2/BI:92
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 1 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde pepflip #1.2/E:539
+ISOLDE: started sim
+> isolde pepflip #1.2/E:538
+> isolde pepflip #1.2/E:539
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde pepflip #1.2/GT:91
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde pepflip #1.2/AU:313
+ISOLDE: started sim
+> isolde pepflip #1.2/AU:312
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde sim start #1.2/A0:309
+ISOLDE: started sim
+> isolde pepflip #1.2/A0:309
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde pepflip #1.2/B:41
+ISOLDE: started sim
+> select clear
+> isolde pepflip #1.2/B:41
+> isolde pepflip #1.2/B:42
+[Repeated 1 time(s)]
+> isolde pepflip #1.2/B:41
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde sim start #1.2/R:6
+ISOLDE: started sim
+> isolde pepflip #1.2/R:7
+> isolde cisflip #1.2/R:8
+> isolde pepflip #1.2/R:7
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde pepflip #1.2/Ek:59
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde pepflip #1.2/A:135
+ISOLDE: started sim
+> isolde cisflip #1.2/A:134
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde pepflip #1.2/C8:34
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde pepflip #1.2/BK:343
+ISOLDE: started sim
+> isolde pepflip #1.2/BK:344
+[Repeated 2 time(s)]
+> isolde cisflip #1.2/BK:342
+[Repeated 1 time(s)]
+> isolde pepflip #1.2/BK:342
+Tugging of non-polar hydrogens is not enabled. Applying tug to the nearest
+bonded heavy atom.
+[Repeated 1 time(s)]
+> select clear
+> isolde pepflip #1.2/BK:344
+[Repeated 1 time(s)]
+Tugging of non-polar hydrogens is not enabled. Applying tug to the nearest
+bonded heavy atom.
+> isolde pepflip #1.2/BK:342
+> isolde pepflip #1.2/BK:344
+[Repeated 1 time(s)]
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 1 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde pepflip #1.2/Aj:668
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 1 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde sim start #1.2/E4:202
+ISOLDE: started sim
+> isolde pepflip #1.2/E4:202
+[Repeated 1 time(s)]
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 1 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde pepflip #1.2/Ev:359
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 1 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde pepflip #1.2/Aj:228
+ISOLDE: started sim
+> isolde pepflip #1.2/Aj:229
+> isolde pepflip #1.2/Aj:228
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 1 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde pepflip #1.2/FO:82
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde pepflip #1.2/FO:76
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde pepflip #1.2/a:61
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde pepflip #1.2/Aj:332
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 1 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde pepflip #1.2/B:44
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 1 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde pepflip #1.2/Es:113
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde pepflip #1.2/IE:169
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde pepflip #1.2/AU:548
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde pepflip #1.2/FO:131
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde pepflip #1.2/Es:74
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde sim start #1.2/C2:39
+ISOLDE: started sim
+> isolde pepflip #1.2/C2:39
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 1 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde pepflip #1.2/C2:38
+ISOLDE: started sim
+> isolde pepflip #1.2/C2:38
+[Repeated 1 time(s)]
+> select clear
+> isolde pepflip #1.2/C2:39
+> select clear
+> isolde pepflip #1.2/C2:40
+> isolde pepflip #1.2/C2:41
+[Repeated 1 time(s)]
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 1 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde pepflip #1.2/IY:81
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde pepflip #1.2/A0:519
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 1 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde pepflip #1.2/R:3
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde pepflip #1.2/GT:81
+ISOLDE: started sim
+> isolde pepflip #1.2/GT:75
+> isolde pepflip #1.2/GT:76
+[Repeated 1 time(s)]
+> isolde pepflip #1.2/GT:75
+[Repeated 1 time(s)]
+Tugging of non-polar hydrogens is not enabled. Applying tug to the nearest
+bonded heavy atom.
+> isolde pepflip #1.2/GT:75
+> isolde pepflip #1.2/GT:77
+[Repeated 1 time(s)]
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 2 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde pepflip #1.2/Es:99
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde pepflip #1.2/D:91
+ISOLDE: started sim
+> isolde pepflip #1.2/D:91
+[Repeated 2 time(s)]
+> isolde pepflip #1.2/D:89
+[Repeated 1 time(s)]
+> isolde pepflip #1.2/D:91
+> isolde pepflip #1.2/D:94
+[Repeated 1 time(s)]
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 2 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde pepflip #1.2/Aj:275
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde pepflip #1.2/FL:40
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde pepflip #1.2/E:452
+ISOLDE: started sim
+> isolde pepflip #1.2/E:451
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde pepflip #1.2/AU:506
+ISOLDE: started sim
+> isolde pepflip #1.2/AU:506
+[Repeated 2 time(s)]
+> isolde pepflip #1.2/AU:507
+> isolde pepflip #1.2/AU:506
+[Repeated 1 time(s)]
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 1 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde pepflip #1.2/D:252
+ISOLDE: started sim
+> isolde pepflip #1.2/D:253
+> isolde pepflip #1.2/D:254
+> isolde pepflip #1.2/D:250
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 2 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde pepflip #1.2/D:50
+ISOLDE: started sim
+> isolde pepflip #1.2/D:49
+> isolde pepflip #1.2/D:52
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde pepflip #1.2/E1:56
+ISOLDE: started sim
+> isolde pepflip #1.2/E1:57
+[Repeated 1 time(s)]
+> isolde pepflip #1.2/E1:58
+Tugging of non-polar hydrogens is not enabled. Applying tug to the nearest
+bonded heavy atom.
+> isolde pepflip #1.2/E1:58
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde pepflip #1.2/E1:58
+ISOLDE: started sim
+> isolde pepflip #1.2/E1:58
+[Repeated 1 time(s)]
+> isolde pepflip #1.2/E1:59
+[Repeated 1 time(s)]
+> isolde pepflip #1.2/E1:60
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 1 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde pepflip #1.2/Es:107
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde pepflip #1.2/JC:54
+ISOLDE: started sim
+> isolde pepflip #1.2/JC:55
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde pepflip #1.2/IY:46
+ISOLDE: started sim
+> isolde pepflip #1.2/IY:46
+[Repeated 4 time(s)]
+> isolde pepflip #1.2/IY:44
+[Repeated 1 time(s)]
+> isolde pepflip #1.2/IY:43
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 2 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde pepflip #1.2/IE:96
+ISOLDE: started sim
+> isolde pepflip #1.2/IE:95
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde pepflip #1.2/D:134
+ISOLDE: started sim
+Tugging of non-polar hydrogens is not enabled. Applying tug to the nearest
+bonded heavy atom.
+> isolde pepflip #1.2/D:135
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde pepflip #1.2/BK:391
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde pepflip #1.2/Aq:131
+ISOLDE: started sim
+> isolde pepflip #1.2/Aq:130
+[Repeated 1 time(s)]
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde pepflip #1.2/IY:165
+ISOLDE: started sim
+> select clear
+> isolde pepflip #1.2/IY:166
+> isolde pepflip #1.2/IY:164
+[Repeated 1 time(s)]
+> isolde pepflip #1.2/IY:166
+> isolde pepflip #1.2/IY:164
+> isolde pepflip #1.2/IY:166
+[Repeated 2 time(s)]
+Tugging of non-polar hydrogens is not enabled. Applying tug to the nearest
+bonded heavy atom.
+> isolde pepflip #1.2/IY:165
+[Repeated 1 time(s)]
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 1 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde sim start #1.2/E4:178
+ISOLDE: started sim
+> isolde pepflip #1.2/E4:178
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde pepflip #1.2/IY:120
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde pepflip #1.2/Es:43
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde pepflip #1.2/a:74
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde pepflip #1.2/AU:359
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde pepflip #1.2/Ev:32
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde pepflip #1.2/AU:391
+ISOLDE: started sim
+> isolde cisflip #1.2/AU:390
+[Repeated 2 time(s)]
+> isolde pepflip #1.2/AU:389
+[Repeated 1 time(s)]
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 1 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde pepflip #1.2/AU:386
+ISOLDE: started sim
+> isolde pepflip #1.2/AU:386
+> isolde pepflip #1.2/AU:387
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde pepflip #1.2/D6:11
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde pepflip #1.2/IE:115
+ISOLDE: started sim
+> isolde pepflip #1.2/IE:116
+[Repeated 1 time(s)]
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde pepflip #1.2/JC:181
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde pepflip #1.2/FO:79
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde pepflip #1.2/Ab:663
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde pepflip #1.2/t3:100
+ISOLDE: started sim
+> isolde pepflip #1.2/t3:100
+> isolde sim stop discardTo start
+Sim termination reason: None
+reverting to start
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde pepflip #1.2/E:361
+ISOLDE: started sim
+> isolde pepflip #1.2/E:361
+[Repeated 1 time(s)]
+> isolde pepflip #1.2/E:362
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde pepflip #1.2/Es:18
+ISOLDE: started sim
+> isolde pepflip #1.2/Es:18
+> isolde pepflip #1.2/Es:19
+[Repeated 1 time(s)]
+> isolde pepflip #1.2/Es:18
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde pepflip #1.2/AU:401
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde pepflip #1.2/a:71
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde pepflip #1.2/Es:22
+ISOLDE: started sim
+> isolde pepflip #1.2/Es:23
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde pepflip #1.2/D:187
+ISOLDE: started sim
+> isolde pepflip #1.2/D:187
+[Repeated 1 time(s)]
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 1 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde pepflip #1.2/Ab:368
+ISOLDE: started sim
+> isolde pepflip #1.2/Ab:369
+[Repeated 2 time(s)]
+> isolde pepflip #1.2/Ab:368
+> isolde pepflip #1.2/Ab:370
+[Repeated 1 time(s)]
+> isolde pepflip #1.2/Ab:371
+[Repeated 2 time(s)]
+> isolde pepflip #1.2/Ab:369
+Tugging of non-polar hydrogens is not enabled. Applying tug to the nearest
+bonded heavy atom.
+> isolde pepflip #1.2/Ab:367
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 3 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde pepflip #1.2/A0:482
+ISOLDE: started sim
+> isolde pepflip #1.2/A0:483
+[Repeated 1 time(s)]
+> isolde pepflip #1.2/A0:484
+> isolde pepflip #1.2/A0:482
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 1 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde pepflip #1.2/FL:76
+ISOLDE: started sim
+> isolde pepflip #1.2/FL:76
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 1 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde pepflip #1.2/E4:187
+ISOLDE: started sim
+> isolde pepflip #1.2/E4:188
+[Repeated 1 time(s)]
+> isolde pepflip #1.2/E4:187
+[Repeated 1 time(s)]
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde pepflip #1.2/E4:107
+ISOLDE: started sim
+> isolde pepflip #1.2/E4:107
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde pepflip #1.2/FL:75
+ISOLDE: started sim
+> isolde pepflip #1.2/FL:75
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde pepflip #1.2/FO:71
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde pepflip #1.2/C:305
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde pepflip #1.2/Ab:312
+ISOLDE: started sim
+> isolde pepflip #1.2/Ab:312
+> isolde pepflip #1.2/Ab:313
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde sim start #1.2/A0:254
+ISOLDE: started sim
+> isolde pepflip #1.2/A0:254
+[Repeated 1 time(s)]Unable to flip peptide bond after 50 rounds. Giving up.
+> isolde pepflip #1.2/A0:254
+[Repeated 1 time(s)]
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 1 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde pepflip #1.2/GT:10
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde pepflip #1.2/C:273
+ISOLDE: started sim
+> isolde pepflip #1.2/C:273
+> isolde pepflip #1.2/C:274
+Tugging of non-polar hydrogens is not enabled. Applying tug to the nearest
+bonded heavy atom.
+> isolde pepflip #1.2/C:273
+> isolde pepflip #1.2/C:274
+[Repeated 1 time(s)]
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 1 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde pepflip #1.2/JC:30
+ISOLDE: started sim
+> isolde pepflip #1.2/JC:30
+> isolde pepflip #1.2/JC:31
+> isolde pepflip #1.2/JC:32
+[Repeated 1 time(s)]
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde pepflip #1.2/C5:35
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde pepflip #1.2/BK:72
+ISOLDE: started sim
+> isolde pepflip #1.2/BK:72
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde pepflip #1.2/Aj:221
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde pepflip #1.2/BK:40
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 1 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde pepflip #1.2/Aj:320
+ISOLDE: started sim
+> isolde pepflip #1.2/Aj:320
+> isolde pepflip #1.2/Aj:322
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde pepflip #1.2/FF:125
+ISOLDE: started sim
+> isolde pepflip #1.2/FF:128
+> isolde pepflip #1.2/FF:127
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde pepflip #1.2/Ab:254
+ISOLDE: started sim
+> isolde pepflip #1.2/Ab:254
+> isolde pepflip #1.2/Ab:255
+> isolde pepflip #1.2/Ab:254
+[Repeated 1 time(s)]
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde pepflip #1.2/Ab:217
+ISOLDE: started sim
+> select clear
+[Repeated 1 time(s)]
+> isolde pepflip #1.2/Ab:218
+[Repeated 1 time(s)]
+> isolde pepflip #1.2/Ab:215
+[Repeated 3 time(s)]Unable to flip peptide bond after 50 rounds. Giving up.
+> isolde pepflip #1.2/Ab:215
+[Repeated 1 time(s)]
+> isolde pepflip #1.2/Ab:213
+> isolde pepflip #1.2/Ab:214
+> isolde pepflip #1.2/AU:87
+> isolde pepflip #1.2/Ab:216
+> isolde pepflip #1.2/Ab:215
+[Repeated 4 time(s)]
+> isolde pepflip #1.2/Ab:216
+[Repeated 1 time(s)]
+> isolde pepflip #1.2/Ab:215
+[Repeated 1 time(s)]
+> isolde pepflip #1.2/Ab:216
+[Repeated 1 time(s)]
+> isolde pepflip #1.2/Ab:214
+> isolde pepflip #1.2/Ab:215
+[Repeated 4 time(s)]
+> isolde pepflip #1.2/Ab:216
+[Repeated 1 time(s)]
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 2 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde pepflip #1.2/Ab:562
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde pepflip #1.2/JC:92
+ISOLDE: started sim
+> isolde pepflip #1.2/JC:92
+> isolde pepflip #1.2/JC:93
+> isolde cisflip #1.2/JC:93
+> isolde pepflip #1.2/JC:93
+Unable to flip peptide bond after 50 rounds. Giving up.
+> isolde cisflip #1.2/JC:93
+> isolde pepflip #1.2/JC:92
+[Repeated 1 time(s)]
+> isolde pepflip #1.2/JC:93
+Unable to flip peptide bond after 50 rounds. Giving up.
+> isolde cisflip #1.2/JC:95
+[Repeated 1 time(s)]
+Tugging of non-polar hydrogens is not enabled. Applying tug to the nearest
+bonded heavy atom.
+> isolde pepflip #1.2/JC:95
+> isolde cisflip #1.2/JC:93
+> isolde pepflip #1.2/JC:92
+[Repeated 1 time(s)]
+> isolde cisflip #1.2/JC:93
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 1 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde pepflip #1.2/JC:23
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 1 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde pepflip #1.2/A0:348
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde pepflip #1.2/A:324
+ISOLDE: started sim
+> select clear
+> isolde pepflip #1.2/A:324
+> isolde pepflip #1.2/A:325
+Unable to flip peptide bond after 50 rounds. Giving up.
+> isolde cisflip #1.2/A:325
+[Repeated 1 time(s)]
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde sim start #1.2/GT:71
+ISOLDE: started sim
+> isolde cisflip #1.2/GT:72
+> isolde pepflip #1.2/GT:72
+Unable to flip peptide bond after 50 rounds. Giving up.
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde pepflip #1.2/E4:101
+ISOLDE: started sim
+> isolde cisflip #1.2/E4:102
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde pepflip #1.2/B:71
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde pepflip #1.2/BK:59
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde pepflip #1.2/Es:123
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde pepflip #1.2/E4:193
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde pepflip #1.2/FO:119
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 1 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde sim start #1.2/E1:64
+ISOLDE: started sim
+> isolde cisflip #1.2/E1:65
+[Repeated 1 time(s)]
+> isolde pepflip #1.2/E1:64
+> isolde pepflip #1.2/E1:62
+> isolde pepflip #1.2/E1:63
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde pepflip #1.2/GT:76
+ISOLDE: started sim
+> isolde pepflip #1.2/GT:75
+> isolde pepflip #1.2/GT:74
+> isolde pepflip #1.2/GT:76
+[Repeated 1 time(s)]
+> isolde pepflip #1.2/GT:77
+> isolde pepflip #1.2/GT:76
+[Repeated 1 time(s)]
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 2 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde pepflip #1.2/GT:71
+ISOLDE: started sim
+> isolde pepflip #1.2/GT:72
+Unable to flip peptide bond after 50 rounds. Giving up.
+> isolde pepflip #1.2/GT:72
+Unable to flip peptide bond after 50 rounds. Giving up.
+> isolde cisflip #1.2/GT:72
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde pepflip #1.2/GT:76
+ISOLDE: started sim
+> isolde pepflip #1.2/GT:76
+[Repeated 2 time(s)]
+> isolde pepflip #1.2/GT:75
+> isolde pepflip #1.2/GT:73
+> isolde pepflip #1.2/GT:74
+> isolde pepflip #1.2/GT:76
+[Repeated 3 time(s)]
+> isolde pepflip #1.2/GT:73
+[Repeated 2 time(s)]
+> isolde pepflip #1.2/GT:74
+> isolde pepflip #1.2/GT:73
+[Repeated 2 time(s)]
+> isolde pepflip #1.2/GT:75
+> isolde pepflip #1.2/GT:79
+> isolde pepflip #1.2/GT:76
+> isolde pepflip #1.2/GT:77
+[Repeated 1 time(s)]
+> isolde pepflip #1.2/GT:76
+> isolde pepflip #1.2/GT:75
+[Repeated 1 time(s)]
+> select clear
+> isolde pepflip #1.2/GT:76
+> isolde pepflip #1.2/GT:74
+> isolde pepflip #1.2/GT:76
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 2 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde pepflip #1.2/C:92
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde pepflip #1.2/A:256
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde pepflip #1.2/FO:117
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde pepflip #1.2/AU:87
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 1 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde pepflip #1.2/Es:5
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde sim start #1.2/K5:31
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde pepflip #1.2/A0:219
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde pepflip #1.2/E:344
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde pepflip #1.2/FO:41
+ISOLDE: started sim
+> isolde pepflip #1.2/FO:41
+> isolde pepflip #1.2/FO:42
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde pepflip #1.2/Aj:283
+ISOLDE: started sim
+Tugging of non-polar hydrogens is not enabled. Applying tug to the nearest
+bonded heavy atom.
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde pepflip #1.2/C8:37
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde pepflip #1.2/JC:112
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 2 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde pepflip #1.2/AU:500
+ISOLDE: started sim
+> isolde pepflip #1.2/AU:501
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde pepflip #1.2/Aj:353
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde pepflip #1.2/IY:62
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde pepflip #1.2/B:57
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde pepflip #1.2/D:173
+ISOLDE: started sim
+> isolde pepflip #1.2/D:174
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde pepflip #1.2/C:326
+ISOLDE: started sim
+> isolde pepflip #1.2/C:326
+Tugging of non-polar hydrogens is not enabled. Applying tug to the nearest
+bonded heavy atom.
+[Repeated 1 time(s)]
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde pepflip #1.2/IY:179
+ISOLDE: started sim
+> select clear
+> isolde pepflip #1.2/IY:179
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 2 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde pepflip #1.2/E:118
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 1 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde sim start #1.2/IY:176
+ISOLDE: started sim
+> isolde cisflip #1.2/IY:176
+[Repeated 1 time(s)]
+> isolde pepflip #1.2/IY:177
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde sim start #1.2/C1:72
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde sim start #1.2/Eq:131
+ISOLDE: started sim
+> isolde pepflip #1.2/Eq:132
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 1 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde sim start #1.2/C4:72
+ISOLDE: started sim
+> isolde pepflip #1.2/C4:74
+> isolde pepflip #1.2/C4:75
+[Repeated 1 time(s)]
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde sim start #1.2/E:60
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde sim start #1.2/Aj:516
+ISOLDE: started sim
+> isolde pepflip #1.2/Aj:517
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 1 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde sim start #1.2/A:166
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde sim start #1.2/FF:100
+ISOLDE: started sim
+> isolde pepflip #1.2/FF:101
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde sim start #1.2/JC:65
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 1 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde sim start #1.2/Aj:231
+ISOLDE: started sim
+> isolde pepflip #1.2/Aj:230
+> isolde pepflip #1.2/Aj:231
+Unable to flip peptide bond after 50 rounds. Giving up.
+> isolde cisflip #1.2/Aj:231
+> select clear
+> isolde pepflip #1.2/Aj:231
+Unable to flip peptide bond after 50 rounds. Giving up.
+> isolde pepflip #1.2/Aj:231
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 1 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde sim start #1.2/Ab:656
+ISOLDE: started sim
+> isolde cisflip #1.2/Ab:656
+> isolde pepflip #1.2/Ab:656
+Unable to flip peptide bond after 50 rounds. Giving up.
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 1 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde sim start #1.2/D:43
+ISOLDE: started sim
+> isolde cisflip #1.2/D:43
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde sim start #1.2/E1:65
+ISOLDE: started sim
+> isolde cisflip #1.2/E1:65
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde sim start #1.2/FL:85
+ISOLDE: started sim
+Tugging of non-polar hydrogens is not enabled. Applying tug to the nearest
+bonded heavy atom.
+[Repeated 4 time(s)]
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 2 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde sim start #1.2/C0:35
+ISOLDE: started sim
+> isolde sim stop discardTo start
+Sim termination reason: None
+reverting to start
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde sim start #1.2/C0:35
+ISOLDE: started sim
+Tugging of non-polar hydrogens is not enabled. Applying tug to the nearest
+bonded heavy atom.
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde sim start #1.2/C0:41
+ISOLDE: started sim
+> isolde pepflip #1.2/C0:41
+[Repeated 1 time(s)]
+Tugging of non-polar hydrogens is not enabled. Applying tug to the nearest
+bonded heavy atom.
+[Repeated 4 time(s)]
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 1 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde sim start #1.2/BK:40
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 1 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde sim start #1.2/BK:40
+ISOLDE: started sim
+> isolde pepflip #1.2/BK:106
+[Repeated 1 time(s)]
+Tugging of non-polar hydrogens is not enabled. Applying tug to the nearest
+bonded heavy atom.
+[Repeated 4 time(s)]
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 1 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde sim start #1.2/Aq:132
+ISOLDE: started sim
+Tugging of non-polar hydrogens is not enabled. Applying tug to the nearest
+bonded heavy atom.
+[Repeated 2 time(s)]
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 2 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde sim start #1.2/Aq:154
+ISOLDE: started sim
+Tugging of non-polar hydrogens is not enabled. Applying tug to the nearest
+bonded heavy atom.
+[Repeated 1 time(s)]
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde sim start #1.2/A0:206
+ISOLDE: started sim
+> isolde pepflip #1.2/A0:207
+[Repeated 1 time(s)]
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 1 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde sim start #1.2/Ev:265
+ISOLDE: started sim
+Tugging of non-polar hydrogens is not enabled. Applying tug to the nearest
+bonded heavy atom.
+[Repeated 1 time(s)]
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 2 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde sim start #1.2/Ab:427
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde sim start #1.2/Eq:68
+ISOLDE: started sim
+Tugging of non-polar hydrogens is not enabled. Applying tug to the nearest
+bonded heavy atom.
+[Repeated 12 time(s)]
+> isolde pepflip #1.2/FL:76
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde sim start #1.2/A:300
+ISOLDE: started sim
+Tugging of non-polar hydrogens is not enabled. Applying tug to the nearest
+bonded heavy atom.
+[Repeated 3 time(s)]
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 1 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde sim start #1.2/R:44
+ISOLDE: started sim
+Tugging of non-polar hydrogens is not enabled. Applying tug to the nearest
+bonded heavy atom.
+[Repeated 3 time(s)]
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 5 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde sim start #1.2/BK:295
+ISOLDE: started sim
+Tugging of non-polar hydrogens is not enabled. Applying tug to the nearest
+bonded heavy atom.
+[Repeated 1 time(s)]
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 1 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde sim start #1.2/FO:127
+ISOLDE: started sim
+Tugging of non-polar hydrogens is not enabled. Applying tug to the nearest
+bonded heavy atom.
+[Repeated 2 time(s)]
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 1 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde sim start #1.2/C:169
+ISOLDE: started sim
+Tugging of non-polar hydrogens is not enabled. Applying tug to the nearest
+bonded heavy atom.
+[Repeated 1 time(s)]
+> isolde pepflip #1.2/C:169
+Tugging of non-polar hydrogens is not enabled. Applying tug to the nearest
+bonded heavy atom.
+[Repeated 1 time(s)]
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 1 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde sim start #1.2/E4:154
+ISOLDE: started sim
+Tugging of non-polar hydrogens is not enabled. Applying tug to the nearest
+bonded heavy atom.
+[Repeated 5 time(s)]
+> isolde pepflip #1.2/E4:154
+Tugging of non-polar hydrogens is not enabled. Applying tug to the nearest
+bonded heavy atom.
+[Repeated 1 time(s)]
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde sim start #1.2/IY:210
+ISOLDE: started sim
+Tugging of non-polar hydrogens is not enabled. Applying tug to the nearest
+bonded heavy atom.
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 4 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde sim start #1.2/C1:65
+ISOLDE: started sim
+Tugging of non-polar hydrogens is not enabled. Applying tug to the nearest
+bonded heavy atom.
+[Repeated 6 time(s)]
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde sim start #1.2/Es:93
+ISOLDE: started sim
+> isolde pepflip #1.2/Es:85
+Tugging of non-polar hydrogens is not enabled. Applying tug to the nearest
+bonded heavy atom.
+[Repeated 1 time(s)]
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 1 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde sim start #1.2/te:38
+ISOLDE: started sim
+> select up
+atoms, 21 bonds, 1 residue, 1 model selected
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde sim start #1.2/Fz:86
+ISOLDE: started sim
+Tugging of non-polar hydrogens is not enabled. Applying tug to the nearest
+bonded heavy atom.
+[Repeated 4 time(s)]
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 3 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde sim start #1.2/Es:110
+ISOLDE: started sim
+Tugging of non-polar hydrogens is not enabled. Applying tug to the nearest
+bonded heavy atom.
+[Repeated 1 time(s)]
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 1 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde sim start #1.2/JC:106
+ISOLDE: started sim
+Tugging of non-polar hydrogens is not enabled. Applying tug to the nearest
+bonded heavy atom.
+[Repeated 7 time(s)]
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 1 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde sim start #1.2/K5:52
+ISOLDE: started sim
+> isolde sim pause
+> select up
+atoms, 21 bonds, 1 residue, 1 model selected
+> ui mousemode right "translate selected atoms"
+> isolde sim resume
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde sim start #1.2/E:484
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde sim start #1.2/IY:126
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 1 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde sim start #1.2/IY:75
+ISOLDE: started sim
+> isolde pepflip #1.2/IY:75
+> isolde pepflip #1.2/IY:76
+[Repeated 2 time(s)]
+> isolde cisflip #1.2/IY:73
+> isolde pepflip #1.2/Ab:596
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 2 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde sim start #1.2/A:272
+ISOLDE: started sim
+Tugging of non-polar hydrogens is not enabled. Applying tug to the nearest
+bonded heavy atom.
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 2 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde sim start #1.2/BI:45
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 1 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde sim start #1.2/FO:78
+ISOLDE: started sim
+> isolde pepflip #1.2/FO:80
+[Repeated 1 time(s)]
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde sim start #1.2/A0:514
+ISOLDE: started sim
+Tugging of non-polar hydrogens is not enabled. Applying tug to the nearest
+bonded heavy atom.
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde sim start #1.2/A0:370
+ISOLDE: started sim
+Tugging of non-polar hydrogens is not enabled. Applying tug to the nearest
+bonded heavy atom.
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 1 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde sim start #1.2/Fy:106
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde sim start #1.2/Ab:464
+ISOLDE: started sim
+Tugging of non-polar hydrogens is not enabled. Applying tug to the nearest
+bonded heavy atom.
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 1 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde sim start #1.2/D:240
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 1 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde sim start #1.2/D:238
+ISOLDE: started sim
+> isolde pepflip #1.2/D:238
+[Repeated 1 time(s)]
+> isolde pepflip #1.2/D:239
+Tugging of non-polar hydrogens is not enabled. Applying tug to the nearest
+bonded heavy atom.
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde sim start #1.2/C3:66
+ISOLDE: started sim
+Tugging of non-polar hydrogens is not enabled. Applying tug to the nearest
+bonded heavy atom.
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde sim start #1.2/C3:72
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde sim start #1.2/Eq:93
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 1 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde sim start #1.2/FL:14
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 1 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde sim start #1.2/Ab:213
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde sim start #1.2/E1:238
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde sim start #1.2/E4:125
+ISOLDE: started sim
+Tugging of non-polar hydrogens is not enabled. Applying tug to the nearest
+bonded heavy atom.
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde sim start #1.2/FF:124
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde sim start #1.2/BP:103
+ISOLDE: started sim
+> isolde pepflip #1.2/BP:101
+> isolde pepflip #1.2/BP:104
+Tugging of non-polar hydrogens is not enabled. Applying tug to the nearest
+bonded heavy atom.
+> isolde pepflip #1.2/BP:102
+[Repeated 1 time(s)]
+> select clear
+> isolde pepflip #1.2/BP:101
+[Repeated 1 time(s)]
+> isolde pepflip #1.2/BP:100
+Tugging of non-polar hydrogens is not enabled. Applying tug to the nearest
+bonded heavy atom.
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 3 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde sim start #1.2/GT:62
+ISOLDE: started sim
+Tugging of non-polar hydrogens is not enabled. Applying tug to the nearest
+bonded heavy atom.
+[Repeated 1 time(s)]
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde sim start #1.2/C6:103
+ISOLDE: started sim
+Tugging of non-polar hydrogens is not enabled. Applying tug to the nearest
+bonded heavy atom.
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde sim start #1.2/FO:104
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde sim start #1.2/A0:518
+ISOLDE: started sim
+> isolde pepflip #1.2/A0:518
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde sim start #1.2/C4:48
+ISOLDE: started sim
+Tugging of non-polar hydrogens is not enabled. Applying tug to the nearest
+bonded heavy atom.
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde sim start #1.2/A0:247
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 1 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde sim start #1.2/E4:182
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 2 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde sim start #1.2/E:539
+ISOLDE: started sim
+> isolde pepflip #1.2/E:539
+> isolde pepflip #1.2/E:540
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 1 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde sim start #1.2/C7:98
+ISOLDE: started sim
+Tugging of non-polar hydrogens is not enabled. Applying tug to the nearest
+bonded heavy atom.
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 2 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde sim start #1.2/BK:515
+ISOLDE: started sim
+Tugging of non-polar hydrogens is not enabled. Applying tug to the nearest
+bonded heavy atom.
+[Repeated 1 time(s)]
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 2 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde sim start #1.2/AU:205
+ISOLDE: started sim
+Tugging of non-polar hydrogens is not enabled. Applying tug to the nearest
+bonded heavy atom.
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 2 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde sim start #1.2/IY:198
+ISOLDE: started sim
+Tugging of non-polar hydrogens is not enabled. Applying tug to the nearest
+bonded heavy atom.
+[Repeated 1 time(s)]
+> isolde pepflip #1.2/JC:87
+> isolde pepflip #1.2/JC:86
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 1 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde sim start #1.2/AU:235
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde sim start #1.2/C1:33
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde sim start #1.2/D:48
+ISOLDE: started sim
+Tugging of non-polar hydrogens is not enabled. Applying tug to the nearest
+bonded heavy atom.
+[Repeated 1 time(s)]
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 1 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde sim start #1.2/E:83
+ISOLDE: started sim
+Tugging of non-polar hydrogens is not enabled. Applying tug to the nearest
+bonded heavy atom.
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde sim start #1.2/A:104
+ISOLDE: started sim
+Tugging of non-polar hydrogens is not enabled. Applying tug to the nearest
+bonded heavy atom.
+[Repeated 2 time(s)]
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde sim start #1.2/C:253
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde sim start #1.2/C2:43
+ISOLDE: started sim
+Tugging of non-polar hydrogens is not enabled. Applying tug to the nearest
+bonded heavy atom.
+> isolde pepflip #1.2/C2:42
+> isolde pepflip #1.2/C2:40
+Tugging of non-polar hydrogens is not enabled. Applying tug to the nearest
+bonded heavy atom.
+[Repeated 1 time(s)]
+> select clear
+[Repeated 1 time(s)]
+> isolde pepflip #1.2/C2:41
+[Repeated 1 time(s)]
+Tugging of non-polar hydrogens is not enabled. Applying tug to the nearest
+bonded heavy atom.
+> isolde pepflip #1.2/C2:42
+[Repeated 1 time(s)]
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde sim start #1.2/AU:226
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde sim start #1.2/AU:548
+ISOLDE: started sim
+> isolde pepflip #1.2/AU:548
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde sim start #1.2/Fy:84
+ISOLDE: started sim
+Tugging of non-polar hydrogens is not enabled. Applying tug to the nearest
+bonded heavy atom.
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 1 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde sim start #1.2/JC:154
+ISOLDE: started sim
+Tugging of non-polar hydrogens is not enabled. Applying tug to the nearest
+bonded heavy atom.
+[Repeated 2 time(s)]
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde sim start #1.2/E:527
+ISOLDE: started sim
+Tugging of non-polar hydrogens is not enabled. Applying tug to the nearest
+bonded heavy atom.
+[Repeated 2 time(s)]
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 2 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde sim start #1.2/FF:167
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 1 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde sim start #1.2/D:179
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 1 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde sim start #1.2/Ab:500
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde sim start #1.2/BK:287
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde sim start #1.2/A:257
+ISOLDE: started sim
+> isolde pepflip #1.2/A:257
+Tugging of non-polar hydrogens is not enabled. Applying tug to the nearest
+bonded heavy atom.
+[Repeated 5 time(s)]
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 2 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde sim start #1.2/BK:417
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde sim start #1.2/E1:64
+ISOLDE: started sim
+> isolde cisflip #1.2/E1:66
+[Repeated 1 time(s)]
+> isolde cisflip #1.2/E1:67
+> isolde cisflip #1.2/E1:66
+> isolde cisflip #1.2/E1:65
+> isolde pepflip #1.2/E1:64
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde sim start #1.2/t2:106
+ISOLDE: started sim
+> select up
+atoms, 14 bonds, 1 residue, 2 models selected
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde sim start #1.2/AU:572
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde sim start #1.2/A0:339
+ISOLDE: started sim
+Tugging of non-polar hydrogens is not enabled. Applying tug to the nearest
+bonded heavy atom.
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 2 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde sim start #1.2/FH:58
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde sim start #1.2/A:142
+ISOLDE: started sim
+Tugging of non-polar hydrogens is not enabled. Applying tug to the nearest
+bonded heavy atom.
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde sim start #1.2/A:135
+ISOLDE: started sim
+Tugging of non-polar hydrogens is not enabled. Applying tug to the nearest
+bonded heavy atom.
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 1 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde sim start #1.2/BK:439
+ISOLDE: started sim
+> isolde pepflip #1.2/BK:438
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde sim start #1.2/D:37
+ISOLDE: started sim
+Tugging of non-polar hydrogens is not enabled. Applying tug to the nearest
+bonded heavy atom.
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde sim start #1.2/AU:91
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 2 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde sim start #1.2/IE:118
+ISOLDE: started sim
+Tugging of non-polar hydrogens is not enabled. Applying tug to the nearest
+bonded heavy atom.
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 1 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde sim start #1.2/A:249
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde sim start #1.2/Aj:567
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde sim start #1.2/E1:117
+ISOLDE: started sim
+Tugging of non-polar hydrogens is not enabled. Applying tug to the nearest
+bonded heavy atom.
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 1 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde sim start #1.2/Fz:98
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde sim start #1.2/E:44
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde sim start #1.2/BK:572
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 1 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde sim start #1.2/B:83
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde sim start #1.2/C:152
+ISOLDE: started sim
+> isolde pepflip #1.2/C:153
+[Repeated 1 time(s)]
+> isolde pepflip #1.2/C:152
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 2 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde sim start #1.2/C:293
+ISOLDE: started sim
+> isolde pepflip #1.2/C:294
+[Repeated 1 time(s)]
+> isolde pepflip #1.2/C:291
+[Repeated 2 time(s)]
+Tugging of non-polar hydrogens is not enabled. Applying tug to the nearest
+bonded heavy atom.
+> isolde pepflip #1.2/C:291
+[Repeated 2 time(s)]
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde sim start #1.2/B:75
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde sim start #1.2/D6:12
+ISOLDE: started sim
+> isolde pepflip #1.2/D6:10
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde sim start #1.2/Ab:455
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 1 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde pepflip #1.2/FH:35
+ISOLDE: started sim
+> select clear
+> isolde pepflip #1.2/FH:35
+> isolde pepflip #1.2/FH:34
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 1 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde sim start #1.2/C9:57
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 1 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde sim start #1.2/FF:102
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde sim start #1.2/AU:111
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 1 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde sim start #1.2/AU:38
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 1 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde sim start #1.2/BI:102
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 1 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde sim start #1.2/E1:106
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde sim start #1.2/AU:327
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 1 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde sim start #1.2/A:118
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde sim start #1.2/Eq:124
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 1 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde sim start #1.2/FL:219
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde sim start #1.2/R:31
+ISOLDE: started sim
+Tugging of non-polar hydrogens is not enabled. Applying tug to the nearest
+bonded heavy atom.
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde sim start #1.2/Ek:87
+ISOLDE: started sim
+> isolde pepflip #1.2/Ek:88
+> isolde pepflip #1.2/Ek:89
+> isolde pepflip #1.2/Ek:88
+Tugging of non-polar hydrogens is not enabled. Applying tug to the nearest
+bonded heavy atom.
+> isolde pepflip #1.2/Ek:87
+[Repeated 1 time(s)]
+> isolde pepflip #1.2/Ek:90
+> isolde pepflip #1.2/Ek:91
+> isolde pepflip #1.2/Ek:90
+Tugging of non-polar hydrogens is not enabled. Applying tug to the nearest
+bonded heavy atom.
+[Repeated 2 time(s)]
+> isolde pepflip #1.2/Ek:88
+[Repeated 2 time(s)]
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 2 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde sim start #1.2/E1:114
+ISOLDE: started sim
+> isolde pepflip #1.2/E1:115
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde sim start #1.2/E1:122
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde sim start #1.2/A0:550
+ISOLDE: started sim
+> isolde pepflip #1.2/A0:552
+[Repeated 1 time(s)]
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 2 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde sim start #1.2/E1:115
+ISOLDE: started sim
+Tugging of non-polar hydrogens is not enabled. Applying tug to the nearest
+bonded heavy atom.
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde sim start #1.2/BK:539
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde sim start #1.2/R:20
+ISOLDE: started sim
+Tugging of non-polar hydrogens is not enabled. Applying tug to the nearest
+bonded heavy atom.
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde sim start #1.2/A0:440
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde sim start #1.2/E:59
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde sim start #1.2/Es:123
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde sim start #1.2/Aj:674
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde sim start #1.2/A:85
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde sim start #1.2/BK:447
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 1 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde sim start #1.2/BI:110
+ISOLDE: started sim
+> isolde pepflip #1.2/BI:110
+[Repeated 1 time(s)]
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde sim start #1.2/A0:658
+ISOLDE: started sim
+> isolde pepflip #1.2/A0:658
+[Repeated 1 time(s)]
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 1 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> save "/Users/rafaelrocha/Library/CloudStorage/GoogleDrive-
+> rafael.eduardo.oliveira.rocha@gmail.com/Other computers/My
+> Computer/supercomplex/supercomplexV-
+> IV2-II/cryosparc_P43_J450_008_volume_map_sharp_NOSEQ/superComplexConsolidation/superComplexConsolidatedV5.cxs"
+Taking snapshot of stepper: superComplexConsolidatedV1.cif
+> show #!2 models
+> volume #2 step 1
+> volume #2 level 0.1727
+> hide #!2 models
+> show #3 models
+> hide #!1 models
+> show #!2 models
+> volume #2 level 0.296
+> show #!1 models
+> molmap #1
+Missing or invalid "resolution" argument: Expected a number
+> molmap #1 resolution 3.5
+Missing or invalid "resolution" argument: Expected a number
+> molmap #1 3.5
+Opened superComplexConsolidatedV1.cif map 3.5 as #4, grid size 226,226,275,
+pixel 1.17, shown at level 0.106, step 1, values float32
+> volume subtract #4 #1
+Opened volume difference as #5, grid size 226,226,275, pixel 1.17, shown at
+step 1, values float32
+> hide #3 models
+> hide #!2 models
+> hide #!1 models
+> close #5
+> show #!1 models
+> volume subtract #1 #4
+Opened volume difference as #5, grid size 500,500,500, pixel 1.21, shown at
+step 1, values float32
+> show #3 models
+> addligand
+Unknown command: isolde addligand
+> isolde add ligand P5S
+place_ligand() was called with use_md_template=True, but no suitable template
+was found. This command has been ignored.
+> select #!
+Expected an objects specifier or a keyword
+> select #1
+atoms, 273204 bonds, 43 pseudobonds, 16656 residues, 23 models selected
+> select up
+atoms, 135 bonds, 1 residue, 1 model selected
+> isolde sim start #1.2/Eq:1000
+Sim termination reason: None
+ISOLDE: stopped sim
+Chain HM, residue 1 specifies more than one residue! The simulation can still
+run, but this will probably cause problems later if not rectified by
+renumbering.
+> isolde replace ligand #1/Eq:1000 3PE
+Deleted the following atoms from residue P5S Eq1000: OXT, O, C, HXT
+atoms were automatically renamed to match the template: P12->P, O15->O12,
+HO15->H1, O16->O11, C3->C1, C1->C3, O19->O31, C17->C31, C20->C32, C21->C33,
+C22->C34, C23->C35, C24->C36, C25->C37, C26->C38, C27->C39, C28->C3A,
+C29->C3B, C30->C3C, C31->C3D, C32->C3E, C33->C3F, C34->C3G, C35->C3H,
+C36->C3I, O37->O21, C38->C21, C39->C22, C40->C23, C41->C24, C42->C25,
+C43->C26, C44->C27, C45->C28, C46->C29, C48->C2A, C49->C2B, C50->C2C,
+C51->C2D, C52->C2E, C53->C2F, C54->C2G, C55->C2H, C56->C2I, O18->O32,
+O47->O22, OG->O13, CB->C11, CA->C12, O13->O14, H1->H31, H1A->H32, H20->H321,
+H20A->H322, H21->H331, H21A->H332, H22->H341, H22A->H342, H23->H351,
+H23A->H352, H24->H361, H24A->H362, H25->H371, H25A->H372, H26->H381,
+H26A->H382, H27->H391, H27A->H392, H28->H3A1, H28A->H3A2, H29->H3B1,
+H29A->H3B2, H3->H11, H3A->H12, H30->H3C1, H30A->H3C2, H31->H3D1, H31A->H3D2,
+H32->H3E1, H32A->H3E2, H33->H3F1, H33A->H3F2, H34->H3G1, H34A->H3G2,
+H35->H3H1, H35A->H3H2, H39->H221, H39A->H222, H40->H231, H40A->H232,
+H41->H241, H41A->H242, H42->H251, H42A->H252, H43->H261, H43A->H262,
+H44->H271, H44A->H272, H45->H281, H45A->H282, H46->H291, H46A->H292,
+H48->H2A1, H48A->H2A2, H49->H2B1, H49A->H2B2, H50->H2C1, H50A->H2C2,
+H51->H2D1, H51A->H2D2, H52->H2E1, H52A->H2E2, H53->H2F1, H53A->H2F2,
+H54->H2G1, H54A->H2G2, H55->H2H1, H55A->H2H2, HA->H121, HB->H111, HBA->H112,
+HN->HN1, HNA->HN2, H36->H3I1, H36A->H3I2, H36B->H3I3, H56->H2I1, H56A->H2I2,
+H56B->H2I3
+Deleted the following atoms from residue 3PE Eq1000: H1
+Traceback (most recent call last):
+File
+"/Applications/ChimeraX-1.9.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-
+packages/chimerax/cmd_line/tool.py", line 319, in execute
+cmd.run(cmd_text)
+File
+"/Applications/ChimeraX-1.9.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-
+packages/chimerax/core/commands/cli.py", line 3213, in run
+result = ci.function(session, **kw_args)
+^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
+File "/Users/rafaelrocha/Library/Application
+Support/ChimeraX/1.9/lib/python/site-
+packages/chimerax/isolde/atomic/building/cmd.py", line 47, in replace_residue
+chiral_centers = Atoms([a for a in residue.atoms if
+residue.ideal_chirality(a.name) != 'N'])
+^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
+File "/Users/rafaelrocha/Library/Application
+Support/ChimeraX/1.9/lib/python/site-
+packages/chimerax/isolde/atomic/building/cmd.py", line 47, in <listcomp>
+chiral_centers = Atoms([a for a in residue.atoms if
+residue.ideal_chirality(a.name) != 'N'])
+^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
+File
+"/Applications/ChimeraX-1.9.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-
+packages/chimerax/atomic/molobject.py", line 659, in ideal_chirality
+return f(self.name.encode('utf-8'), atom_name.encode('utf-8'))
+^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
+KeyError: 'Atom HN3 not in mmCIF Chemical Component Dictionary for 3PE'
+KeyError: 'Atom HN3 not in mmCIF Chemical Component Dictionary for 3PE'
+File
+"/Applications/ChimeraX-1.9.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-
+packages/chimerax/atomic/molobject.py", line 659, in ideal_chirality
+return f(self.name.encode('utf-8'), atom_name.encode('utf-8'))
+^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
+See log for complete Python traceback.
+> delete #1/Eq:1000
+> isolde add ligand P5S
+place_ligand() was called with use_md_template=True, but no suitable template
+was found. This command has been ignored.
+> delete #1/Eq:1000
+> isolde add ligand 3PE
+Deleted the following atoms from residue 3PE Eq1000: H1
+> select up
+atoms, 132 bonds, 1 residue, 1 model selected
+> isolde sim start #1.2/Eq:1000
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> select up
+atoms, 132 bonds, 1 residue, 1 model selected
+> isolde sim start #1.2/Eq:1000
+ISOLDE: started sim
+> hide #!5 models
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde replace ligand #1/Eq:1000 P5S
+Deleted the following atoms from residue 3PE Eq1000: H122, H4
+atoms were automatically renamed to match the template: C12->CA, C11->CB,
+O13->OG, P->P12, H111->HB, H112->HBA, H121->HA, O11->O16, C1->C3, C3->C1,
+O21->O37, C21->C38, C22->C39, C23->C40, C24->C41, C25->C42, C26->C43,
+C27->C44, C28->C45, C29->C46, C2A->C48, C2B->C49, C2C->C50, C2D->C51,
+C2E->C52, C2F->C53, C2G->C54, C2H->C55, C2I->C56, O31->O19, C31->C17,
+C32->C20, C33->C21, C34->C22, C35->C23, C36->C24, C37->C25, C38->C26,
+C39->C27, C3A->C28, C3B->C29, C3C->C30, C3D->C31, C3E->C32, C3F->C33,
+C3G->C34, C3H->C35, C3I->C36, O22->O47, O32->O18, H11->H3, H12->H3A,
+H221->H39, H222->H39A, H231->H40, H232->H40A, H241->H41, H242->H41A,
+H251->H42, H252->H42A, H261->H43, H262->H43A, H271->H44, H272->H44A,
+H281->H45, H282->H45A, H291->H46, H292->H46A, H2A1->H48, H2A2->H48A,
+H2B1->H49, H2B2->H49A, H2C1->H50, H2C2->H50A, H2D1->H51, H2D2->H51A,
+H2E1->H52, H2E2->H52A, H2F1->H53, H2F2->H53A, H2G1->H54, H2G2->H54A,
+H2H1->H55, H2H2->H55A, H31->H1, H32->H1A, H321->H20, H322->H20A, H331->H21,
+H332->H21A, H341->H22, H342->H22A, H351->H23, H352->H23A, H361->H24,
+H362->H24A, H371->H25, H372->H25A, H381->H26, H382->H26A, H391->H27,
+H392->H27A, H3A1->H28, H3A2->H28A, H3B1->H29, H3B2->H29A, H3C1->H30,
+H3C2->H30A, H3D1->H31, H3D2->H31A, H3E1->H32, H3E2->H32A, H3F1->H33,
+H3F2->H33A, H3G1->H34, H3G2->H34A, H3H1->H35, H3H2->H35A, O12->O15, O14->O13,
+H2I1->H56, H2I2->H56A, H2I3->H56B, H3I1->H36, H3I2->H36A, H3I3->H36B, HN3->HN,
+H3->HNA
+Rebuilt ligand P5S has chiral centres at atoms CA,C2 (highlighted). Since the
+current algorithm used to match topologies is not chirality aware, you should
+check these sites carefully to ensure they are sensible. If in doubt, it is
+best to delete with "del #1.2/Eq:1000" and replace with "isolde add ligand
+P5S".
+> select up
+atoms, 135 bonds, 1 residue, 1 model selected
+> isolde sim start #1.2/Eq:1000
+Sim termination reason: None
+ISOLDE: stopped sim
+Traceback (most recent call last):
+File "/Users/rafaelrocha/Library/Application
+Support/ChimeraX/1.9/lib/python/site-
+packages/chimerax/isolde/ui/validation_tab/unparameterised.py", line 160, in
+_table_item_clicked_cb
+residue.atoms.displays = True
+^^^^^^^^^^^^^
+File "atomic_cpp/cymol.pyx", line 1033, in
+chimerax.atomic.cymol.CyResidue.atoms.__get__
+RuntimeError: Residue already deleted
+RuntimeError: Residue already deleted
+File "atomic_cpp/cymol.pyx", line 1033, in
+chimerax.atomic.cymol.CyResidue.atoms.__get__
+See log for complete Python traceback.
+> delete #1/Eq:1000
+> isolde add ligand P5S
+place_ligand() was called with use_md_template=True, but no suitable template
+was found. This command has been ignored.
+> select up
+atoms, 135 bonds, 1 residue, 1 model selected
+Chain HM, residue 1 specifies more than one residue! The simulation can still
+run, but this will probably cause problems later if not rectified by
+renumbering.
+> save "/Users/rafaelrocha/Library/CloudStorage/GoogleDrive-
+> rafael.eduardo.oliveira.rocha@gmail.com/Other computers/My
+> Computer/supercomplex/supercomplexV-
+> IV2-II/cryosparc_P43_J450_008_volume_map_sharp_NOSEQ/superComplexConsolidation/superComplexConsolidatedV5.cxs"
+Taking snapshot of stepper: superComplexConsolidatedV1.cif
+——— End of log from Wed Jan 15 18:04:27 2025 ———
+opened ChimeraX session
+> select up
+atoms, 135 bonds, 1 residue, 1 model selected
+> isolde sim start #1.2/Eq:1000
+Sim termination reason: None
+ISOLDE: stopped sim
+Loading residue template for 3PE from internal database
+Loading residue template for ATP from internal database
+Loading residue template for FAD from internal database
+Loading residue template for LPP from internal database
+Loading residue template for PC1 from internal database
+Chain HM, residue 1 specifies more than one residue! The simulation can still
+run, but this will probably cause problems later if not rectified by
+renumbering.
+> isolde parameterise sel override false
+Running ANTECHAMBER command:
+/Applications/ChimeraX-1.9.app/Contents/bin/amber20/bin/antechamber -ek
+qm_theory='AM1', -i
+/var/folders/6k/vqtllq5921g_007bj4yyl62c0000gn/T/tmp44xcpvsk/ante.in.mol2 -fi
+mol2 -o
+/var/folders/6k/vqtllq5921g_007bj4yyl62c0000gn/T/tmp44xcpvsk/ante.out.mol2 -fo
+mol2 -c bcc -nc 0 -j 5 -s 2 -dr n
+(P5S) ``
+(P5S) `Welcome to antechamber 20.0: molecular input file processor.`
+(P5S) ``
+(P5S) `Info: Finished reading file
+(/var/folders/6k/vqtllq5921g_007bj4yyl62c0000gn/T/tmp44xcpvsk/ante.in.mol2);
+atoms read (136), bonds read (135).`
+(P5S) `Info: Determining atomic numbers from atomic symbols which are case
+sensitive.`
+(P5S) `Running:
+/Applications/ChimeraX-1.9.app/Contents/bin/amber20/bin/bondtype -j part -i
+ANTECHAMBER_BOND_TYPE.AC0 -o ANTECHAMBER_BOND_TYPE.AC -f ac`
+(P5S) ``
+(P5S) ``
+(P5S) `Running:
+/Applications/ChimeraX-1.9.app/Contents/bin/amber20/bin/atomtype -i
+ANTECHAMBER_AC.AC0 -o ANTECHAMBER_AC.AC -p gaff`
+(P5S) `Info: Total number of electrons: 436; net charge: 0`
+(P5S) ``
+(P5S) `Running: /Applications/ChimeraX-1.9.app/Contents/bin/amber20/bin/sqm -O
+-i sqm.in -o sqm.out`
+(P5S) ``
+(P5S) `Running: /Applications/ChimeraX-1.9.app/Contents/bin/amber20/bin/am1bcc
+-i ANTECHAMBER_AM1BCC_PRE.AC -o ANTECHAMBER_AM1BCC.AC -f ac -p
+/Applications/ChimeraX-1.9.app/Contents/bin/amber20/dat/antechamber/BCCPARM.DAT
+-s 2 -j 1`
+(P5S) ``
+(P5S) `Running:
+/Applications/ChimeraX-1.9.app/Contents/bin/amber20/bin/atomtype -f ac -p bcc
+-o ANTECHAMBER_AM1BCC.AC -i ANTECHAMBER_AM1BCC_PRE.AC`
+(P5S) ``
+Charges for residue P5S determined
+OpenMM ffXML file P5S written to the current working directory.
+New template added to forcefield as USER_P5S. This ligand should now work in
+all remaining simulations for this session. To use in future sessions, load
+the ffXML file with ISOLDE's Load Residue MD Definition(s) button.
+> isolde sim start #1.2/Eq:1000
+ISOLDE: started sim
+Tugging of non-polar hydrogens is not enabled. Applying tug to the nearest
+bonded heavy atom.
+[Repeated 3 time(s)]
+> isolde sim stop discardTo start
+Sim termination reason: None
+reverting to start
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> delete #1/Eq:1000
+> isolde add ligand PC1
+> isolde sim start #1.2/E4:1000
+ISOLDE: started sim
+> show #!5 models
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> hide #!5 models
+> save /Users/rafaelrocha/supercomplex/supercomplexV-
+> IV2-II/cryosparc_P43_J450_008_volume_map_sharp_NOSEQ/superComplexConsolidation/superComplexConsolidatedV6.cxs
+Taking snapshot of stepper: superComplexConsolidatedV1.cif
+——— End of log from Wed Jan 15 18:19:59 2025 ———
+opened ChimeraX session
+> select up
+atoms, 273210 bonds, 16656 residues, 7 models selected
+> ui tool show "Volume Viewer"
+> select clear
+> volume #1.1.1.1 level 0.1808
+> show #!5 models
+> hide #!5 models
+> volume #1.1.1.1 level 0.2064
+> delete #1/Eq:1000
+> delete #1/E4:1000
+> isolde add ligand CDL
+place_ligand() was called with use_md_template=True, but no suitable template
+was found. This command has been ignored.
+> select up
+atoms, 255 bonds, 1 residue, 1 model selected
+> isolde sim start #1.2/E4:1000
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> show #!5 models
+> transparency #5.1#1.1.1.1.1 0
+> transparency #5.1#1.1.1.1.1 50
+> transparency #5.1#1.1.1.1.1 0
+> transparency #5.1#1.1.1.1.1 50
+> volume #5 level 0.2465
+> volume #5 level 0.2197
+> hide #!1.1 models
+> show #!1.1 models
+> hide #3 models
+> hide #!1.1 models
+> show #!1.1 models
+> hide #!1.2 models
+> show #!1.2 models
+> isolde add ligand CDL
+place_ligand() was called with use_md_template=True, but no suitable template
+was found. This command has been ignored.
+> select up
+atoms, 3332 bonds, 171 residues, 1 model selected
+> select clear
+> select up
+atoms, 255 bonds, 1 residue, 1 model selected
+> isolde sim start #1.2/E4:1001
+ISOLDE: started sim
+> hide #!1.2 models
+> show #!1.2 models
+> hide #!1.1 models
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde add ligand CDL
+place_ligand() was called with use_md_template=True, but no suitable template
+was found. This command has been ignored.
+> select up
+atoms, 255 bonds, 1 residue, 1 model selected
+> select up
+atoms, 255 bonds, 1 residue, 1 model selected
+> select up
+atoms, 255 bonds, 1 residue, 1 model selected
+> isolde sim start #1.2/E4:1002
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> hide #!1.2 models
+> show #!1.2 models
+> select #1
+atoms, 273834 bonds, 43 pseudobonds, 16658 residues, 29 models selected
+> hide sel cartoons
+> hide sel atoms
+> select #1&ligand
+atoms, 4820 bonds, 38 residues, 1 model selected
+> show sel cartoons
+> show sel atoms
+> isolde add ligand CDL
+place_ligand() was called with use_md_template=True, but no suitable template
+was found. This command has been ignored.
+> select up
+atoms, 255 bonds, 1 residue, 1 model selected
+> isolde sim start #1.2/FL:1000
+ISOLDE: started sim
+> show #!1.1 models
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> volume #1.1.1.1 level 0.335
+> select #1
+atoms, 274089 bonds, 43 pseudobonds, 16659 residues, 29 models selected
+> show sel cartoons
+> show sel atoms
+> hide sel atoms
+> isolde add ligand CDL
+place_ligand() was called with use_md_template=True, but no suitable template
+was found. This command has been ignored.
+> show sel cartoons
+> select up
+atoms, 255 bonds, 1 residue, 1 model selected
+> delete #1/E4:1003
+> select #1&ligand
+atoms, 5075 bonds, 39 residues, 1 model selected
+> show sel cartoons
+> show sel atoms
+> isolde add ligand PC1
+Loading residue template for PC1 from internal database
+> select up
+atoms, 141 bonds, 1 residue, 1 model selected
+> ui mousemode right "translate selected atoms"
+> select #1
+atoms, 274230 bonds, 43 pseudobonds, 16660 residues, 29 models selected
+> select up
+atoms, 141 bonds, 1 residue, 1 model selected
+> isolde sim start #1.2/E4:1003
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> select #1
+atoms, 274230 bonds, 43 pseudobonds, 16660 residues, 29 models selected
+> hide sel cartoons
+> select #1@H*
+atoms, 16654 residues, 1 model selected
+> hide sel atoms
+> volume #5 level 0.2113
+> select up
+atoms, 255 bonds, 1 residue, 1 model selected
+> isolde sim start #1.2/E4:1000
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> select #1
+atoms, 274230 bonds, 43 pseudobonds, 16660 residues, 29 models selected
+> show sel cartoons
+> show sel atoms
+> select up
+atoms, 274230 bonds, 43 pseudobonds, 16660 residues, 29 models selected
+> select up
+atoms, 20 bonds, 1 residue, 2 models selected
+> select up
+atoms, 98 bonds, 5 residues, 2 models selected
+> isolde sim start #1.2/a:35-39
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 1 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde add ligand PC1
+> select up
+atoms, 141 bonds, 1 residue, 1 model selected
+> ui mousemode right "translate selected atoms"
+> select #1@H*
+atoms, 16655 residues, 1 model selected
+> hide sel atoms
+> select #1
+atoms, 274371 bonds, 43 pseudobonds, 16661 residues, 29 models selected
+> select up
+atoms, 141 bonds, 1 residue, 1 model selected
+> isolde sim start #1.2/a:1000
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> select #1
+atoms, 274371 bonds, 43 pseudobonds, 16661 residues, 29 models selected
+> hide sel atoms
+> hide sel cartoons
+> select #1&ligand
+atoms, 5357 bonds, 41 residues, 1 model selected
+> show sel atoms
+> select #1@H*
+atoms, 16655 residues, 1 model selected
+> hide sel atoms
+> select #1
+atoms, 274371 bonds, 43 pseudobonds, 16661 residues, 29 models selected
+> isolde add ligand CDL
+place_ligand() was called with use_md_template=True, but no suitable template
+was found. This command has been ignored.
+> select up
+atoms, 255 bonds, 1 residue, 1 model selected
+> isolde sim start #1.2/Eq:1000
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> select #1
+atoms, 274626 bonds, 43 pseudobonds, 16662 residues, 29 models selected
+> show sel cartoons
+> show sel atoms
+> hide sel cartoons
+> hide sel atoms
+> select #1&ligand
+atoms, 5612 bonds, 42 residues, 1 model selected
+> show sel cartoons
+> show sel atoms
+> select #1@H*
+atoms, 16656 residues, 1 model selected
+> hide sel atoms
+> select #1
+atoms, 274626 bonds, 43 pseudobonds, 16662 residues, 29 models selected
+> isolde add ligand CDL
+place_ligand() was called with use_md_template=True, but no suitable template
+was found. This command has been ignored.
+> select up
+atoms, 255 bonds, 1 residue, 1 model selected
+> isolde sim start #1.2/Es:1000
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde sim start #1.2/Eq:1000
+ISOLDE: started sim
+> select clear
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde add ligand CDL
+place_ligand() was called with use_md_template=True, but no suitable template
+was found. This command has been ignored.
+> select up
+atoms, 255 bonds, 1 residue, 1 model selected
+> isolde sim start #1.2/a:1001
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde add ligand PC1
+> isolde sim start #1.2/FL,a:1001
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> select #1
+atoms, 275277 bonds, 43 pseudobonds, 16665 residues, 29 models selected
+> show sel cartoons
+> show sel atoms
+> select up
+atoms, 18 bonds, 1 residue, 2 models selected
+> select up
+atoms, 203 bonds, 12 residues, 2 models selected
+> isolde sim start #1.2/FL:69-80
+ISOLDE: started sim
+> ui tool show "Ramachandran Plot"
+> isolde pepflip #1.2/FL:71
+[Repeated 2 time(s)]
+> isolde pepflip #1.2/FL:70
+[Repeated 1 time(s)]
+> isolde pepflip #1.2/FL:72
+[Repeated 1 time(s)]
+> isolde pepflip #1.2/FL:71
+[Repeated 3 time(s)]
+> isolde pepflip #1.2/FL:70
+> isolde pepflip #1.2/FL:72
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> select up
+atoms, 15 bonds, 1 residue, 2 models selected
+> select up
+atoms, 203 bonds, 12 residues, 2 models selected
+> select #1@H*
+atoms, 16659 residues, 1 model selected
+> hide sel atoms
+> select up
+atoms, 141 bonds, 1 residue, 1 model selected
+> isolde sim start #1.2/FL:1001
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> select #1
+atoms, 275277 bonds, 43 pseudobonds, 16665 residues, 29 models selected
+> hide sel atoms
+> show sel cartoons
+> hide sel cartoons
+> select #1&ligand
+atoms, 6263 bonds, 45 residues, 1 model selected
+> show sel cartoons
+> show sel atoms
+> select #1@H*
+atoms, 16659 residues, 1 model selected
+> hide sel atoms
+> select #1
+atoms, 275277 bonds, 43 pseudobonds, 16665 residues, 29 models selected
+> show sel atoms
+> show sel cartoons
+> hide sel atoms
+> hide sel cartoons
+> select #1&ligand
+atoms, 6263 bonds, 45 residues, 1 model selected
+> show sel atoms
+> select #1@H*
+atoms, 16659 residues, 1 model selected
+> hide sel atoms
+> isolde add ligand CDL
+place_ligand() was called with use_md_template=True, but no suitable template
+was found. This command has been ignored.
+> select up
+atoms, 255 bonds, 1 residue, 1 model selected
+> isolde sim start #1.2/E1:1000
+ISOLDE: started sim
+> select #1
+atoms, 275532 bonds, 43 pseudobonds, 16666 residues, 29 models selected
+> show sel cartoons
+> show sel atoms
+Tugging of non-polar hydrogens is not enabled. Applying tug to the nearest
+bonded heavy atom.
+> select up
+atoms, 18 bonds, 1 residue, 1 model selected
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 1 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> select #1
+atoms, 275532 bonds, 43 pseudobonds, 16666 residues, 29 models selected
+> show sel cartoons
+> show sel atoms
+> select up
+atoms, 18 bonds, 1 residue, 1 model selected
+> isolde sim start #1.2/E1:99
+ISOLDE: started sim
+> select up
+atoms, 18 bonds, 1 residue, 1 model selected
+> select #1
+atoms, 275532 bonds, 43 pseudobonds, 16666 residues, 29 models selected
+> select #1
+atoms, 275532 bonds, 43 pseudobonds, 16666 residues, 29 models selected
+> hide sel atoms
+> hide sel cartoons
+> select #1&ligand
+atoms, 6518 bonds, 46 residues, 1 model selected
+> show sel atoms
+> select #1@H*
+atoms, 16660 residues, 1 model selected
+> hide sel atoms
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> select #1
+atoms, 275532 bonds, 43 pseudobonds, 16666 residues, 29 models selected
+> hide sel atoms
+> hide sel cartoons
+> select #1&ligand
+atoms, 6518 bonds, 46 residues, 1 model selected
+> show sel atoms
+> select #1@H*
+atoms, 16660 residues, 1 model selected
+> hide sel atoms
+> select clear
+> volume #5 level 0.1845
+> isolde add ligand CDL
+place_ligand() was called with use_md_template=True, but no suitable template
+was found. This command has been ignored.
+> select up
+atoms, 255 bonds, 1 residue, 1 model selected
+> ui mousemode right "translate selected atoms"
+> isolde sim start #1.2/R:1000
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde add ligand CDL
+place_ligand() was called with use_md_template=True, but no suitable template
+was found. This command has been ignored.
+> select up
+atoms, 255 bonds, 1 residue, 1 model selected
+> ui mousemode right "translate selected atoms"
+> isolde sim start #1.2/Es:1001
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde add ligand CDL
+place_ligand() was called with use_md_template=True, but no suitable template
+was found. This command has been ignored.
+> select up
+atoms, 255 bonds, 1 residue, 1 model selected
+> ui mousemode right "translate selected atoms"
+> isolde sim start #1.2/E4:1004
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde add ligand CDL
+place_ligand() was called with use_md_template=True, but no suitable template
+was found. This command has been ignored.
+> select up
+atoms, 255 bonds, 1 residue, 1 model selected
+> select #1&ligand
+atoms, 7538 bonds, 50 residues, 1 model selected
+> select up
+atoms, 255 bonds, 1 residue, 1 model selected
+> isolde sim start #1.2/F9:1000
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> molmap #1 3.5
+Opened superComplexConsolidatedV1.cif map 3.5 as #6, grid size 226,226,275,
+pixel 1.17, shown at level 0.105, step 1, values float32
+> hide #!5 models
+> select up
+atoms, 1455 bonds, 68 residues, 1 model selected
+> select up
+atoms, 276552 bonds, 16670 residues, 1 model selected
+> volume subtract #1 #4
+Opened volume difference as #7, grid size 500,500,500, pixel 1.21, shown at
+step 1, values float32
+> hide #!6 models
+> volume #7 level 0.2094
+> close #6
+> close #7
+> save /Users/rafaelrocha/supercomplex/supercomplexV-
+> IV2-II/cryosparc_P43_J450_008_volume_map_sharp_NOSEQ/superComplexConsolidation/superComplexConsolidatedV6.cxs
+Taking snapshot of stepper: superComplexConsolidatedV1.cif
+——— End of log from Thu Jan 16 15:16:15 2025 ———
+opened ChimeraX session
+> show #!2 models
+> hide #!2 models
+> show #!4 models
+> hide #!4 models
+> show #!4 models
+> hide #!4 models
+> show #!4 models
+> hide #!4 models
+> open "/Users/rafaelrocha/Library/CloudStorage/GoogleDrive-
+> rafael.eduardo.oliveira.rocha@gmail.com/Other computers/My
+> Computer/supercomplex/supercomplexV-
+> IV2-II/cryosparc_P43_J450_008_volume_map_sharp.mrc"
+Opened cryosparc_P43_J450_008_volume_map_sharp.mrc as #6, grid size
+,500,500, pixel 1.21, shown at level 0.118, step 2, values float32
+> volume #6 step 1
+> volume #6 level 0.1867
+> select #1/L3
+atoms, 2500 bonds, 3 pseudobonds, 157 residues, 2 models selected
+> transparency #6.1 50
+> alphafold fetch A0A640KEB4
+Fetching AlphaFold database settings from
+https://www.rbvi.ucsf.edu/chimerax/data/status/alphafold_database3.json
+Chain information for AlphaFold A0A640KEB4 #7
+---
+Chain | Description | UniProt
+A | Uncharacterized protein | A0A640KEB4_LEITA 1-328
+Color AlphaFold A0A640KEB4 by residue attribute pLDDT_score
+> hide #!6 models
+> align #7:212-218@CA toAtoms #1/L3:212-218@CA
+RMSD between 7 atom pairs is 0.684 angstroms
+> hide #7 models
+> select clear
+> align #7:212-259@CA toAtoms #1/L3:212-259@CA
+RMSD between 48 atom pairs is 1.834 angstroms
+> show #7 models
+> alphafold fetch A0A640KIH4
+Chain information for AlphaFold A0A640KIH4 #8
+---
+Chain | Description | UniProt
+A | Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial | A0A640KIH4_LEITA 1-607
+Color AlphaFold A0A640KIH4 by residue attribute pLDDT_score
+> hide #8 models
+> show #8 models
+> hide #!6 models
+> hide #7 models
+> align #8:533-545@CA toAtoms #1/K5:533-545@CA
+RMSD between 13 atom pairs is 0.416 angstroms
+> hide #!6 models
+> show #7 models
+> show #!6 models
+> select #1/L3
+atoms, 2500 bonds, 3 pseudobonds, 157 residues, 2 models selected
+> save "/Users/rafaelrocha/supercomplex/supercomplexV2-IV2-II2-last
+> model/chainL3.cif" models #1 selectedOnly true fixedWidth false
+Not saving entity_poly_seq for non-authoritative sequences
+> save /Users/rafaelrocha/supercomplex/supercomplexV-
+> IV2-II/cryosparc_P43_J450_008_volume_map_sharp_NOSEQ/superComplexConsolidation/chainL3.cif
+> models #1 selectedOnly true fixedWidth false
+Not saving entity_poly_seq for non-authoritative sequences
+> select #1/K5
+atoms, 7592 bonds, 6 pseudobonds, 498 residues, 2 models selected
+> save /Users/rafaelrocha/supercomplex/supercomplexV-
+> IV2-II/cryosparc_P43_J450_008_volume_map_sharp_NOSEQ/superComplexConsolidation/chainK5.cif
+> models #1 selectedOnly true
+Not saving entity_poly_seq for non-authoritative sequences
+> open "/Users/rafaelrocha/Library/CloudStorage/GoogleDrive-
+> rafael.eduardo.oliveira.rocha@gmail.com/Other computers/My
+> Computer/supercomplex/supercomplexV-
+> IV2-II/cryosparc_P43_J450_008_volume_map_sharp_NOSEQ/superComplexConsolidation/chainK5.cif"
+Summary of feedback from opening
+/Users/rafaelrocha/Library/CloudStorage/GoogleDrive-
+rafael.eduardo.oliveira.rocha@gmail.com/Other computers/My
+Computer/supercomplex/supercomplexV-
+IV2-II/cryosparc_P43_J450_008_volume_map_sharp_NOSEQ/superComplexConsolidation/chainK5.cif
+---
+warnings | Unknown polymer entity '46' on line 356
+Missing or incomplete sequence information. Inferred polymer connectivity.
+Chain information for chainK5.cif #9
+---
+Chain | Description
+K5 | No description available
+> select clear
+> select #7:99-113
+atoms, 124 bonds, 15 residues, 1 model selected
+> hide #!6 models
+> select #7:312-325
+atoms, 117 bonds, 14 residues, 1 model selected
+> select ~#1/L3&#1
+atoms, 274052 bonds, 40 pseudobonds, 16513 residues, 31 models selected
+> hide sel atoms
+> hide sel cartoons
+> hide #7 models
+> hide #8 models
+> hide #!9 models
+> show #!9 models
+> hide #!9 models
+> show #!9 models
+> hide #!9 models
+> show #!9 models
+> close #9
+> show #8 models
+> hide #8 models
+> show #7 models
+> show #!6 models
+> hide #!6 models
+> show #!6 models
+> hide #!6 models
+> select #7:312-325
+atoms, 117 bonds, 14 residues, 1 model selected
+> delete #7:326-328
+> delete #7:284-311
+> show #!6 models
+> hide #!6 models
+> show #!6 models
+> hide #!6 models
+> delete #7:1-51
+> delete #1/L3
+> rename #7/A id L3
+Invalid "id" argument: Expected an integer
+> rename #7/A ID L3
+Expected a keyword
+> rename #7/A If L3
+Expected a keyword
+> rename #7/A Id L31
+Expected a keyword
+> changechains #7/A L3
+Chain IDs of 246 residues changed
+> combine #1 #7
+> select #1
+atoms, 274052 bonds, 40 pseudobonds, 16513 residues, 31 models selected
+> select #9
+atoms, 276088 bonds, 41 pseudobonds, 16759 residues, 3 models selected
+> hide sel cartoons
+> select #9
+atoms, 276088 bonds, 41 pseudobonds, 16759 residues, 3 models selected
+> hide sel cartoons
+> show sel atoms
+> show sel cartoons
+> hide sel atoms
+> hide #!7 models
+> show #!7 models
+> hide #!7 models
+> show #8 models
+> hide #8 models
+> hide #!9 models
+> show #!7 models
+> hide #!7 models
+> show #!9 models
+> close #1.2
+Deleting atomic symmetry model...
+Deleting atomic symmetry model...
+> clipper associate #1 toModel #9
+Deleting atomic symmetry model...
+> hide #!1 models
+> hide #!1.1 models
+> show #!1.1 models
+> hide #!1.1 models
+> hide #!1 models
+> combine #9
+> clipper associate #10 toModel #1
+Invalid "toModel" argument: must specify 1 structure, got 0 for "#1"
+> select #10
+atoms, 276088 bonds, 41 pseudobonds, 16759 residues, 3 models selected
+No model chosen to save relative to
+> save /Users/rafaelrocha/supercomplex/supercomplexV-
+> IV2-II/cryosparc_P43_J450_008_volume_map_sharp_NOSEQ/superComplexConsolidation/combinationL3.cif
+> models #10
+Not saving entity_poly_seq for non-authoritative sequences
+> close #9
+Deleting atomic symmetry model...
+> close #1
+Deleting atomic symmetry model...
+> combine #6 to #10
+Expected a keyword
+> clipper associate #6 toModel #10
+Opened cryosparc_P43_J450_008_volume_map_sharp.mrc as #1.1.1.1, grid size
+,500,500, pixel 1.21, shown at level 0.203, step 1, values float32
+> addh #1 hbond false
+Summary of feedback from adding hydrogens to copy of combination #1.2
+---
+warning | Not adding hydrogens to copy of combination #1.2/GT ALA 93 CA because it is missing heavy-atom bond partners
+notes | No usable SEQRES records for copy of combination (#1.2) chain A; guessing termini instead
+No usable SEQRES records for copy of combination (#1.2) chain A0; guessing
+termini instead
+No usable SEQRES records for copy of combination (#1.2) chain AG; guessing
+termini instead
+No usable SEQRES records for copy of combination (#1.2) chain AU; guessing
+termini instead
+No usable SEQRES records for copy of combination (#1.2) chain Ab; guessing
+termini instead
+messages similar to the above omitted
+Termini for copy of combination (#1.2) chain L3 determined from SEQRES records
+Chain-initial residues that are actual N termini: copy of combination #1.2/A
+ALA 34, copy of combination #1.2/A0 PRO 204, copy of combination #1.2/AG PHE
+, copy of combination #1.2/AU LYS 35, copy of combination #1.2/Ab GLU 206,
+copy of combination #1.2/Aj LYS 208, copy of combination #1.2/Aq LYS 25, copy
+of combination #1.2/Ar LEU 23, copy of combination #1.2/B ALA 23, copy of
+combination #1.2/BI ALA 23, copy of combination #1.2/BK THR 37, copy of
+combination #1.2/BP GLY 22, copy of combination #1.2/C SER 85, copy of
+combination #1.2/C0 ILE 33, copy of combination #1.2/C1 ILE 33, copy of
+combination #1.2/C2 ILE 33, copy of combination #1.2/C3 ILE 33, copy of
+combination #1.2/C4 SER 34, copy of combination #1.2/C5 ILE 33, copy of
+combination #1.2/C6 ILE 33, copy of combination #1.2/C7 ILE 33, copy of
+combination #1.2/C8 ILE 33, copy of combination #1.2/C9 ILE 33, copy of
+combination #1.2/D TYR 18, copy of combination #1.2/D6 VAL 7, copy of
+combination #1.2/E PHE 33, copy of combination #1.2/E1 LEU 51, copy of
+combination #1.2/E4 GLN 35, copy of combination #1.2/Ek ASN 26, copy of
+combination #1.2/Eq ASN 62, copy of combination #1.2/Es VAL 2, copy of
+combination #1.2/Ev GLY 3, copy of combination #1.2/F9 HIS 37, copy of
+combination #1.2/FF HIS 98, copy of combination #1.2/FH VAL 18, copy of
+combination #1.2/FL MET 1, copy of combination #1.2/FO PHE 12, copy of
+combination #1.2/Fy PRO 60, copy of combination #1.2/Fz VAL 58, copy of
+combination #1.2/GT ALA 6, copy of combination #1.2/I0 SER 160, copy of
+combination #1.2/IE LYS 26, copy of combination #1.2/IY SER 2, copy of
+combination #1.2/Il TYR 26, copy of combination #1.2/Ix ASP 152, copy of
+combination #1.2/Iy THR 22, copy of combination #1.2/J6 THR 2, copy of
+combination #1.2/JC GLU 22, copy of combination #1.2/JI PRO 11, copy of
+combination #1.2/JJ MET 1, copy of combination #1.2/JN ALA 2, copy of
+combination #1.2/Jw VAL 21, copy of combination #1.2/Jx LYS 11, copy of
+combination #1.2/K5 ALA 14, copy of combination #1.2/KI THR 26, copy of
+combination #1.2/Ke ALA 44, copy of combination #1.2/Kp PRO 53, copy of
+combination #1.2/Ks GLU 4, copy of combination #1.2/LG TRP 20, copy of
+combination #1.2/LO TYR 37, copy of combination #1.2/LR SER 78, copy of
+combination #1.2/LY PRO 182, copy of combination #1.2/M PRO 2, copy of
+combination #1.2/Mg ILE 36, copy of combination #1.2/Mq SER 34, copy of
+combination #1.2/Mr THR 38, copy of combination #1.2/NF LYS 30, copy of
+combination #1.2/NM TYR 82, copy of combination #1.2/Np MET 1, copy of
+combination #1.2/R MET 1, copy of combination #1.2/TB MET 18, copy of
+combination #1.2/Y MET 1, copy of combination #1.2/a TYR 3, copy of
+combination #1.2/t0 THR 38, copy of combination #1.2/t1 THR 2, copy of
+combination #1.2/t2 TYR 37, copy of combination #1.2/t3 PHE 18, copy of
+combination #1.2/t4 LEU 23, copy of combination #1.2/t5 THR 26, copy of
+combination #1.2/t6 MET 1, copy of combination #1.2/t7 MET 1, copy of
+combination #1.2/t8 VAL 21, copy of combination #1.2/t9 ASP 152, copy of
+combination #1.2/ta MET 1, copy of combination #1.2/tb SER 160, copy of
+combination #1.2/tc THR 22, copy of combination #1.2/td TYR 26, copy of
+combination #1.2/te GLU 4, copy of combination #1.2/tf ALA 2, copy of
+combination #1.2/tg PRO 182, copy of combination #1.2/AG PHE 18, copy of
+combination #1.2/Ar LEU 23, copy of combination #1.2/I0 SER 160, copy of
+combination #1.2/Il TYR 26, copy of combination #1.2/Ix ASP 152, copy of
+combination #1.2/Iy THR 22, copy of combination #1.2/J6 THR 2, copy of
+combination #1.2/JI PRO 11, copy of combination #1.2/JI GLU 259, copy of
+combination #1.2/JJ MET 1, copy of combination #1.2/JN ALA 2, copy of
+combination #1.2/Jw VAL 21, copy of combination #1.2/Jx LYS 11, copy of
+combination #1.2/K5 ALA 14, copy of combination #1.2/K5 LYS 143, copy of
+combination #1.2/K5 ARG 299, copy of combination #1.2/K5 LYS 338, copy of
+combination #1.2/K5 ILE 361, copy of combination #1.2/K5 GLU 490, copy of
+combination #1.2/K5 MET 567, copy of combination #1.2/KI THR 26, copy of
+combination #1.2/Ke ALA 44, copy of combination #1.2/Kp PRO 53, copy of
+combination #1.2/Ks GLU 4, copy of combination #1.2/LG TRP 20, copy of
+combination #1.2/LO TYR 37, copy of combination #1.2/LR SER 78, copy of
+combination #1.2/LY PRO 182, copy of combination #1.2/M PRO 2, copy of
+combination #1.2/Mg ILE 36, copy of combination #1.2/Mq SER 34, copy of
+combination #1.2/Mr THR 38, copy of combination #1.2/NF LYS 30, copy of
+combination #1.2/NF ARG 189, copy of combination #1.2/NM TYR 82, copy of
+combination #1.2/Np MET 1, copy of combination #1.2/TB MET 18, copy of
+combination #1.2/Y MET 1, copy of combination #1.2/t0 THR 38, copy of
+combination #1.2/t1 THR 2, copy of combination #1.2/t2 TYR 37, copy of
+combination #1.2/t3 PHE 18, copy of combination #1.2/t4 LEU 23, copy of
+combination #1.2/t5 THR 26, copy of combination #1.2/t6 MET 1, copy of
+combination #1.2/t7 MET 1, copy of combination #1.2/t8 VAL 21, copy of
+combination #1.2/t9 ASP 152, copy of combination #1.2/ta MET 1, copy of
+combination #1.2/tb SER 160, copy of combination #1.2/tc THR 22, copy of
+combination #1.2/td TYR 26, copy of combination #1.2/te GLU 4, copy of
+combination #1.2/tf ALA 2, copy of combination #1.2/tg PRO 182, copy of
+combination #1.2/R MET 1, copy of combination #1.2/A ALA 34, copy of
+combination #1.2/A0 PRO 204, copy of combination #1.2/AU LYS 35, copy of
+combination #1.2/AU GLN 151, copy of combination #1.2/AU GLN 436, copy of
+combination #1.2/Ab GLU 206, copy of combination #1.2/Ab THR 521, copy of
+combination #1.2/Aj LYS 208, copy of combination #1.2/Aq LYS 25, copy of
+combination #1.2/B ALA 23, copy of combination #1.2/BI ALA 23, copy of
+combination #1.2/BK THR 37, copy of combination #1.2/BK GLN 151, copy of
+combination #1.2/BK VAL 437, copy of combination #1.2/BP GLY 22, copy of
+combination #1.2/C SER 85, copy of combination #1.2/C0 ILE 33, copy of
+combination #1.2/C1 ILE 33, copy of combination #1.2/C2 ILE 33, copy of
+combination #1.2/C3 ILE 33, copy of combination #1.2/C4 SER 34, copy of
+combination #1.2/C5 ILE 33, copy of combination #1.2/C6 ILE 33, copy of
+combination #1.2/C7 ILE 33, copy of combination #1.2/C8 ILE 33, copy of
+combination #1.2/C9 ILE 33, copy of combination #1.2/D TYR 18, copy of
+combination #1.2/D ILE 234, copy of combination #1.2/D6 VAL 7, copy of
+combination #1.2/D6 VAL 63, copy of combination #1.2/E PHE 33, copy of
+combination #1.2/E GLN 151, copy of combination #1.2/E GLN 438, copy of
+combination #1.2/E1 LEU 51, copy of combination #1.2/E1 ASP 217, copy of
+combination #1.2/E4 GLN 35, copy of combination #1.2/Ek ASN 26, copy of
+combination #1.2/Eq ASN 62, copy of combination #1.2/Es VAL 2, copy of
+combination #1.2/Ev GLY 3, copy of combination #1.2/F9 HIS 37, copy of
+combination #1.2/FF HIS 98, copy of combination #1.2/FF MET 124, copy of
+combination #1.2/FH VAL 18, copy of combination #1.2/FL MET 1, copy of
+combination #1.2/FO PHE 12, copy of combination #1.2/Fy PRO 60, copy of
+combination #1.2/Fz VAL 58, copy of combination #1.2/IE LYS 26, copy of
+combination #1.2/IE VAL 199, copy of combination #1.2/IY SER 2, copy of
+combination #1.2/JC GLU 22, copy of combination #1.2/a TYR 3, copy of
+combination #1.2/GT ALA 6
+Chain-initial residues that are not actual N termini: copy of combination
+#1.2/AU GLN 151, copy of combination #1.2/AU GLN 436, copy of combination
+#1.2/Ab THR 521, copy of combination #1.2/BK GLN 151, copy of combination
+#1.2/BK VAL 437, copy of combination #1.2/D ILE 234, copy of combination
+#1.2/D6 VAL 63, copy of combination #1.2/E GLN 151, copy of combination #1.2/E
+GLN 438, copy of combination #1.2/E1 ASP 217, copy of combination #1.2/FF MET
+, copy of combination #1.2/IE VAL 199, copy of combination #1.2/JI GLU 259,
+copy of combination #1.2/K5 LYS 143, copy of combination #1.2/K5 ARG 299, copy
+of combination #1.2/K5 LYS 338, copy of combination #1.2/K5 ILE 361, copy of
+combination #1.2/K5 GLU 490, copy of combination #1.2/K5 MET 567, copy of
+combination #1.2/NF ARG 189, copy of combination #1.2/L3 VAL 52, copy of
+combination #1.2/L3 VAL 312
+Chain-final residues that are actual C termini: copy of combination #1.2/A PRO
+, copy of combination #1.2/A0 LYS 685, copy of combination #1.2/AU VAL 574,
+copy of combination #1.2/Ab ARG 690, copy of combination #1.2/Aj HIS 690, copy
+of combination #1.2/Aq GLN 187, copy of combination #1.2/B LYS 160, copy of
+combination #1.2/BI GLN 187, copy of combination #1.2/BK VAL 574, copy of
+combination #1.2/BP GLN 187, copy of combination #1.2/C MET 349, copy of
+combination #1.2/C0 SER 106, copy of combination #1.2/C1 SER 106, copy of
+combination #1.2/C2 SER 106, copy of combination #1.2/C3 SER 106, copy of
+combination #1.2/C4 SER 106, copy of combination #1.2/C5 SER 106, copy of
+combination #1.2/C6 SER 106, copy of combination #1.2/C7 SER 106, copy of
+combination #1.2/C8 SER 106, copy of combination #1.2/C9 SER 106, copy of
+combination #1.2/D VAL 258, copy of combination #1.2/D6 THR 70, copy of
+combination #1.2/E GLY 575, copy of combination #1.2/E1 GLY 239, copy of
+combination #1.2/E4 GLY 203, copy of combination #1.2/Ek SER 103, copy of
+combination #1.2/Eq TYR 145, copy of combination #1.2/Es HIS 136, copy of
+combination #1.2/Ev ALA 386, copy of combination #1.2/F9 GLN 103, copy of
+combination #1.2/FF PRO 174, copy of combination #1.2/FH VAL 157, copy of
+combination #1.2/FL GLY 233, copy of combination #1.2/FO ALA 159, copy of
+combination #1.2/Fy ALA 117, copy of combination #1.2/Fz VAL 105, copy of
+combination #1.2/IE GLY 204, copy of combination #1.2/IY ASN 295, copy of
+combination #1.2/JC GLU 183, copy of combination #1.2/R HIS 62, copy of
+combination #1.2/a GLN 96, copy of combination #1.2/AG SER 196, copy of
+combination #1.2/Ar TRP 118, copy of combination #1.2/I0 LYS 383, copy of
+combination #1.2/Il GLU 104, copy of combination #1.2/Ix ILE 279, copy of
+combination #1.2/Iy GLN 115, copy of combination #1.2/J6 PHE 199, copy of
+combination #1.2/JI PHE 252, copy of combination #1.2/JI LYS 491, copy of
+combination #1.2/JJ ILE 549, copy of combination #1.2/JN VAL 108, copy of
+combination #1.2/Jw PHE 144, copy of combination #1.2/Jx ASP 124, copy of
+combination #1.2/K5 ILE 138, copy of combination #1.2/K5 GLU 268, copy of
+combination #1.2/K5 LEU 311, copy of combination #1.2/K5 VAL 354, copy of
+combination #1.2/K5 ALA 484, copy of combination #1.2/K5 ARG 546, copy of
+combination #1.2/K5 PRO 602, copy of combination #1.2/KI GLU 225, copy of
+combination #1.2/Ke LEU 138, copy of combination #1.2/Kp GLU 224, copy of
+combination #1.2/Ks ALA 156, copy of combination #1.2/LG SER 123, copy of
+combination #1.2/LO LYS 342, copy of combination #1.2/LR GLY 148, copy of
+combination #1.2/LY ALA 345, copy of combination #1.2/M PHE 103, copy of
+combination #1.2/Mg ALA 250, copy of combination #1.2/Mq LYS 90, copy of
+combination #1.2/Mr LEU 147, copy of combination #1.2/NF LEU 183, copy of
+combination #1.2/NF SER 246, copy of combination #1.2/NM MET 144, copy of
+combination #1.2/Np VAL 283, copy of combination #1.2/TB THR 81, copy of
+combination #1.2/Y ILE 210, copy of combination #1.2/t0 LEU 147, copy of
+combination #1.2/t1 PHE 199, copy of combination #1.2/t2 LYS 342, copy of
+combination #1.2/t3 SER 196, copy of combination #1.2/t4 TRP 118, copy of
+combination #1.2/t5 GLU 225, copy of combination #1.2/t6 ILE 549, copy of
+combination #1.2/t7 VAL 283, copy of combination #1.2/t8 PHE 144, copy of
+combination #1.2/t9 ILE 279, copy of combination #1.2/ta ILE 210, copy of
+combination #1.2/tb LYS 383, copy of combination #1.2/tc GLN 115, copy of
+combination #1.2/td GLU 104, copy of combination #1.2/te ALA 156, copy of
+combination #1.2/tf VAL 108, copy of combination #1.2/tg ALA 345, copy of
+combination #1.2/R HIS 62, copy of combination #1.2/A PRO 357, copy of
+combination #1.2/A0 LYS 685, copy of combination #1.2/AU LEU 139, copy of
+combination #1.2/AU ASP 430, copy of combination #1.2/AU VAL 574, copy of
+combination #1.2/Ab VAL 515, copy of combination #1.2/Ab ARG 690, copy of
+combination #1.2/Aj HIS 690, copy of combination #1.2/Aq GLN 187, copy of
+combination #1.2/B LYS 160, copy of combination #1.2/BI GLN 187, copy of
+combination #1.2/BK GLY 138, copy of combination #1.2/BK ASP 430, copy of
+combination #1.2/BK VAL 574, copy of combination #1.2/BP GLN 187, copy of
+combination #1.2/C MET 349, copy of combination #1.2/C0 SER 106, copy of
+combination #1.2/C1 SER 106, copy of combination #1.2/C2 SER 106, copy of
+combination #1.2/C3 SER 106, copy of combination #1.2/C4 SER 106, copy of
+combination #1.2/C5 SER 106, copy of combination #1.2/C6 SER 106, copy of
+combination #1.2/C7 SER 106, copy of combination #1.2/C8 SER 106, copy of
+combination #1.2/C9 SER 106, copy of combination #1.2/D LYS 206, copy of
+combination #1.2/D VAL 258, copy of combination #1.2/D6 LEU 52, copy of
+combination #1.2/D6 THR 70, copy of combination #1.2/E LEU 139, copy of
+combination #1.2/E ALA 429, copy of combination #1.2/E GLY 575, copy of
+combination #1.2/E1 GLU 123, copy of combination #1.2/E1 GLY 239, copy of
+combination #1.2/E4 GLY 203, copy of combination #1.2/Ek SER 103, copy of
+combination #1.2/Eq TYR 145, copy of combination #1.2/Es HIS 136, copy of
+combination #1.2/Ev ALA 386, copy of combination #1.2/F9 GLN 103, copy of
+combination #1.2/FF TYR 118, copy of combination #1.2/FF PRO 174, copy of
+combination #1.2/FH VAL 157, copy of combination #1.2/FL GLY 233, copy of
+combination #1.2/FO ALA 159, copy of combination #1.2/Fy ALA 117, copy of
+combination #1.2/Fz VAL 105, copy of combination #1.2/IE VAL 194, copy of
+combination #1.2/IE GLY 204, copy of combination #1.2/IY ASN 295, copy of
+combination #1.2/JC GLU 183, copy of combination #1.2/a GLN 96, copy of
+combination #1.2/GT ALA 93
+Chain-final residues that are not actual C termini: copy of combination
+#1.2/AG SER 196, copy of combination #1.2/AU LEU 139, copy of combination
+#1.2/AU ASP 430, copy of combination #1.2/Ab VAL 515, copy of combination
+#1.2/Ar TRP 118, copy of combination #1.2/BK GLY 138, copy of combination
+#1.2/BK ASP 430, copy of combination #1.2/D LYS 206, copy of combination
+#1.2/D6 LEU 52, copy of combination #1.2/E LEU 139, copy of combination #1.2/E
+ALA 429, copy of combination #1.2/E1 GLU 123, copy of combination #1.2/FF TYR
+, copy of combination #1.2/GT ALA 93, copy of combination #1.2/I0 LYS 383,
+copy of combination #1.2/IE VAL 194, copy of combination #1.2/Il GLU 104, copy
+of combination #1.2/Ix ILE 279, copy of combination #1.2/Iy GLN 115, copy of
+combination #1.2/J6 PHE 199, copy of combination #1.2/JI LYS 491, copy of
+combination #1.2/JI PHE 252, copy of combination #1.2/JJ ILE 549, copy of
+combination #1.2/JN VAL 108, copy of combination #1.2/Jw PHE 144, copy of
+combination #1.2/Jx ASP 124, copy of combination #1.2/K5 PRO 602, copy of
+combination #1.2/K5 ILE 138, copy of combination #1.2/K5 GLU 268, copy of
+combination #1.2/K5 LEU 311, copy of combination #1.2/K5 VAL 354, copy of
+combination #1.2/K5 ALA 484, copy of combination #1.2/K5 ARG 546, copy of
+combination #1.2/KI GLU 225, copy of combination #1.2/Ke LEU 138, copy of
+combination #1.2/Kp GLU 224, copy of combination #1.2/Ks ALA 156, copy of
+combination #1.2/LG SER 123, copy of combination #1.2/LO LYS 342, copy of
+combination #1.2/LR GLY 148, copy of combination #1.2/LY ALA 345, copy of
+combination #1.2/M PHE 103, copy of combination #1.2/Mg ALA 250, copy of
+combination #1.2/Mq LYS 90, copy of combination #1.2/Mr LEU 147, copy of
+combination #1.2/NF SER 246, copy of combination #1.2/NF LEU 183, copy of
+combination #1.2/NM MET 144, copy of combination #1.2/Np VAL 283, copy of
+combination #1.2/TB THR 81, copy of combination #1.2/Y ILE 210, copy of
+combination #1.2/t0 LEU 147, copy of combination #1.2/t1 PHE 199, copy of
+combination #1.2/t2 LYS 342, copy of combination #1.2/t3 SER 196, copy of
+combination #1.2/t4 TRP 118, copy of combination #1.2/t5 GLU 225, copy of
+combination #1.2/t6 ILE 549, copy of combination #1.2/t7 VAL 283, copy of
+combination #1.2/t8 PHE 144, copy of combination #1.2/t9 ILE 279, copy of
+combination #1.2/ta ILE 210, copy of combination #1.2/tb LYS 383, copy of
+combination #1.2/tc GLN 115, copy of combination #1.2/td GLU 104, copy of
+combination #1.2/te ALA 156, copy of combination #1.2/tf VAL 108, copy of
+combination #1.2/tg ALA 345, copy of combination #1.2/L3 HIS 283, copy of
+combination #1.2/L3 ARG 325
+Missing OXT added to C-terminal residue copy of combination #1.2/AG SER 196
+Missing OXT added to C-terminal residue copy of combination #1.2/Ar TRP 118
+Missing OXT added to C-terminal residue copy of combination #1.2/I0 LYS 383
+Missing OXT added to C-terminal residue copy of combination #1.2/Il GLU 104
+Missing OXT added to C-terminal residue copy of combination #1.2/Ix ILE 279
+messages similar to the above omitted
+Adding 'H' to copy of combination #1.2/L3 VAL 52
+Adding 'H' to copy of combination #1.2/L3 VAL 312
+copy of combination #1.2/L3 ARG 325 is not terminus, removing H atom from 'C'
+hydrogens added
+> select ~#1/L3&#1
+atoms, 274109 bonds, 40 pseudobonds, 16513 residues, 9 models selected
+> hide sel atoms
+> hide sel cartoons
+> open "/Users/rafaelrocha/Library/CloudStorage/GoogleDrive-
+> rafael.eduardo.oliveira.rocha@gmail.com/Other computers/My
+> Computer/supercomplex/supercomplexV-
+> IV2-II/cryosparc_P43_J450_008_volume_map_sharp_NOSEQ/superComplexConsolidation/chainL3.cif"
+Summary of feedback from opening
+/Users/rafaelrocha/Library/CloudStorage/GoogleDrive-
+rafael.eduardo.oliveira.rocha@gmail.com/Other computers/My
+Computer/supercomplex/supercomplexV-
+IV2-II/cryosparc_P43_J450_008_volume_map_sharp_NOSEQ/superComplexConsolidation/chainL3.cif
+---
+warnings | Unknown polymer entity '51' on line 354
+Missing or incomplete sequence information. Inferred polymer connectivity.
+Chain information for chainL3.cif #6
+---
+Chain | Description
+L3 | No description available
+> volume #1.1.1.1 style surface
+> transparency sel 50
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 44 residues in model #1.2 to IUPAC-IUB
+standards.
+> matchmaker #6 to #1.2
+Computing secondary structure
+Parameters
+---
+Chain pairing | bb
+Alignment algorithm | Needleman-Wunsch
+Similarity matrix | BLOSUM-62
+SS fraction | 0.3
+Gap open (HH/SS/other) | 18/18/6
+Gap extend | 1
+SS matrix |  |  | H | S | O
+---|---|---|---
+H | 6 | -9 | -6
+S |  | 6 | -6
+O |  |  | 4
+Iteration cutoff | 2
+Matchmaker copy of combination, chain L3 (#1.2) with chainL3.cif, chain L3
+(#6), sequence alignment score = 562.7
+RMSD between 77 pruned atom pairs is 1.065 angstroms; (across all 157 pairs:
+.079)
+> color #6 bychain
+> color #6 byhetero
+> color modify #6 hue + 50
+Computing secondary structure
+s1:
+ASKEEQIKKNTKIAIEMIRRYKGETPMSYTRKHTATIEQLEREIEALLGGAQKMRKATTDDQPMDKLGLMERCLRHALWSYHKDEGKYDFDEIARWVVYTPEDEVKLAQMKRQVEAKSKLAAYRAKRAEQGLPEAPVPQISWEEEYKNVTDRELVNEKRLRYDTIAANTMERDEAQIEAVLQQYRKPIQDKRLDDLVDLLERFKPVLAREAIMQRLTIKHLEGQLGVWRYMDWCPEVRDRAELEVDISGFQWWSPLEERRLLPVRLRSVNEVREIMAQTQSSKAAEASAHSPQASQSAGDGDRERLLKEVLALQARIHQRDDAP
+s2:
+.............................VNKVPASL..LEKVCNPRLVAFTAMDLARTRFAP.....LYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVL..IRSPDTHPNLQR.................................................................................................................................
+s1:
+PAEHKGRVGYVSQVIGAVVDVHFSEGVPPVLTALDVTEDLGRDEPLTLEIVQHLDANTGRCIAMQTTDLLKLKSKVVSTGGNISVPVGRETLGRIFNVLGDAIDQRGPVGEKMRMAIHAEAPKLADQAAEDTILTTGIKVIDLILPYCKGGKIGLFGGAGVGKTVIIMELINNVAKGHGGFSVFAGVGERTREGTDLYLEMMQSKVIDLKGDSKCVLVYGQMNEPPGARARVAQSALTMAEYFRDVEGQNVLLFIDNIFRFTQANSEVSALLGRIPAAVGYQPTLAEDLGMLQERITSTTKGSITSVQAVYVPADDITDPAPATTFSHLDATTVLDRAVAESGIYPAVNPLECASRIMDPDVIDVNHYNVAQDIVQMLTKYKELQDIIAVLGIDELSEEDKVVVDRARKVTRFLSQPFQVAEVFTGMTGHYVQLNDTVESFSGLLMGSYDQIPEMAFYMVGGINSVLEKAKAMAEEAAAMEK
+s2:
+....................................................................................................................................................................................................................................................................................................VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQP..TP...GVRTAVKDAFDT...SVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR.........................
+s1:
+FFGKGWDNAALDTIFSSMLRKPEVNDRIRTQYASTMDPRDADVLRRLGEVSKENKTFIRVFLPPHLGDPHRLLKCYSLMAYPILDDKGGQLKVEMDGCKLDAFADPDDDYSKVVIPHIELVEYLAKSLLETMKWEATPRGAASLLESLYRGAEIPDHVFQTPAVIERLEDYKDGNKVIS.......................................................................................................
+s2:
+........................................................................................................................VNKVPASLLEKV...CNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFS..KDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+KATEMIGYVHSIDGTIATLIPAPGNPGVAYNTIIMIQVSPTTFAAGLVFNLEKDGRIGIILMDNITEVQSGQKVMATGKLLYIPVGAGVLGKVVNPLGHEVPVGLQTLGKVDAGAPNIVSRSPVNYNLLTGFKAVDTMIPIGRGQRELIVGDRQTGKTSIAVSTIINQVRNNQQI......LSKNAVISIYVSIGQR.CSNVARIHRLLRSYGALRYTTVMAATAAEPAGLQYLAPYSGVTMGEYFMNRGRHCLCVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAAMLSPGKGGGSVTALPIVETLSNDVTAYIVTNVISITDGQIYLDTKLFTGGQRPAVNIGLSVSRVGSSAQNVAMKAVAGKLKGILAEYRKLAADQVQTVPMIRGARFVALFNQKNPSFFMNALVSLYACLNGYLDDVKVNYAKLYEYLLVNKDLSVMYGTATNKFFYMYVQQLNYVIRFFTLNHPILNAEVEEMLKQHTHLFLQHYQSKMNAIKTEKEIKALKNLLYSCKRAV
+s2:
+.............................................................................................................................................................VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVR.TAVKDA..FDTSVCNDIANILRIG.GETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIE.....YPERGEVHV.LIRSPDTHPNLQR...............................................................................................................................................................................................................
+s1:
+EHKGRVGYVSQVIGAVVDVHFSEGVPPVLTALDVTEDLGRDEPLTLEIVQHLDANTGRCIAMQTTDLLKLKSKVVSTGGNISVPVGRETLGRIFNVLGDAIDQRGPVGEKMRMAIHAEAPKLADQAAEDTILTTGIKVIDLILPYCKGGKIGLFGGAGVGKTVIIMELINNVAKGHGGFSVFAGVGERTREGTDLYLEMMQSKVIDLKGDSKCVLVYGQMNEPPGARARVAQSALTMAEYFRDVEGQN...VLLFIDN..IFRFTQANSEVSALLG.RIPAAVGYQPTLAEDLGMLQERITSTTKGSITSVQAVYVTDPAPATTFSHLDATTVLDRAVAESGIYPAVNPLECASRIMDPDVIDVNHYNVAQDIVQMLTKYKELQDIIAVLGIDELSEEDKVVVDRARKVTRFLSQPFQVAEVFTGMTGHYVQLNDTVESFSGLLMGSYDQIPEMAFYMVGGINSVLEKAKAMAEEAAAMEKQRRAR
+s2:
+...........................................................................................................................................................................................................................VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANIL.RIGGET.HAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFND.GPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR...........................................................................................................
+s1:
+KGRVGYVSQVIGAVVDVHFSEGVPPVLTALDVTEDLGRDEPLTLEIVQHLDANTGRCIAMQTTDLLKLKSKVVSTGGNISVPVGRETLGRIFNVLGDAIDQRGPVGEKMRMAIHAEAPKLADQAAEDTILTTGIKVIDLILPYCKGGKIGLFGGAGVGKTVIIMELINNVAKGHGGFSVFAGVGERTREGTDLYLEMMQSKVIDLKGDSKCVLVYGQMNEPPGARARVAQSALTMAEYFRDVEGQNVLLFIDNIFRFTQANSEVSALLGRIPAAVGYQPTLAEDLGMLQERITSTTKGSITSVQAVYVPADDITDPAPATTFSHLDATTVLDRAVAESGIYPAVNPLECASRIMDPDVIDVNHYNVAQDIVQMLTKYKELQDIIAVLGIDELSEEDKVVVDRARKVTRFLSQPFQVAEVFTGMTGHYVQLNDTVESFSGLLMGSYDQIPEMAFYMVGGINSVLEKAKAMAEEAAAMEENKAAH
+s2:
+................................................................................................................................................................................................................................................................................................VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQP..TP...GVRTAVKDAFDT...SVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR..............................
+s1:
+.............................................................KYDLFGYEV..DTNTAPWIEKVKKCRYYDEAGEVLVSMNVKNCPPDLETYNATLQKIFEAPSKQEKPVENESKFCAMMDLMEEMQHRNKVK.....PNEESWTWVMKECVQSGQFRLGYCVAKLMEAEFKRVPEDLVKQNEANAAKAKADGKEHPSTLAQQQSLFDIKIQ
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVP.....YSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR.....................................................................
+s1:
+.....................................................................................LHFPLSPPPIEIDY.LDSDPLEFAVRTEARRWGFDDLQYMRELAFVRIKENPSIGDFRRM..TPEERRDLFWGSDRQDFFRYITLKLTGHPEHLYHRGW
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR...........................
+s1:
+ASDLKMVSLHKILIGEVQFRNNALLKACNIEHNFGPTWKSEIEAYAKSLPAEEKNCLERQIARVSMTRYTTRELAEYCGEGPEHVDAVAREANIAQAKVYAQKNGADKLETYVKAEAKNA....GWSEAETK....KFMDAVKAAK......................................................
+s2:
+.........................................VNKVPASL..LEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+...........................................................AKKYDLFGYEVDTNTAP..WIEKVKKCRYYDEAGEVLVSMNVKNCPPDLETYNATLQKIFEAPSKQEKPVENESKFCAMMDLMEEMQHRNKVK.....PNEESWTWVMKECVQSGQFRLGYCVAKLMEAEFKRVPEDLVKQNEANAAKAKADGKEHPSTLAQQQSLFDIKIQ
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVP.....YSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR.....................................................................
+s1:
+TEMIGYVHSIDGTIATLIPAPGNPGVAYNTIIMIQVSPTTFAAGLVFNLEKDGRIGIILMDNITEVQSGQKVMATGKLLYIPVGAGVLGKVVNPLGHEVPVGQTLGKVDAGAPNIVSRSPVNYNLLTGFKAVDTMIPIGRGQRELIVGDRQTGKTSIAVSTIINQVRNNQQI......LSKNAVISIYVSIGQR.CSNVARIHRLLRSYGALRYTTVMAATAAEPAGLQYLAPYSGVTMGEYFMNRGRHCLCVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAAMLSPGKGGGSVTALPIVETLSNDVTAYIVTNVISITDGQIYLDTKLFTGGQRPAVNIGLSVSRVGSSAQNVAMKAVAGKLKGILAEYRKLAADVQTVPMIRGARFVALFNQKNPSFFMNALVSLYACLNGYLDDVKVNYAKLYEYLLVNKDLSVMYGTATNKFFYMYVQQLNYVIRFFTLNHPILNAEVEEMLKQHTHLFLQHYQSKMNAIKTEKEIKALKNLLYSCKRAV
+s2:
+..........................................................................................................................................................VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVR.TAVKDA..FDTSVCNDIANILRIG.GETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIE.....YPERGEVHV.LIRSPDTHPNLQR..............................................................................................................................................................................................................
+s1:
+........................................................GAKK..YDLFGYEV..DTNTAPWIEKVKKCRYYDEAGEVLVSMNVKNCPPDLETYNATLQKIFEAPSKQEKPVENESKFCAMMDLMEEMQHRNKVK.....PNEESWTWVMKECVQSGQFRLGYCVAKLMEAEFKRVPEDLVKQNEANAAKAKADGKEHPSTLAQQQSLFDIKIQ
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVP.....YSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR.....................................................................
+s1:
+SIAVIAAGAPAALLQAVSSILSKATGGAVKATQATSAA.SNAVVVGMQAPRGVYACVAEPPSTASGPYAGVKTVVVRAILPRSAPDTMQVRDILDVYPASGIACEKETAEAVKNFTKAAKVAVEKAKAMKATRVTLVMKPATKYERLNGLFRETCTKTIEAAGLSVETSTTAAATNTLIMFPEK..MSVVMVSDDPVCENVQYAYAGAVGGVHTTYYTDSGNKIYGGHSYRSVAMALAEELKSLGMKAEAAKVEAAVQKSPRNAAAAM
+s2:
+............VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQ.PTPGVRTAVKDAF......DTSVCNDIANILRIGG.....ET......HAHAHRMALKILDDMNLMRVP...............YSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPD.THPNLQR.................................................................
+s1:
+ISIQGLHYVGTGLGAIALGGVGMGIGTIFGCLLIACARQP.NLTKMLFNYAILGFALTEAIGLFALMLAFLMLFS..........................................................................................................................
+s2:
+...................................VNKVPASLLEKVCNPRLVAFTAMDLAR.....TRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+ISIQGLHYVGTGLGAIALGGVGMGIGTIFGCLLIACARQP.NLTKMLFNYAILGFALTEAIGLFALMLAFLMLFS..........................................................................................................................
+s2:
+...................................VNKVPASLLEKVCNPRLVAFTAMDLAR.....TRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+ISIQGLHYVGTGLGAIALGGVGMGIGTIFGCLLIACARQP.NLTKMLFNYAILGFALTEAIGLFALMLAFLMLFS..........................................................................................................................
+s2:
+...................................VNKVPASLLEKVCNPRLVAFTAMDLAR.....TRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+ISIQGLHYVGTGLGAIALGGVGMGIGTIFGCLLIACARQPNLTKMLFNYAILGFALTEAIGLFALMLAFLMLFS..........................................................................................................................
+s2:
+..................................VNKVPASLLEKVCNPRLVAFTAMDLAR.....TRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+SIQGLHYVGTGLGAIALGGVGMGIGTIFGCLLIACARQP.NLTKMLFNYAILGFALTEAIGLFALMLAFLMLFS..........................................................................................................................
+s2:
+..................................VNKVPASLLEKVCNPRLVAFTAMDLAR.....TRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+ISIQGLHYVGTGLGAIALGGVGMGIGTIFGCLLIACARQP.NLTKMLFNYAILGFALTEAIGLFALMLAFLMLFS..........................................................................................................................
+s2:
+...................................VNKVPASLLEKVCNPRLVAFTAMDLAR.....TRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+ISIQGLHYVGTGLGAIALGGVGMGIGTIFGCLLIACARQP.NLTKMLFNYAILGFALTEAIGLFALMLAFLMLFS..........................................................................................................................
+s2:
+...................................VNKVPASLLEKVCNPRLVAFTAMDLAR.....TRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+ISIQGLHYVGTGLGAIALGGVGMGIGTIFGCLLIACARQPNLTKMLFNYAILGFALTEAIGLFALMLAFLMLFS..........................................................................................................................
+s2:
+..................................VNKVPASLLEKVCNPRLVAFTAMDLAR.....TRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+ISIQGLHYVGTGLGAIALGGVGMGIGTIFGCLLIACARQP.NLTKMLFNYAILGFALTEAIGLFALMLAFLMLFS..........................................................................................................................
+s2:
+...................................VNKVPASLLEKVCNPRLVAFTAMDLAR.....TRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+ISIQGLHYVGTGLGAIALGGVGMGIGTIFGCLLIACARQPNLTKMLFNYAILGFALTEAIGLFALMLAFLMLFS..........................................................................................................................
+s2:
+..................................VNKVPASLLEKVCNPRLVAFTAMDLAR.....TRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+..........YTPSEELKKLYASDFERAQFP...ANIVPSDSVTFAKFLYKAVEPKGSFDAILKDFQTIAAAIPK..LPIFWERTV........VVSEVNEFK.SLSAPTIFTLEWMQSN.GMLDLLPDVAEVYETYVSAKMKRVTAKIYVAPGKEQDRALVDKARKVAEQVVKDNKQLAGYTLVPKVLVDRSIVEGFAVDVQGTYVNEAVGRKIETEVLRKYLDSLSLYDAEELKSGV
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR..................................................................................
+s1:
+VALNWRDHGISYVKYLNVATEALHMATKDKARAKYSRFSTPNYIALVKKVPAFT.....................................................................................................................................................
+s2:
+..............................................VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+FFKATEMIGYVHSIDGTIATLIPAPGNPGVAYNTIIMIQVSPTTFAAGLVFNLEKDGRIGIILMDNITEVQSGQKVMATGKLLYIPVGAGVLGKVVNPLGHEVPVGLQTLGKVDAGAPNIVSRSPVNYNLLTGFKAVDTMIPIGRGQRELIVGDRQTGKTSIAVSTIINQVRNNQQI......LSKNAVISIYVSIGQR.CSNVARIHRLLRSYGALRYTTVMAATAAEPAGLQYLAPYSGVTMGEYFMNRGRHCLCVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAAMLSPGKGGGSVTALPIVETLSNDVTAYIVTNVISITDGQIYLDTKLFTGGQRPAVNIGLSVSRVGSSAQNVAMKAVAGKLKGILAEYRKLAAQTVPMIRGARFVALFNQKNPSFFMNALVSLYACLNGYLDDVKVNYAKLYEYLLVNKDLSVMYGTATNKFFYMYVQQLNYVIRFFTLNHPILNAEVEEMLKQHTHLFLQHYQSKMNAIKTEKEIKALKNLLYSCKRAVG
+s2:
+...............................................................................................................................................................VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVR.TAVKDA..FDTSVCNDIANILRIG.GETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIE.....YPERGEVHV.LIRSPDTHPNLQR.............................................................................................................................................................................................................
+s1:
+LSLLLCVHFSAIHR..PPPPVPFTALA......AFLYALTLTAPVAEQRS..GSSLHPQIEVGTEIEDMALFHLVVLPLVFFAAMCIGRG.........................................................................
+s2:
+...VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYT.SIEQQVAKRFSKDPSKLQPTPGVRTAVKD..AFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+QMKVELTMQYLDEWMLRWRKFQTESDWQIEKNRQWWRKANIVTAGAVMGGLVMYTAGNATIRRQFGAPHFFDIGVDGKLKEAICDTMTSRWRYTPQGYGRVMLVGLPTFFVFAISEHIQERRRLRAYVRQNTVFGEQARRLVQNGKIEEYLAVDIKASLP.QNQTQLYAG....................................................................
+s2:
+.......................................................................VNKVPASLLEKVCN..PRLVAFTAMDLARTRFAPLYT....SIEQQVAKRFSKDPSKLQPT...PGVRTAVKDA.FDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+.............................................................................................................................................NMFLFKDPVRRPQLSPEERAKVKINYAEWPEEFRDYDPDDPYKNSPEIIEGLSSWNLFLWGVECAFIYQFYEVVFPKS
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR..............................................................
+s1:
+....................NPVDHFRPNLKFLSVYVEHQYVVDKWLHVKENWLKPWYLPWW.TPMYQAM.TWYSQRNRNLMLVENHLNYRPYRYRRNDEDREN....PY...................................................
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLAR..TRFAPLYTSIEQQVAKRFSKDPSKLQP..TPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+VFFSTYRSKRIVAPGFLKGPVMASRAFFDYYFQRAWCGCVQWVIPGEVRLWACGVPVIYFIHRYHNDHSLEPDFVEKAMIQRWGG..SLEEVR.KLSPQDQLRIRAFTDLEKLYSAYGPKD.TIVQP.PGDLLPGKDYYH..........................................................................................
+s2:
+..................................................................VNKVPASLLEKVCNPRLVAFTAMDLARTRFAP.......LYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+GTWSVLKKNCLNFVPGLALFASQSRDAFATWMKIYNRGYKYGPQEFSDQAEAYTPDYWKRGHSQEKNMWVDMKLSEEVSQKELAQLMHYKQDLWRMGHGLGLSLFLGGYALIPAFFCLSSDTFAPSCFCKTEEEKKAWREAQDMYRYRSAPSYIMDTKWHFD.FHAYPWN....ATQERAWDDLFEKNNVRRDPKVLRPAAEMYDGFLKFYQIRRKSLRHLARSMNLPTFPLLSRTCASTRVKDYWNLAWNEDYMVITQKLHHQMSDEDLHDYAWRRFLAPYDKNLSRDEIMTRVNDYHEFLGPKFVEEGKAPNMIILTNYVLGYYNDPAYLVEDISALDGNDFEYMAHYGKDAFLRRLEFENGPLRDQVEAHTQKLIADRAAAAAAEA
+s2:
+.......................................................................................................................VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR.................................................................................................................
+s1:
+HLEPMSVWYLSSWTCVWWYSFFFWLPVLWADMIVPSFVYNKLPVIHFIQEKRAEQKLRRVLDETYTQ................................................................................................................................
+s2:
+......................................VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+...............................................HPPKLEDIP.PSSATKGFFGAYMARLIDIKWMMNRSVELGREYYISAPTLYLFLWMFCWKGFVIMRYGDGKPP.............................................
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCN..DIANIL....RIGGE..THAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+................................................................................................................VGNGPTFHTAGDNNNTSEIQNAFPINERG...IRSSSPFPEPNTAIYDSYMPWTYFQPIDVKVDKMPAPEAKYYQHHTKKPWDVSTTDLIEIQSRKKYVQGVGYFLMMIYLYFLMPKEKSYSGTTGSDGFYVMLPKNQPEKFV
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFND.GPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR.................................................................................................
+s1:
+MFVFFVCDLVIMRILLCFCYSVWSRIIFVLFYNVFYICTELMFCIFDVYLFVGLCMFICLWFVLFNFYGLIVYYCITYLNVYILFCIVFMYYMAFLFCFCFLLDFILFGSLLVGDAFMDVFFLRYLLCVLECFSLLCRCISTFLRMFCNLLSSHFLMLMFCDFVYFFIIFFLFFIMCDFIYFIIFTFAMLFCIIFYLFLYALDMFCALLQIFIFCNMIMQLIMDFLL...LLSFHG.......................................................................................................................................
+s2:
+......................................................................................................................................................................................................................VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+FTVPVALCTKQVAAMDEPLKRHIDAYEARGEDVTIAVWREYVDGQRALLPYRWAKFRNEVTYLTSGQIALTDLAFADLLLFVRFLTKCLFIFIVAVMAGRRSVFPS.LEPTSPFVEEIVKN.WQPNRLRRVAGAEYMARDQAAAAAAAAA................................................................
+s2:
+........................................................VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPT.PGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+........................................................................................................PKTLNQFRNFSYIVVAWLGFNKGFREKAANDAEWIAHQQRVRQQNVERHQAASAMMEA
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVP.....YSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+..........................................................................................VAPKTLN.......QFRNFSYIVVAWLGFNKGFREKAANDAEWIAHQQRVRQQNV............
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+AFHDVSTDAIRQMQASEALQKHLENAQLAHRVCVAKALKADEPPVEK.CALTWGEVVMRYNQWSEYRPAFHDSDAQ..KRYSKYWTKKRQA......................................................................................................
+s2:
+....................................VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+SRVSNKISGGMACQTVVNHGYYLKPMTGNPYLCTQHDGVTTAYQQGFAPKDFNWLYRFRYNLLPQGMSGGFFSRNPYGRYVHWLEVSTIEKMRLQMFTMESVPCSVVSLILLVFTMWHSYRLAFLHPDITLYNLG.LWSTKPWVQQQRFNKKKELDQDVYRWMTRVPEVMMDDPIREMYKM.GITANDPVYAMAKEQGVEHELTMTHAEYTSTSPDIRRVIANARK...................................
+s2:
+..................................................................................................VNKVPASLLEKVC......NPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+..................KLYASDFERAQFPANIVPSDSVTFAKFLYKA...VEP........KGSFD.AILKDFQTIAAAIPKLPIFWERTV..VVSEVNEFK.SLSAPTIFTLEWMQSN.GMLDLLPDVAEVYETYVSAKMKRVTAKIYVAPGKEQDRALVDKARKVAEQVVKDNKQLAGYTLVPKVLVDRSIVEGFAVDVVNEAVG
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRF.APLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR...................................................
+s1:
+SGRLRLYKEKLEGYNRFYSIVKTIKMVTMAKFRQAQVRIKTRDYTL..RYTEKAFSKPGQLVGDSPQAKAIYIPVMTNRGSCGALNSNVVKVIDSVASSRAYLMPLGKRGIESLSKLYPSSFRMGIVNDM.HEPMHFAYATYVWENAQQLCPEADRVHIIFHRCVSAGSQKQCYYNIPAYEKWKEDLVDASSTENQKSRYLFANTLLNEDEQMIRDFYDFHATLAILNAVCENELSEQAARLVAVEGQLSNISTLQQKTSSLYNKTRQSSITSSLIEIISAMTSLEGNAAKGVQRTN
+s2:
+.......VNKVPA..SLLEKVCNPRLVAFTAMDLARTRFAPL.YTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAF.DTSVCN.DIANILR.IGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEY..PERGEVHVLIRSPDTHPNLQR.............................................................................................................................
+s1:
+.....YTELSHMKFP..VYYGAVGVVLGYFVVMWVVFLRMGSKHTARSEFKNDYLRVWRRRLGTGYEWADAWGPEMGTFFKDLPEE.........................................................................
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVC..NDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+..........................................................DMHSSDRFKAA.WDEIP..LHMLGASHKQMFEWYWRAMYQLGL.RDPYRLT...KLRSMLNWAALFSFMYLTYISIFYSSFYHVYMM....DWPEHFKRENAREYALSHGHDVWAGDGKFIRPYFHINPPMLTMTSEDI
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR........................................
+s1:
+..........................................................................TYFYANCGETGISGATMQVLLKLTLACCVVQVFAIRYFVFQRLTTKKQFVEDSTDLWESDGTEMDGEEAVANLRIQHERIMPFMNDIKDKLDAQ
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGE...VHVLIRSPDTHPNLQR........
+s1:
+.................................................................................................TMNFGNMTLGGA....MATFGGQSNPMCNYTSPLAKKFV.YKEVGKVHYPLRRHVFRTKVRTAAEIRFNEIVKRYMKEKMTFKRGCYAATITNTVELDHMGSIIPKDEYEVKRLTSYMTSKKMSSDYKKHMQELWTRVLFVCESTNLVGVTENAMHQNSRPGTDEEFMSIIWYSSFVTTLMAFVVTLFIWWYRYGQAPQYAEF
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDN..SPLLFEMIEYPERGEVHVLIRSPDTHPNLQR.............................................................................................................................................
+s1:
+............................ELPEAFEFIEHKVTDKDIHSAYENMETLRLTVTRQDEFLFKETPVKCVTIVGVNGENGVYPGHAYEI.TQLTPAPLTVEMP.DGTVKKFFTSGGFAHINNEGSCDINCVECIPLAELDLDAAEKALAQQQSALSSAHDEKAKAVIEIRIGVLESVIQSLKHMKE
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAF...DTSV.CNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAF....NDGPFD.N....SPLLFEMIEYPERGEVHVLIRSPDTHPNLQR......................
+s1:
+PLATLKPVLAESVATQNVIRRMIGVTTNRKVNASAINSVAEKTKGEGLAGTTAVVARAHLYLLSRNPTDAVAEIDAVLPKVQDEALRRFAIGIRLRSHNELLDMKEASLGVSGGATESEVSDLRSKLQKDYKELVTSSPGCWLVELAAAEYTLYTGASEEAYKSFSSIEKKIQEYIKAPIHVSELVATADNTNEFSLIGFQVRRARPGVKPEGVSASVAEGMANVMADPAAVKALQQAKKAFEEALELVVTLQEANV....GH...HFHDFFPTTPDHYDKWTSEAARSAQQLIQE.ALTPHSVGLKPEAIDRIRVSMTNKAFYDSEEKLHALLKSAPKDKSIIASIRETFGPGPSTPISSSDQAVADAVESVHLAVVSSDTAGATDYAKRGKEIAKALAKQLLYRTQVQKCVALTEMNCLQEAVDVVTPVIDANEYIYMWRAFLARSRAYKGLGLITNADKDLKELNRLKHSLTERTPYEKK
+s2:
+..............................................................................................................................................................................VNKVPASLLEKVC...NPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSK...DPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIE........YPERGEVHVLIRSPDTHPNLQR..........................................................................................................................................
+s1:
+MFWLCLVCLSVSHKMIGLCYLLVAILSGFVGYVYSLFIRLELSLIGCGILFGDYQFYNVLITSHGLIMVFAFIMPVMMGGLVNYFIPVMAGFPDMVFPRLNNMSFWMYLAGFGCVVNGFLTEEGMGVGWTLYPTLICIDFHSSLACDFVMFAVHLLGISSILNSINLLGTLFCCRRKFFSFLSWSLFIWAALITAILLIITLPVLAGGVTLILCDRNFNTSFYDVVG.....GGDLILFQHIFWFFGHPEVYIILLPVFGLISTIVEVIGFR.CVFSTVAMIYSMILIAILGMFVWAHHMFVVGMDVDSRAYFGGVSILIGLPTCVKLFNWIYSFLYTDMIITFEVYFVIMFIFMFLIGAVTGLFLSNVGIDIMLHDTYFVVGHFHYVLSLGAVVGFFTGFIHFLAKWLPIELYLFWMFYFISTLFIGSNMLFFPMHSLGMYAFPRRISDYPVSFLFWSSFMLYGMLLLASLILFLCALFCVFLFWDYCLFFVSLFVFSLYCFFYFSTWLPCVMVLYLLLVDFAHIVLDYLFLILCFCFVFFIFFWQSLFLFFYI
+s2:
+.....................................................................................................................................................VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPT..PGVRTAVKDA.FDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEV....HVLIRSPDTHPNLQR..................................................................................................................................................................................................................................................
+s1:
+.....................................................................................ASCRTGRLPMPDD......PLFNSTHMHGLRHSSRIAGLGMIAVIWIMYEKLRHSHHYITYKGPENPFARIRHRRFPGGAFMFGWGNNGLNRDCGIKEFECWAGYTGKEYTYV
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR.........................................
+s1:
+..................................................................................................................................VAKISSIERASTYLRFSTLRVHPHHEPNFRARPVGWKAWNSKQYMDPWAPYPLTSPVRHVDRPFSGMWFGMGHFALKNFFGPLNWKFWARVSFFGTLGWAYSLSSYALRMHRNGWEWKNRGAVF
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR.................................................................................................
+s1:
+..............................................................................................................................................KVLIADLPMMWPSDMRRFEKEGGVWGQQFRQRRRQLTFALTISAASTLLGSWYVVMRRRNTYFVLFSTFSGFSVLGFCIGMSLAPLWYENVANNKETSMMRRVWWAKECAKHWD
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRS.PDTHPNLQR..................................................................................................
+s1:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPR.......DGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKE.GRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALY..AEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s2:
+.................................................................................................................................................................................................................................................................................................VNKVPASLLEKVCNPRLVAFTAMDLARTRFAP.LYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMR..VPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLI..RSPDTHPNLQR.........................................................
+s1:
+...........................TPYQDKSYPVQPHNLDELQQPPDSWRKSP.IMSKLMDQ.SLPVYDDV..VTGVGRLYWQEPARVWHLFEADDTLMLEEHDREEWNDRPYVAVNHLYEPPIGSEERPIRVEGTGNP..GDQQIVLCFGNCAPHVPQSNYYMMMKGYNKTKCPMCQQWFYIHNRPWLVMHPDWTDEPAADEGPAYTFSEIEAEFDRDFHEFGVYLNAE
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFN...DGPF..DNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR.......................................................................
+s1:
+.............................................................................AEARAVLQAQSHRTVSAVVPGKMFMRHWIVAEQSTVSVVNRVISGMVAVFTMIWAAGYATLGYNGHNSAHVAGWIFIAYWVVLHTHIMWLAPTML
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMR...VPYSAATTEILQAVAFNDGPFDN.SPLLFEMIEYPERGEVHV.....LIRSPDTHPNLQR......
+s1:
+PGQLANYSSPLYMYSHLIKNSTAKTPQLYTAKDNSKTAMHLLTRRGATANYTVNRWYLKE.KVDSSNRMRLEGLYECVLCASCTGSCPQYWWNREHFLGPAVLLQSYRWLVEPLDRDFDERVRMFETGTLVNMCHNIFNCSITCPKFLNPGLASKEIKRLSSPAAKRVGPAIE..........
+s2:
+................VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILR..IGGETHAHAHRMALKILDDMNLMRV.PYSAATTEILQAVAFNDG....PFDNSPLLFEMIE...YPERGEVHVLIRSPDTHPNLQR
+s1:
+.......................................EDHRKYKVQREELPRMPHFNDFNDPRFCGTTNKQKNGILAYYQWLHCIGNWGEEHSMCKKMRWYVERMMHETWLEKWEEKRALGHFDHTILYGVKPWKEFEPLYQPVKKNRKGAYEYWLDR.DFEPLYDADAADWREKAPILHDMFVLGKKPVA
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILR.......IG..GETHAHAHRMALKILDDMNLM...RVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR........................
+s1:
+...............................................WPSKLPLTKNWYYHLSRRD....SIADETRQYMVVGDFLLLFVVSFSMYRLYVLNRNNTYQTHLSHLINYPPAIIANEFDFKDSNANRLVERKDLDAYREDVVRCRAS........
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPG..VRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFD....NSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+................YGHALELDTHNYKFNGEPPSWMKTHAKTEEETSFAKSVLPHIDFASSYECLLFDADRLNTNLNRKEFGNEIKYRLEKQANTVARAQQLLKDKKAGTGPDAAKIENTLIARIFDEEHVQAEMKYVKCIRANELAEDNRLDILPGGSPNSLREKTRWNLNTELHPADRAEIGARLTAWLPEKYHIVYFDDFQTVAANDATARREMLEIVESVQKEYTAEAKEGGYESDLKETVAELMDDVDPTRAITMEAIKSCKDLQQLEDWSRQVHEYNGDDRIIEIYARAAEITKNAEHQALVKQMREWRKLATK
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRF...APLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGET......HAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR............................................................................................................................................................
+s1:
+...................................................................................................SLSTILYSPIGTSMMIMLAYNVIVICSKHVNYSLEITAKDYVQDQQLLTIMRYGILSCILLGMEVMFIEIG
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFN....DGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR.........
+s1:
+..............PRPFGVWA...PATTLAEYRARIPNPFAYSFKWVYSMKREVFYPPEALAHFKDPQQFKDAVDTVIAMRVSDKIFGEGQKLP...RHPVILMLMVLATHGFIIFSGLKYYYGTYMPANNPTWRKTV...NKEWEEAINNSPWDHMSHVWQYSDEYAAALGDTAAPGQRKFYIPA
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPT...PGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPF..DNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR.........................
+s1:
+.........................PATVKRPLWSLLLPQTYTSRIHTLAFHAPSILFMIAVCAIISKQSYYRSSLADE......DPKTYDRIDRRAYVALPDGRMALVYPIIDTQTSFTRTVISFLDAVNPF.................................
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTS.IEQQVAKRFS....KDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRV.P.YSAATTEILQAVAFND..GPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+IYTTWGSVPCEDWARNESWLKRITSQSDYRSFEFWHVPQADVPAGLRLNAVERYLLSSLENDTDRLLHVSWCEDFDPYWHDRVGSLEMLYKIVYTNDYPLYRYIFGNCMHKVAEKEYMLRKLNYLKSVLFWAGRTERCYTSIVKARYYVQRCVWNALERERYLCACVEAVDSFGKKVPEELRQKVMPELEVALVSMRHWVWDCPNGKRTFTRRLA...................................................................................................................
+s2:
+.............................................................................................................................................................................VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+......SLADKIVRGPPKSVYYTHPRYVMSRDKMLHTIWVDIGIFQTCAYALFPFFSAAYFFK.....................................................................................................
+s2:
+VNKVPASLLEKVCN..PRLVAFTAMDLARTRFAPLYT.....SIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+..............TYMLAFNSKAKARPNFGLRGVGYWTSEVYHKPGQNYWMVVCCAGPFLLVGAIMMDGF.WSKLDDIAG....GGPSALDYGWRSQDRKPWDFSFDIGEGYAAGPAVYRPASGAVDL...................................
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRF....APLYTS.IEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGG.ETHAHAHRMALKILDDMNL.MRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+KAVLQLVRFDPETNSSRVESYEYDKHHEYMVLDLLIAVKAHQDPTLAFRSSCCEGVCGSCAMNINGINSLACITFAQHVTTVAPLPNFPVIKDFVVDLR.HFFQQYAYIRPYVRNANLHRSQVDGIVERYNTVARVLSGVSPSEGRAMEKAQEELRETTVAALLRIADAAVDAGNATQALSVLEKVEQQGVVLDSTRVTEMIERALKNFAAKS................................
+s2:
+.................................................................................VNKVP..ASLLEKVCNPRLVAFTAMDLAR..TRFAPLYTSIEQQVAKRFSKDPSKLQP.TPGVRTAVKDAFDTSVCNDIANILRIG.GETHAHAHRMALKILDDMNLMRVPY.SAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+....YETFTPKTLSGRLVMPGNINL..LTVSPLYCAVLCIAAATWGVFYWDIYCRKNYETVLIARPKDM............................................................................................
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRT....AVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+MFVRVIFVGVSGVFVFLSLPAICIVYLTFCLCGLFCIMFGSFIFIDYCFICFFACLLFCLVCLLCDLFVDSLRGLFDVCCFIRCIQYCFVWFIISELLLFLSLFYVVFSLVLFVSVEFAFVFVIPVMFSCLICDFGFVFYWYFIDIFNLLINTFLLFVSGLFVNFVLFLFWFRFFLCVLFMLWVGILFGFLFLWNQVWEFALLFVTCSCGVFGSILFLIDLLHFSHVFLGIFLLFLCFSRCFNFLCMD...TRFVFLYVVCLYWHFVDCVWFFLLRFVYFDVLSVV........................................................................................................
+s2:
+................................................................................................................................................................................................................................VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLY........TSIEQQVAKRFSK.DPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+MFLGGFVPRRFTQLNRDPWWMFFIFSVGAWIGEYPAMQIKYNARDLVLDPHRYVWSHLDDHH..................................................................................................................................
+s2:
+...................................VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+MGHEETTFSRGNRTRNNALQHIYGLMGLCGVGCVLALFSFVSGQRRIQTTITADGTMTKGTC.PT......................................................................................................
+s2:
+..........VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+MAFILSFWMIFLLDSVIVLLSFVCFVCVWICALLFSTVLLVSKLNNIYCTWDFTASKFIDVYWFTIGGMFSLGLLLRLCLLLYFGHLNFVSFDLCKVVGFQWYWVYFIFGETTIFSNLILESDYMIGDLRLLQCNHVLTLLSLVIYKLWLSAVDVIHSFAISSLGVKVDCIPGRCNEIVLFSSNNATVYGQCSELCGVLHGFMPIVICFI.......................................................................................................................
+s2:
+.......................................................................................................................................................................VNKVPASLLEKV...CNPRLVAFTAMDLARTR..FAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+YTRWKCDRIPVLQLKLFTQEYNIMALVGLLSMVFLFKHASYCSEETERKNGWWAGYPYWRDPIARRNEIRYKQLINSNDVDITDPKWTG..CSKEQ......................................................................................................................
+s2:
+.........................................................VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+..............TYMLAFNSKAKARPNFGLRGVGYWTSEVYHKPGQNYWMVVCCAGPFLLVGAIMMDGF.WSKLDDIAG....GGPSALDYGWRSQDRKPWDFSFDIGEGYAAGPAVYRPASGAVDL...................................
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRF....APLYTS.IEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGG.ETHAHAHRMALKILDDMNL.MRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+.................................................................................................TMNFGNMTLGGA....MATFGGQSNPMCNYTSPLAKKFV.YKEVGKVHYPLRRHVFRTKVRTAAEIRFNEIVKRYMKEKMTFKRGCYAATITNTVELDHMGSIIPKDEYEVKRLTSYMTSKKMSSDYKKHMQELWTRVLFVCESTNLVGVTENAMHQNSRPGTDEEFMSIIWYSSFVTTLMAFVVTLFIWWYRYGQAPQYAEF
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDN..SPLLFEMIEYPERGEVHVLIRSPDTHPNLQR.............................................................................................................................................
+s1:
+................YGHALELDTHNYKFNGEPPSWMKTHAKTEEETSFAKSVLPHIDFASSYECLLFDADRLNTNLNRKEFGNEIKYRLEKQANTVARAQQLLKDKKAGTGPDAAKIENTLIARIFDEEHVQAEMKYVKCIRANELAEDNRLDILPGGSPNSLREKTRWNLNTELHPADRAEIGARLTAWLPEKYHIVYFDDFQTVAANDATARREMLEIVESVQKEYTAEAKEGGYESDLKETVAELMDDVDPTRAITMEAIKSCKDLQQLEDWSRQVHEYNGDDRIIEIYARAAEITKNAEHQALVKQMREWRKLATK
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRF...APLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGET......HAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR............................................................................................................................................................
+s1:
+FFGKGWDNAALDTIFSSMLRKPEVNDRIRTQYASTMDPRDADVLRRLGEVSKENKTFIRVFLPPHLGDPHRLLKCYSLMAYPILDDKGGQLKVEMDGCKLDAFADPDDDYSKVVIPHIELVEYLAKSLLETMKWEATPRGAASLLESLYRGAEIPDHVFQTPAVIERLEDYKDGNKVIS.......................................................................................................
+s2:
+........................................................................................................................VNKVPASLLEKV...CNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFS..KDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+.....................................................................................LHFPLSPPPIEIDY.LDSDPLEFAVRTEARRWGFDDLQYMRELAFVRIKENPSIGDFRRM..TPEERRDLFWGSDRQDFFRYITLKLTGHPEHLYHRGW
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR...........................
+s1:
+...........................TPYQDKSYPVQPHNLDELQQPPDSWRKSPIMSKLMDQSL..PVYDDV..VTGVGRLYWQEPARVWHLFEADDTLMLEEHDREEWNDRPYVAVNHLYEPPIGSEERPIRVEGTGNP..GDQQIVLCFGNCAPHVPQSNYYMMMKGYNKTKCPMCQQWFYIHNRPWLVMHPDWTDEPAADEGPAYTFSEIEAEFDRDFHEFGVYLNAE
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFN...DGPF..DNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR.......................................................................
+s1:
+MFWLCLVCLSVSHKMIGLCYLLVAILSGFVGYVYSLFIRLELSLIGCGILFGDYQFYNVLITSHGLIMVFAFIMPVMMGGLVNYFIPVMAGFPDMVFPRLNNMSFWMYLAGFGCVVNGFLTEEGMGVGWTLYPTLICIDFHSSLACDFVMFAVHLLGISSILNSINLLGTLFCCRRKFFSFLSWSLFIWAALITAILLIITLPVLAGGVTLILCDRNFNTSFYDVVG.....GGDLILFQHIFWFFGHPEVYIILLPVFGLISTIVEVIGFR.CVFSTVAMIYSMILIAILGMFVWAHHMFVVGMDVDSRAYFGGVSILIGLPTCVKLFNWIYSFLYTDMIITFEVYFVIMFIFMFLIGAVTGLFLSNVGIDIMLHDTYFVVGHFHYVLSLGAVVGFFTGFIHFLAKWLPIELYLFWMFYFISTLFIGSNMLFFPMHSLGMYAFPRRISDYPVSFLFWSSFMLYGMLLLASLILFLCALFCVFLFWDYCLFFVSLFVFSLYCFFYFSTWLPCVMVLYLLLVDFAHIVLDYLFLILCFCFVFFIFFWQSLFLFFYI
+s2:
+.....................................................................................................................................................VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPT..PGVRTAVKDA.FDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEV....HVLIRSPDTHPNLQR..................................................................................................................................................................................................................................................
+s1:
+MFVRVIFVGVSGVFVFLSLPAICIVYLTFCLCGLFCIMFGSFIFIDYCFICFFACLLFCLVCLLCDLFVDSLRGLFDVCCFIRCIQYCFVWFIISELLLFLSLFYVVFSLVLFVSVEFAFVFVIPVMFSCLICDFGFVFYWYFIDIFNLLINTFLLFVSGLFVNFVLFLFWFRFFLCVLFMLWVGILFGFLFLWNQVWEFALLFVTCSCGVFGSILFLIDLLHFSHVFLGIFLLFLCFSRCFNFLCMD...TRFVFLYVVCLYWHFVDCVWFFLLRFVYFDVLSVV........................................................................................................
+s2:
+................................................................................................................................................................................................................................VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLY........TSIEQQVAKRFSK.DPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+..................................................................................................................................VAKISSIERASTYLRFSTLRVHPHHEPNFRARPVGWKAWNSKQYMDPWAPYPLTSPVRHVDRPFSGMWFGMGHFALKNFFGPLNWKFWARVSFFGTLGWAYSLSSYALRMHRNGWEWKNRGAVF
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR.................................................................................................
+s1:
+..........................................................DMHSSDRFKAA.WDEIP..LHMLGASHKQMFEWYWRAMYQLGL.RDPYRLT...KLRSMLNWAALFSFMYLTYISIFYSSFYHVYMM....DWPEHFKRENAREYALSHGHDVWAGDGKFIRPYFHINPPMLTMTSEDI
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR........................................
+s1:
+MAFILSFWMIFLLDSVIVLLSFVCFVCVWICALLFSTVLLVSKLNNIYCTWDFTASKFIDVYWFTIGGMFSLGLLLRLCLLLYFGHLNFVSFDLCKVVGFQWYWVYFIFGETTIFSNLILESDYMIGDLRLLQCNHVLTLLSLVIYKLWLSAVDVIHSFAISSLGVKVDCIPGRCNEIVLFSSNNATVYGQCSELCGVLHGFMPIVICFI.......................................................................................................................
+s2:
+.......................................................................................................................................................................VNKVPASLLEKV...CNPRLVAFTAMDLARTR..FAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+SRVSNKISGGMACQTVVNHGYYLKPMTGNPYLCTQHDGVTTAYQQGFAPKDFNWLYRFRYNLLPQGMSGGFFSRNPYGRYVHWLEVSTIEKMRLQMFTMESVPCSVVSLILLVFTMWHSYRLAFLHPDITLYNLG.LWSTKPWVQQQRFNKKKELDQDVYRWMTRVPEVMMDDPIREMYK.MGITANDPVYAMAKEQGVEHELTMTHAEYTSTSPDIRRVIANARK...................................
+s2:
+..................................................................................................VNKVPASLLEKVC......NPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+..........................................................................TYFYANCGETGISGATMQVLLKLTLACCVVQVFAIRYFVFQRLTTKKQFVEDSTDLWESDGTEMDGEEAVANLRIQHERIMPFMNDIKDKLDAQ
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGE...VHVLIRSPDTHPNLQR........
+s1:
+.....................YTELSHMKF.PVYYGAVGVVLGYFVVMWVVFLRMGSKHTA.RSEFKNDYLRVWRRRLGTGYEWADAWGPEMGTFFKDLPEE........................................................
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGE.THAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+.......................................EDHRKYKVQREELPRMPHFNDFNDPRFCGTTNKQKNGILAYYQWLHCIGNWGEEHSMCKKMRWYVERMMHETWLEKWEEKRALGHFDHTILYGVKPWKEFEPLYQPVKKNRKGAYEYWLDR.DFEPLYDADAADWREKAPILHDMFVLGKKPVA
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILR.......IG..GETHAHAHRMALKILDDMNLM...RVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR........................
+s1:
+.....................................................................................ASCRTGRLPMPDD......PLFNSTHMHGLRHSSRIAGLGMIAVIWIMYEKLRHSHHYITYKGPENPFARIRHRRFPGGAFMFGWGNNGLNRDCGIKEFECWAGYTGKEYTYV
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR.........................................
+s1:
+..............PRPFGVWA...PATTLAEYRARIPNPFAYSFKWVYSMKREVFYPPEALAHFKDPQQFKDAVDTVIAMRVSDKIFGEGQKLP...RHPVILMLMVLATHGFIIFSGLKYYYGTYMPANNPTWRKTVNKEWEEAIN...NSPWDHMSHVWQYSDEYAAALGDTAAPGQRKFYIPA
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPT...PGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPF..DNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR.........................
+s1:
+MLRRHAYKTAACVTAIQVARAVHSIAVLQNSTPATTAQKLGSVVSKEEVAAVNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLIATITDEVDYTSIEQQVAKRFSKDPSKLQPTPGALKHFRENNWKDMKSLITFYEETMYPIRMKHKEYKYHELTSFHIKDVLKRGLSAFKQSYLDEQREEQTKVKAYMKSCDDFVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVGTASLENISDEVLKLISNRHQTPLDDGVLIRSPDTHPNLQRSPE
+s2:
+...................................................VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPL.........YTSIEQQVAKRFSKDPSKLQPTPG................................................................................VRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVH............................VLIRSPDTHPNLQR...
+> matchmaker #6/L3 to #1.2/L3
+Computing secondary structure
+Parameters
+---
+Chain pairing | bb
+Alignment algorithm | Needleman-Wunsch
+Similarity matrix | BLOSUM-62
+SS fraction | 0.3
+Gap open (HH/SS/other) | 18/18/6
+Gap extend | 1
+SS matrix |  |  | H | S | O
+---|---|---|---
+H | 6 | -9 | -6
+S |  | 6 | -6
+O |  |  | 4
+Iteration cutoff | 2
+Matchmaker copy of combination, chain L3 (#1.2) with chainL3.cif, chain L3
+(#6), sequence alignment score = 562.7
+RMSD between 77 pruned atom pairs is 1.065 angstroms; (across all 157 pairs:
+.079)
+Computing secondary structure
+s1:
+ASKEEQIKKNTKIAIEMIRRYKGETPMSYTRKHTATIEQLEREIEALLGGAQKMRKATTDDQPMDKLGLMERCLRHALWSYHKDEGKYDFDEIARWVVYTPEDEVKLAQMKRQVEAKSKLAAYRAKRAEQGLPEAPVPQISWEEEYKNVTDRELVNEKRLRYDTIAANTMERDEAQIEAVLQQYRKPIQDKRLDDLVDLLERFKPVLAREAIMQRLTIKHLEGQLGVWRYMDWCPEVRDRAELEVDISGFQWWSPLEERRLLPVRLRSVNEVREIMAQTQSSKAAEASAHSPQASQSAGDGDRERLLKEVLALQARIHQRDDAP
+s2:
+.............................VNKVPASL..LEKVCNPRLVAFTAMDLARTRFAP.....LYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVL..IRSPDTHPNLQR.................................................................................................................................
+s1:
+PAEHKGRVGYVSQVIGAVVDVHFSEGVPPVLTALDVTEDLGRDEPLTLEIVQHLDANTGRCIAMQTTDLLKLKSKVVSTGGNISVPVGRETLGRIFNVLGDAIDQRGPVGEKMRMAIHAEAPKLADQAAEDTILTTGIKVIDLILPYCKGGKIGLFGGAGVGKTVIIMELINNVAKGHGGFSVFAGVGERTREGTDLYLEMMQSKVIDLKGDSKCVLVYGQMNEPPGARARVAQSALTMAEYFRDVEGQNVLLFIDNIFRFTQANSEVSALLGRIPAAVGYQPTLAEDLGMLQERITSTTKGSITSVQAVYVPADDITDPAPATTFSHLDATTVLDRAVAESGIYPAVNPLECASRIMDPDVIDVNHYNVAQDIVQMLTKYKELQDIIAVLGIDELSEEDKVVVDRARKVTRFLSQPFQVAEVFTGMTGHYVQLNDTVESFSGLLMGSYDQIPEMAFYMVGGINSVLEKAKAMAEEAAAMEK
+s2:
+....................................................................................................................................................................................................................................................................................................VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQP..TP...GVRTAVKDAFDT...SVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR.........................
+s1:
+FFGKGWDNAALDTIFSSMLRKPEVNDRIRTQYASTMDPRDADVLRRLGEVSKENKTFIRVFLPPHLGDPHRLLKCYSLMAYPILDDKGGQLKVEMDGCKLDAFADPDDDYSKVVIPHIELVEYLAKSLLETMKWEATPRGAASLLESLYRGAEIPDHVFQTPAVIERLEDYKDGNKVIS.......................................................................................................
+s2:
+........................................................................................................................VNKVPASLLEKV...CNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFS..KDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+KATEMIGYVHSIDGTIATLIPAPGNPGVAYNTIIMIQVSPTTFAAGLVFNLEKDGRIGIILMDNITEVQSGQKVMATGKLLYIPVGAGVLGKVVNPLGHEVPVGLQTLGKVDAGAPNIVSRSPVNYNLLTGFKAVDTMIPIGRGQRELIVGDRQTGKTSIAVSTIINQVRNNQQI......LSKNAVISIYVSIGQR.CSNVARIHRLLRSYGALRYTTVMAATAAEPAGLQYLAPYSGVTMGEYFMNRGRHCLCVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAAMLSPGKGGGSVTALPIVETLSNDVTAYIVTNVISITDGQIYLDTKLFTGGQRPAVNIGLSVSRVGSSAQNVAMKAVAGKLKGILAEYRKLAADQVQTVPMIRGARFVALFNQKNPSFFMNALVSLYACLNGYLDDVKVNYAKLYEYLLVNKDLSVMYGTATNKFFYMYVQQLNYVIRFFTLNHPILNAEVEEMLKQHTHLFLQHYQSKMNAIKTEKEIKALKNLLYSCKRAV
+s2:
+.............................................................................................................................................................VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVR.TAVKDA..FDTSVCNDIANILRIG.GETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIE.....YPERGEVHV.LIRSPDTHPNLQR...............................................................................................................................................................................................................
+s1:
+EHKGRVGYVSQVIGAVVDVHFSEGVPPVLTALDVTEDLGRDEPLTLEIVQHLDANTGRCIAMQTTDLLKLKSKVVSTGGNISVPVGRETLGRIFNVLGDAIDQRGPVGEKMRMAIHAEAPKLADQAAEDTILTTGIKVIDLILPYCKGGKIGLFGGAGVGKTVIIMELINNVAKGHGGFSVFAGVGERTREGTDLYLEMMQSKVIDLKGDSKCVLVYGQMNEPPGARARVAQSALTMAEYFRDVEGQN...VLLFIDN..IFRFTQANSEVSALLG.RIPAAVGYQPTLAEDLGMLQERITSTTKGSITSVQAVYVTDPAPATTFSHLDATTVLDRAVAESGIYPAVNPLECASRIMDPDVIDVNHYNVAQDIVQMLTKYKELQDIIAVLGIDELSEEDKVVVDRARKVTRFLSQPFQVAEVFTGMTGHYVQLNDTVESFSGLLMGSYDQIPEMAFYMVGGINSVLEKAKAMAEEAAAMEKQRRAR
+s2:
+...........................................................................................................................................................................................................................VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANIL.RIGGET.HAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFND.GPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR...........................................................................................................
+s1:
+KGRVGYVSQVIGAVVDVHFSEGVPPVLTALDVTEDLGRDEPLTLEIVQHLDANTGRCIAMQTTDLLKLKSKVVSTGGNISVPVGRETLGRIFNVLGDAIDQRGPVGEKMRMAIHAEAPKLADQAAEDTILTTGIKVIDLILPYCKGGKIGLFGGAGVGKTVIIMELINNVAKGHGGFSVFAGVGERTREGTDLYLEMMQSKVIDLKGDSKCVLVYGQMNEPPGARARVAQSALTMAEYFRDVEGQNVLLFIDNIFRFTQANSEVSALLGRIPAAVGYQPTLAEDLGMLQERITSTTKGSITSVQAVYVPADDITDPAPATTFSHLDATTVLDRAVAESGIYPAVNPLECASRIMDPDVIDVNHYNVAQDIVQMLTKYKELQDIIAVLGIDELSEEDKVVVDRARKVTRFLSQPFQVAEVFTGMTGHYVQLNDTVESFSGLLMGSYDQIPEMAFYMVGGINSVLEKAKAMAEEAAAMEENKAAH
+s2:
+................................................................................................................................................................................................................................................................................................VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQP..TP...GVRTAVKDAFDT...SVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR..............................
+s1:
+.............................................................KYDLFGYEV..DTNTAPWIEKVKKCRYYDEAGEVLVSMNVKNCPPDLETYNATLQKIFEAPSKQEKPVENESKFCAMMDLMEEMQHRNKVK.....PNEESWTWVMKECVQSGQFRLGYCVAKLMEAEFKRVPEDLVKQNEANAAKAKADGKEHPSTLAQQQSLFDIKIQ
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVP.....YSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR.....................................................................
+s1:
+.....................................................................................LHFPLSPPPIEIDY.LDSDPLEFAVRTEARRWGFDDLQYMRELAFVRIKENPSIGDFRRM..TPEERRDLFWGSDRQDFFRYITLKLTGHPEHLYHRGW
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR...........................
+s1:
+ASDLKMVSLHKILIGEVQFRNNALLKACNIEHNFGPTWKSEIEAYAKSLPAEEKNCLERQIARVSMTRYTTRELAEYCGEGPEHVDAVAREANIAQAKVYAQKNGADKLETYVKAEAKNA....GWSEAETK....KFMDAVKAAK......................................................
+s2:
+.........................................VNKVPASL..LEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+...........................................................AKKYDLFGYEVDTNTAP..WIEKVKKCRYYDEAGEVLVSMNVKNCPPDLETYNATLQKIFEAPSKQEKPVENESKFCAMMDLMEEMQHRNKVK.....PNEESWTWVMKECVQSGQFRLGYCVAKLMEAEFKRVPEDLVKQNEANAAKAKADGKEHPSTLAQQQSLFDIKIQ
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVP.....YSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR.....................................................................
+s1:
+TEMIGYVHSIDGTIATLIPAPGNPGVAYNTIIMIQVSPTTFAAGLVFNLEKDGRIGIILMDNITEVQSGQKVMATGKLLYIPVGAGVLGKVVNPLGHEVPVGQTLGKVDAGAPNIVSRSPVNYNLLTGFKAVDTMIPIGRGQRELIVGDRQTGKTSIAVSTIINQVRNNQQI......LSKNAVISIYVSIGQR.CSNVARIHRLLRSYGALRYTTVMAATAAEPAGLQYLAPYSGVTMGEYFMNRGRHCLCVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAAMLSPGKGGGSVTALPIVETLSNDVTAYIVTNVISITDGQIYLDTKLFTGGQRPAVNIGLSVSRVGSSAQNVAMKAVAGKLKGILAEYRKLAADVQTVPMIRGARFVALFNQKNPSFFMNALVSLYACLNGYLDDVKVNYAKLYEYLLVNKDLSVMYGTATNKFFYMYVQQLNYVIRFFTLNHPILNAEVEEMLKQHTHLFLQHYQSKMNAIKTEKEIKALKNLLYSCKRAV
+s2:
+..........................................................................................................................................................VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVR.TAVKDA..FDTSVCNDIANILRIG.GETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIE.....YPERGEVHV.LIRSPDTHPNLQR..............................................................................................................................................................................................................
+s1:
+........................................................GAKK..YDLFGYEV..DTNTAPWIEKVKKCRYYDEAGEVLVSMNVKNCPPDLETYNATLQKIFEAPSKQEKPVENESKFCAMMDLMEEMQHRNKVK.....PNEESWTWVMKECVQSGQFRLGYCVAKLMEAEFKRVPEDLVKQNEANAAKAKADGKEHPSTLAQQQSLFDIKIQ
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVP.....YSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR.....................................................................
+s1:
+SIAVIAAGAPAALLQAVSSILSKATGGAVKATQATSAA.SNAVVVGMQAPRGVYACVAEPPSTASGPYAGVKTVVVRAILPRSAPDTMQVRDILDVYPASGIACEKETAEAVKNFTKAAKVAVEKAKAMKATRVTLVMKPATKYERLNGLFRETCTKTIEAAGLSVETSTTAAATNTLIMFPEK..MSVVMVSDDPVCENVQYAYAGAVGGVHTTYYTDSGNKIYGGHSYRSVAMALAEELKSLGMKAEAAKVEAAVQKSPRNAAAAM
+s2:
+............VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQ.PTPGVRTAVKDAF......DTSVCNDIANILRIGG.....ET......HAHAHRMALKILDDMNLMRVP...............YSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPD.THPNLQR.................................................................
+s1:
+ISIQGLHYVGTGLGAIALGGVGMGIGTIFGCLLIACARQP.NLTKMLFNYAILGFALTEAIGLFALMLAFLMLFS..........................................................................................................................
+s2:
+...................................VNKVPASLLEKVCNPRLVAFTAMDLAR.....TRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+ISIQGLHYVGTGLGAIALGGVGMGIGTIFGCLLIACARQP.NLTKMLFNYAILGFALTEAIGLFALMLAFLMLFS..........................................................................................................................
+s2:
+...................................VNKVPASLLEKVCNPRLVAFTAMDLAR.....TRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+ISIQGLHYVGTGLGAIALGGVGMGIGTIFGCLLIACARQP.NLTKMLFNYAILGFALTEAIGLFALMLAFLMLFS..........................................................................................................................
+s2:
+...................................VNKVPASLLEKVCNPRLVAFTAMDLAR.....TRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+ISIQGLHYVGTGLGAIALGGVGMGIGTIFGCLLIACARQPNLTKMLFNYAILGFALTEAIGLFALMLAFLMLFS..........................................................................................................................
+s2:
+..................................VNKVPASLLEKVCNPRLVAFTAMDLAR.....TRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+SIQGLHYVGTGLGAIALGGVGMGIGTIFGCLLIACARQP.NLTKMLFNYAILGFALTEAIGLFALMLAFLMLFS..........................................................................................................................
+s2:
+..................................VNKVPASLLEKVCNPRLVAFTAMDLAR.....TRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+ISIQGLHYVGTGLGAIALGGVGMGIGTIFGCLLIACARQP.NLTKMLFNYAILGFALTEAIGLFALMLAFLMLFS..........................................................................................................................
+s2:
+...................................VNKVPASLLEKVCNPRLVAFTAMDLAR.....TRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+ISIQGLHYVGTGLGAIALGGVGMGIGTIFGCLLIACARQP.NLTKMLFNYAILGFALTEAIGLFALMLAFLMLFS..........................................................................................................................
+s2:
+...................................VNKVPASLLEKVCNPRLVAFTAMDLAR.....TRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+ISIQGLHYVGTGLGAIALGGVGMGIGTIFGCLLIACARQPNLTKMLFNYAILGFALTEAIGLFALMLAFLMLFS..........................................................................................................................
+s2:
+..................................VNKVPASLLEKVCNPRLVAFTAMDLAR.....TRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+ISIQGLHYVGTGLGAIALGGVGMGIGTIFGCLLIACARQP.NLTKMLFNYAILGFALTEAIGLFALMLAFLMLFS..........................................................................................................................
+s2:
+...................................VNKVPASLLEKVCNPRLVAFTAMDLAR.....TRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+ISIQGLHYVGTGLGAIALGGVGMGIGTIFGCLLIACARQPNLTKMLFNYAILGFALTEAIGLFALMLAFLMLFS..........................................................................................................................
+s2:
+..................................VNKVPASLLEKVCNPRLVAFTAMDLAR.....TRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+..........YTPSEELKKLYASDFERAQFP...ANIVPSDSVTFAKFLYKAVEPKGSFDAILKDFQTIAAAIPK..LPIFWERTV........VVSEVNEFK.SLSAPTIFTLEWMQSN.GMLDLLPDVAEVYETYVSAKMKRVTAKIYVAPGKEQDRALVDKARKVAEQVVKDNKQLAGYTLVPKVLVDRSIVEGFAVDVQGTYVNEAVGRKIETEVLRKYLDSLSLYDAEELKSGV
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR..................................................................................
+s1:
+VALNWRDHGISYVKYLNVATEALHMATKDKARAKYSRFSTPNYIALVKKVPAFT.....................................................................................................................................................
+s2:
+..............................................VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+FFKATEMIGYVHSIDGTIATLIPAPGNPGVAYNTIIMIQVSPTTFAAGLVFNLEKDGRIGIILMDNITEVQSGQKVMATGKLLYIPVGAGVLGKVVNPLGHEVPVGLQTLGKVDAGAPNIVSRSPVNYNLLTGFKAVDTMIPIGRGQRELIVGDRQTGKTSIAVSTIINQVRNNQQI......LSKNAVISIYVSIGQR.CSNVARIHRLLRSYGALRYTTVMAATAAEPAGLQYLAPYSGVTMGEYFMNRGRHCLCVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAAMLSPGKGGGSVTALPIVETLSNDVTAYIVTNVISITDGQIYLDTKLFTGGQRPAVNIGLSVSRVGSSAQNVAMKAVAGKLKGILAEYRKLAAQTVPMIRGARFVALFNQKNPSFFMNALVSLYACLNGYLDDVKVNYAKLYEYLLVNKDLSVMYGTATNKFFYMYVQQLNYVIRFFTLNHPILNAEVEEMLKQHTHLFLQHYQSKMNAIKTEKEIKALKNLLYSCKRAVG
+s2:
+...............................................................................................................................................................VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVR.TAVKDA..FDTSVCNDIANILRIG.GETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIE.....YPERGEVHV.LIRSPDTHPNLQR.............................................................................................................................................................................................................
+s1:
+LSLLLCVHFSAIHR..PPPPVPFTALA......AFLYALTLTAPVAEQRS..GSSLHPQIEVGTEIEDMALFHLVVLPLVFFAAMCIGRG.........................................................................
+s2:
+...VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYT.SIEQQVAKRFSKDPSKLQPTPGVRTAVKD..AFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+QMKVELTMQYLDEWMLRWRKFQTESDWQIEKNRQWWRKANIVTAGAVMGGLVMYTAGNATIRRQFGAPHFFDIGVDGKLKEAICDTMTSRWRYTPQGYGRVMLVGLPTFFVFAISEHIQERRRLRAYVRQNTVFGEQARRLVQNGKIEEYLAVDIKASLP.QNQTQLYAG....................................................................
+s2:
+.......................................................................VNKVPASLLEKVCN..PRLVAFTAMDLARTRFAPLYT....SIEQQVAKRFSKDPSKLQPT...PGVRTAVKDA.FDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+.............................................................................................................................................NMFLFKDPVRRPQLSPEERAKVKINYAEWPEEFRDYDPDDPYKNSPEIIEGLSSWNLFLWGVECAFIYQFYEVVFPKS
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR..............................................................
+s1:
+....................NPVDHFRPNLKFLSVYVEHQYVVDKWLHVKENWLKPWYLPWW.TPMYQAM.TWYSQRNRNLMLVENHLNYRPYRYRRNDEDREN....PY...................................................
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLAR..TRFAPLYTSIEQQVAKRFSKDPSKLQP..TPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+VFFSTYRSKRIVAPGFLKGPVMASRAFFDYYFQRAWCGCVQWVIPGEVRLWACGVPVIYFIHRYHNDHSLEPDFVEKAMIQRWGG..SLEEVR.KLSPQDQLRIRAFTDLEKLYSAYGPKD.TIVQP.PGDLLPGKDYYH..........................................................................................
+s2:
+..................................................................VNKVPASLLEKVCNPRLVAFTAMDLARTRFAP.......LYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+GTWSVLKKNCLNFVPGLALFASQSRDAFATWMKIYNRGYKYGPQEFSDQAEAYTPDYWKRGHSQEKNMWVDMKLSEEVSQKELAQLMHYKQDLWRMGHGLGLSLFLGGYALIPAFFCLSSDTFAPSCFCKTEEEKKAWREAQDMYRYRSAPSYIMDTKWHFD.FHAYPWN....ATQERAWDDLFEKNNVRRDPKVLRPAAEMYDGFLKFYQIRRKSLRHLARSMNLPTFPLLSRTCASTRVKDYWNLAWNEDYMVITQKLHHQMSDEDLHDYAWRRFLAPYDKNLSRDEIMTRVNDYHEFLGPKFVEEGKAPNMIILTNYVLGYYNDPAYLVEDISALDGNDFEYMAHYGKDAFLRRLEFENGPLRDQVEAHTQKLIADRAAAAAAEA
+s2:
+.......................................................................................................................VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR.................................................................................................................
+s1:
+HLEPMSVWYLSSWTCVWWYSFFFWLPVLWADMIVPSFVYNKLPVIHFIQEKRAEQKLRRVLDETYTQ................................................................................................................................
+s2:
+......................................VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+...............................................HPPKLEDIP.PSSATKGFFGAYMARLIDIKWMMNRSVELGREYYISAPTLYLFLWMFCWKGFVIMRYGDGKPP.............................................
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCN..DIANIL....RIGGE..THAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+................................................................................................................VGNGPTFHTAGDNNNTSEIQNAFPINERG...IRSSSPFPEPNTAIYDSYMPWTYFQPIDVKVDKMPAPEAKYYQHHTKKPWDVSTTDLIEIQSRKKYVQGVGYFLMMIYLYFLMPKEKSYSGTTGSDGFYVMLPKNQPEKFV
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFND.GPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR.................................................................................................
+s1:
+MFVFFVCDLVIMRILLCFCYSVWSRIIFVLFYNVFYICTELMFCIFDVYLFVGLCMFICLWFVLFNFYGLIVYYCITYLNVYILFCIVFMYYMAFLFCFCFLLDFILFGSLLVGDAFMDVFFLRYLLCVLECFSLLCRCISTFLRMFCNLLSSHFLMLMFCDFVYFFIIFFLFFIMCDFIYFIIFTFAMLFCIIFYLFLYALDMFCALLQIFIFCNMIMQLIMDFLL...LLSFHG.......................................................................................................................................
+s2:
+......................................................................................................................................................................................................................VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+FTVPVALCTKQVAAMDEPLKRHIDAYEARGEDVTIAVWREYVDGQRALLPYRWAKFRNEVTYLTSGQIALTDLAFADLLLFVRFLTKCLFIFIVAVMAGRRSVFPS.LEPTSPFVEEIVKN.WQPNRLRRVAGAEYMARDQAAAAAAAAA................................................................
+s2:
+........................................................VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPT.PGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+........................................................................................................PKTLNQFRNFSYIVVAWLGFNKGFREKAANDAEWIAHQQRVRQQNVERHQAASAMMEA
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVP.....YSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+..........................................................................................VAPKTLN.......QFRNFSYIVVAWLGFNKGFREKAANDAEWIAHQQRVRQQNV............
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+AFHDVSTDAIRQMQASEALQKHLENAQLAHRVCVAKALKADEPPVEK.CALTWGEVVMRYNQWSEYRPAFHDSDAQ..KRYSKYWTKKRQA......................................................................................................
+s2:
+....................................VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+SRVSNKISGGMACQTVVNHGYYLKPMTGNPYLCTQHDGVTTAYQQGFAPKDFNWLYRFRYNLLPQGMSGGFFSRNPYGRYVHWLEVSTIEKMRLQMFTMESVPCSVVSLILLVFTMWHSYRLAFLHPDITLYNLG.LWSTKPWVQQQRFNKKKELDQDVYRWMTRVPEVMMDDPIREMYKM.GITANDPVYAMAKEQGVEHELTMTHAEYTSTSPDIRRVIANARK...................................
+s2:
+..................................................................................................VNKVPASLLEKVC......NPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+..................KLYASDFERAQFPANIVPSDSVTFAKFLYKA...VEP........KGSFD.AILKDFQTIAAAIPKLPIFWERTV..VVSEVNEFK.SLSAPTIFTLEWMQSN.GMLDLLPDVAEVYETYVSAKMKRVTAKIYVAPGKEQDRALVDKARKVAEQVVKDNKQLAGYTLVPKVLVDRSIVEGFAVDVVNEAVG
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRF.APLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR...................................................
+s1:
+SGRLRLYKEKLEGYNRFYSIVKTIKMVTMAKFRQAQVRIKTRDYTL..RYTEKAFSKPGQLVGDSPQAKAIYIPVMTNRGSCGALNSNVVKVIDSVASSRAYLMPLGKRGIESLSKLYPSSFRMGIVNDM.HEPMHFAYATYVWENAQQLCPEADRVHIIFHRCVSAGSQKQCYYNIPAYEKWKEDLVDASSTENQKSRYLFANTLLNEDEQMIRDFYDFHATLAILNAVCENELSEQAARLVAVEGQLSNISTLQQKTSSLYNKTRQSSITSSLIEIISAMTSLEGNAAKGVQRTN
+s2:
+.......VNKVPA..SLLEKVCNPRLVAFTAMDLARTRFAPL.YTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAF.DTSVCN.DIANILR.IGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEY..PERGEVHVLIRSPDTHPNLQR.............................................................................................................................
+s1:
+.....YTELSHMKFP..VYYGAVGVVLGYFVVMWVVFLRMGSKHTARSEFKNDYLRVWRRRLGTGYEWADAWGPEMGTFFKDLPEE.........................................................................
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVC..NDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+..........................................................DMHSSDRFKAA.WDEIP..LHMLGASHKQMFEWYWRAMYQLGL.RDPYRLT...KLRSMLNWAALFSFMYLTYISIFYSSFYHVYMM....DWPEHFKRENAREYALSHGHDVWAGDGKFIRPYFHINPPMLTMTSEDI
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR........................................
+s1:
+..........................................................................TYFYANCGETGISGATMQVLLKLTLACCVVQVFAIRYFVFQRLTTKKQFVEDSTDLWESDGTEMDGEEAVANLRIQHERIMPFMNDIKDKLDAQ
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGE...VHVLIRSPDTHPNLQR........
+s1:
+.................................................................................................TMNFGNMTLGGA....MATFGGQSNPMCNYTSPLAKKFV.YKEVGKVHYPLRRHVFRTKVRTAAEIRFNEIVKRYMKEKMTFKRGCYAATITNTVELDHMGSIIPKDEYEVKRLTSYMTSKKMSSDYKKHMQELWTRVLFVCESTNLVGVTENAMHQNSRPGTDEEFMSIIWYSSFVTTLMAFVVTLFIWWYRYGQAPQYAEF
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDN..SPLLFEMIEYPERGEVHVLIRSPDTHPNLQR.............................................................................................................................................
+s1:
+............................ELPEAFEFIEHKVTDKDIHSAYENMETLRLTVTRQDEFLFKETPVKCVTIVGVNGENGVYPGHAYEI.TQLTPAPLTVEMP.DGTVKKFFTSGGFAHINNEGSCDINCVECIPLAELDLDAAEKALAQQQSALSSAHDEKAKAVIEIRIGVLESVIQSLKHMKE
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAF...DTSV.CNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAF....NDGPFD.N....SPLLFEMIEYPERGEVHVLIRSPDTHPNLQR......................
+s1:
+PLATLKPVLAESVATQNVIRRMIGVTTNRKVNASAINSVAEKTKGEGLAGTTAVVARAHLYLLSRNPTDAVAEIDAVLPKVQDEALRRFAIGIRLRSHNELLDMKEASLGVSGGATESEVSDLRSKLQKDYKELVTSSPGCWLVELAAAEYTLYTGASEEAYKSFSSIEKKIQEYIKAPIHVSELVATADNTNEFSLIGFQVRRARPGVKPEGVSASVAEGMANVMADPAAVKALQQAKKAFEEALELVVTLQEANV....GH...HFHDFFPTTPDHYDKWTSEAARSAQQLIQE.ALTPHSVGLKPEAIDRIRVSMTNKAFYDSEEKLHALLKSAPKDKSIIASIRETFGPGPSTPISSSDQAVADAVESVHLAVVSSDTAGATDYAKRGKEIAKALAKQLLYRTQVQKCVALTEMNCLQEAVDVVTPVIDANEYIYMWRAFLARSRAYKGLGLITNADKDLKELNRLKHSLTERTPYEKK
+s2:
+..............................................................................................................................................................................VNKVPASLLEKVC...NPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSK...DPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIE........YPERGEVHVLIRSPDTHPNLQR..........................................................................................................................................
+s1:
+MFWLCLVCLSVSHKMIGLCYLLVAILSGFVGYVYSLFIRLELSLIGCGILFGDYQFYNVLITSHGLIMVFAFIMPVMMGGLVNYFIPVMAGFPDMVFPRLNNMSFWMYLAGFGCVVNGFLTEEGMGVGWTLYPTLICIDFHSSLACDFVMFAVHLLGISSILNSINLLGTLFCCRRKFFSFLSWSLFIWAALITAILLIITLPVLAGGVTLILCDRNFNTSFYDVVG.....GGDLILFQHIFWFFGHPEVYIILLPVFGLISTIVEVIGFR.CVFSTVAMIYSMILIAILGMFVWAHHMFVVGMDVDSRAYFGGVSILIGLPTCVKLFNWIYSFLYTDMIITFEVYFVIMFIFMFLIGAVTGLFLSNVGIDIMLHDTYFVVGHFHYVLSLGAVVGFFTGFIHFLAKWLPIELYLFWMFYFISTLFIGSNMLFFPMHSLGMYAFPRRISDYPVSFLFWSSFMLYGMLLLASLILFLCALFCVFLFWDYCLFFVSLFVFSLYCFFYFSTWLPCVMVLYLLLVDFAHIVLDYLFLILCFCFVFFIFFWQSLFLFFYI
+s2:
+.....................................................................................................................................................VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPT..PGVRTAVKDA.FDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEV....HVLIRSPDTHPNLQR..................................................................................................................................................................................................................................................
+s1:
+.....................................................................................ASCRTGRLPMPDD......PLFNSTHMHGLRHSSRIAGLGMIAVIWIMYEKLRHSHHYITYKGPENPFARIRHRRFPGGAFMFGWGNNGLNRDCGIKEFECWAGYTGKEYTYV
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR.........................................
+s1:
+..................................................................................................................................VAKISSIERASTYLRFSTLRVHPHHEPNFRARPVGWKAWNSKQYMDPWAPYPLTSPVRHVDRPFSGMWFGMGHFALKNFFGPLNWKFWARVSFFGTLGWAYSLSSYALRMHRNGWEWKNRGAVF
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR.................................................................................................
+s1:
+..............................................................................................................................................KVLIADLPMMWPSDMRRFEKEGGVWGQQFRQRRRQLTFALTISAASTLLGSWYVVMRRRNTYFVLFSTFSGFSVLGFCIGMSLAPLWYENVANNKETSMMRRVWWAKECAKHWD
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRS.PDTHPNLQR..................................................................................................
+s1:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPR.......DGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKE.GRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALY..AEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s2:
+.................................................................................................................................................................................................................................................................................................VNKVPASLLEKVCNPRLVAFTAMDLARTRFAP.LYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMR..VPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLI..RSPDTHPNLQR.........................................................
+s1:
+...........................TPYQDKSYPVQPHNLDELQQPPDSWRKSP.IMSKLMDQ.SLPVYDDV..VTGVGRLYWQEPARVWHLFEADDTLMLEEHDREEWNDRPYVAVNHLYEPPIGSEERPIRVEGTGNP..GDQQIVLCFGNCAPHVPQSNYYMMMKGYNKTKCPMCQQWFYIHNRPWLVMHPDWTDEPAADEGPAYTFSEIEAEFDRDFHEFGVYLNAE
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFN...DGPF..DNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR.......................................................................
+s1:
+.............................................................................AEARAVLQAQSHRTVSAVVPGKMFMRHWIVAEQSTVSVVNRVISGMVAVFTMIWAAGYATLGYNGHNSAHVAGWIFIAYWVVLHTHIMWLAPTML
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMR...VPYSAATTEILQAVAFNDGPFDN.SPLLFEMIEYPERGEVHV.....LIRSPDTHPNLQR......
+s1:
+PGQLANYSSPLYMYSHLIKNSTAKTPQLYTAKDNSKTAMHLLTRRGATANYTVNRWYLKE.KVDSSNRMRLEGLYECVLCASCTGSCPQYWWNREHFLGPAVLLQSYRWLVEPLDRDFDERVRMFETGTLVNMCHNIFNCSITCPKFLNPGLASKEIKRLSSPAAKRVGPAIE..........
+s2:
+................VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILR..IGGETHAHAHRMALKILDDMNLMRV.PYSAATTEILQAVAFNDG....PFDNSPLLFEMIE...YPERGEVHVLIRSPDTHPNLQR
+s1:
+.......................................EDHRKYKVQREELPRMPHFNDFNDPRFCGTTNKQKNGILAYYQWLHCIGNWGEEHSMCKKMRWYVERMMHETWLEKWEEKRALGHFDHTILYGVKPWKEFEPLYQPVKKNRKGAYEYWLDR.DFEPLYDADAADWREKAPILHDMFVLGKKPVA
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILR.......IG..GETHAHAHRMALKILDDMNLM...RVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR........................
+s1:
+...............................................WPSKLPLTKNWYYHLSRRD....SIADETRQYMVVGDFLLLFVVSFSMYRLYVLNRNNTYQTHLSHLINYPPAIIANEFDFKDSNANRLVERKDLDAYREDVVRCRAS........
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPG..VRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFD....NSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+................YGHALELDTHNYKFNGEPPSWMKTHAKTEEETSFAKSVLPHIDFASSYECLLFDADRLNTNLNRKEFGNEIKYRLEKQANTVARAQQLLKDKKAGTGPDAAKIENTLIARIFDEEHVQAEMKYVKCIRANELAEDNRLDILPGGSPNSLREKTRWNLNTELHPADRAEIGARLTAWLPEKYHIVYFDDFQTVAANDATARREMLEIVESVQKEYTAEAKEGGYESDLKETVAELMDDVDPTRAITMEAIKSCKDLQQLEDWSRQVHEYNGDDRIIEIYARAAEITKNAEHQALVKQMREWRKLATK
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRF...APLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGET......HAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR............................................................................................................................................................
+s1:
+...................................................................................................SLSTILYSPIGTSMMIMLAYNVIVICSKHVNYSLEITAKDYVQDQQLLTIMRYGILSCILLGMEVMFIEIG
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFN....DGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR.........
+s1:
+..............PRPFGVWA...PATTLAEYRARIPNPFAYSFKWVYSMKREVFYPPEALAHFKDPQQFKDAVDTVIAMRVSDKIFGEGQKLP...RHPVILMLMVLATHGFIIFSGLKYYYGTYMPANNPTWRKTV...NKEWEEAINNSPWDHMSHVWQYSDEYAAALGDTAAPGQRKFYIPA
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPT...PGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPF..DNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR.........................
+s1:
+.........................PATVKRPLWSLLLPQTYTSRIHTLAFHAPSILFMIAVCAIISKQSYYRSSLADE......DPKTYDRIDRRAYVALPDGRMALVYPIIDTQTSFTRTVISFLDAVNPF.................................
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTS.IEQQVAKRFS....KDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRV.P.YSAATTEILQAVAFND..GPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+IYTTWGSVPCEDWARNESWLKRITSQSDYRSFEFWHVPQADVPAGLRLNAVERYLLSSLENDTDRLLHVSWCEDFDPYWHDRVGSLEMLYKIVYTNDYPLYRYIFGNCMHKVAEKEYMLRKLNYLKSVLFWAGRTERCYTSIVKARYYVQRCVWNALERERYLCACVEAVDSFGKKVPEELRQKVMPELEVALVSMRHWVWDCPNGKRTFTRRLA...................................................................................................................
+s2:
+.............................................................................................................................................................................VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+......SLADKIVRGPPKSVYYTHPRYVMSRDKMLHTIWVDIGIFQTCAYALFPFFSAAYFFK.....................................................................................................
+s2:
+VNKVPASLLEKVCN..PRLVAFTAMDLARTRFAPLYT.....SIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+..............TYMLAFNSKAKARPNFGLRGVGYWTSEVYHKPGQNYWMVVCCAGPFLLVGAIMMDGF.WSKLDDIAG....GGPSALDYGWRSQDRKPWDFSFDIGEGYAAGPAVYRPASGAVDL...................................
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRF....APLYTS.IEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGG.ETHAHAHRMALKILDDMNL.MRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+KAVLQLVRFDPETNSSRVESYEYDKHHEYMVLDLLIAVKAHQDPTLAFRSSCCEGVCGSCAMNINGINSLACITFAQHVTTVAPLPNFPVIKDFVVDLR.HFFQQYAYIRPYVRNANLHRSQVDGIVERYNTVARVLSGVSPSEGRAMEKAQEELRETTVAALLRIADAAVDAGNATQALSVLEKVEQQGVVLDSTRVTEMIERALKNFAAKS................................
+s2:
+.................................................................................VNKVP..ASLLEKVCNPRLVAFTAMDLAR..TRFAPLYTSIEQQVAKRFSKDPSKLQP.TPGVRTAVKDAFDTSVCNDIANILRIG.GETHAHAHRMALKILDDMNLMRVPY.SAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+....YETFTPKTLSGRLVMPGNINL..LTVSPLYCAVLCIAAATWGVFYWDIYCRKNYETVLIARPKDM............................................................................................
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRT....AVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+MFVRVIFVGVSGVFVFLSLPAICIVYLTFCLCGLFCIMFGSFIFIDYCFICFFACLLFCLVCLLCDLFVDSLRGLFDVCCFIRCIQYCFVWFIISELLLFLSLFYVVFSLVLFVSVEFAFVFVIPVMFSCLICDFGFVFYWYFIDIFNLLINTFLLFVSGLFVNFVLFLFWFRFFLCVLFMLWVGILFGFLFLWNQVWEFALLFVTCSCGVFGSILFLIDLLHFSHVFLGIFLLFLCFSRCFNFLCMD...TRFVFLYVVCLYWHFVDCVWFFLLRFVYFDVLSVV........................................................................................................
+s2:
+................................................................................................................................................................................................................................VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLY........TSIEQQVAKRFSK.DPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+MFLGGFVPRRFTQLNRDPWWMFFIFSVGAWIGEYPAMQIKYNARDLVLDPHRYVWSHLDDHH..................................................................................................................................
+s2:
+...................................VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+MGHEETTFSRGNRTRNNALQHIYGLMGLCGVGCVLALFSFVSGQRRIQTTITADGTMTKGTC.PT......................................................................................................
+s2:
+..........VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+MAFILSFWMIFLLDSVIVLLSFVCFVCVWICALLFSTVLLVSKLNNIYCTWDFTASKFIDVYWFTIGGMFSLGLLLRLCLLLYFGHLNFVSFDLCKVVGFQWYWVYFIFGETTIFSNLILESDYMIGDLRLLQCNHVLTLLSLVIYKLWLSAVDVIHSFAISSLGVKVDCIPGRCNEIVLFSSNNATVYGQCSELCGVLHGFMPIVICFI.......................................................................................................................
+s2:
+.......................................................................................................................................................................VNKVPASLLEKV...CNPRLVAFTAMDLARTR..FAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+YTRWKCDRIPVLQLKLFTQEYNIMALVGLLSMVFLFKHASYCSEETERKNGWWAGYPYWRDPIARRNEIRYKQLINSNDVDITDPKWTG..CSKEQ......................................................................................................................
+s2:
+.........................................................VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+..............TYMLAFNSKAKARPNFGLRGVGYWTSEVYHKPGQNYWMVVCCAGPFLLVGAIMMDGF.WSKLDDIAG....GGPSALDYGWRSQDRKPWDFSFDIGEGYAAGPAVYRPASGAVDL...................................
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRF....APLYTS.IEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGG.ETHAHAHRMALKILDDMNL.MRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+.................................................................................................TMNFGNMTLGGA....MATFGGQSNPMCNYTSPLAKKFV.YKEVGKVHYPLRRHVFRTKVRTAAEIRFNEIVKRYMKEKMTFKRGCYAATITNTVELDHMGSIIPKDEYEVKRLTSYMTSKKMSSDYKKHMQELWTRVLFVCESTNLVGVTENAMHQNSRPGTDEEFMSIIWYSSFVTTLMAFVVTLFIWWYRYGQAPQYAEF
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDN..SPLLFEMIEYPERGEVHVLIRSPDTHPNLQR.............................................................................................................................................
+s1:
+................YGHALELDTHNYKFNGEPPSWMKTHAKTEEETSFAKSVLPHIDFASSYECLLFDADRLNTNLNRKEFGNEIKYRLEKQANTVARAQQLLKDKKAGTGPDAAKIENTLIARIFDEEHVQAEMKYVKCIRANELAEDNRLDILPGGSPNSLREKTRWNLNTELHPADRAEIGARLTAWLPEKYHIVYFDDFQTVAANDATARREMLEIVESVQKEYTAEAKEGGYESDLKETVAELMDDVDPTRAITMEAIKSCKDLQQLEDWSRQVHEYNGDDRIIEIYARAAEITKNAEHQALVKQMREWRKLATK
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRF...APLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGET......HAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR............................................................................................................................................................
+s1:
+FFGKGWDNAALDTIFSSMLRKPEVNDRIRTQYASTMDPRDADVLRRLGEVSKENKTFIRVFLPPHLGDPHRLLKCYSLMAYPILDDKGGQLKVEMDGCKLDAFADPDDDYSKVVIPHIELVEYLAKSLLETMKWEATPRGAASLLESLYRGAEIPDHVFQTPAVIERLEDYKDGNKVIS.......................................................................................................
+s2:
+........................................................................................................................VNKVPASLLEKV...CNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFS..KDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+.....................................................................................LHFPLSPPPIEIDY.LDSDPLEFAVRTEARRWGFDDLQYMRELAFVRIKENPSIGDFRRM..TPEERRDLFWGSDRQDFFRYITLKLTGHPEHLYHRGW
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR...........................
+s1:
+...........................TPYQDKSYPVQPHNLDELQQPPDSWRKSPIMSKLMDQSL..PVYDDV..VTGVGRLYWQEPARVWHLFEADDTLMLEEHDREEWNDRPYVAVNHLYEPPIGSEERPIRVEGTGNP..GDQQIVLCFGNCAPHVPQSNYYMMMKGYNKTKCPMCQQWFYIHNRPWLVMHPDWTDEPAADEGPAYTFSEIEAEFDRDFHEFGVYLNAE
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFN...DGPF..DNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR.......................................................................
+s1:
+MFWLCLVCLSVSHKMIGLCYLLVAILSGFVGYVYSLFIRLELSLIGCGILFGDYQFYNVLITSHGLIMVFAFIMPVMMGGLVNYFIPVMAGFPDMVFPRLNNMSFWMYLAGFGCVVNGFLTEEGMGVGWTLYPTLICIDFHSSLACDFVMFAVHLLGISSILNSINLLGTLFCCRRKFFSFLSWSLFIWAALITAILLIITLPVLAGGVTLILCDRNFNTSFYDVVG.....GGDLILFQHIFWFFGHPEVYIILLPVFGLISTIVEVIGFR.CVFSTVAMIYSMILIAILGMFVWAHHMFVVGMDVDSRAYFGGVSILIGLPTCVKLFNWIYSFLYTDMIITFEVYFVIMFIFMFLIGAVTGLFLSNVGIDIMLHDTYFVVGHFHYVLSLGAVVGFFTGFIHFLAKWLPIELYLFWMFYFISTLFIGSNMLFFPMHSLGMYAFPRRISDYPVSFLFWSSFMLYGMLLLASLILFLCALFCVFLFWDYCLFFVSLFVFSLYCFFYFSTWLPCVMVLYLLLVDFAHIVLDYLFLILCFCFVFFIFFWQSLFLFFYI
+s2:
+.....................................................................................................................................................VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPT..PGVRTAVKDA.FDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEV....HVLIRSPDTHPNLQR..................................................................................................................................................................................................................................................
+s1:
+MFVRVIFVGVSGVFVFLSLPAICIVYLTFCLCGLFCIMFGSFIFIDYCFICFFACLLFCLVCLLCDLFVDSLRGLFDVCCFIRCIQYCFVWFIISELLLFLSLFYVVFSLVLFVSVEFAFVFVIPVMFSCLICDFGFVFYWYFIDIFNLLINTFLLFVSGLFVNFVLFLFWFRFFLCVLFMLWVGILFGFLFLWNQVWEFALLFVTCSCGVFGSILFLIDLLHFSHVFLGIFLLFLCFSRCFNFLCMD...TRFVFLYVVCLYWHFVDCVWFFLLRFVYFDVLSVV........................................................................................................
+s2:
+................................................................................................................................................................................................................................VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLY........TSIEQQVAKRFSK.DPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+..................................................................................................................................VAKISSIERASTYLRFSTLRVHPHHEPNFRARPVGWKAWNSKQYMDPWAPYPLTSPVRHVDRPFSGMWFGMGHFALKNFFGPLNWKFWARVSFFGTLGWAYSLSSYALRMHRNGWEWKNRGAVF
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR.................................................................................................
+s1:
+..........................................................DMHSSDRFKAA.WDEIP..LHMLGASHKQMFEWYWRAMYQLGL.RDPYRLT...KLRSMLNWAALFSFMYLTYISIFYSSFYHVYMM....DWPEHFKRENAREYALSHGHDVWAGDGKFIRPYFHINPPMLTMTSEDI
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR........................................
+s1:
+MAFILSFWMIFLLDSVIVLLSFVCFVCVWICALLFSTVLLVSKLNNIYCTWDFTASKFIDVYWFTIGGMFSLGLLLRLCLLLYFGHLNFVSFDLCKVVGFQWYWVYFIFGETTIFSNLILESDYMIGDLRLLQCNHVLTLLSLVIYKLWLSAVDVIHSFAISSLGVKVDCIPGRCNEIVLFSSNNATVYGQCSELCGVLHGFMPIVICFI.......................................................................................................................
+s2:
+.......................................................................................................................................................................VNKVPASLLEKV...CNPRLVAFTAMDLARTR..FAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+SRVSNKISGGMACQTVVNHGYYLKPMTGNPYLCTQHDGVTTAYQQGFAPKDFNWLYRFRYNLLPQGMSGGFFSRNPYGRYVHWLEVSTIEKMRLQMFTMESVPCSVVSLILLVFTMWHSYRLAFLHPDITLYNLG.LWSTKPWVQQQRFNKKKELDQDVYRWMTRVPEVMMDDPIREMYK.MGITANDPVYAMAKEQGVEHELTMTHAEYTSTSPDIRRVIANARK...................................
+s2:
+..................................................................................................VNKVPASLLEKVC......NPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+..........................................................................TYFYANCGETGISGATMQVLLKLTLACCVVQVFAIRYFVFQRLTTKKQFVEDSTDLWESDGTEMDGEEAVANLRIQHERIMPFMNDIKDKLDAQ
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGE...VHVLIRSPDTHPNLQR........
+s1:
+.....................YTELSHMKF.PVYYGAVGVVLGYFVVMWVVFLRMGSKHTA.RSEFKNDYLRVWRRRLGTGYEWADAWGPEMGTFFKDLPEE........................................................
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGE.THAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+.......................................EDHRKYKVQREELPRMPHFNDFNDPRFCGTTNKQKNGILAYYQWLHCIGNWGEEHSMCKKMRWYVERMMHETWLEKWEEKRALGHFDHTILYGVKPWKEFEPLYQPVKKNRKGAYEYWLDR.DFEPLYDADAADWREKAPILHDMFVLGKKPVA
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILR.......IG..GETHAHAHRMALKILDDMNLM...RVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR........................
+s1:
+.....................................................................................ASCRTGRLPMPDD......PLFNSTHMHGLRHSSRIAGLGMIAVIWIMYEKLRHSHHYITYKGPENPFARIRHRRFPGGAFMFGWGNNGLNRDCGIKEFECWAGYTGKEYTYV
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR.........................................
+s1:
+..............PRPFGVWA...PATTLAEYRARIPNPFAYSFKWVYSMKREVFYPPEALAHFKDPQQFKDAVDTVIAMRVSDKIFGEGQKLP...RHPVILMLMVLATHGFIIFSGLKYYYGTYMPANNPTWRKTVNKEWEEAIN...NSPWDHMSHVWQYSDEYAAALGDTAAPGQRKFYIPA
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPT...PGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPF..DNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR.........................
+s1:
+MLRRHAYKTAACVTAIQVARAVHSIAVLQNSTPATTAQKLGSVVSKEEVAAVNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLIATITDEVDYTSIEQQVAKRFSKDPSKLQPTPGALKHFRENNWKDMKSLITFYEETMYPIRMKHKEYKYHELTSFHIKDVLKRGLSAFKQSYLDEQREEQTKVKAYMKSCDDFVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVGTASLENISDEVLKLISNRHQTPLDDGVLIRSPDTHPNLQRSPE
+s2:
+...................................................VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPL.........YTSIEQQVAKRFSKDPSKLQPTPG................................................................................VRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVH............................VLIRSPDTHPNLQR...
+> matchmaker #6/L3 to #1.2/L3
+Computing secondary structure
+Parameters
+---
+Chain pairing | bb
+Alignment algorithm | Needleman-Wunsch
+Similarity matrix | BLOSUM-62
+SS fraction | 0.3
+Gap open (HH/SS/other) | 18/18/6
+Gap extend | 1
+SS matrix |  |  | H | S | O
+---|---|---|---
+H | 6 | -9 | -6
+S |  | 6 | -6
+O |  |  | 4
+Iteration cutoff | 2
+Matchmaker copy of combination, chain L3 (#1.2) with chainL3.cif, chain L3
+(#6), sequence alignment score = 562.7
+RMSD between 77 pruned atom pairs is 1.065 angstroms; (across all 157 pairs:
+.079)
+Computing secondary structure
+s1:
+ASKEEQIKKNTKIAIEMIRRYKGETPMSYTRKHTATIEQLEREIEALLGGAQKMRKATTDDQPMDKLGLMERCLRHALWSYHKDEGKYDFDEIARWVVYTPEDEVKLAQMKRQVEAKSKLAAYRAKRAEQGLPEAPVPQISWEEEYKNVTDRELVNEKRLRYDTIAANTMERDEAQIEAVLQQYRKPIQDKRLDDLVDLLERFKPVLAREAIMQRLTIKHLEGQLGVWRYMDWCPEVRDRAELEVDISGFQWWSPLEERRLLPVRLRSVNEVREIMAQTQSSKAAEASAHSPQASQSAGDGDRERLLKEVLALQARIHQRDDAP
+s2:
+.............................VNKVPASL..LEKVCNPRLVAFTAMDLARTRFAP.....LYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVL..IRSPDTHPNLQR.................................................................................................................................
+s1:
+PAEHKGRVGYVSQVIGAVVDVHFSEGVPPVLTALDVTEDLGRDEPLTLEIVQHLDANTGRCIAMQTTDLLKLKSKVVSTGGNISVPVGRETLGRIFNVLGDAIDQRGPVGEKMRMAIHAEAPKLADQAAEDTILTTGIKVIDLILPYCKGGKIGLFGGAGVGKTVIIMELINNVAKGHGGFSVFAGVGERTREGTDLYLEMMQSKVIDLKGDSKCVLVYGQMNEPPGARARVAQSALTMAEYFRDVEGQNVLLFIDNIFRFTQANSEVSALLGRIPAAVGYQPTLAEDLGMLQERITSTTKGSITSVQAVYVPADDITDPAPATTFSHLDATTVLDRAVAESGIYPAVNPLECASRIMDPDVIDVNHYNVAQDIVQMLTKYKELQDIIAVLGIDELSEEDKVVVDRARKVTRFLSQPFQVAEVFTGMTGHYVQLNDTVESFSGLLMGSYDQIPEMAFYMVGGINSVLEKAKAMAEEAAAMEK
+s2:
+....................................................................................................................................................................................................................................................................................................VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQP..TP...GVRTAVKDAFDT...SVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR.........................
+s1:
+FFGKGWDNAALDTIFSSMLRKPEVNDRIRTQYASTMDPRDADVLRRLGEVSKENKTFIRVFLPPHLGDPHRLLKCYSLMAYPILDDKGGQLKVEMDGCKLDAFADPDDDYSKVVIPHIELVEYLAKSLLETMKWEATPRGAASLLESLYRGAEIPDHVFQTPAVIERLEDYKDGNKVIS.......................................................................................................
+s2:
+........................................................................................................................VNKVPASLLEKV...CNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFS..KDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+KATEMIGYVHSIDGTIATLIPAPGNPGVAYNTIIMIQVSPTTFAAGLVFNLEKDGRIGIILMDNITEVQSGQKVMATGKLLYIPVGAGVLGKVVNPLGHEVPVGLQTLGKVDAGAPNIVSRSPVNYNLLTGFKAVDTMIPIGRGQRELIVGDRQTGKTSIAVSTIINQVRNNQQI......LSKNAVISIYVSIGQR.CSNVARIHRLLRSYGALRYTTVMAATAAEPAGLQYLAPYSGVTMGEYFMNRGRHCLCVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAAMLSPGKGGGSVTALPIVETLSNDVTAYIVTNVISITDGQIYLDTKLFTGGQRPAVNIGLSVSRVGSSAQNVAMKAVAGKLKGILAEYRKLAADQVQTVPMIRGARFVALFNQKNPSFFMNALVSLYACLNGYLDDVKVNYAKLYEYLLVNKDLSVMYGTATNKFFYMYVQQLNYVIRFFTLNHPILNAEVEEMLKQHTHLFLQHYQSKMNAIKTEKEIKALKNLLYSCKRAV
+s2:
+.............................................................................................................................................................VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVR.TAVKDA..FDTSVCNDIANILRIG.GETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIE.....YPERGEVHV.LIRSPDTHPNLQR...............................................................................................................................................................................................................
+s1:
+EHKGRVGYVSQVIGAVVDVHFSEGVPPVLTALDVTEDLGRDEPLTLEIVQHLDANTGRCIAMQTTDLLKLKSKVVSTGGNISVPVGRETLGRIFNVLGDAIDQRGPVGEKMRMAIHAEAPKLADQAAEDTILTTGIKVIDLILPYCKGGKIGLFGGAGVGKTVIIMELINNVAKGHGGFSVFAGVGERTREGTDLYLEMMQSKVIDLKGDSKCVLVYGQMNEPPGARARVAQSALTMAEYFRDVEGQN...VLLFIDN..IFRFTQANSEVSALLG.RIPAAVGYQPTLAEDLGMLQERITSTTKGSITSVQAVYVTDPAPATTFSHLDATTVLDRAVAESGIYPAVNPLECASRIMDPDVIDVNHYNVAQDIVQMLTKYKELQDIIAVLGIDELSEEDKVVVDRARKVTRFLSQPFQVAEVFTGMTGHYVQLNDTVESFSGLLMGSYDQIPEMAFYMVGGINSVLEKAKAMAEEAAAMEKQRRAR
+s2:
+...........................................................................................................................................................................................................................VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANIL.RIGGET.HAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFND.GPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR...........................................................................................................
+s1:
+KGRVGYVSQVIGAVVDVHFSEGVPPVLTALDVTEDLGRDEPLTLEIVQHLDANTGRCIAMQTTDLLKLKSKVVSTGGNISVPVGRETLGRIFNVLGDAIDQRGPVGEKMRMAIHAEAPKLADQAAEDTILTTGIKVIDLILPYCKGGKIGLFGGAGVGKTVIIMELINNVAKGHGGFSVFAGVGERTREGTDLYLEMMQSKVIDLKGDSKCVLVYGQMNEPPGARARVAQSALTMAEYFRDVEGQNVLLFIDNIFRFTQANSEVSALLGRIPAAVGYQPTLAEDLGMLQERITSTTKGSITSVQAVYVPADDITDPAPATTFSHLDATTVLDRAVAESGIYPAVNPLECASRIMDPDVIDVNHYNVAQDIVQMLTKYKELQDIIAVLGIDELSEEDKVVVDRARKVTRFLSQPFQVAEVFTGMTGHYVQLNDTVESFSGLLMGSYDQIPEMAFYMVGGINSVLEKAKAMAEEAAAMEENKAAH
+s2:
+................................................................................................................................................................................................................................................................................................VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQP..TP...GVRTAVKDAFDT...SVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR..............................
+s1:
+.............................................................KYDLFGYEV..DTNTAPWIEKVKKCRYYDEAGEVLVSMNVKNCPPDLETYNATLQKIFEAPSKQEKPVENESKFCAMMDLMEEMQHRNKVK.....PNEESWTWVMKECVQSGQFRLGYCVAKLMEAEFKRVPEDLVKQNEANAAKAKADGKEHPSTLAQQQSLFDIKIQ
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVP.....YSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR.....................................................................
+s1:
+.....................................................................................LHFPLSPPPIEIDY.LDSDPLEFAVRTEARRWGFDDLQYMRELAFVRIKENPSIGDFRRM..TPEERRDLFWGSDRQDFFRYITLKLTGHPEHLYHRGW
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR...........................
+s1:
+ASDLKMVSLHKILIGEVQFRNNALLKACNIEHNFGPTWKSEIEAYAKSLPAEEKNCLERQIARVSMTRYTTRELAEYCGEGPEHVDAVAREANIAQAKVYAQKNGADKLETYVKAEAKNA....GWSEAETK....KFMDAVKAAK......................................................
+s2:
+.........................................VNKVPASL..LEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+...........................................................AKKYDLFGYEVDTNTAP..WIEKVKKCRYYDEAGEVLVSMNVKNCPPDLETYNATLQKIFEAPSKQEKPVENESKFCAMMDLMEEMQHRNKVK.....PNEESWTWVMKECVQSGQFRLGYCVAKLMEAEFKRVPEDLVKQNEANAAKAKADGKEHPSTLAQQQSLFDIKIQ
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVP.....YSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR.....................................................................
+s1:
+TEMIGYVHSIDGTIATLIPAPGNPGVAYNTIIMIQVSPTTFAAGLVFNLEKDGRIGIILMDNITEVQSGQKVMATGKLLYIPVGAGVLGKVVNPLGHEVPVGQTLGKVDAGAPNIVSRSPVNYNLLTGFKAVDTMIPIGRGQRELIVGDRQTGKTSIAVSTIINQVRNNQQI......LSKNAVISIYVSIGQR.CSNVARIHRLLRSYGALRYTTVMAATAAEPAGLQYLAPYSGVTMGEYFMNRGRHCLCVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAAMLSPGKGGGSVTALPIVETLSNDVTAYIVTNVISITDGQIYLDTKLFTGGQRPAVNIGLSVSRVGSSAQNVAMKAVAGKLKGILAEYRKLAADVQTVPMIRGARFVALFNQKNPSFFMNALVSLYACLNGYLDDVKVNYAKLYEYLLVNKDLSVMYGTATNKFFYMYVQQLNYVIRFFTLNHPILNAEVEEMLKQHTHLFLQHYQSKMNAIKTEKEIKALKNLLYSCKRAV
+s2:
+..........................................................................................................................................................VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVR.TAVKDA..FDTSVCNDIANILRIG.GETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIE.....YPERGEVHV.LIRSPDTHPNLQR..............................................................................................................................................................................................................
+s1:
+........................................................GAKK..YDLFGYEV..DTNTAPWIEKVKKCRYYDEAGEVLVSMNVKNCPPDLETYNATLQKIFEAPSKQEKPVENESKFCAMMDLMEEMQHRNKVK.....PNEESWTWVMKECVQSGQFRLGYCVAKLMEAEFKRVPEDLVKQNEANAAKAKADGKEHPSTLAQQQSLFDIKIQ
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVP.....YSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR.....................................................................
+s1:
+SIAVIAAGAPAALLQAVSSILSKATGGAVKATQATSAA.SNAVVVGMQAPRGVYACVAEPPSTASGPYAGVKTVVVRAILPRSAPDTMQVRDILDVYPASGIACEKETAEAVKNFTKAAKVAVEKAKAMKATRVTLVMKPATKYERLNGLFRETCTKTIEAAGLSVETSTTAAATNTLIMFPEK..MSVVMVSDDPVCENVQYAYAGAVGGVHTTYYTDSGNKIYGGHSYRSVAMALAEELKSLGMKAEAAKVEAAVQKSPRNAAAAM
+s2:
+............VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQ.PTPGVRTAVKDAF......DTSVCNDIANILRIGG.....ET......HAHAHRMALKILDDMNLMRVP...............YSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPD.THPNLQR.................................................................
+s1:
+ISIQGLHYVGTGLGAIALGGVGMGIGTIFGCLLIACARQP.NLTKMLFNYAILGFALTEAIGLFALMLAFLMLFS..........................................................................................................................
+s2:
+...................................VNKVPASLLEKVCNPRLVAFTAMDLAR.....TRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+ISIQGLHYVGTGLGAIALGGVGMGIGTIFGCLLIACARQP.NLTKMLFNYAILGFALTEAIGLFALMLAFLMLFS..........................................................................................................................
+s2:
+...................................VNKVPASLLEKVCNPRLVAFTAMDLAR.....TRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+ISIQGLHYVGTGLGAIALGGVGMGIGTIFGCLLIACARQP.NLTKMLFNYAILGFALTEAIGLFALMLAFLMLFS..........................................................................................................................
+s2:
+...................................VNKVPASLLEKVCNPRLVAFTAMDLAR.....TRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+ISIQGLHYVGTGLGAIALGGVGMGIGTIFGCLLIACARQPNLTKMLFNYAILGFALTEAIGLFALMLAFLMLFS..........................................................................................................................
+s2:
+..................................VNKVPASLLEKVCNPRLVAFTAMDLAR.....TRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+SIQGLHYVGTGLGAIALGGVGMGIGTIFGCLLIACARQP.NLTKMLFNYAILGFALTEAIGLFALMLAFLMLFS..........................................................................................................................
+s2:
+..................................VNKVPASLLEKVCNPRLVAFTAMDLAR.....TRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+ISIQGLHYVGTGLGAIALGGVGMGIGTIFGCLLIACARQP.NLTKMLFNYAILGFALTEAIGLFALMLAFLMLFS..........................................................................................................................
+s2:
+...................................VNKVPASLLEKVCNPRLVAFTAMDLAR.....TRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+ISIQGLHYVGTGLGAIALGGVGMGIGTIFGCLLIACARQP.NLTKMLFNYAILGFALTEAIGLFALMLAFLMLFS..........................................................................................................................
+s2:
+...................................VNKVPASLLEKVCNPRLVAFTAMDLAR.....TRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+ISIQGLHYVGTGLGAIALGGVGMGIGTIFGCLLIACARQPNLTKMLFNYAILGFALTEAIGLFALMLAFLMLFS..........................................................................................................................
+s2:
+..................................VNKVPASLLEKVCNPRLVAFTAMDLAR.....TRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+ISIQGLHYVGTGLGAIALGGVGMGIGTIFGCLLIACARQP.NLTKMLFNYAILGFALTEAIGLFALMLAFLMLFS..........................................................................................................................
+s2:
+...................................VNKVPASLLEKVCNPRLVAFTAMDLAR.....TRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+ISIQGLHYVGTGLGAIALGGVGMGIGTIFGCLLIACARQPNLTKMLFNYAILGFALTEAIGLFALMLAFLMLFS..........................................................................................................................
+s2:
+..................................VNKVPASLLEKVCNPRLVAFTAMDLAR.....TRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+..........YTPSEELKKLYASDFERAQFP...ANIVPSDSVTFAKFLYKAVEPKGSFDAILKDFQTIAAAIPK..LPIFWERTV........VVSEVNEFK.SLSAPTIFTLEWMQSN.GMLDLLPDVAEVYETYVSAKMKRVTAKIYVAPGKEQDRALVDKARKVAEQVVKDNKQLAGYTLVPKVLVDRSIVEGFAVDVQGTYVNEAVGRKIETEVLRKYLDSLSLYDAEELKSGV
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR..................................................................................
+s1:
+VALNWRDHGISYVKYLNVATEALHMATKDKARAKYSRFSTPNYIALVKKVPAFT.....................................................................................................................................................
+s2:
+..............................................VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+FFKATEMIGYVHSIDGTIATLIPAPGNPGVAYNTIIMIQVSPTTFAAGLVFNLEKDGRIGIILMDNITEVQSGQKVMATGKLLYIPVGAGVLGKVVNPLGHEVPVGLQTLGKVDAGAPNIVSRSPVNYNLLTGFKAVDTMIPIGRGQRELIVGDRQTGKTSIAVSTIINQVRNNQQI......LSKNAVISIYVSIGQR.CSNVARIHRLLRSYGALRYTTVMAATAAEPAGLQYLAPYSGVTMGEYFMNRGRHCLCVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAAMLSPGKGGGSVTALPIVETLSNDVTAYIVTNVISITDGQIYLDTKLFTGGQRPAVNIGLSVSRVGSSAQNVAMKAVAGKLKGILAEYRKLAAQTVPMIRGARFVALFNQKNPSFFMNALVSLYACLNGYLDDVKVNYAKLYEYLLVNKDLSVMYGTATNKFFYMYVQQLNYVIRFFTLNHPILNAEVEEMLKQHTHLFLQHYQSKMNAIKTEKEIKALKNLLYSCKRAVG
+s2:
+...............................................................................................................................................................VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVR.TAVKDA..FDTSVCNDIANILRIG.GETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIE.....YPERGEVHV.LIRSPDTHPNLQR.............................................................................................................................................................................................................
+s1:
+LSLLLCVHFSAIHR..PPPPVPFTALA......AFLYALTLTAPVAEQRS..GSSLHPQIEVGTEIEDMALFHLVVLPLVFFAAMCIGRG.........................................................................
+s2:
+...VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYT.SIEQQVAKRFSKDPSKLQPTPGVRTAVKD..AFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+QMKVELTMQYLDEWMLRWRKFQTESDWQIEKNRQWWRKANIVTAGAVMGGLVMYTAGNATIRRQFGAPHFFDIGVDGKLKEAICDTMTSRWRYTPQGYGRVMLVGLPTFFVFAISEHIQERRRLRAYVRQNTVFGEQARRLVQNGKIEEYLAVDIKASLP.QNQTQLYAG....................................................................
+s2:
+.......................................................................VNKVPASLLEKVCN..PRLVAFTAMDLARTRFAPLYT....SIEQQVAKRFSKDPSKLQPT...PGVRTAVKDA.FDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+.............................................................................................................................................NMFLFKDPVRRPQLSPEERAKVKINYAEWPEEFRDYDPDDPYKNSPEIIEGLSSWNLFLWGVECAFIYQFYEVVFPKS
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR..............................................................
+s1:
+....................NPVDHFRPNLKFLSVYVEHQYVVDKWLHVKENWLKPWYLPWW.TPMYQAM.TWYSQRNRNLMLVENHLNYRPYRYRRNDEDREN....PY...................................................
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLAR..TRFAPLYTSIEQQVAKRFSKDPSKLQP..TPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+VFFSTYRSKRIVAPGFLKGPVMASRAFFDYYFQRAWCGCVQWVIPGEVRLWACGVPVIYFIHRYHNDHSLEPDFVEKAMIQRWGG..SLEEVR.KLSPQDQLRIRAFTDLEKLYSAYGPKD.TIVQP.PGDLLPGKDYYH..........................................................................................
+s2:
+..................................................................VNKVPASLLEKVCNPRLVAFTAMDLARTRFAP.......LYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+GTWSVLKKNCLNFVPGLALFASQSRDAFATWMKIYNRGYKYGPQEFSDQAEAYTPDYWKRGHSQEKNMWVDMKLSEEVSQKELAQLMHYKQDLWRMGHGLGLSLFLGGYALIPAFFCLSSDTFAPSCFCKTEEEKKAWREAQDMYRYRSAPSYIMDTKWHFD.FHAYPWN....ATQERAWDDLFEKNNVRRDPKVLRPAAEMYDGFLKFYQIRRKSLRHLARSMNLPTFPLLSRTCASTRVKDYWNLAWNEDYMVITQKLHHQMSDEDLHDYAWRRFLAPYDKNLSRDEIMTRVNDYHEFLGPKFVEEGKAPNMIILTNYVLGYYNDPAYLVEDISALDGNDFEYMAHYGKDAFLRRLEFENGPLRDQVEAHTQKLIADRAAAAAAEA
+s2:
+.......................................................................................................................VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR.................................................................................................................
+s1:
+HLEPMSVWYLSSWTCVWWYSFFFWLPVLWADMIVPSFVYNKLPVIHFIQEKRAEQKLRRVLDETYTQ................................................................................................................................
+s2:
+......................................VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+...............................................HPPKLEDIP.PSSATKGFFGAYMARLIDIKWMMNRSVELGREYYISAPTLYLFLWMFCWKGFVIMRYGDGKPP.............................................
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCN..DIANIL....RIGGE..THAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+................................................................................................................VGNGPTFHTAGDNNNTSEIQNAFPINERG...IRSSSPFPEPNTAIYDSYMPWTYFQPIDVKVDKMPAPEAKYYQHHTKKPWDVSTTDLIEIQSRKKYVQGVGYFLMMIYLYFLMPKEKSYSGTTGSDGFYVMLPKNQPEKFV
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFND.GPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR.................................................................................................
+s1:
+MFVFFVCDLVIMRILLCFCYSVWSRIIFVLFYNVFYICTELMFCIFDVYLFVGLCMFICLWFVLFNFYGLIVYYCITYLNVYILFCIVFMYYMAFLFCFCFLLDFILFGSLLVGDAFMDVFFLRYLLCVLECFSLLCRCISTFLRMFCNLLSSHFLMLMFCDFVYFFIIFFLFFIMCDFIYFIIFTFAMLFCIIFYLFLYALDMFCALLQIFIFCNMIMQLIMDFLL...LLSFHG.......................................................................................................................................
+s2:
+......................................................................................................................................................................................................................VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+FTVPVALCTKQVAAMDEPLKRHIDAYEARGEDVTIAVWREYVDGQRALLPYRWAKFRNEVTYLTSGQIALTDLAFADLLLFVRFLTKCLFIFIVAVMAGRRSVFPS.LEPTSPFVEEIVKN.WQPNRLRRVAGAEYMARDQAAAAAAAAA................................................................
+s2:
+........................................................VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPT.PGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+........................................................................................................PKTLNQFRNFSYIVVAWLGFNKGFREKAANDAEWIAHQQRVRQQNVERHQAASAMMEA
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVP.....YSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+..........................................................................................VAPKTLN.......QFRNFSYIVVAWLGFNKGFREKAANDAEWIAHQQRVRQQNV............
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+AFHDVSTDAIRQMQASEALQKHLENAQLAHRVCVAKALKADEPPVEK.CALTWGEVVMRYNQWSEYRPAFHDSDAQ..KRYSKYWTKKRQA......................................................................................................
+s2:
+....................................VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+SRVSNKISGGMACQTVVNHGYYLKPMTGNPYLCTQHDGVTTAYQQGFAPKDFNWLYRFRYNLLPQGMSGGFFSRNPYGRYVHWLEVSTIEKMRLQMFTMESVPCSVVSLILLVFTMWHSYRLAFLHPDITLYNLG.LWSTKPWVQQQRFNKKKELDQDVYRWMTRVPEVMMDDPIREMYKM.GITANDPVYAMAKEQGVEHELTMTHAEYTSTSPDIRRVIANARK...................................
+s2:
+..................................................................................................VNKVPASLLEKVC......NPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+..................KLYASDFERAQFPANIVPSDSVTFAKFLYKA...VEP........KGSFD.AILKDFQTIAAAIPKLPIFWERTV..VVSEVNEFK.SLSAPTIFTLEWMQSN.GMLDLLPDVAEVYETYVSAKMKRVTAKIYVAPGKEQDRALVDKARKVAEQVVKDNKQLAGYTLVPKVLVDRSIVEGFAVDVVNEAVG
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRF.APLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR...................................................
+s1:
+SGRLRLYKEKLEGYNRFYSIVKTIKMVTMAKFRQAQVRIKTRDYTL..RYTEKAFSKPGQLVGDSPQAKAIYIPVMTNRGSCGALNSNVVKVIDSVASSRAYLMPLGKRGIESLSKLYPSSFRMGIVNDM.HEPMHFAYATYVWENAQQLCPEADRVHIIFHRCVSAGSQKQCYYNIPAYEKWKEDLVDASSTENQKSRYLFANTLLNEDEQMIRDFYDFHATLAILNAVCENELSEQAARLVAVEGQLSNISTLQQKTSSLYNKTRQSSITSSLIEIISAMTSLEGNAAKGVQRTN
+s2:
+.......VNKVPA..SLLEKVCNPRLVAFTAMDLARTRFAPL.YTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAF.DTSVCN.DIANILR.IGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEY..PERGEVHVLIRSPDTHPNLQR.............................................................................................................................
+s1:
+.....YTELSHMKFP..VYYGAVGVVLGYFVVMWVVFLRMGSKHTARSEFKNDYLRVWRRRLGTGYEWADAWGPEMGTFFKDLPEE.........................................................................
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVC..NDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+..........................................................DMHSSDRFKAA.WDEIP..LHMLGASHKQMFEWYWRAMYQLGL.RDPYRLT...KLRSMLNWAALFSFMYLTYISIFYSSFYHVYMM....DWPEHFKRENAREYALSHGHDVWAGDGKFIRPYFHINPPMLTMTSEDI
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR........................................
+s1:
+..........................................................................TYFYANCGETGISGATMQVLLKLTLACCVVQVFAIRYFVFQRLTTKKQFVEDSTDLWESDGTEMDGEEAVANLRIQHERIMPFMNDIKDKLDAQ
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGE...VHVLIRSPDTHPNLQR........
+s1:
+.................................................................................................TMNFGNMTLGGA....MATFGGQSNPMCNYTSPLAKKFV.YKEVGKVHYPLRRHVFRTKVRTAAEIRFNEIVKRYMKEKMTFKRGCYAATITNTVELDHMGSIIPKDEYEVKRLTSYMTSKKMSSDYKKHMQELWTRVLFVCESTNLVGVTENAMHQNSRPGTDEEFMSIIWYSSFVTTLMAFVVTLFIWWYRYGQAPQYAEF
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDN..SPLLFEMIEYPERGEVHVLIRSPDTHPNLQR.............................................................................................................................................
+s1:
+............................ELPEAFEFIEHKVTDKDIHSAYENMETLRLTVTRQDEFLFKETPVKCVTIVGVNGENGVYPGHAYEI.TQLTPAPLTVEMP.DGTVKKFFTSGGFAHINNEGSCDINCVECIPLAELDLDAAEKALAQQQSALSSAHDEKAKAVIEIRIGVLESVIQSLKHMKE
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAF...DTSV.CNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAF....NDGPFD.N....SPLLFEMIEYPERGEVHVLIRSPDTHPNLQR......................
+s1:
+PLATLKPVLAESVATQNVIRRMIGVTTNRKVNASAINSVAEKTKGEGLAGTTAVVARAHLYLLSRNPTDAVAEIDAVLPKVQDEALRRFAIGIRLRSHNELLDMKEASLGVSGGATESEVSDLRSKLQKDYKELVTSSPGCWLVELAAAEYTLYTGASEEAYKSFSSIEKKIQEYIKAPIHVSELVATADNTNEFSLIGFQVRRARPGVKPEGVSASVAEGMANVMADPAAVKALQQAKKAFEEALELVVTLQEANV....GH...HFHDFFPTTPDHYDKWTSEAARSAQQLIQE.ALTPHSVGLKPEAIDRIRVSMTNKAFYDSEEKLHALLKSAPKDKSIIASIRETFGPGPSTPISSSDQAVADAVESVHLAVVSSDTAGATDYAKRGKEIAKALAKQLLYRTQVQKCVALTEMNCLQEAVDVVTPVIDANEYIYMWRAFLARSRAYKGLGLITNADKDLKELNRLKHSLTERTPYEKK
+s2:
+..............................................................................................................................................................................VNKVPASLLEKVC...NPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSK...DPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIE........YPERGEVHVLIRSPDTHPNLQR..........................................................................................................................................
+s1:
+MFWLCLVCLSVSHKMIGLCYLLVAILSGFVGYVYSLFIRLELSLIGCGILFGDYQFYNVLITSHGLIMVFAFIMPVMMGGLVNYFIPVMAGFPDMVFPRLNNMSFWMYLAGFGCVVNGFLTEEGMGVGWTLYPTLICIDFHSSLACDFVMFAVHLLGISSILNSINLLGTLFCCRRKFFSFLSWSLFIWAALITAILLIITLPVLAGGVTLILCDRNFNTSFYDVVG.....GGDLILFQHIFWFFGHPEVYIILLPVFGLISTIVEVIGFR.CVFSTVAMIYSMILIAILGMFVWAHHMFVVGMDVDSRAYFGGVSILIGLPTCVKLFNWIYSFLYTDMIITFEVYFVIMFIFMFLIGAVTGLFLSNVGIDIMLHDTYFVVGHFHYVLSLGAVVGFFTGFIHFLAKWLPIELYLFWMFYFISTLFIGSNMLFFPMHSLGMYAFPRRISDYPVSFLFWSSFMLYGMLLLASLILFLCALFCVFLFWDYCLFFVSLFVFSLYCFFYFSTWLPCVMVLYLLLVDFAHIVLDYLFLILCFCFVFFIFFWQSLFLFFYI
+s2:
+.....................................................................................................................................................VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPT..PGVRTAVKDA.FDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEV....HVLIRSPDTHPNLQR..................................................................................................................................................................................................................................................
+s1:
+.....................................................................................ASCRTGRLPMPDD......PLFNSTHMHGLRHSSRIAGLGMIAVIWIMYEKLRHSHHYITYKGPENPFARIRHRRFPGGAFMFGWGNNGLNRDCGIKEFECWAGYTGKEYTYV
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR.........................................
+s1:
+..................................................................................................................................VAKISSIERASTYLRFSTLRVHPHHEPNFRARPVGWKAWNSKQYMDPWAPYPLTSPVRHVDRPFSGMWFGMGHFALKNFFGPLNWKFWARVSFFGTLGWAYSLSSYALRMHRNGWEWKNRGAVF
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR.................................................................................................
+s1:
+..............................................................................................................................................KVLIADLPMMWPSDMRRFEKEGGVWGQQFRQRRRQLTFALTISAASTLLGSWYVVMRRRNTYFVLFSTFSGFSVLGFCIGMSLAPLWYENVANNKETSMMRRVWWAKECAKHWD
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRS.PDTHPNLQR..................................................................................................
+s1:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPR.......DGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKE.GRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALY..AEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s2:
+.................................................................................................................................................................................................................................................................................................VNKVPASLLEKVCNPRLVAFTAMDLARTRFAP.LYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMR..VPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLI..RSPDTHPNLQR.........................................................
+s1:
+...........................TPYQDKSYPVQPHNLDELQQPPDSWRKSP.IMSKLMDQ.SLPVYDDV..VTGVGRLYWQEPARVWHLFEADDTLMLEEHDREEWNDRPYVAVNHLYEPPIGSEERPIRVEGTGNP..GDQQIVLCFGNCAPHVPQSNYYMMMKGYNKTKCPMCQQWFYIHNRPWLVMHPDWTDEPAADEGPAYTFSEIEAEFDRDFHEFGVYLNAE
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFN...DGPF..DNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR.......................................................................
+s1:
+.............................................................................AEARAVLQAQSHRTVSAVVPGKMFMRHWIVAEQSTVSVVNRVISGMVAVFTMIWAAGYATLGYNGHNSAHVAGWIFIAYWVVLHTHIMWLAPTML
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMR...VPYSAATTEILQAVAFNDGPFDN.SPLLFEMIEYPERGEVHV.....LIRSPDTHPNLQR......
+s1:
+PGQLANYSSPLYMYSHLIKNSTAKTPQLYTAKDNSKTAMHLLTRRGATANYTVNRWYLKE.KVDSSNRMRLEGLYECVLCASCTGSCPQYWWNREHFLGPAVLLQSYRWLVEPLDRDFDERVRMFETGTLVNMCHNIFNCSITCPKFLNPGLASKEIKRLSSPAAKRVGPAIE..........
+s2:
+................VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILR..IGGETHAHAHRMALKILDDMNLMRV.PYSAATTEILQAVAFNDG....PFDNSPLLFEMIE...YPERGEVHVLIRSPDTHPNLQR
+s1:
+.......................................EDHRKYKVQREELPRMPHFNDFNDPRFCGTTNKQKNGILAYYQWLHCIGNWGEEHSMCKKMRWYVERMMHETWLEKWEEKRALGHFDHTILYGVKPWKEFEPLYQPVKKNRKGAYEYWLDR.DFEPLYDADAADWREKAPILHDMFVLGKKPVA
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILR.......IG..GETHAHAHRMALKILDDMNLM...RVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR........................
+s1:
+...............................................WPSKLPLTKNWYYHLSRRD....SIADETRQYMVVGDFLLLFVVSFSMYRLYVLNRNNTYQTHLSHLINYPPAIIANEFDFKDSNANRLVERKDLDAYREDVVRCRAS........
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPG..VRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFD....NSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+................YGHALELDTHNYKFNGEPPSWMKTHAKTEEETSFAKSVLPHIDFASSYECLLFDADRLNTNLNRKEFGNEIKYRLEKQANTVARAQQLLKDKKAGTGPDAAKIENTLIARIFDEEHVQAEMKYVKCIRANELAEDNRLDILPGGSPNSLREKTRWNLNTELHPADRAEIGARLTAWLPEKYHIVYFDDFQTVAANDATARREMLEIVESVQKEYTAEAKEGGYESDLKETVAELMDDVDPTRAITMEAIKSCKDLQQLEDWSRQVHEYNGDDRIIEIYARAAEITKNAEHQALVKQMREWRKLATK
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRF...APLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGET......HAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR............................................................................................................................................................
+s1:
+...................................................................................................SLSTILYSPIGTSMMIMLAYNVIVICSKHVNYSLEITAKDYVQDQQLLTIMRYGILSCILLGMEVMFIEIG
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFN....DGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR.........
+s1:
+..............PRPFGVWA...PATTLAEYRARIPNPFAYSFKWVYSMKREVFYPPEALAHFKDPQQFKDAVDTVIAMRVSDKIFGEGQKLP...RHPVILMLMVLATHGFIIFSGLKYYYGTYMPANNPTWRKTV...NKEWEEAINNSPWDHMSHVWQYSDEYAAALGDTAAPGQRKFYIPA
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPT...PGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPF..DNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR.........................
+s1:
+.........................PATVKRPLWSLLLPQTYTSRIHTLAFHAPSILFMIAVCAIISKQSYYRSSLADE......DPKTYDRIDRRAYVALPDGRMALVYPIIDTQTSFTRTVISFLDAVNPF.................................
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTS.IEQQVAKRFS....KDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRV.P.YSAATTEILQAVAFND..GPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+IYTTWGSVPCEDWARNESWLKRITSQSDYRSFEFWHVPQADVPAGLRLNAVERYLLSSLENDTDRLLHVSWCEDFDPYWHDRVGSLEMLYKIVYTNDYPLYRYIFGNCMHKVAEKEYMLRKLNYLKSVLFWAGRTERCYTSIVKARYYVQRCVWNALERERYLCACVEAVDSFGKKVPEELRQKVMPELEVALVSMRHWVWDCPNGKRTFTRRLA...................................................................................................................
+s2:
+.............................................................................................................................................................................VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+......SLADKIVRGPPKSVYYTHPRYVMSRDKMLHTIWVDIGIFQTCAYALFPFFSAAYFFK.....................................................................................................
+s2:
+VNKVPASLLEKVCN..PRLVAFTAMDLARTRFAPLYT.....SIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+..............TYMLAFNSKAKARPNFGLRGVGYWTSEVYHKPGQNYWMVVCCAGPFLLVGAIMMDGF.WSKLDDIAG....GGPSALDYGWRSQDRKPWDFSFDIGEGYAAGPAVYRPASGAVDL...................................
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRF....APLYTS.IEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGG.ETHAHAHRMALKILDDMNL.MRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+KAVLQLVRFDPETNSSRVESYEYDKHHEYMVLDLLIAVKAHQDPTLAFRSSCCEGVCGSCAMNINGINSLACITFAQHVTTVAPLPNFPVIKDFVVDLR.HFFQQYAYIRPYVRNANLHRSQVDGIVERYNTVARVLSGVSPSEGRAMEKAQEELRETTVAALLRIADAAVDAGNATQALSVLEKVEQQGVVLDSTRVTEMIERALKNFAAKS................................
+s2:
+.................................................................................VNKVP..ASLLEKVCNPRLVAFTAMDLAR..TRFAPLYTSIEQQVAKRFSKDPSKLQP.TPGVRTAVKDAFDTSVCNDIANILRIG.GETHAHAHRMALKILDDMNLMRVPY.SAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+....YETFTPKTLSGRLVMPGNINL..LTVSPLYCAVLCIAAATWGVFYWDIYCRKNYETVLIARPKDM............................................................................................
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRT....AVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+MFVRVIFVGVSGVFVFLSLPAICIVYLTFCLCGLFCIMFGSFIFIDYCFICFFACLLFCLVCLLCDLFVDSLRGLFDVCCFIRCIQYCFVWFIISELLLFLSLFYVVFSLVLFVSVEFAFVFVIPVMFSCLICDFGFVFYWYFIDIFNLLINTFLLFVSGLFVNFVLFLFWFRFFLCVLFMLWVGILFGFLFLWNQVWEFALLFVTCSCGVFGSILFLIDLLHFSHVFLGIFLLFLCFSRCFNFLCMD...TRFVFLYVVCLYWHFVDCVWFFLLRFVYFDVLSVV........................................................................................................
+s2:
+................................................................................................................................................................................................................................VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLY........TSIEQQVAKRFSK.DPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+MFLGGFVPRRFTQLNRDPWWMFFIFSVGAWIGEYPAMQIKYNARDLVLDPHRYVWSHLDDHH..................................................................................................................................
+s2:
+...................................VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+MGHEETTFSRGNRTRNNALQHIYGLMGLCGVGCVLALFSFVSGQRRIQTTITADGTMTKGTC.PT......................................................................................................
+s2:
+..........VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+MAFILSFWMIFLLDSVIVLLSFVCFVCVWICALLFSTVLLVSKLNNIYCTWDFTASKFIDVYWFTIGGMFSLGLLLRLCLLLYFGHLNFVSFDLCKVVGFQWYWVYFIFGETTIFSNLILESDYMIGDLRLLQCNHVLTLLSLVIYKLWLSAVDVIHSFAISSLGVKVDCIPGRCNEIVLFSSNNATVYGQCSELCGVLHGFMPIVICFI.......................................................................................................................
+s2:
+.......................................................................................................................................................................VNKVPASLLEKV...CNPRLVAFTAMDLARTR..FAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+YTRWKCDRIPVLQLKLFTQEYNIMALVGLLSMVFLFKHASYCSEETERKNGWWAGYPYWRDPIARRNEIRYKQLINSNDVDITDPKWTG..CSKEQ......................................................................................................................
+s2:
+.........................................................VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+..............TYMLAFNSKAKARPNFGLRGVGYWTSEVYHKPGQNYWMVVCCAGPFLLVGAIMMDGF.WSKLDDIAG....GGPSALDYGWRSQDRKPWDFSFDIGEGYAAGPAVYRPASGAVDL...................................
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRF....APLYTS.IEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGG.ETHAHAHRMALKILDDMNL.MRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+.................................................................................................TMNFGNMTLGGA....MATFGGQSNPMCNYTSPLAKKFV.YKEVGKVHYPLRRHVFRTKVRTAAEIRFNEIVKRYMKEKMTFKRGCYAATITNTVELDHMGSIIPKDEYEVKRLTSYMTSKKMSSDYKKHMQELWTRVLFVCESTNLVGVTENAMHQNSRPGTDEEFMSIIWYSSFVTTLMAFVVTLFIWWYRYGQAPQYAEF
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDN..SPLLFEMIEYPERGEVHVLIRSPDTHPNLQR.............................................................................................................................................
+s1:
+................YGHALELDTHNYKFNGEPPSWMKTHAKTEEETSFAKSVLPHIDFASSYECLLFDADRLNTNLNRKEFGNEIKYRLEKQANTVARAQQLLKDKKAGTGPDAAKIENTLIARIFDEEHVQAEMKYVKCIRANELAEDNRLDILPGGSPNSLREKTRWNLNTELHPADRAEIGARLTAWLPEKYHIVYFDDFQTVAANDATARREMLEIVESVQKEYTAEAKEGGYESDLKETVAELMDDVDPTRAITMEAIKSCKDLQQLEDWSRQVHEYNGDDRIIEIYARAAEITKNAEHQALVKQMREWRKLATK
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRF...APLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGET......HAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR............................................................................................................................................................
+s1:
+FFGKGWDNAALDTIFSSMLRKPEVNDRIRTQYASTMDPRDADVLRRLGEVSKENKTFIRVFLPPHLGDPHRLLKCYSLMAYPILDDKGGQLKVEMDGCKLDAFADPDDDYSKVVIPHIELVEYLAKSLLETMKWEATPRGAASLLESLYRGAEIPDHVFQTPAVIERLEDYKDGNKVIS.......................................................................................................
+s2:
+........................................................................................................................VNKVPASLLEKV...CNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFS..KDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+.....................................................................................LHFPLSPPPIEIDY.LDSDPLEFAVRTEARRWGFDDLQYMRELAFVRIKENPSIGDFRRM..TPEERRDLFWGSDRQDFFRYITLKLTGHPEHLYHRGW
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR...........................
+s1:
+...........................TPYQDKSYPVQPHNLDELQQPPDSWRKSPIMSKLMDQSL..PVYDDV..VTGVGRLYWQEPARVWHLFEADDTLMLEEHDREEWNDRPYVAVNHLYEPPIGSEERPIRVEGTGNP..GDQQIVLCFGNCAPHVPQSNYYMMMKGYNKTKCPMCQQWFYIHNRPWLVMHPDWTDEPAADEGPAYTFSEIEAEFDRDFHEFGVYLNAE
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFN...DGPF..DNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR.......................................................................
+s1:
+MFWLCLVCLSVSHKMIGLCYLLVAILSGFVGYVYSLFIRLELSLIGCGILFGDYQFYNVLITSHGLIMVFAFIMPVMMGGLVNYFIPVMAGFPDMVFPRLNNMSFWMYLAGFGCVVNGFLTEEGMGVGWTLYPTLICIDFHSSLACDFVMFAVHLLGISSILNSINLLGTLFCCRRKFFSFLSWSLFIWAALITAILLIITLPVLAGGVTLILCDRNFNTSFYDVVG.....GGDLILFQHIFWFFGHPEVYIILLPVFGLISTIVEVIGFR.CVFSTVAMIYSMILIAILGMFVWAHHMFVVGMDVDSRAYFGGVSILIGLPTCVKLFNWIYSFLYTDMIITFEVYFVIMFIFMFLIGAVTGLFLSNVGIDIMLHDTYFVVGHFHYVLSLGAVVGFFTGFIHFLAKWLPIELYLFWMFYFISTLFIGSNMLFFPMHSLGMYAFPRRISDYPVSFLFWSSFMLYGMLLLASLILFLCALFCVFLFWDYCLFFVSLFVFSLYCFFYFSTWLPCVMVLYLLLVDFAHIVLDYLFLILCFCFVFFIFFWQSLFLFFYI
+s2:
+.....................................................................................................................................................VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPT..PGVRTAVKDA.FDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEV....HVLIRSPDTHPNLQR..................................................................................................................................................................................................................................................
+s1:
+MFVRVIFVGVSGVFVFLSLPAICIVYLTFCLCGLFCIMFGSFIFIDYCFICFFACLLFCLVCLLCDLFVDSLRGLFDVCCFIRCIQYCFVWFIISELLLFLSLFYVVFSLVLFVSVEFAFVFVIPVMFSCLICDFGFVFYWYFIDIFNLLINTFLLFVSGLFVNFVLFLFWFRFFLCVLFMLWVGILFGFLFLWNQVWEFALLFVTCSCGVFGSILFLIDLLHFSHVFLGIFLLFLCFSRCFNFLCMD...TRFVFLYVVCLYWHFVDCVWFFLLRFVYFDVLSVV........................................................................................................
+s2:
+................................................................................................................................................................................................................................VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLY........TSIEQQVAKRFSK.DPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+..................................................................................................................................VAKISSIERASTYLRFSTLRVHPHHEPNFRARPVGWKAWNSKQYMDPWAPYPLTSPVRHVDRPFSGMWFGMGHFALKNFFGPLNWKFWARVSFFGTLGWAYSLSSYALRMHRNGWEWKNRGAVF
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR.................................................................................................
+s1:
+..........................................................DMHSSDRFKAA.WDEIP..LHMLGASHKQMFEWYWRAMYQLGL.RDPYRLT...KLRSMLNWAALFSFMYLTYISIFYSSFYHVYMM....DWPEHFKRENAREYALSHGHDVWAGDGKFIRPYFHINPPMLTMTSEDI
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR........................................
+s1:
+MAFILSFWMIFLLDSVIVLLSFVCFVCVWICALLFSTVLLVSKLNNIYCTWDFTASKFIDVYWFTIGGMFSLGLLLRLCLLLYFGHLNFVSFDLCKVVGFQWYWVYFIFGETTIFSNLILESDYMIGDLRLLQCNHVLTLLSLVIYKLWLSAVDVIHSFAISSLGVKVDCIPGRCNEIVLFSSNNATVYGQCSELCGVLHGFMPIVICFI.......................................................................................................................
+s2:
+.......................................................................................................................................................................VNKVPASLLEKV...CNPRLVAFTAMDLARTR..FAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+SRVSNKISGGMACQTVVNHGYYLKPMTGNPYLCTQHDGVTTAYQQGFAPKDFNWLYRFRYNLLPQGMSGGFFSRNPYGRYVHWLEVSTIEKMRLQMFTMESVPCSVVSLILLVFTMWHSYRLAFLHPDITLYNLG.LWSTKPWVQQQRFNKKKELDQDVYRWMTRVPEVMMDDPIREMYK.MGITANDPVYAMAKEQGVEHELTMTHAEYTSTSPDIRRVIANARK...................................
+s2:
+..................................................................................................VNKVPASLLEKVC......NPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+..........................................................................TYFYANCGETGISGATMQVLLKLTLACCVVQVFAIRYFVFQRLTTKKQFVEDSTDLWESDGTEMDGEEAVANLRIQHERIMPFMNDIKDKLDAQ
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGE...VHVLIRSPDTHPNLQR........
+s1:
+.....................YTELSHMKF.PVYYGAVGVVLGYFVVMWVVFLRMGSKHTA.RSEFKNDYLRVWRRRLGTGYEWADAWGPEMGTFFKDLPEE........................................................
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGE.THAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR
+s1:
+.......................................EDHRKYKVQREELPRMPHFNDFNDPRFCGTTNKQKNGILAYYQWLHCIGNWGEEHSMCKKMRWYVERMMHETWLEKWEEKRALGHFDHTILYGVKPWKEFEPLYQPVKKNRKGAYEYWLDR.DFEPLYDADAADWREKAPILHDMFVLGKKPVA
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILR.......IG..GETHAHAHRMALKILDDMNLM...RVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR........................
+s1:
+.....................................................................................ASCRTGRLPMPDD......PLFNSTHMHGLRHSSRIAGLGMIAVIWIMYEKLRHSHHYITYKGPENPFARIRHRRFPGGAFMFGWGNNGLNRDCGIKEFECWAGYTGKEYTYV
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPTPGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR.........................................
+s1:
+..............PRPFGVWA...PATTLAEYRARIPNPFAYSFKWVYSMKREVFYPPEALAHFKDPQQFKDAVDTVIAMRVSDKIFGEGQKLP...RHPVILMLMVLATHGFIIFSGLKYYYGTYMPANNPTWRKTVNKEWEEAIN...NSPWDHMSHVWQYSDEYAAALGDTAAPGQRKFYIPA
+s2:
+VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLYTSIEQQVAKRFSKDPSKLQPT...PGVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPF..DNSPLLFEMIEYPERGEVHVLIRSPDTHPNLQR.........................
+s1:
+MLRRHAYKTAACVTAIQVARAVHSIAVLQNSTPATTAQKLGSVVSKEEVAAVNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLIATITDEVDYTSIEQQVAKRFSKDPSKLQPTPGALKHFRENNWKDMKSLITFYEETMYPIRMKHKEYKYHELTSFHIKDVLKRGLSAFKQSYLDEQREEQTKVKAYMKSCDDFVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVGTASLENISDEVLKLISNRHQTPLDDGVLIRSPDTHPNLQRSPE
+s2:
+...................................................VNKVPASLLEKVCNPRLVAFTAMDLARTRFAPL.........YTSIEQQVAKRFSKDPSKLQPTPG................................................................................VRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNLMRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVH............................VLIRSPDTHPNLQR...
+"Adjust for PAE" is checked in the distance restraint options, but the
+reference model has no PAE matrix assigned. This option has been ignored.
+> isolde restrain distances "#1.2/L3" templateAtoms "#6/L3" perChain false
+> adjustForConfidence false useCoordinateAlignment false kappa 4.40 fallOff
+> 2.50 groupName "Reference Distance Restraints"
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+[Repeated 1 time(s)]Computing secondary structure
+> isolde restrain torsions #1.2/L3 templateResidues #6/L3 adjustForConfidence
+> false sidechains true springConstant 250.00 alpha 0.20
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+[Repeated 1 time(s)]Computing secondary structure
+> select ~#1/L3&#1
+atoms, 274109 bonds, 40 pseudobonds, 16513 residues, 19 models selected
+> isolde ignore sel
+ISOLDE: currently ignoring 16513 residues in model 1.2
+> select #1/L3
+atoms, 4034 bonds, 1 pseudobond, 246 residues, 2 models selected
+> isolde sim start #1.2/L3
+ISOLDE: started sim
+> select #6:312-325
+atoms, 237 bonds, 14 residues, 1 model selected
+> style sel stick
+Changed 235 atom styles
+> style sel stick
+Changed 235 atom styles
+> show sel atoms
+> select #1
+atoms, 278143 bonds, 41 pseudobonds, 16759 residues, 23 models selected
+> hide sel atoms
+[Repeated 1 time(s)]
+> show sel cartoons
+> select ~#1/L3&#1
+atoms, 274109 bonds, 40 pseudobonds, 16513 residues, 23 models selected
+> hide sel atoms
+> hide sel cartoons
+> ui mousemode right "isolde tug residue"
+> select #1/L3:94-117
+atoms, 387 bonds, 24 residues, 1 model selected
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 5 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> hide #!6 models
+> select #1
+atoms, 278143 bonds, 41 pseudobonds, 16759 residues, 23 models selected
+> show sel atoms
+> show sel cartoons
+> select #1/L3
+atoms, 4034 bonds, 1 pseudobond, 246 residues, 2 models selected
+> isolde sim start #1.2/L3
+ISOLDE: started sim
+> isolde sim stop discardTo start
+Sim termination reason: None
+reverting to start
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde ~ignore
+> isolde sim start #1.2/L3
+ISOLDE: started sim
+> close #1.2.9
+> ui tool show "Ramachandran Plot"
+> isolde pepflip #1.2/Kp:84
+[Repeated 3 time(s)]
+> isolde pepflip #1.2/L3:122
+> close #1.2.7
+> isolde pepflip #1.2/L3:92
+> isolde pepflip #1.2/L3:119
+> isolde pepflip #1.2/L3:105
+[Repeated 3 time(s)]
+> isolde pepflip #1.2/L3:117
+Tugging of non-polar hydrogens is not enabled. Applying tug to the nearest
+bonded heavy atom.
+> isolde pepflip #1.2/L3:117
+> isolde pepflip #1.2/L3:118
+> isolde pepflip #1.2/L3:119
+> isolde pepflip #1.2/L3:120
+[Repeated 1 time(s)]
+> ui tool show "Ramachandran Plot"
+[Repeated 1 time(s)]
+> isolde pepflip #1.2/L3:122
+Tugging of non-polar hydrogens is not enabled. Applying tug to the nearest
+bonded heavy atom.
+> isolde pepflip #1.2/L3:122
+> isolde pepflip #1.2/L3:121
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 6 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> volume #1.1.1.1 level 0.176
+> volume #1.1.1.1 level 0.1484
+> volume #1.1.1.1 level 0.1718
+> isolde sim start #1.2/L3:67
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 2 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde sim start #1.2/L3:82-100
+ISOLDE: started sim
+Tugging of non-polar hydrogens is not enabled. Applying tug to the nearest
+bonded heavy atom.
+> ui tool show "Ramachandran Plot"
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 2 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> show #8 models
+> select clear
+> delete #8:1-13
+> open "/Users/rafaelrocha/Library/CloudStorage/GoogleDrive-
+> rafael.eduardo.oliveira.rocha@gmail.com/Other computers/My
+> Computer/supercomplex/supercomplexV-
+> IV2-II/cryosparc_P43_J450_008_volume_map_sharp.mrc"
+Opened cryosparc_P43_J450_008_volume_map_sharp.mrc as #9, grid size
+,500,500, pixel 1.21, shown at level 0.118, step 2, values float32
+> hide #8 models
+> transparency #9.1#1.1.1.1.1 0
+> transparency #9.1#1.1.1.1.1 50
+> volume #9 step 1
+> volume #9 level 0.2216
+> delete #1/K5
+> hide #!9 models
+> show #8 models
+> combine #1,8
+Remapping chain ID 'A' in AlphaFold A0A640KIH4 #8 to 'F'
+> save /Users/rafaelrocha/supercomplex/supercomplexV-
+> IV2-II/cryosparc_P43_J450_008_volume_map_sharp_NOSEQ/superComplexConsolidation/superComplexConsolidatedV7.cif
+Not saving entity_poly_seq for non-authoritative sequences
+[Repeated 3 time(s)]
+> close #1
+> clipper associate #9 toModel #10
+Opened cryosparc_P43_J450_008_volume_map_sharp.mrc as #1.1.1.1, grid size
+,500,500, pixel 1.21, shown at level 0.203, step 1, values float32
+> volume #1.1.1.1 style surface
+> transparency #1.1.1.1.1 50
+> addh #1 hbodn f
+Expected a keyword
+> addh #1 hbond false
+Summary of feedback from adding hydrogens to combination #1.2
+---
+warning | Not adding hydrogens to combination #1.2/GT ALA 93 CA because it is missing heavy-atom bond partners
+notes | No usable SEQRES records for combination (#1.2) chain A; guessing termini instead
+No usable SEQRES records for combination (#1.2) chain A0; guessing termini
+instead
+No usable SEQRES records for combination (#1.2) chain AG; guessing termini
+instead
+No usable SEQRES records for combination (#1.2) chain AU; guessing termini
+instead
+No usable SEQRES records for combination (#1.2) chain Ab; guessing termini
+instead
+messages similar to the above omitted
+Termini for combination (#1.2) chain L3 determined from SEQRES records
+Termini for combination (#1.2) chain F determined from SEQRES records
+Chain-initial residues that are actual N termini: combination #1.2/A ALA 34,
+combination #1.2/A0 PRO 204, combination #1.2/AG PHE 18, combination #1.2/AU
+LYS 35, combination #1.2/Ab GLU 206, combination #1.2/Aj LYS 208, combination
+#1.2/Aq LYS 25, combination #1.2/Ar LEU 23, combination #1.2/B ALA 23,
+combination #1.2/BI ALA 23, combination #1.2/BK THR 37, combination #1.2/BP
+GLY 22, combination #1.2/C SER 85, combination #1.2/C0 ILE 33, combination
+#1.2/C1 ILE 33, combination #1.2/C2 ILE 33, combination #1.2/C3 ILE 33,
+combination #1.2/C4 SER 34, combination #1.2/C5 ILE 33, combination #1.2/C6
+ILE 33, combination #1.2/C7 ILE 33, combination #1.2/C8 ILE 33, combination
+#1.2/C9 ILE 33, combination #1.2/D TYR 18, combination #1.2/D6 VAL 7,
+combination #1.2/E PHE 33, combination #1.2/E1 LEU 51, combination #1.2/E4 GLN
+, combination #1.2/Ek ASN 26, combination #1.2/Eq ASN 62, combination
+#1.2/Es VAL 2, combination #1.2/Ev GLY 3, combination #1.2/F9 HIS 37,
+combination #1.2/FF HIS 98, combination #1.2/FH VAL 18, combination #1.2/FL
+MET 1, combination #1.2/FO PHE 12, combination #1.2/Fy PRO 60, combination
+#1.2/Fz VAL 58, combination #1.2/GT ALA 6, combination #1.2/I0 SER 160,
+combination #1.2/IE LYS 26, combination #1.2/IY SER 2, combination #1.2/Il TYR
+, combination #1.2/Ix ASP 152, combination #1.2/Iy THR 22, combination
+#1.2/J6 THR 2, combination #1.2/JC GLU 22, combination #1.2/JI PRO 11,
+combination #1.2/JJ MET 1, combination #1.2/JN ALA 2, combination #1.2/Jw VAL
+, combination #1.2/Jx LYS 11, combination #1.2/KI THR 26, combination
+#1.2/Ke ALA 44, combination #1.2/Kp PRO 53, combination #1.2/Ks GLU 4,
+combination #1.2/LG TRP 20, combination #1.2/LO TYR 37, combination #1.2/LR
+SER 78, combination #1.2/LY PRO 182, combination #1.2/M PRO 2, combination
+#1.2/Mg ILE 36, combination #1.2/Mq SER 34, combination #1.2/Mr THR 38,
+combination #1.2/NF LYS 30, combination #1.2/NM TYR 82, combination #1.2/Np
+MET 1, combination #1.2/R MET 1, combination #1.2/TB MET 18, combination
+#1.2/Y MET 1, combination #1.2/a TYR 3, combination #1.2/t0 THR 38,
+combination #1.2/t1 THR 2, combination #1.2/t2 TYR 37, combination #1.2/t3 PHE
+, combination #1.2/t4 LEU 23, combination #1.2/t5 THR 26, combination
+#1.2/t6 MET 1, combination #1.2/t7 MET 1, combination #1.2/t8 VAL 21,
+combination #1.2/t9 ASP 152, combination #1.2/ta MET 1, combination #1.2/tb
+SER 160, combination #1.2/tc THR 22, combination #1.2/td TYR 26, combination
+#1.2/te GLU 4, combination #1.2/tf ALA 2, combination #1.2/tg PRO 182,
+combination #1.2/AG PHE 18, combination #1.2/Ar LEU 23, combination #1.2/I0
+SER 160, combination #1.2/Il TYR 26, combination #1.2/Ix ASP 152, combination
+#1.2/Iy THR 22, combination #1.2/J6 THR 2, combination #1.2/JI PRO 11,
+combination #1.2/JI GLU 259, combination #1.2/JJ MET 1, combination #1.2/JN
+ALA 2, combination #1.2/Jw VAL 21, combination #1.2/Jx LYS 11, combination
+#1.2/KI THR 26, combination #1.2/Ke ALA 44, combination #1.2/Kp PRO 53,
+combination #1.2/Ks GLU 4, combination #1.2/LG TRP 20, combination #1.2/LO TYR
+, combination #1.2/LR SER 78, combination #1.2/LY PRO 182, combination
+#1.2/M PRO 2, combination #1.2/Mg ILE 36, combination #1.2/Mq SER 34,
+combination #1.2/Mr THR 38, combination #1.2/NF LYS 30, combination #1.2/NF
+ARG 189, combination #1.2/NM TYR 82, combination #1.2/Np MET 1, combination
+#1.2/TB MET 18, combination #1.2/Y MET 1, combination #1.2/t0 THR 38,
+combination #1.2/t1 THR 2, combination #1.2/t2 TYR 37, combination #1.2/t3 PHE
+, combination #1.2/t4 LEU 23, combination #1.2/t5 THR 26, combination
+#1.2/t6 MET 1, combination #1.2/t7 MET 1, combination #1.2/t8 VAL 21,
+combination #1.2/t9 ASP 152, combination #1.2/ta MET 1, combination #1.2/tb
+SER 160, combination #1.2/tc THR 22, combination #1.2/td TYR 26, combination
+#1.2/te GLU 4, combination #1.2/tf ALA 2, combination #1.2/tg PRO 182,
+combination #1.2/R MET 1, combination #1.2/A ALA 34, combination #1.2/A0 PRO
+, combination #1.2/AU LYS 35, combination #1.2/AU GLN 151, combination
+#1.2/AU GLN 436, combination #1.2/Ab GLU 206, combination #1.2/Ab THR 521,
+combination #1.2/Aj LYS 208, combination #1.2/Aq LYS 25, combination #1.2/B
+ALA 23, combination #1.2/BI ALA 23, combination #1.2/BK THR 37, combination
+#1.2/BK GLN 151, combination #1.2/BK VAL 437, combination #1.2/BP GLY 22,
+combination #1.2/C SER 85, combination #1.2/C0 ILE 33, combination #1.2/C1 ILE
+, combination #1.2/C2 ILE 33, combination #1.2/C3 ILE 33, combination
+#1.2/C4 SER 34, combination #1.2/C5 ILE 33, combination #1.2/C6 ILE 33,
+combination #1.2/C7 ILE 33, combination #1.2/C8 ILE 33, combination #1.2/C9
+ILE 33, combination #1.2/D TYR 18, combination #1.2/D ILE 234, combination
+#1.2/D6 VAL 7, combination #1.2/D6 VAL 63, combination #1.2/E PHE 33,
+combination #1.2/E GLN 151, combination #1.2/E GLN 438, combination #1.2/E1
+LEU 51, combination #1.2/E1 ASP 217, combination #1.2/E4 GLN 35, combination
+#1.2/Ek ASN 26, combination #1.2/Eq ASN 62, combination #1.2/Es VAL 2,
+combination #1.2/Ev GLY 3, combination #1.2/F9 HIS 37, combination #1.2/FF HIS
+, combination #1.2/FF MET 124, combination #1.2/FH VAL 18, combination
+#1.2/FL MET 1, combination #1.2/FO PHE 12, combination #1.2/Fy PRO 60,
+combination #1.2/Fz VAL 58, combination #1.2/IE LYS 26, combination #1.2/IE
+VAL 199, combination #1.2/IY SER 2, combination #1.2/JC GLU 22, combination
+#1.2/a TYR 3, combination #1.2/GT ALA 6
+Chain-initial residues that are not actual N termini: combination #1.2/AU GLN
+, combination #1.2/AU GLN 436, combination #1.2/Ab THR 521, combination
+#1.2/BK GLN 151, combination #1.2/BK VAL 437, combination #1.2/D ILE 234,
+combination #1.2/D6 VAL 63, combination #1.2/E GLN 151, combination #1.2/E GLN
+, combination #1.2/E1 ASP 217, combination #1.2/FF MET 124, combination
+#1.2/IE VAL 199, combination #1.2/JI GLU 259, combination #1.2/NF ARG 189,
+combination #1.2/L3 VAL 52, combination #1.2/L3 VAL 312, combination #1.2/F
+ALA 14
+Chain-final residues that are actual C termini: combination #1.2/A PRO 357,
+combination #1.2/A0 LYS 685, combination #1.2/AG SER 196, combination #1.2/AU
+VAL 574, combination #1.2/Ab ARG 690, combination #1.2/Aj HIS 690, combination
+#1.2/Aq GLN 187, combination #1.2/Ar TRP 118, combination #1.2/B LYS 160,
+combination #1.2/BI GLN 187, combination #1.2/BK VAL 574, combination #1.2/BP
+GLN 187, combination #1.2/C MET 349, combination #1.2/C0 SER 106, combination
+#1.2/C1 SER 106, combination #1.2/C2 SER 106, combination #1.2/C3 SER 106,
+combination #1.2/C4 SER 106, combination #1.2/C5 SER 106, combination #1.2/C6
+SER 106, combination #1.2/C7 SER 106, combination #1.2/C8 SER 106, combination
+#1.2/C9 SER 106, combination #1.2/D VAL 258, combination #1.2/D6 THR 70,
+combination #1.2/E GLY 575, combination #1.2/E1 GLY 239, combination #1.2/E4
+GLY 203, combination #1.2/Ek SER 103, combination #1.2/Eq TYR 145, combination
+#1.2/Es HIS 136, combination #1.2/Ev ALA 386, combination #1.2/F9 GLN 103,
+combination #1.2/FF PRO 174, combination #1.2/FH VAL 157, combination #1.2/FL
+GLY 233, combination #1.2/FO ALA 159, combination #1.2/Fy ALA 117, combination
+#1.2/Fz VAL 105, combination #1.2/GT ALA 93, combination #1.2/I0 LYS 383,
+combination #1.2/IE GLY 204, combination #1.2/IY ASN 295, combination #1.2/Il
+GLU 104, combination #1.2/Ix ILE 279, combination #1.2/Iy GLN 115, combination
+#1.2/J6 PHE 199, combination #1.2/JC GLU 183, combination #1.2/JI LYS 491,
+combination #1.2/JJ ILE 549, combination #1.2/JN VAL 108, combination #1.2/Jw
+PHE 144, combination #1.2/Jx ASP 124, combination #1.2/KI GLU 225, combination
+#1.2/Ke LEU 138, combination #1.2/Kp GLU 224, combination #1.2/Ks ALA 156,
+combination #1.2/LG SER 123, combination #1.2/LO LYS 342, combination #1.2/LR
+GLY 148, combination #1.2/LY ALA 345, combination #1.2/M PHE 103, combination
+#1.2/Mg ALA 250, combination #1.2/Mq LYS 90, combination #1.2/Mr LEU 147,
+combination #1.2/NF SER 246, combination #1.2/NM MET 144, combination #1.2/Np
+VAL 283, combination #1.2/R HIS 62, combination #1.2/TB THR 81, combination
+#1.2/Y ILE 210, combination #1.2/a GLN 96, combination #1.2/t0 LEU 147,
+combination #1.2/t1 PHE 199, combination #1.2/t2 LYS 342, combination #1.2/t3
+SER 196, combination #1.2/t4 TRP 118, combination #1.2/t5 GLU 225, combination
+#1.2/t6 ILE 549, combination #1.2/t7 VAL 283, combination #1.2/t8 PHE 144,
+combination #1.2/t9 ILE 279, combination #1.2/ta ILE 210, combination #1.2/tb
+LYS 383, combination #1.2/tc GLN 115, combination #1.2/td GLU 104, combination
+#1.2/te ALA 156, combination #1.2/tf VAL 108, combination #1.2/tg ALA 345,
+combination #1.2/F TYR 607, combination #1.2/AG SER 196, combination #1.2/Ar
+TRP 118, combination #1.2/I0 LYS 383, combination #1.2/Il GLU 104, combination
+#1.2/Ix ILE 279, combination #1.2/Iy GLN 115, combination #1.2/J6 PHE 199,
+combination #1.2/JI PHE 252, combination #1.2/JI LYS 491, combination #1.2/JJ
+ILE 549, combination #1.2/JN VAL 108, combination #1.2/Jw PHE 144, combination
+#1.2/Jx ASP 124, combination #1.2/KI GLU 225, combination #1.2/Ke LEU 138,
+combination #1.2/Kp GLU 224, combination #1.2/Ks ALA 156, combination #1.2/LG
+SER 123, combination #1.2/LO LYS 342, combination #1.2/LR GLY 148, combination
+#1.2/LY ALA 345, combination #1.2/M PHE 103, combination #1.2/Mg ALA 250,
+combination #1.2/Mq LYS 90, combination #1.2/Mr LEU 147, combination #1.2/NF
+LEU 183, combination #1.2/NF SER 246, combination #1.2/NM MET 144, combination
+#1.2/Np VAL 283, combination #1.2/TB THR 81, combination #1.2/Y ILE 210,
+combination #1.2/t0 LEU 147, combination #1.2/t1 PHE 199, combination #1.2/t2
+LYS 342, combination #1.2/t3 SER 196, combination #1.2/t4 TRP 118, combination
+#1.2/t5 GLU 225, combination #1.2/t6 ILE 549, combination #1.2/t7 VAL 283,
+combination #1.2/t8 PHE 144, combination #1.2/t9 ILE 279, combination #1.2/ta
+ILE 210, combination #1.2/tb LYS 383, combination #1.2/tc GLN 115, combination
+#1.2/td GLU 104, combination #1.2/te ALA 156, combination #1.2/tf VAL 108,
+combination #1.2/tg ALA 345, combination #1.2/R HIS 62, combination #1.2/A PRO
+, combination #1.2/A0 LYS 685, combination #1.2/AU LEU 139, combination
+#1.2/AU ASP 430, combination #1.2/AU VAL 574, combination #1.2/Ab VAL 515,
+combination #1.2/Ab ARG 690, combination #1.2/Aj HIS 690, combination #1.2/Aq
+GLN 187, combination #1.2/B LYS 160, combination #1.2/BI GLN 187, combination
+#1.2/BK GLY 138, combination #1.2/BK ASP 430, combination #1.2/BK VAL 574,
+combination #1.2/BP GLN 187, combination #1.2/C MET 349, combination #1.2/C0
+SER 106, combination #1.2/C1 SER 106, combination #1.2/C2 SER 106, combination
+#1.2/C3 SER 106, combination #1.2/C4 SER 106, combination #1.2/C5 SER 106,
+combination #1.2/C6 SER 106, combination #1.2/C7 SER 106, combination #1.2/C8
+SER 106, combination #1.2/C9 SER 106, combination #1.2/D LYS 206, combination
+#1.2/D VAL 258, combination #1.2/D6 LEU 52, combination #1.2/D6 THR 70,
+combination #1.2/E LEU 139, combination #1.2/E ALA 429, combination #1.2/E GLY
+, combination #1.2/E1 GLU 123, combination #1.2/E1 GLY 239, combination
+#1.2/E4 GLY 203, combination #1.2/Ek SER 103, combination #1.2/Eq TYR 145,
+combination #1.2/Es HIS 136, combination #1.2/Ev ALA 386, combination #1.2/F9
+GLN 103, combination #1.2/FF TYR 118, combination #1.2/FF PRO 174, combination
+#1.2/FH VAL 157, combination #1.2/FL GLY 233, combination #1.2/FO ALA 159,
+combination #1.2/Fy ALA 117, combination #1.2/Fz VAL 105, combination #1.2/IE
+VAL 194, combination #1.2/IE GLY 204, combination #1.2/IY ASN 295, combination
+#1.2/JC GLU 183, combination #1.2/a GLN 96, combination #1.2/GT ALA 93
+Chain-final residues that are not actual C termini: combination #1.2/AU LEU
+, combination #1.2/AU ASP 430, combination #1.2/Ab VAL 515, combination
+#1.2/BK GLY 138, combination #1.2/BK ASP 430, combination #1.2/D LYS 206,
+combination #1.2/D6 LEU 52, combination #1.2/E LEU 139, combination #1.2/E ALA
+, combination #1.2/E1 GLU 123, combination #1.2/FF TYR 118, combination
+#1.2/IE VAL 194, combination #1.2/JI PHE 252, combination #1.2/NF LEU 183,
+combination #1.2/L3 HIS 283, combination #1.2/L3 ARG 325
+Adding 'H' to combination #1.2/F ALA 14
+combination #1.2/L3 ARG 325 is not terminus, removing H atom from 'C'
+hydrogens added
+> open "/Users/rafaelrocha/Library/CloudStorage/GoogleDrive-
+> rafael.eduardo.oliveira.rocha@gmail.com/Other computers/My
+> Computer/supercomplex/supercomplexV-
+> IV2-II/cryosparc_P43_J450_008_volume_map_sharp_NOSEQ/superComplexConsolidation/chainK5.cif"
+Summary of feedback from opening
+/Users/rafaelrocha/Library/CloudStorage/GoogleDrive-
+rafael.eduardo.oliveira.rocha@gmail.com/Other computers/My
+Computer/supercomplex/supercomplexV-
+IV2-II/cryosparc_P43_J450_008_volume_map_sharp_NOSEQ/superComplexConsolidation/chainK5.cif
+---
+warnings | Unknown polymer entity '46' on line 356
+Missing or incomplete sequence information. Inferred polymer connectivity.
+Chain information for chainK5.cif #9
+---
+Chain | Description
+K5 | No description available
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 90 residues in model #1.2 to IUPAC-IUB
+standards.
+> select #1/K5
+Nothing selected
+> changechains #1/A K5
+Chain IDs of 324 residues changed
+> select #1/K5
+atoms, 5377 bonds, 324 residues, 1 model selected
+> hide #!9 models
+> hide #8 models
+> changechains #1/K5 A
+Chain IDs of 324 residues changed
+> changechains #1/F K5
+Chain IDs of 594 residues changed
+> select #1/K5
+atoms, 9120 bonds, 594 residues, 1 model selected
+> select #1/A
+atoms, 5377 bonds, 324 residues, 1 model selected
+> select #1/K5
+atoms, 9120 bonds, 594 residues, 1 model selected
+> matchmaker #9 to #1.2
+Computing secondary structure
+Parameters
+---
+Chain pairing | bb
+Alignment algorithm | Needleman-Wunsch
+Similarity matrix | BLOSUM-62
+SS fraction | 0.3
+Gap open (HH/SS/other) | 18/18/6
+Gap extend | 1
+SS matrix |  |  | H | S | O
+---|---|---|---
+H | 6 | -9 | -6
+S |  | 6 | -6
+O |  |  | 4
+Iteration cutoff | 2
+Matchmaker combination, chain K5 (#1.2) with chainK5.cif, chain K5 (#9),
+sequence alignment score = 2215.7
+RMSD between 387 pruned atom pairs is 1.201 angstroms; (across all 498 pairs:
+.475)
+> color #9 bychain
+> color #9 byhetero
+> color modify #9 hue + 50
+Computing secondary structure
+s1:
+............................................................................................................................................................................................................................................................................ASKEEQIKKNTKIAIEMIRRYKGETPMSYTRKHTATIEQLEREIEALLGGAQKMRKATTD.......DQPMDKLGLMERCLRHALWSYHKDEGKYDFDEIARWVVYTPEDEVKLAQMKRQVEAKSKLAAYRAKRAEQ......GLPEAPVPQISWEEEYKNVTDRELVNEKRLRYDTIAANTMERDEAQIEAVLQQYRKPIQDKRLDDLVDLLERFKPVLAREAIMQRLTIKHLEGQLGVWRYMDWCPEVRDRAELEVDISGFQWWSPLEERRLLPVRLRSVNEVREIMAQTQSSKAAEASAHSPQASQSAGDGDRERLLKEVLALQARIHQRDDAP
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQ..PELR.....ADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSH.ALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLT.NELESIPP..................................................................................................
+s1:
+.......................................................................................................................................................................................PAEHKGRVGYVSQVIGAVVDVHFS.........EGVPPVLTALDVTEDLG..RDEPLTLE....IVQHLDANTGRCIAMQTTDLLKL.KSKVVSTGGNISVPVGRETLGRIFNV.LGDAIDQRG...........PVGEKMRMAIHAEAPKLADQAAEDTILTTGIKVIDLILPYCKGG..KIGLFGGAGVGKTVIIMELINNVAKGHGGFSVFAGVGERTREGTDLYLEMMQSKVIDLKGDSKCVLVYGQMNEPPGARARVAQSALTMAEYFRDVEGQNVLLFIDNIFRFTQANSEVSALLGRIPAAVGYQPTLAEDLGMLQERITSTTKGSITSVQAVYVPADDITDPAPATTFSHLDATTVLDRAVAESGIYPAVNPLECASRIMDPDVIDVNHYNVAQDIVQMLTKYKELQDIIAVLGIDELSEEDKVVVDRARKVTRFLSQPFQVAEVFTGMTGHYVQLNDTVESFSGLLMGSYDQIPEMAFYMVGGINSVLEKAKAMAEEAAAMEK
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDV.VSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHG.ANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNN..KGD...IPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHD....KSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLA..YRPVHMEMLTNELESIPP........................................................................................................................................................................................
+s1:
+......................................................................................................................................................................................................................................................................................................................................................FFGKGWDNAALDTIFSSMLRKPEVNDRIRTQYASTMD...PRDADVLRRLGEVSKENKTFIRVFLPPHL.GDPHRLLKCYSLMAYPILDDKGGQLKVEM.DGCKLD.AFADPDDDYSKVVIPHIELVEYLAKSLLETMKWEATPRGAASLLESLYRGAEIPDHVFQTPAVIERLEDYKDGNKVIS
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDI..PIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYL.DDANGTVRLAYRPVHMEMLTNEL...ESIPP.......................
+s1:
+..........................................................................................................................................................................................................KATEMIGYVHSIDGTIATLIPAPGNPGVAYNTIIMIQVSPTTFAAGLVFNLEKDGRIGIILMD..NITEVQSGQKVMATGKLLYIPV......GAGVL..GKVVNPLGHE....VPVGLQTLGKVDAGAPNIVSRSPVNYNL...LTGFKAVDTMI....PIGRGQRELIVGDRQTGKTSIAVSTIINQVRNNQQIL....SKNAVISIYVSIGQRCSNVARIHRLLRSYG.ALRY..TTVMAATAAEPAGLQYLAPYSGVTMGEYFMNRGRHCLCVYDD.LSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAAMLSPGKGGGSVTALPIVETLSNDVTAYIVTNVISITDGQIYLDTKLFTGGQRPAVNIGLSVSRVGSSAQNVAMKAVAGKLKGILAEYRKLAADQVQTVPMIRGARFVALFNQKNPSFFMNALVSLYACLNGYLDDVKVNYAKLYEYLLVNKDLSVMYGTATNKFFYMYVQQLNYVIRFFTLNHPILNAEVEEMLKQHTHLFLQHYQSKMNAIKTEKEIKALKNLLYSCKRAV
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPA...EDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFA.GVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVP.GLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPEL...RADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQ.TGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVV.RMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP.......................................................................................................................................................................................................................................................
+s1:
+.........................................................................................................................................................................................EHKGRVGYVSQVIGAVVDVHFS.........EGVPPVLTALDVTEDLGRDEPLTLEIVQHLDANTGRCIAMQ..TTDLLKL....KSKVVSTGGNISVPVGRETLGRIFNV.LGDAIDQRG...........PVGEKMRMAIHAEAPKLADQAAEDTILTTGIKVIDLILPYCKGG..KIGLFGGAGVGKTVIIMELINNVAKGHGGFSVFAGVGERTREGTDLYLEMMQSKVIDLKGDSKCVLVYGQMNEPPGARARVAQSALTMAEYFRDVEGQNVLLFIDNIFRFTQANSEVSALLGRIPAAVGYQPTLAEDLGMLQERITSTTKGSITSVQAVYVTDPAPATTFSHLDATTVLDRAVAESGIYPAVNPLECASRIMDPDVIDVNHYNVAQDIVQMLTKYKELQDIIAVLGIDELSEEDKVVVDRARKVTRFLSQPFQVAEVFTGMTGHYVQLNDTVESFSGLLMGSYDQIPEMAFYMVGGINSVLEKAKAMAEEAAAMEKQRRAR
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHG.ANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNN..KGD...IPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHD....KSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLA..YRPVHMEMLTNELESIPP........................................................................................................................................................................................
+s1:
+........................................................................................................................................................................................................KGRVGYVSQVIGAVVDVHFSEGVPPVLTALDVTEDLGRDEPLTLEIVQHLDANTGRCIAMQ..TTDLLKL....KSKVVSTGGNISVPVGRETLGRIFNV.LGDAIDQRG...........PVGEKMRMAIHAEAPKLADQAAEDTILTTGIKVIDLILPYCKGGKI..GLFGGAGVGKTVIIMELINNVAKGHGGFSVFAGVGERTREGTDLYLEMMQSKVIDLKGDSKCVLVYGQMNEPPGARARVAQSALTMAEYFRDVEGQNVLLFIDNIFRFTQANSEVSALLGRIPAAVGYQPTLAEDLGMLQERITSTTKGSITSVQAVYVPADDITDPAPATTFSHLDATTVLDRAVAESGIYPAVNPLECASRIMDPDVIDVNHYNVAQDIVQMLTKYKELQDIIAVLGIDELSEEDKVVVDRARKVTRFLSQPFQVAEVFTGMTGHYVQLNDTVESFSGLLMGSYDQIPEMAFYMVGGINSVLEKAKAMAEEAAAMEENKAAH
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCT....GDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHG.ANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNN..KGD...IPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHD....KSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLA..YRPVHMEMLTNELESIPP.............................................................................................................................................................................................
+s1:
+KYDLFGYEVDTNTAPWIEKVKKCR.YYDEAGEVLVSMNVKNCPPDLETYNATLQKIFEAPSKQEKPVENESKFCAMMDLMEEMQHRNKVKPNEESWTWVMKECVQSGQFRLGYCVAKLMEAEF.............KRVPEDLVKQNEANAAKAKADGKEHPSTLAQQQSLFDIKIQ....................................................................................................................................................................................................................................................................................................................................................
+s2:
+............AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDV....ACISKLY..PSRS.HTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+.....................................................................................LHFPLSPPPIEIDYLDSDPLEFAVRTEARRWGFDDLQYMRELAFVRIKENPSIGDFRRMTPEERRDLFWGSD....RQDFFRYITLKLTGHPEHLYHRGW..................................................................................................................................................................................................................................................................................................................................
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPF.LRTK......DGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLI..TEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+....................................................................................................................................................................................................................................ASDLKMVSLHKILI...GEVQFRNNALLKACNIEHNFGPTWKSEIEAYA...KSLPAEEKNCLERQIARVSMTRYTTRELAEYCGEGPEHVDAVAREANIAQAKVYAQKNGADKLETYVKAEAKNAGWSEAETKKFMDAVKAAK........................................................................................................................................
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPT.....VHYSMGGVP.TLWTGEVISPRDGDDNAIVPGLLAAGECACASVH....GANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+AKKYDLFGYEVDTNTAPWIEKVKKCR.YYDEAGEVLVSMNVKNCPPDLETYNATLQKIFEAPSKQEKPVENESKFCAMMDLMEEMQHRNKVKPNEESWTWVMKECVQSGQFRLGYCVAKLMEAEF.............KRVPEDLVKQNEANAAKAKADGKEHPSTLAQQQSLFDIKIQ....................................................................................................................................................................................................................................................................................................................................................
+s2:
+..............AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDV....ACISKLY..PSRS.HTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+.....................................................................................................................................................................................................TEMIGYVH.......SIDGTIATLIPAPGNPGVAYNTIIMIQVSPTTFAAGLVFNLEKDGRIGIILMD..NITEVQSGQKVMATGKLLYIPV......GAGVL..GKVVNPLGHE....VPVGQTLGKVDAGAPNIVSRSPVNYNL...LTGFKAVDTMI....PIGRGQRELIVGDRQTGKTSIAVSTIINQVRNNQQIL....SKNAVISIYVSIGQRCSNVARIHRLLRSYG.ALRY..TTVMAATAAEPAGLQYLAPYSGVTMGEYFMNRGRHCLCVYDDL.SKQAVAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAAMLSPGKGGGSVTALPIVETLSNDVTAYIVTNVISITDGQIYLDTKLFTGGQRPAVNIGLSVSRVGSSAQNVAMKAVAGKLKGILAEYRKLAADVQTVPMIRGARFVALFNQKNPSFFMNALVSLYACLNGYLDDVKVNYAKLYEYLLVNKDLSVMYGTATNKFFYMYVQQLNYVIRFFTLNHPILNAEVEEMLKQHTHLFLQHYQSKMNAIKTEKEIKALKNLLYSCKRAV
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPA...EDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFA.GVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPEL...RADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQ.TGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVV.RMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP......................................................................................................................................................................................................................................................
+s1:
+GAKKYDLFGYEVDTNTAPWIEKVKKCRYYDEAGEVLVSMN.VKNCPPDLETYNATLQKIFEAPSKQEKPVENESKFCAMMDLMEEMQHRNKVKPNEESWTWVMKECVQSGQFRLGYCVAKLMEAE...FKRVPEDLVKQNEANAAKAKADGK....EHPSTLAQQQSLFDIKIQ..........................................................................................................................................................................................................................................................................................................................................................
+s2:
+...............AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDV....ACISKLY..PSRS.HTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+..........................................................................................................................................................................................................................SIAVIAAGAPAALLQAVSSILSKATGGAVKATQATSAASNAVVV......GMQAPRGVYACVAEPPSTASGPYAGVKTV.VVRAILPRSAPDT......................MQVRDILDVYPASGIACEKETAEAVKNFTKAAKVAVEKAKAMKATRVTLVM.KPATKYERLNGLFRETCTKTIEAA...GLSVETSTTAAATNTLI..MFPEKMSVVMVSDD..PVCENVQYAYAGAVGGV.HTTYYTDSGNKIYGGHSYRSVAM.ALAEELKSLGMKAEAAKVEAAVQKSPRNAAAAM
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITE.RDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTV.RLAYRPVHMEMLTNELESIPP......................
+s1:
+...................................................................................................ISIQGLHYVGTGLGAIALGGVGMGIGTIFGCLLIACARQPNLTKMLFNYAILGFALTEAIGLFALMLAFLMLFS.........................................................................................................................................................................................................................................................................................................................................
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFG...GQSIKQARRTCAAS.DRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+...................................................................................................ISIQGLHYVGTGLGAIALGGVGMGIGTIFGCLLIACARQPNLTKMLFNYAILGFALTEAIGLFALMLAFLMLFS.........................................................................................................................................................................................................................................................................................................................................
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFG...GQSIKQARRTCAAS.DRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+...................................................................................................ISIQGLHYVGTGLGAIALGGVGMGIGTIFGCLLIACARQPNLTKMLFNYAILGFALTEAIGLFALMLAFLMLFS.........................................................................................................................................................................................................................................................................................................................................
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFG...GQSIKQARRTCAAS.DRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+...................................................................................................ISIQGLHYVGTGLGAIALGGVGMGIGTIFGCLLIACARQPNLTKMLFNYAILGFALTEAIGLFALMLAFLMLFS.........................................................................................................................................................................................................................................................................................................................................
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFG...GQSIKQARRTCAAS.DRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+....................................................................................................SIQGLHYVGTGLGAIALGGVGMGIGTIFGCLLIACARQPNLTKMLFNYAILGFALTEAIGLFALMLAFLMLFS.........................................................................................................................................................................................................................................................................................................................................
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFG...GQSIKQARRTCAAS.DRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+...................................................................................................ISIQGLHYVGTGLGAIALGGVGMGIGTIFGCLLIACARQPNLTKMLFNYAILGFALTEAIGLFALMLAFLMLFS.........................................................................................................................................................................................................................................................................................................................................
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFG...GQSIKQARRTCAAS.DRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+...................................................................................................ISIQGLHYVGTGLGAIALGGVGMGIGTIFGCLLIACARQPNLTKMLFNYAILGFALTEAIGLFALMLAFLMLFS.........................................................................................................................................................................................................................................................................................................................................
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFG...GQSIKQARRTCAAS.DRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+...................................................................................................ISIQGLHYVGTGLGAIALGGVGMGIGTIFGCLLIACARQPNLTKMLFNYAILGFALTEAIGLFALMLAFLMLFS.........................................................................................................................................................................................................................................................................................................................................
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFG...GQSIKQARRTCAAS.DRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+...................................................................................................ISIQGLHYVGTGLGAIALGGVGMGIGTIFGCLLIACARQPNLTKMLFNYAILGFALTEAIGLFALMLAFLMLFS.........................................................................................................................................................................................................................................................................................................................................
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFG...GQSIKQARRTCAAS.DRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+...................................................................................................ISIQGLHYVGTGLGAIALGGVGMGIGTIFGCLLIACARQPNLTKMLFNYAILGFALTEAIGLFALMLAFLMLFS.........................................................................................................................................................................................................................................................................................................................................
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFG...GQSIKQARRTCAAS.DRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+.........................................................................................................................................................................................................................YTPSEELKKLYASDFERAQF.PANIV.PSDSVTFAKFLYKAV...........EPKGSFDAILKDFQTIAAAIPKLPIFWERTVVVSEVNEFKSL..........SAPTIFTLEWMQSNGMLDLLPDVAEVYETYV......SAKMKRVTAKIYVAPGKEQDRALVDKARKVAEQVVKDNKQLAGYTLVPKVLVDRSIVEGFAVDVQGTYVNEAVGRKIETEVLRKYLDSLSLY.DAEELKSGV.......................................
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDK..SPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+..............................................................................................................................................................................................................................................................................................................................................................................................................................................VALNWRDHGISYVKYLNVATEALHMATKDKARAKYSRFSTPNYIALVKKVPAFT................
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRL..AYRPVHMEMLTNELESIPP
+s1:
+............................................................................................................................................................................................................FFKATEMIGYVHSIDGTIATLIPAPGNPGVAYNTIIMIQVSPTTFAAGLVFNLEKDGRIGIILMD..NITEVQSGQKVMATGKLLYIPV......GAGVL..GKVVNPLGHE....VPVGLQTLGKVDAGAPNIVSRSPVNYNL...LTGFKAVDTMI....PIGRGQRELIVGDRQTGKTSIAVSTIINQVRNNQQIL....SKNAVISIYVSIGQRCSNVARIHRLLRSYG.ALRY..TTVMAATAAEPAGLQYLAPYSGVTMGEYFMNRGRHCLCVYDD.LSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAAMLSPGKGGGSVTALPIVETLSNDVTAYIVTNVISITDGQIYLDTKLFTGGQRPAVNIGLSVSRVGSSAQNVAMKAVAGKLKGILAEYRKLAAQTVPMIRGARFVALFNQKNPSFFMNALVSLYACLNGYLDDVKVNYAKLYEYLLVNKDLSVMYGTATNKFFYMYVQQLNYVIRFFTLNHPILNAEVEEMLKQHTHLFLQHYQSKMNAIKTEKEIKALKNLLYSCKRAVG
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTS....AKSCTGDGTAMVARAGLPA...EDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFA.GVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVP.GLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPEL...RADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQ.TGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVV.RMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP.....................................................................................................................................................................................................................................................
+s1:
+..............................................................................................................................................................................LSLLLCVHFSAIHRPPPPVPFTALAAFLYALT.LTAPVAEQRSGSSLHPQIEVGTEIEDMALFHLVVLPLVFFAAMCIGRG.....................................................................................................................................................................................................................................................
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKS..KYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+...............................................................................................................................................................................................................................................................................QMKVELTMQYLDEWMLRWRKFQTESDWQIEKNRQWWRKANIVTAGAVMGGLVMYTAGNATIRRQFGAPHFFDIGVDGK.LKEAICDTMTSRWRYTPQGYGRVMLVGLPTFFVFAISEHIQERRRLRAYVRQN.TVFGEQARRLVQNGK.IEEYLAVDIKASLPQNQTQLYAG.............................................................
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVP.TVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANR..LGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDS...MQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+.........................................................................................................................................................................................................NMFLFKDPVRRPQLSPEERAKVKINYAEWPEEFRDYDPDDPYKNSPEIIE......GLSSWNLFLWGV.ECAFIYQFYEVVFPKS....................................................................................................................................................................................................................
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+...................................................................................................................................................................................................................................................................................................................................................................................................NPVDHFRPNL.KFLSVYVE.....HQYVVDKWLHVKENWLKPWYLPWW.TPMYQAMTWYSQRNRNLMLVENHLNYRPYRYRRNDEDRENPY....................
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+........................................................................................................................................................................................................................................................................................VFFSTYRSKRIVAPGFLKGPVMASRAFFDYYFQRAWCGCVQWVIPGEVRLWACGVPVIYFIHRYHNDHSLEPDFVEKAMIQRWGGSL.EEVRKLSPQDQLRIRAFTDLEKLYSAYGPKDTIVQPPGDLLPGKDYYH......................................................................................................
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDD...........NAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRK...QPELRADAGE......ASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+GTWSVLKKNCLNFVPGLALFASQSRDAFATWMKIYNRGYKYGPQEFSDQAEAYTPDYWKRGHSQEKNMWVDMKLSEEVSQKELAQLMHYKQDLWRMGHGLGLSLFLGGYALIPAFFCLSSDTFAPSCFCKTEEEKKAWREAQDMYRYRSAPSYIMDTKWHFD..FHAYPWNATQERAWDDLFEKNNVRRDPKVL.RPAAEMYDGFLKFYQIRRKSLRHLARSMNLP..TFPLLSRTCASTRVKDYWNLAWNEDYMVIT...QKLHHQMSDEDLHDYAWRRFLAPY....DKNLSRDEIMTRVNDYHEFLGPKFVEEGKAP..NMIILTNYVLGYYNDPAYLVE..........DISALDGNDFEYMAHYGKDAFLRRLEFENG..PLRDQVEAHTQKLIADRAAAAAAEA....................................................................................................................................................................................
+s2:
+...........................................................................................AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQ.YGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+HLEPMSVWYLSSWTCVWWYSFFFWLPVLWADMIVPSFVYNKLPVIHFIQEKRAEQKLRRVLDETYTQ.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
+s2:
+........................................................AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+...................................................................................................................HPPKLEDIPPSSATKGFFGAYMARLIDIKWMMNRSVELGREYYISAPTLYLFLWMFCWKGFVIMRYGDGKPP.......................................................................................................................................................................................................................................................................................................................
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+.................................................................................................................................................................................................................................................................................................................................................................................................................................................VGNGPTFHTAGDNN.NTSEIQNAFPINERGIRSSSPFPEPNTAIYDSYMPWTYFQPIDVKVDKMPAPEAKYYQHHTKKPWDVSTTDLIEIQSRKKYVQGVGYFLMMIYLYFLMPKEKSYSGTTGSDGFYVMLPKNQPEKFV
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRP.VHMEMLTNELESIPP...........................................................................
+s1:
+................................................................................................................................................................................................................................................................................................................................................................................................................MFVFFVCDLVIMRILLCFCYSVWSRIIFVLFYNVFYICTELMFCIFDVYLFVGLCMFICLWFVLFNFYGLIVY..YCITYLNVYILFCIVFMYYMAFLFCFCFLLDFILFGSLLVGDAFMDVFFLRYLLCVLECFSLLCRCISTFLRMFCNLLSSHFLMLMFCDFVYFFIIFFLFFIMCDFIYFIIFTFAMLFCIIFYLFLYALDMFCALLQIFIFCNMIMQLIMDFLLLLSFHG
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSH...ALVHD........KSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDD.ANGTVRLAYRPVHMEMLTNELESIPP.............................................................................................................................
+s1:
+................................................................................................................................................................................................FTVPVALCTKQVAAMDEPLKRHIDAYEARGEDVTIAVWREYVDGQRALLPYRWAKFRNEVTYLTSG....QIALTDLAFADLLLFVRFLTKCLFIFIVAVMAGRRSVFPSLE......PTSPFVEEIVKNWQPNRLRRVAGAEYMARDQAAAAAAAAA........................................................................................................................................................................
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTI...LCT...GGYGRVYFTTTSAKSCTGDGTAMVA........RAGLPAEDMEF...VQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTL.WTGEVISPRDGDDNAIVPG..LLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+..................................PKTLNQFRNFSYIVVAWLGFNKGFREKAANDAEWIAHQQRVRQQNVERHQAASAMMEA......................................................................................................................................................................................................................................................................................................................................................................................................................
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+...........................................................................................VAPKTLNQFRNFSYIVVAWLGFNKGFREKAANDAEWIAHQQRVRQQNV..........................................................................................................................................................................................................................................................................................................................................................................
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMG...LPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+...................................................................................................................................................................................................................................................................................................................................................................................................................................................................AFHDVSTDAIRQMQASEALQKHLENAQLAHRVCVAKALKAD...EPPVEKCALTWGEVVMRYNQWSEYRPAFHDSDAQKRYSKYWTKKRQA
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP............................................
+s1:
+..........................................................................................................................................................................................SRVSNKISGGMACQTVVNHGYYLKPMTGNPYLCTQHDGVTTAYQQGFAPKDFNWLYRFRYNLLPQGMSGGFFSRNPYGRYVHWLEVSTIEKMRLQMFTMESVPCSVVSLILLVFTMWHSYRLAFLHPDITLYNLGLWSTKPWVQQQRFNKKKELDQDVYRWMTRVPEV..........MMDDPIREMYKMGIT.ANDPVYAMAKEQGVEHELTMTHAEYTSTSPDIRRVIANARK...............................................................................................................
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYT..ILCTGGYGRVYF...TTTSAKSCT.GDGTAMVARAGLPAEDMEFV.QFH....PTGI.........YGPGVLITERDVVS....RAITMEILKLPGISESAHIFA.....GVDVIVPTVH.YSMGGVPTL.WTGEV.ISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGE..ASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+.................................................................................................................................................................................................................................KLYASDFERAQF.PANIV.PSDSVTFAKFLYKAV...........EPKGSFDAILKDFQTIAAAIPKLPIFWERTVVVSEVNEFKSL..........SAPTIFTLEWMQSNGMLDLLPDVAEVYETYVSAKMK..RVTAKIYVAPGK....EQDRALVDKARKVAEQVVKDNKQLAGYTLVPKVLVDRSIVEGFAVDVVNEAVG.....................................................................
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+......................................................................................................................................................................................SGRLRLYKEKLEGYNRFYSIVKTIKMVTMAKFRQAQVRIKTRDYTLRYTEKAF.SKPGQLVGDSPQAKAIYIP..VMTNRGSCG.ALNSNVVKVIDSVASSRAY.....LMPLGKRGIESLSKLYPS...SFRMGIVNDMHEPMHFA..YATYVWENAQQLCPEADRVHIIFHR.CVSA.......GSQKQCYYNIPAYEKWKEDLVDASSTENQKSRYLFANTLLNEDEQMIRDFYDFHATLAILNAVCENELSEQAARLVAVEGQLSNISTLQQKTSSLYNKTRQSSITSSLIEIISAMTSLEGNAAKGVQRTN..................
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSK.......YTILCT.GGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTG..IYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGE...ASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSH...ALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDD..ANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+................................................................................................YTELSHMKFPVYYGAVGVVLGYFVVMWVVFLRMGSKHTARSEFKNDYLRVWRRRLGTGYEWADAWGPEMGT..FFKDLPEE.........................................................................................................................................................................................................................................................................................................................................
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFI..YQRAFGGQSIKQARRTCAASD......RTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+...........................................................................................................................DMHSSDRFKAAWDE...IPLHMLGASHKQMFEWYWRAMYQLGL..RDPYRLTKLRSMLNWAALFSFMYLTYISIFYSSFYHVYMMDWPEHFKRENAREYALSHGHDVWAGDGKFIRPYFH...INPPMLTMTSEDI....................................................................................................................................................................................................................................................
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFK.SKYTILCTGGYGRVYFTTTSA..KSCTGDGTAMVARAGLPAEDMEFVQ..FHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+...........................................................................................................................................................................................................................................................................................................................TYFYANCGETGISGATMQVLLKLTLACCVVQVFAIRYFVFQRLTTKKQFVEDSTDLWESDGTEMD......GEEAVANLRIQHERIMPFMNDIKDKLDAQ......................................................................................
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGAN.RLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALY..AEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+TMNFGNMTLGGAMATFGGQSNPMCNYTSPLAKKFVYKEVGKVHYPLRRHVFRTKVRTAAEIRFNEIVKRYMKEKMT.FKRGCYAATI...TNTVELDH.MGSIIPKDEYEVKRLTSYMTSKKMS....SDYKKHMQELWTRVLFVCESTNL..VGVTENAMHQNSRPGTDEEFMSIIWYSSFVTTLMAFVVTLFIWWYRYGQAPQYAEF.................................................................................................................................................................................................................................................................................................................................................
+s2:
+..........................................AYPVIDHTYDCVVVGAG....GSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASD.RTGHAMLHTLYGQSFQYG.VNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+.................................................................................................................................................................................................................................ELP.EAFEFIE.HK.........VTDKDIHSAYENMETLRLTVTRQDEFLFKETPVKCVTI.VGVNGENGVYPGHAYEITQLTPAPLTVEMPDGTVKKFFTSGGFAHINNEGSCDI.....NCVECI.........PLAELDLDAAEKALAQQQSALSSAHD.......EKAKAVIEIRIGVLESVIQSLKHMKE.................................................................................
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMAL...YAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+......................................................................................................................................................................................................................................................PLATLKPVLAESVATQNVIRRMIGVTTNRKVNASAINSVAEKTKGEGLAGTTAVVARAHLYLLSRNPTDAVAEIDAVLPKVQDEALRRFAIGIRLRSHNELLDMKEASLGVSG..................GATESEVSDLRSKLQ.KDYKELVTSSPGCWLVELAAAEYTLYTG..ASEEAYKSFSSIEKKIQEYIKAPIHVSELVATADNTNEFSLIGFQVRRARPGVKPEGVSASVAEGMANVMADPAAVKALQQAKKAFEEALELVVTLQEANVGHHFHDFFPTTPDHYDKWTSEAARSAQQLIQEALTPHSVGLKPEAIDRIRVSMTNKAFYDSEEKLHALLKSAPKDKSIIASIRETFGPGPSTPISSSDQAVADAVESVHLAVVSSDTAGATDYAKRGKEIAKALAKQLLYRTQVQKCVALTEMNCLQEAVDVVTPVIDANEYIYMWRAFLARSRAYKGLGLITNADKDLKELNRLKHSLTERTPYEKK
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITME..ILKLPGISESAHIFAGV..DVIVPTVHYSMGGVPTLWTGE...VISPRDGDDNAIVPGLL..AAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSH....ALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP.......................................................................................................................................................................................................................................
+s1:
+.............................................................................................................................................................................................MFWLCLVCLSVSHKMIGLCYLLVAILSGFVGYVYSLFIRLELSLIGCGIL....FGDYQFYNVLITSHGLIMVFAFIMPVMMGGLVNYFIPVMAGFPDMVFPRLNNMSFWMYLAGFGCVVNGFLTEEGMGVGWTLYPTLICIDFHSSLACDFVMFAVHLLGISSILNSINLLGTL.....FCCRRKFFSFLSWSLFIWAALITAILLIITLPVLAGGVTLILCDRNFNTSF..Y..DVVGGGDLILFQHIFWFFGHPEVYIILLPVFGLISTIVEVIGFRCVFSTVAMIYSMILIAILGMFVWAHHM.FVVGMDVDSRAYFGGVSILIGLPTCVKLFNWIYSFLYTDMIITFEVYFVIMFIFMFLIGAVTGLFLSNVGIDIMLHDTYFVVGHFHYVLSLGAVVGFFTGFIHFLAKWLPIELYLFWMFYFISTLFIGSNMLFFPMHSLGMYAFPRRISDYPVSFLFWSSFMLYGMLLLASLILFLCALFCVFLFWDYCLFFVSLFVFSLYCFFYFSTWLPCVMVLYLLLVDFAHIVLDYLFLILCFCFVFFIFFWQSLFLFFYI
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTG....GYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYG.PGVLITERDVVS.RAITMEILKLPGISESAHIFAGV.DVIVPTVH.....YSMGGVPTLWTGEVISPRDGDDNAIVPGLLAA...GECACASV.HGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILN...NKGDIPIARIRERMKETMALYAEDSMQTG.KNIIEECYRDFSHALVHD.KSPVWN..SNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP.......................................................................................................................................................................................................................................
+s1:
+................................................................................................................................................................................................................................................................................................................................................................................................................................ASCR...TGRLPMPDDPLFNSTHMHGLRHSSRIAGLGMIAVIWIMYEKLRHSHHYITYKGPENPFARIRHRRFPGGAFMFGWGNNGLNRDCGIKEFECWAGYTGKEYTYV
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMK.....HTLTYLDDANGTVRLAYR..PVHMEMLTNELESIPP.....................
+s1:
+VAKISSIERASTYLRFSTLRVHPHHEPNFRARPVGWKAWNSKQYMDPWAPYPL...TSPVRHVDRPFSGMWFGMGHFALKNFFGPLNWKFWARVSFFGTLGWAYSLSSYALRMHRNGWEWKNRGAVF.......................................................................................................................................................................................................................................................................................................................................................................................................................................
+s2:
+.................................................AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQG...GINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+..................................................................................................KVLIADLPMMWPSDMRRFEKEGGVWGQQFRQRRRQLTFALTISAASTLLGSWYVVMRRRN.TYFVLFSTFSGFSVLGFCIGMSLAPLWYENVANNK......ETSMMRRVWWAKECAKHWD...........................................................................................................................................................................................................................................................................................
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFG..GQSIKQARR..TCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+TPYQDKSYPVQPHNLDELQQPPDSWRKSPIMSKLMDQSLPVYDDVVTGVGRLYWQEPARVWHLFEADDTLMLEEHDREEWNDRPYVAVNHLYEPPIGSEERPIRVEGTGNPGDQQIVLCFGNCAPHVPQSNYYMMMKGYNKTKCPMCQQWFYIHNRPWLVMHPDWT.DEPAAD...EGPAYTFSEIEA...EFDRDFHEFGVYLNAE..........................................................................................................................................................................................................................................................................................................................................................................................
+s2:
+...................................................................................AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKL...YPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGF.IYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+.........................................................................................................................................................................................................................................................AEARAVLQAQSHRTVSAVVPGKMFMRHWIVAEQSTVSVVNRVISGMVAVFTMIWAAGYATLGYNGHNSAHVAGWIFIAYWVVLHTH.IMWLAPTML................................................................................................................................................................
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILK..LPGISESAHIFAGVDVIVPTVHYSMGGVPTLWT.....GEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+..........................................................................................................................................................................................................................................................................PG..QLANYSSPLYMYSHLIKNSTAKTPQLYTA.....KDNSKTAM.HLLTRRGATANYTVNRWYLKEKVDSSNRMRLEGLYECVLCASCTGSCPQYWWNREHFLGPAVLLQSYRWLVEPLDR...............DFDERVRMF.....ETG.TLVNMCHNIFNCSIT...CPKFLNPGLASKEIKRLSSPAAKRVGPAIE.....................................
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVH.........GANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+...............................................................................................................................................................................................................................................................................................................................................EDHRKYKVQREELPRMPHFNDFNDPRFCGTTNKQKNGILAYYQWLHCIGNWGE......EHSMCKKMRWYVERMMHETWLEKWEEKRALGHFDHTILYGVKP.WK.......EFEPLYQPVKKNRKGAYEYWLDRDFEPLYDADAADWREKAPILHDMFVLGKKPVA.
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPEL.RADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQ...TGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVR.MKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+.............................................................................................................................................................................................................................................................................................................................................................WPSKLPLTKNWYYHLS.RRD....SIADETRQYMVVGDFLLLFVVSFSMYRLYVLNRNNTYQTHLSHLI.....NYPPAIIANEFDFKDSNANRLVERKDLDAYREDVVRCRAS.....................................
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGD.IPIARIRERMKETMALYAEDSMQTG.KNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+....................................................................................................................................................................................................................................................................................YGHALELDTHNYKFNGEPPSWMKTHAKTEEETSFAKSVLPHIDFASSYECL.LFDADRLNTN......LNRKEFGNEIKYRLEKQANTVARAQQLLKDKKAGTGPDAAKIENTLIARIFDEEHVQAEMKYVKCIRANELAEDNRLDI...LPGGSPNSLREKTR.WNLN....TELHPADRAEIGARLTAWLPEKYHIVYFDDFQTVA..ANDATARREMLEIVESVQKEYTAEAKEGGYESDLKETVAELMDDVDPTRAITMEAIKSCKDLQQLEDWSRQVHEYNGDDRIIEIYARAAEITKNAEHQALVKQMREWRKLATK
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLW..TGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGR...KQPELRADAGEASIADLDRILNN..KGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP..............................................................................................
+s1:
+.............................................................................................................................................................................................................................................................................................................................................................................................................SLSTILYSPIGTSMMIMLAYNVIVICSKHVNYSLEITAKDYVQDQQLLTIMRYGILSCILLGMEVMFIEIG..................................
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAE..DSM..QTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+............................................................................................................................................................................................................................................PRPFGVWAPATTLAEYRA..........RIP..NPFAYSFKWVYSMKREVFY.....PPEALAHFKDPQQFKDAVDTVIAMRVSD....KIFGEGQKLPRHPVILMLMVLATHGFIIFSGLKYYYGTYMPANNPTWRKTVNKEWEEAINNSPWDHMSHVWQYSDEYAAALGDTAAPGQRKFYIPA...............................................................................
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKE..GRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+........................PATVKRPLWSLLLPQTYTSRIHTLAFHAPSILFMIAVCAIISKQSYYRSSLADEDPKTYDRIDRRAYVALPDGRMALVYPIIDTQTSFTRTVISFLDAVNPF..........................................................................................................................................................................................................................................................................................................................................................................................
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQG.GINAALANC....EEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQ.RAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+.............................................................................................................................................................................................................................................................................................IYTTWGSVPCEDWARNESWLKRITSQSDYRSFEFWHVPQADVPAGLRLNAVERYLLSSLENDTDRLLHVSWCEDFDPYWHDRVGSLEMLYKI....VYTNDYPLYRYIFGNC.MHKVAEKEYMLRKLNYLKSVLFWAGRTERCYTSIVKARYYVQRCVWNALERERYLCACVEAVDSFGKKVPEELRQKVMPELEVALVSMRHWV..WDCPNGKRTFTRRLA..................
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPT.......LWTGEVISPRDGDDNAI..VPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWN..............SNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANG....TVRLAYRPVHMEMLTNELESIPP
+s1:
+.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................SLADKIVRGPPKSVYYTHPRYVMSRDKMLHTIWVDIGIFQTCAYALFPFFSAAYFFK
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP..............................................
+s1:
+................................................................................................................................................................................................................................................................................TYMLAFNSKAKARPNFGLRGV.GYWTSEVYHK.........PGQNYWMVVCCAGPFLLVGAIMMDGFWSKLDDIAGGGPSA..LDYGWRSQDRKPWDFSFDIGEGYAAGPAVYRPASGAVDL............................................................................................................
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACAS...VHGANRL.GANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+................................................................................................................................................................KAVLQLVRFDPETNSSRVESYEYDKHHEYMVLDLLIAVKAHQDPTLAFRSSCCEGVCGS.CAMNINGINSLACITFAQHVTTVAPLPNFPVIKDFVVDLRHFFQQYAYIRPYVRNANLHRSQVDGIVERYNTVARVLSGVSPSEGRAMEKAQEELRETTVAALLRIADAAVDAGNATQALSVLEKVEQQ..GVVLDSTRVTEMIERALKNFAAKS..................................................................................................................................
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGY..GRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVS.RAITMEILKLPGISESAHIFAG.VDVIVP...TVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+................................................................................................................................................................YETFTPKTLSG..RLVMPGNINLLTVSPLYCAVLCIAAATWGVFYWDIYCRKNYE...TVLIARP....KDM..........................................................................................................................................................................................................................................................................
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+MFVRVIFVGVSGVFVFLSLPAICIVYLTFCLCGLFCIMFGSFIFIDYCFICFFACLLFCLVCLLCDLFVDSLRGLFDVCCFIRCIQYCFVWFIISELLLFLSLFYVVFSLVLFVSVEFAFVFVIPVMFSCLICDFGFVFYWYFIDIFNLLINTFLLFVSGLFVNFVLFLFWFRFFLCVLFMLWVGILFGFLFLWNQVWEFALLFVTCSCGVFGSILFLIDLLHFSHVFLGIFLLFLCFSRCFNFLCMDTRFVFLYVVCLYWHFVDCVWFFLLRFVYFDVLSVV......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
+s2:
+...............................................................................................................................................................................................................................................................AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+...............................................MFLGGFVPRRFTQLNRD..PWWMFFIFSVGAWIGEYPAMQIKYNARDLV...LDPHRYVWSHLDDHH................................................................................................................................................................................................................................................................................................................................................................................................
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+............................................................................................................................MGHEETTFSRGNRTRNNALQHIYGLMGLCGVGCVLALFSFVSGQRRIQTTITADGTMTKGTCPT...............................................................................................................................................................................................................................................................................................................................
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGV.......NFYN.EYYCLDLITEDG.CCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+......................................................................................................................................................MAFILSFWMIFLLDSVIVLLSFVCFVCVWICALLFSTVLLVSKLNNIYCTWDFTASKFIDVYWFTIGGMFSLGLLLRLCLLLYFGHLNFVSFDLCKVVGFQWYWVYFIFGETTIFSNLILESDYMIGDLRLLQCNHVLTLLSLVIYKLWLSAVDVIHSFAISSLGVKVDCIPGRCNEIVLFSSNNATVYGQCSELCGVLHGFMPIVICFI................................................................................................................................................................
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLIT..EDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTT...SAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGI.....YGPGVLITERDVVSRAITME..ILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWT....GEVISPRDGDDNAIV....PGLLAAGECA..CASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+......................................................................................................................................................................YTRWKCDR......IPVLQLKLFTQEYNIMALVGLLSMVFLFKHASYCSEETERKNGWWAGYP........YWRDPIARRNEIRYKQLINSNDVDITDPKWTGCSKEQ.................................................................................................................................................................................................................................
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVA.RAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+................................................................................................................................................................................................................................................................................TYMLAFNSKAKARPNFGLRGV.GYWTSEVYH.KPGQNYWMV..VCCAGPFL...LVGAIMMDGFWSKLDDIAGGGPSA..LDYGWRSQDRKPWDFSFDIGEGYAAGPAVYRPASGAVDL............................................................................................................
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRL.GANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+..............................................................................................................................................................................................................................................................................................................................TMNFGNMTLGGAMATFGGQSNPMCNYTSPLAKKFVYK..EVGKVHYPLRRHVFRTKVRTAAEIRFN......EIVKRYMKEKMTFKRGCYAATITNTVE.........LDHMGS.IIPKDEYEVKRLTSYMTSKKMS.SDYKKHMQELWTRVLFVCESTNLVGVTENAMHQNSRPGTDEEFMSIIWYSSFVTTLMAFVVTLFIWWYRYGQAPQYAEF
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLT...YLDDANGTVRLAYRPVHMEMLTNELESIPP..................................
+s1:
+....................................................................................................................................................................................................................................................................................YGHALELDTHNYKFNGEPPSWMKTHAKTEEETSFAKSVLPHIDFASSYECLLF.DADRLNTN......LNRKEFGNEIKYRLEKQANTVARAQQLLKDKKAGTGPDAAKIENTLIARIFDEEHVQAEMKYVKCIRANELAEDNRLDILPGGSPNSLREKTRWNLNTELHPADRAEIGARLTAWLPEKYHIVYFDDFQTVAANDATARREMLEIVESVQKEYTAEAKEGGYESDLKETVAELMDDVDPTRAITMEAIKSCKDLQQLEDWSRQVHEYNGDDRIIEIYARAAEITKNAEHQALVKQMREWRKLATK
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLW..TGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGR...KQPELRADAGEASIADLDRILNN..KGDIPIARIRERMKETMAL....YAEDS....MQTG.KNIIEECYRDFSHALVH..DKSPV......WNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRL.AYRPVHMEMLTNELESIPP..................................................................
+s1:
+......................................................................................................................................................................................................................................................................................................................................................FFGKGWDNAALDTIFSSMLRKPEVNDRIRTQYASTMD...PRDADVLRRLGEVSKENKTFIRVFLPPHL.GDPHRLLKCYSLMAYPILDDKGGQLKVEM.DGCKL.DAFADPDDDYSKVVIPHIELVEYLAKSLLETMKWEATPRGAASLLESLYRGAEIPDHVFQTPAVIERLEDYKDGNKVIS
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDI..PIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDAN.GTVRLAYRPVHMEMLTNEL...ESIPP.......................
+s1:
+.....................................................................................LHFPLSPPPIEIDYLDSDPLEFAVRTEARRWGFDDLQYMRELAFVRIKENPSIGDFRRMTPEERRDLFWGSD....RQDFFRYITLKLTGHPEHLYHRGW..................................................................................................................................................................................................................................................................................................................................
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPF.LRTK......DGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLI..TEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+TPYQDKSYPVQPHNLDELQQPPDSWRKSPIMSKLMDQSLPVYDDVVTGVGRLYWQEPARVWHLFEADDTLMLEEHDREEWNDRPYVAVNHLYE.PPIGSEERPIRVE.GTGNPGDQQIVLCFGNCAPHVPQSNYYMMMKGYNKTKCPMCQQWFYIHNRPWLVMHPDWT.DEPA....ADEGPAYT..FSEIEAEFDRDFHEFGVYLNAE..........................................................................................................................................................................................................................................................................................................................................................................................
+s2:
+...................................................................................AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYD..VACISKL...YPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGF.IYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+.............................................................................................................................................................................................MFWLCLVCLSVSHKMIGLCYLLVAILSGFVGYVYSLFIRLELSLIGCGIL....FGDYQFYNVLITSHGLIMVFAFIMPVMMGGLVNYFIPVMAGFPDMVFPRLNNMSFWMYLAGFGCVVNGFLTEEGMGVGWTLYPTLICIDFHSSLACDFVMFAVHLLGISSILNSINLLGTLFCC.....RRKFFSFLSWSLFIWAALITAILLIITLPVLAGGVTLILCDRNFNTSF..Y..DVVGGGDLILFQHIFWFFGHPEVYIILLPVFGLISTIVEVIGFRCVFSTVAMIYSMILIAILGMFVWAHHM.FVVGMDVDSRAYFGGVSILIGLPTCVKLFNWIYSFLYTDMIITFEVYFVIMFIFMFLIGAVTGLFLSNVGIDIMLHDTYFVVGHFHYVLSLGAVVGFFTGFIHFLAKWLPIELYLFWMFYFISTLFIGSNMLFFPMHSLGMYAFPRRISDYPVSFLFWSSFMLYGMLLLASLILFLCALFCVFLFWDYCLFFVSLFVFSLYCFFYFSTWLPCVMVLYLLLVDFAHIVLDYLFLILCFCFVFFIFFWQSLFLFFYI
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTG....GYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYG.PGVLITERDVVS.RAITMEILKLPGISESAHIFAGV.DVIVPTVH.....YSMGGVPTLWTGEVISPRDGDDNAIVPGLLAA...GECACASV.HGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNN...KGDIPIARIRERMKETMALYAEDSMQTG.KNIIEECYRDFSHALVHD.KSPVWN..SNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP.......................................................................................................................................................................................................................................
+s1:
+MFVRVIFVGVSGVFVFLSLPAICIVYLTFCLCGLFCIMFGSFIFIDYCFICFFACLLFCLVCLLCDLFVDSLRGLFDVCCFIRCIQYCFVWFIISELLLFLSLFYVVFSLVLFVSVEFAFVFVIPVMFSCLICDFGFVFYWYFIDIFNLLINTFLLFVSGLFVNFVLFLFWFRFFLCVLFMLWVGILFGFLFLWNQVWEFALLFVTCSCGVFGSILFLIDLLHFSHVFLGIFLLFLCFSRCFNFLCMDTRFVFLYVVCLYWHFVDCVWFFLLRFVYFDVLSVV......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
+s2:
+...............................................................................................................................................................................................................................................................AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+VAKISSIERASTYLRFSTLRVHPHHEPNFRARPVGWKAWNSKQYMDPWAPYPL...TSPVRHVDRPFSGMWFGMGHFALKNFFGPLNWKFWARVSFFGTLGWAYSLSSYALRMHRNGWEWKNRGAVF.......................................................................................................................................................................................................................................................................................................................................................................................................................................
+s2:
+.................................................AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQG...GINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+...........................................................................................................................DMHSSDRFKAAWDE...IPLHMLGASHKQMFEWYWRAMYQLGL..RDPYRLTKLRSMLNWAALFSFMYLTYISIFYSSFYHVYMMDWPEHFKRENAREYALSHGHDVWAGDGKFIRPYFH...INPPMLTMTSEDI....................................................................................................................................................................................................................................................
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFK.SKYTILCTGGYGRVYFTTTSA..KSCTGDGTAMVARAGLPAEDMEFVQ..FHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+......................................................................................................................................................MAFILSFWMIFLLDSVIVLLSFVCFVCVWICALLFSTVLLVSKLNNIYCTWDFTASKFIDVYWFTIGGMFSLGLLLRLCLLLYFGHLNFVSFDLCKVVGFQWYWVYFIFGETTIFSNLILESDYMIGDLRLLQCNHVLTLLSLVIYKLWLSAVDVIHSFAISSLGVKVDCIPGRCNEIVLFSSNNATVYGQCSELCGVLHGFMPIVICFI................................................................................................................................................................
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLIT..EDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTT...SAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGI.....YGPGVLITERDVVSRAITME..ILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWT....GEVISPRDGDDNAIV....PGLLAAGECA..CASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+..........................................................................................................................................................................................SRVSNKISGGMACQTVVNHGYYLKPMTGNPYLCTQHDGVTTAYQQGFAPKDFNWLYRFRYNLLPQGMSGGFFSRNPYGRYVHWLEVSTIEKMRLQMFTMESVPCSVVSLILLVFTMWHSYRLAFLHPDITLYNLGLWSTKPWVQQQRFNKKKELDQDVYRWMTRVPEV..........MMDDPIREMYKMGIT.ANDPVYAMAKEQGVEHELTMTHAEYTSTSPDIRRVIANARK...............................................................................................................
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYT..ILCTGGYGRVYF...TTTSAKSCT.GDGTAMVARAGLPAEDMEFV.QFH....PTGI.........YGPGVLITERDVVS....RAITMEILKLPGISESAHIFA.....GVDVIVPTVH.YSMGGVPTL.WTGEV.ISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGE..ASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+...........................................................................................................................................................................................................................................................................................................................TYFYANCGETGISGATMQVLLKLTLACCVVQVFAIRYFVFQRLTTKKQFVEDSTDLWESDGTEMD......GEEAVANLRIQHERIMPFMNDIKDKLDAQ......................................................................................
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGAN.RLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALY..AEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+................................................................................................YTELSHMKFPVYYGAVGVVLGYFVVMWVVFLRMGSKHTARSEFKNDYLRVWRRRLGTGYEWADAWGPEMGT..FFKDLPEE.........................................................................................................................................................................................................................................................................................................................................
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFI..YQRAFGGQSIKQARRTCAASD......RTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+EDHRKYKVQREELPRMPHFNDFNDPRFCGTTNKQKNGILAYYQWLHCIGNW..GEEHSMCKKMRWYVERMMHETWLEKWEEKRALGHFDHT.....ILYGVK..PW..KEFEPLYQPVKKNRKG.AYEYWLD.RDFEPLYDADAADWREKAPILHDMFVLGKKPVA.......................................................................................................................................................................................................................................................................................................................................................
+s2:
+...........AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+................................................................................................................................................................................................................................................................................................................................................................................................................................ASCR...TGRLPMPDDPLFNSTHMHGLRHSSRIAGLGMIAVIWIMYEKLRHSHHYITYKGPENPFARIRHRRFPGGAFMFGWGNNGLNRDCGIKEFECWAGYTGKEYTYV
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMK.....HTLTYLDDANGTVRLAYR..PVHMEMLTNELESIPP.....................
+s1:
+............................................................................................................................................................................................................................................PRPFGVWAPATTLAEYRAR..........IP..NPFAYSFKWVYSMKREVFY.....PPEALAHFKDPQQFKDAVDTVIAMRVSD....KIFGEGQKLPRHPVILMLMVLATHGFIIFSGLKYYYGTYMPANNPTWRKTVNKEWEEAINNSPWDHMSHVWQYSDEYAAALGDTAAPGQRKFYIPA...............................................................................
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKE..GRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+........................................................................................................................................................................................................................................................MLRRHAYKTAACVTAIQ...VARAVHSIAVLQNSTPATTAQKLGSVVSKEEVAAVNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLIAT..ITD.EVDYTSIEQQVAKRFSKDPSKLQPTPGALKHFRENNWKDMKSLITFYEETMYPIRMKHKEYKYHELTSFHIKDVLKRGLSAFKQSYLDEQREEQTKVKAYMKSCDDFVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNL.MRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVGTASLENISDEVLKLISNRHQTPLDDGVLIRSPDTHPNLQRSPE
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVP.TVHYSMGGVPTLWTGEVIS..PRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRK.QPELRA..DAGEASIADLDRILNNKGD....IPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSH.ALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRM.........KHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP.................................................................
+s1:
+MLRRTFTRLALSRAYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIHYGGKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITEGARGEGGYLVNSEGERFMERYAPKAKDLASRDVVSRAITMEILAGRGCGPKKDHVMLQLHHLDPATLHKKLPGISESAHIFAGVDVTKEPIPIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAAVFRTEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRKESRGAHARDDYQERDDHNWMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPPAKRVY
+s2:
+.............AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSI....KQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITE..............................RDVVSRAITMEIL..........................KLPGISESAHIFAGVDV......IVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYA.....EDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVR....................MKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP.....
+> matchmaker #9/K5 to #1.2/K5
+Computing secondary structure
+Parameters
+---
+Chain pairing | bb
+Alignment algorithm | Needleman-Wunsch
+Similarity matrix | BLOSUM-62
+SS fraction | 0.3
+Gap open (HH/SS/other) | 18/18/6
+Gap extend | 1
+SS matrix |  |  | H | S | O
+---|---|---|---
+H | 6 | -9 | -6
+S |  | 6 | -6
+O |  |  | 4
+Iteration cutoff | 2
+Matchmaker combination, chain K5 (#1.2) with chainK5.cif, chain K5 (#9),
+sequence alignment score = 2215.7
+RMSD between 387 pruned atom pairs is 1.201 angstroms; (across all 498 pairs:
+.475)
+Computing secondary structure
+s1:
+............................................................................................................................................................................................................................................................................ASKEEQIKKNTKIAIEMIRRYKGETPMSYTRKHTATIEQLEREIEALLGGAQKMRKATTD.......DQPMDKLGLMERCLRHALWSYHKDEGKYDFDEIARWVVYTPEDEVKLAQMKRQVEAKSKLAAYRAKRAEQ......GLPEAPVPQISWEEEYKNVTDRELVNEKRLRYDTIAANTMERDEAQIEAVLQQYRKPIQDKRLDDLVDLLERFKPVLAREAIMQRLTIKHLEGQLGVWRYMDWCPEVRDRAELEVDISGFQWWSPLEERRLLPVRLRSVNEVREIMAQTQSSKAAEASAHSPQASQSAGDGDRERLLKEVLALQARIHQRDDAP
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQ..PELR.....ADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSH.ALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLT.NELESIPP..................................................................................................
+s1:
+.......................................................................................................................................................................................PAEHKGRVGYVSQVIGAVVDVHFS.........EGVPPVLTALDVTEDLG..RDEPLTLE....IVQHLDANTGRCIAMQTTDLLKL.KSKVVSTGGNISVPVGRETLGRIFNV.LGDAIDQRG...........PVGEKMRMAIHAEAPKLADQAAEDTILTTGIKVIDLILPYCKGG..KIGLFGGAGVGKTVIIMELINNVAKGHGGFSVFAGVGERTREGTDLYLEMMQSKVIDLKGDSKCVLVYGQMNEPPGARARVAQSALTMAEYFRDVEGQNVLLFIDNIFRFTQANSEVSALLGRIPAAVGYQPTLAEDLGMLQERITSTTKGSITSVQAVYVPADDITDPAPATTFSHLDATTVLDRAVAESGIYPAVNPLECASRIMDPDVIDVNHYNVAQDIVQMLTKYKELQDIIAVLGIDELSEEDKVVVDRARKVTRFLSQPFQVAEVFTGMTGHYVQLNDTVESFSGLLMGSYDQIPEMAFYMVGGINSVLEKAKAMAEEAAAMEK
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDV.VSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHG.ANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNN..KGD...IPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHD....KSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLA..YRPVHMEMLTNELESIPP........................................................................................................................................................................................
+s1:
+......................................................................................................................................................................................................................................................................................................................................................FFGKGWDNAALDTIFSSMLRKPEVNDRIRTQYASTMD...PRDADVLRRLGEVSKENKTFIRVFLPPHL.GDPHRLLKCYSLMAYPILDDKGGQLKVEM.DGCKLD.AFADPDDDYSKVVIPHIELVEYLAKSLLETMKWEATPRGAASLLESLYRGAEIPDHVFQTPAVIERLEDYKDGNKVIS
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDI..PIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYL.DDANGTVRLAYRPVHMEMLTNEL...ESIPP.......................
+s1:
+..........................................................................................................................................................................................................KATEMIGYVHSIDGTIATLIPAPGNPGVAYNTIIMIQVSPTTFAAGLVFNLEKDGRIGIILMD..NITEVQSGQKVMATGKLLYIPV......GAGVL..GKVVNPLGHE....VPVGLQTLGKVDAGAPNIVSRSPVNYNL...LTGFKAVDTMI....PIGRGQRELIVGDRQTGKTSIAVSTIINQVRNNQQIL....SKNAVISIYVSIGQRCSNVARIHRLLRSYG.ALRY..TTVMAATAAEPAGLQYLAPYSGVTMGEYFMNRGRHCLCVYDD.LSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAAMLSPGKGGGSVTALPIVETLSNDVTAYIVTNVISITDGQIYLDTKLFTGGQRPAVNIGLSVSRVGSSAQNVAMKAVAGKLKGILAEYRKLAADQVQTVPMIRGARFVALFNQKNPSFFMNALVSLYACLNGYLDDVKVNYAKLYEYLLVNKDLSVMYGTATNKFFYMYVQQLNYVIRFFTLNHPILNAEVEEMLKQHTHLFLQHYQSKMNAIKTEKEIKALKNLLYSCKRAV
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPA...EDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFA.GVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVP.GLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPEL...RADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQ.TGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVV.RMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP.......................................................................................................................................................................................................................................................
+s1:
+.........................................................................................................................................................................................EHKGRVGYVSQVIGAVVDVHFS.........EGVPPVLTALDVTEDLGRDEPLTLEIVQHLDANTGRCIAMQ..TTDLLKL....KSKVVSTGGNISVPVGRETLGRIFNV.LGDAIDQRG...........PVGEKMRMAIHAEAPKLADQAAEDTILTTGIKVIDLILPYCKGG..KIGLFGGAGVGKTVIIMELINNVAKGHGGFSVFAGVGERTREGTDLYLEMMQSKVIDLKGDSKCVLVYGQMNEPPGARARVAQSALTMAEYFRDVEGQNVLLFIDNIFRFTQANSEVSALLGRIPAAVGYQPTLAEDLGMLQERITSTTKGSITSVQAVYVTDPAPATTFSHLDATTVLDRAVAESGIYPAVNPLECASRIMDPDVIDVNHYNVAQDIVQMLTKYKELQDIIAVLGIDELSEEDKVVVDRARKVTRFLSQPFQVAEVFTGMTGHYVQLNDTVESFSGLLMGSYDQIPEMAFYMVGGINSVLEKAKAMAEEAAAMEKQRRAR
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHG.ANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNN..KGD...IPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHD....KSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLA..YRPVHMEMLTNELESIPP........................................................................................................................................................................................
+s1:
+........................................................................................................................................................................................................KGRVGYVSQVIGAVVDVHFSEGVPPVLTALDVTEDLGRDEPLTLEIVQHLDANTGRCIAMQ..TTDLLKL....KSKVVSTGGNISVPVGRETLGRIFNV.LGDAIDQRG...........PVGEKMRMAIHAEAPKLADQAAEDTILTTGIKVIDLILPYCKGGKI..GLFGGAGVGKTVIIMELINNVAKGHGGFSVFAGVGERTREGTDLYLEMMQSKVIDLKGDSKCVLVYGQMNEPPGARARVAQSALTMAEYFRDVEGQNVLLFIDNIFRFTQANSEVSALLGRIPAAVGYQPTLAEDLGMLQERITSTTKGSITSVQAVYVPADDITDPAPATTFSHLDATTVLDRAVAESGIYPAVNPLECASRIMDPDVIDVNHYNVAQDIVQMLTKYKELQDIIAVLGIDELSEEDKVVVDRARKVTRFLSQPFQVAEVFTGMTGHYVQLNDTVESFSGLLMGSYDQIPEMAFYMVGGINSVLEKAKAMAEEAAAMEENKAAH
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCT....GDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHG.ANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNN..KGD...IPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHD....KSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLA..YRPVHMEMLTNELESIPP.............................................................................................................................................................................................
+s1:
+KYDLFGYEVDTNTAPWIEKVKKCR.YYDEAGEVLVSMNVKNCPPDLETYNATLQKIFEAPSKQEKPVENESKFCAMMDLMEEMQHRNKVKPNEESWTWVMKECVQSGQFRLGYCVAKLMEAEF.............KRVPEDLVKQNEANAAKAKADGKEHPSTLAQQQSLFDIKIQ....................................................................................................................................................................................................................................................................................................................................................
+s2:
+............AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDV....ACISKLY..PSRS.HTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+.....................................................................................LHFPLSPPPIEIDYLDSDPLEFAVRTEARRWGFDDLQYMRELAFVRIKENPSIGDFRRMTPEERRDLFWGSD....RQDFFRYITLKLTGHPEHLYHRGW..................................................................................................................................................................................................................................................................................................................................
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPF.LRTK......DGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLI..TEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+....................................................................................................................................................................................................................................ASDLKMVSLHKILI...GEVQFRNNALLKACNIEHNFGPTWKSEIEAYA...KSLPAEEKNCLERQIARVSMTRYTTRELAEYCGEGPEHVDAVAREANIAQAKVYAQKNGADKLETYVKAEAKNAGWSEAETKKFMDAVKAAK........................................................................................................................................
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPT.....VHYSMGGVP.TLWTGEVISPRDGDDNAIVPGLLAAGECACASVH....GANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+AKKYDLFGYEVDTNTAPWIEKVKKCR.YYDEAGEVLVSMNVKNCPPDLETYNATLQKIFEAPSKQEKPVENESKFCAMMDLMEEMQHRNKVKPNEESWTWVMKECVQSGQFRLGYCVAKLMEAEF.............KRVPEDLVKQNEANAAKAKADGKEHPSTLAQQQSLFDIKIQ....................................................................................................................................................................................................................................................................................................................................................
+s2:
+..............AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDV....ACISKLY..PSRS.HTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+.....................................................................................................................................................................................................TEMIGYVH.......SIDGTIATLIPAPGNPGVAYNTIIMIQVSPTTFAAGLVFNLEKDGRIGIILMD..NITEVQSGQKVMATGKLLYIPV......GAGVL..GKVVNPLGHE....VPVGQTLGKVDAGAPNIVSRSPVNYNL...LTGFKAVDTMI....PIGRGQRELIVGDRQTGKTSIAVSTIINQVRNNQQIL....SKNAVISIYVSIGQRCSNVARIHRLLRSYG.ALRY..TTVMAATAAEPAGLQYLAPYSGVTMGEYFMNRGRHCLCVYDDL.SKQAVAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAAMLSPGKGGGSVTALPIVETLSNDVTAYIVTNVISITDGQIYLDTKLFTGGQRPAVNIGLSVSRVGSSAQNVAMKAVAGKLKGILAEYRKLAADVQTVPMIRGARFVALFNQKNPSFFMNALVSLYACLNGYLDDVKVNYAKLYEYLLVNKDLSVMYGTATNKFFYMYVQQLNYVIRFFTLNHPILNAEVEEMLKQHTHLFLQHYQSKMNAIKTEKEIKALKNLLYSCKRAV
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPA...EDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFA.GVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPEL...RADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQ.TGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVV.RMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP......................................................................................................................................................................................................................................................
+s1:
+GAKKYDLFGYEVDTNTAPWIEKVKKCRYYDEAGEVLVSMN.VKNCPPDLETYNATLQKIFEAPSKQEKPVENESKFCAMMDLMEEMQHRNKVKPNEESWTWVMKECVQSGQFRLGYCVAKLMEAE...FKRVPEDLVKQNEANAAKAKADGK....EHPSTLAQQQSLFDIKIQ..........................................................................................................................................................................................................................................................................................................................................................
+s2:
+...............AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDV....ACISKLY..PSRS.HTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+..........................................................................................................................................................................................................................SIAVIAAGAPAALLQAVSSILSKATGGAVKATQATSAASNAVVV......GMQAPRGVYACVAEPPSTASGPYAGVKTV.VVRAILPRSAPDT......................MQVRDILDVYPASGIACEKETAEAVKNFTKAAKVAVEKAKAMKATRVTLVM.KPATKYERLNGLFRETCTKTIEAA...GLSVETSTTAAATNTLI..MFPEKMSVVMVSDD..PVCENVQYAYAGAVGGV.HTTYYTDSGNKIYGGHSYRSVAM.ALAEELKSLGMKAEAAKVEAAVQKSPRNAAAAM
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITE.RDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTV.RLAYRPVHMEMLTNELESIPP......................
+s1:
+...................................................................................................ISIQGLHYVGTGLGAIALGGVGMGIGTIFGCLLIACARQPNLTKMLFNYAILGFALTEAIGLFALMLAFLMLFS.........................................................................................................................................................................................................................................................................................................................................
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFG...GQSIKQARRTCAAS.DRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+...................................................................................................ISIQGLHYVGTGLGAIALGGVGMGIGTIFGCLLIACARQPNLTKMLFNYAILGFALTEAIGLFALMLAFLMLFS.........................................................................................................................................................................................................................................................................................................................................
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFG...GQSIKQARRTCAAS.DRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+...................................................................................................ISIQGLHYVGTGLGAIALGGVGMGIGTIFGCLLIACARQPNLTKMLFNYAILGFALTEAIGLFALMLAFLMLFS.........................................................................................................................................................................................................................................................................................................................................
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFG...GQSIKQARRTCAAS.DRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+...................................................................................................ISIQGLHYVGTGLGAIALGGVGMGIGTIFGCLLIACARQPNLTKMLFNYAILGFALTEAIGLFALMLAFLMLFS.........................................................................................................................................................................................................................................................................................................................................
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFG...GQSIKQARRTCAAS.DRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+....................................................................................................SIQGLHYVGTGLGAIALGGVGMGIGTIFGCLLIACARQPNLTKMLFNYAILGFALTEAIGLFALMLAFLMLFS.........................................................................................................................................................................................................................................................................................................................................
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFG...GQSIKQARRTCAAS.DRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+...................................................................................................ISIQGLHYVGTGLGAIALGGVGMGIGTIFGCLLIACARQPNLTKMLFNYAILGFALTEAIGLFALMLAFLMLFS.........................................................................................................................................................................................................................................................................................................................................
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFG...GQSIKQARRTCAAS.DRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+...................................................................................................ISIQGLHYVGTGLGAIALGGVGMGIGTIFGCLLIACARQPNLTKMLFNYAILGFALTEAIGLFALMLAFLMLFS.........................................................................................................................................................................................................................................................................................................................................
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFG...GQSIKQARRTCAAS.DRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+...................................................................................................ISIQGLHYVGTGLGAIALGGVGMGIGTIFGCLLIACARQPNLTKMLFNYAILGFALTEAIGLFALMLAFLMLFS.........................................................................................................................................................................................................................................................................................................................................
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFG...GQSIKQARRTCAAS.DRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+...................................................................................................ISIQGLHYVGTGLGAIALGGVGMGIGTIFGCLLIACARQPNLTKMLFNYAILGFALTEAIGLFALMLAFLMLFS.........................................................................................................................................................................................................................................................................................................................................
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFG...GQSIKQARRTCAAS.DRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+...................................................................................................ISIQGLHYVGTGLGAIALGGVGMGIGTIFGCLLIACARQPNLTKMLFNYAILGFALTEAIGLFALMLAFLMLFS.........................................................................................................................................................................................................................................................................................................................................
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFG...GQSIKQARRTCAAS.DRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+.........................................................................................................................................................................................................................YTPSEELKKLYASDFERAQF.PANIV.PSDSVTFAKFLYKAV...........EPKGSFDAILKDFQTIAAAIPKLPIFWERTVVVSEVNEFKSL..........SAPTIFTLEWMQSNGMLDLLPDVAEVYETYV......SAKMKRVTAKIYVAPGKEQDRALVDKARKVAEQVVKDNKQLAGYTLVPKVLVDRSIVEGFAVDVQGTYVNEAVGRKIETEVLRKYLDSLSLY.DAEELKSGV.......................................
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDK..SPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+..............................................................................................................................................................................................................................................................................................................................................................................................................................................VALNWRDHGISYVKYLNVATEALHMATKDKARAKYSRFSTPNYIALVKKVPAFT................
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRL..AYRPVHMEMLTNELESIPP
+s1:
+............................................................................................................................................................................................................FFKATEMIGYVHSIDGTIATLIPAPGNPGVAYNTIIMIQVSPTTFAAGLVFNLEKDGRIGIILMD..NITEVQSGQKVMATGKLLYIPV......GAGVL..GKVVNPLGHE....VPVGLQTLGKVDAGAPNIVSRSPVNYNL...LTGFKAVDTMI....PIGRGQRELIVGDRQTGKTSIAVSTIINQVRNNQQIL....SKNAVISIYVSIGQRCSNVARIHRLLRSYG.ALRY..TTVMAATAAEPAGLQYLAPYSGVTMGEYFMNRGRHCLCVYDD.LSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAAMLSPGKGGGSVTALPIVETLSNDVTAYIVTNVISITDGQIYLDTKLFTGGQRPAVNIGLSVSRVGSSAQNVAMKAVAGKLKGILAEYRKLAAQTVPMIRGARFVALFNQKNPSFFMNALVSLYACLNGYLDDVKVNYAKLYEYLLVNKDLSVMYGTATNKFFYMYVQQLNYVIRFFTLNHPILNAEVEEMLKQHTHLFLQHYQSKMNAIKTEKEIKALKNLLYSCKRAVG
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTS....AKSCTGDGTAMVARAGLPA...EDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFA.GVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVP.GLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPEL...RADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQ.TGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVV.RMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP.....................................................................................................................................................................................................................................................
+s1:
+..............................................................................................................................................................................LSLLLCVHFSAIHRPPPPVPFTALAAFLYALT.LTAPVAEQRSGSSLHPQIEVGTEIEDMALFHLVVLPLVFFAAMCIGRG.....................................................................................................................................................................................................................................................
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKS..KYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+...............................................................................................................................................................................................................................................................................QMKVELTMQYLDEWMLRWRKFQTESDWQIEKNRQWWRKANIVTAGAVMGGLVMYTAGNATIRRQFGAPHFFDIGVDGK.LKEAICDTMTSRWRYTPQGYGRVMLVGLPTFFVFAISEHIQERRRLRAYVRQN.TVFGEQARRLVQNGK.IEEYLAVDIKASLPQNQTQLYAG.............................................................
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVP.TVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANR..LGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDS...MQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+.........................................................................................................................................................................................................NMFLFKDPVRRPQLSPEERAKVKINYAEWPEEFRDYDPDDPYKNSPEIIE......GLSSWNLFLWGV.ECAFIYQFYEVVFPKS....................................................................................................................................................................................................................
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+...................................................................................................................................................................................................................................................................................................................................................................................................NPVDHFRPNL.KFLSVYVE.....HQYVVDKWLHVKENWLKPWYLPWW.TPMYQAMTWYSQRNRNLMLVENHLNYRPYRYRRNDEDRENPY....................
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+........................................................................................................................................................................................................................................................................................VFFSTYRSKRIVAPGFLKGPVMASRAFFDYYFQRAWCGCVQWVIPGEVRLWACGVPVIYFIHRYHNDHSLEPDFVEKAMIQRWGGSL.EEVRKLSPQDQLRIRAFTDLEKLYSAYGPKDTIVQPPGDLLPGKDYYH......................................................................................................
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDD...........NAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRK...QPELRADAGE......ASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+GTWSVLKKNCLNFVPGLALFASQSRDAFATWMKIYNRGYKYGPQEFSDQAEAYTPDYWKRGHSQEKNMWVDMKLSEEVSQKELAQLMHYKQDLWRMGHGLGLSLFLGGYALIPAFFCLSSDTFAPSCFCKTEEEKKAWREAQDMYRYRSAPSYIMDTKWHFD..FHAYPWNATQERAWDDLFEKNNVRRDPKVL.RPAAEMYDGFLKFYQIRRKSLRHLARSMNLP..TFPLLSRTCASTRVKDYWNLAWNEDYMVIT...QKLHHQMSDEDLHDYAWRRFLAPY....DKNLSRDEIMTRVNDYHEFLGPKFVEEGKAP..NMIILTNYVLGYYNDPAYLVE..........DISALDGNDFEYMAHYGKDAFLRRLEFENG..PLRDQVEAHTQKLIADRAAAAAAEA....................................................................................................................................................................................
+s2:
+...........................................................................................AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQ.YGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+HLEPMSVWYLSSWTCVWWYSFFFWLPVLWADMIVPSFVYNKLPVIHFIQEKRAEQKLRRVLDETYTQ.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
+s2:
+........................................................AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+...................................................................................................................HPPKLEDIPPSSATKGFFGAYMARLIDIKWMMNRSVELGREYYISAPTLYLFLWMFCWKGFVIMRYGDGKPP.......................................................................................................................................................................................................................................................................................................................
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+.................................................................................................................................................................................................................................................................................................................................................................................................................................................VGNGPTFHTAGDNN.NTSEIQNAFPINERGIRSSSPFPEPNTAIYDSYMPWTYFQPIDVKVDKMPAPEAKYYQHHTKKPWDVSTTDLIEIQSRKKYVQGVGYFLMMIYLYFLMPKEKSYSGTTGSDGFYVMLPKNQPEKFV
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRP.VHMEMLTNELESIPP...........................................................................
+s1:
+................................................................................................................................................................................................................................................................................................................................................................................................................MFVFFVCDLVIMRILLCFCYSVWSRIIFVLFYNVFYICTELMFCIFDVYLFVGLCMFICLWFVLFNFYGLIVY..YCITYLNVYILFCIVFMYYMAFLFCFCFLLDFILFGSLLVGDAFMDVFFLRYLLCVLECFSLLCRCISTFLRMFCNLLSSHFLMLMFCDFVYFFIIFFLFFIMCDFIYFIIFTFAMLFCIIFYLFLYALDMFCALLQIFIFCNMIMQLIMDFLLLLSFHG
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSH...ALVHD........KSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDD.ANGTVRLAYRPVHMEMLTNELESIPP.............................................................................................................................
+s1:
+................................................................................................................................................................................................FTVPVALCTKQVAAMDEPLKRHIDAYEARGEDVTIAVWREYVDGQRALLPYRWAKFRNEVTYLTSG....QIALTDLAFADLLLFVRFLTKCLFIFIVAVMAGRRSVFPSLE......PTSPFVEEIVKNWQPNRLRRVAGAEYMARDQAAAAAAAAA........................................................................................................................................................................
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTI...LCT...GGYGRVYFTTTSAKSCTGDGTAMVA........RAGLPAEDMEF...VQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTL.WTGEVISPRDGDDNAIVPG..LLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+..................................PKTLNQFRNFSYIVVAWLGFNKGFREKAANDAEWIAHQQRVRQQNVERHQAASAMMEA......................................................................................................................................................................................................................................................................................................................................................................................................................
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+...........................................................................................VAPKTLNQFRNFSYIVVAWLGFNKGFREKAANDAEWIAHQQRVRQQNV..........................................................................................................................................................................................................................................................................................................................................................................
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMG...LPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+...................................................................................................................................................................................................................................................................................................................................................................................................................................................................AFHDVSTDAIRQMQASEALQKHLENAQLAHRVCVAKALKAD...EPPVEKCALTWGEVVMRYNQWSEYRPAFHDSDAQKRYSKYWTKKRQA
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP............................................
+s1:
+..........................................................................................................................................................................................SRVSNKISGGMACQTVVNHGYYLKPMTGNPYLCTQHDGVTTAYQQGFAPKDFNWLYRFRYNLLPQGMSGGFFSRNPYGRYVHWLEVSTIEKMRLQMFTMESVPCSVVSLILLVFTMWHSYRLAFLHPDITLYNLGLWSTKPWVQQQRFNKKKELDQDVYRWMTRVPEV..........MMDDPIREMYKMGIT.ANDPVYAMAKEQGVEHELTMTHAEYTSTSPDIRRVIANARK...............................................................................................................
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYT..ILCTGGYGRVYF...TTTSAKSCT.GDGTAMVARAGLPAEDMEFV.QFH....PTGI.........YGPGVLITERDVVS....RAITMEILKLPGISESAHIFA.....GVDVIVPTVH.YSMGGVPTL.WTGEV.ISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGE..ASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+.................................................................................................................................................................................................................................KLYASDFERAQF.PANIV.PSDSVTFAKFLYKAV...........EPKGSFDAILKDFQTIAAAIPKLPIFWERTVVVSEVNEFKSL..........SAPTIFTLEWMQSNGMLDLLPDVAEVYETYVSAKMK..RVTAKIYVAPGK....EQDRALVDKARKVAEQVVKDNKQLAGYTLVPKVLVDRSIVEGFAVDVVNEAVG.....................................................................
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+......................................................................................................................................................................................SGRLRLYKEKLEGYNRFYSIVKTIKMVTMAKFRQAQVRIKTRDYTLRYTEKAF.SKPGQLVGDSPQAKAIYIP..VMTNRGSCG.ALNSNVVKVIDSVASSRAY.....LMPLGKRGIESLSKLYPS...SFRMGIVNDMHEPMHFA..YATYVWENAQQLCPEADRVHIIFHR.CVSA.......GSQKQCYYNIPAYEKWKEDLVDASSTENQKSRYLFANTLLNEDEQMIRDFYDFHATLAILNAVCENELSEQAARLVAVEGQLSNISTLQQKTSSLYNKTRQSSITSSLIEIISAMTSLEGNAAKGVQRTN..................
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSK.......YTILCT.GGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTG..IYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGE...ASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSH...ALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDD..ANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+................................................................................................YTELSHMKFPVYYGAVGVVLGYFVVMWVVFLRMGSKHTARSEFKNDYLRVWRRRLGTGYEWADAWGPEMGT..FFKDLPEE.........................................................................................................................................................................................................................................................................................................................................
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFI..YQRAFGGQSIKQARRTCAASD......RTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+...........................................................................................................................DMHSSDRFKAAWDE...IPLHMLGASHKQMFEWYWRAMYQLGL..RDPYRLTKLRSMLNWAALFSFMYLTYISIFYSSFYHVYMMDWPEHFKRENAREYALSHGHDVWAGDGKFIRPYFH...INPPMLTMTSEDI....................................................................................................................................................................................................................................................
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFK.SKYTILCTGGYGRVYFTTTSA..KSCTGDGTAMVARAGLPAEDMEFVQ..FHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+...........................................................................................................................................................................................................................................................................................................................TYFYANCGETGISGATMQVLLKLTLACCVVQVFAIRYFVFQRLTTKKQFVEDSTDLWESDGTEMD......GEEAVANLRIQHERIMPFMNDIKDKLDAQ......................................................................................
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGAN.RLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALY..AEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+TMNFGNMTLGGAMATFGGQSNPMCNYTSPLAKKFVYKEVGKVHYPLRRHVFRTKVRTAAEIRFNEIVKRYMKEKMT.FKRGCYAATI...TNTVELDH.MGSIIPKDEYEVKRLTSYMTSKKMS....SDYKKHMQELWTRVLFVCESTNL..VGVTENAMHQNSRPGTDEEFMSIIWYSSFVTTLMAFVVTLFIWWYRYGQAPQYAEF.................................................................................................................................................................................................................................................................................................................................................
+s2:
+..........................................AYPVIDHTYDCVVVGAG....GSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASD.RTGHAMLHTLYGQSFQYG.VNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+.................................................................................................................................................................................................................................ELP.EAFEFIE.HK.........VTDKDIHSAYENMETLRLTVTRQDEFLFKETPVKCVTI.VGVNGENGVYPGHAYEITQLTPAPLTVEMPDGTVKKFFTSGGFAHINNEGSCDI.....NCVECI.........PLAELDLDAAEKALAQQQSALSSAHD.......EKAKAVIEIRIGVLESVIQSLKHMKE.................................................................................
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMAL...YAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+......................................................................................................................................................................................................................................................PLATLKPVLAESVATQNVIRRMIGVTTNRKVNASAINSVAEKTKGEGLAGTTAVVARAHLYLLSRNPTDAVAEIDAVLPKVQDEALRRFAIGIRLRSHNELLDMKEASLGVSG..................GATESEVSDLRSKLQ.KDYKELVTSSPGCWLVELAAAEYTLYTG..ASEEAYKSFSSIEKKIQEYIKAPIHVSELVATADNTNEFSLIGFQVRRARPGVKPEGVSASVAEGMANVMADPAAVKALQQAKKAFEEALELVVTLQEANVGHHFHDFFPTTPDHYDKWTSEAARSAQQLIQEALTPHSVGLKPEAIDRIRVSMTNKAFYDSEEKLHALLKSAPKDKSIIASIRETFGPGPSTPISSSDQAVADAVESVHLAVVSSDTAGATDYAKRGKEIAKALAKQLLYRTQVQKCVALTEMNCLQEAVDVVTPVIDANEYIYMWRAFLARSRAYKGLGLITNADKDLKELNRLKHSLTERTPYEKK
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITME..ILKLPGISESAHIFAGV..DVIVPTVHYSMGGVPTLWTGE...VISPRDGDDNAIVPGLL..AAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSH....ALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP.......................................................................................................................................................................................................................................
+s1:
+.............................................................................................................................................................................................MFWLCLVCLSVSHKMIGLCYLLVAILSGFVGYVYSLFIRLELSLIGCGIL....FGDYQFYNVLITSHGLIMVFAFIMPVMMGGLVNYFIPVMAGFPDMVFPRLNNMSFWMYLAGFGCVVNGFLTEEGMGVGWTLYPTLICIDFHSSLACDFVMFAVHLLGISSILNSINLLGTL.....FCCRRKFFSFLSWSLFIWAALITAILLIITLPVLAGGVTLILCDRNFNTSF..Y..DVVGGGDLILFQHIFWFFGHPEVYIILLPVFGLISTIVEVIGFRCVFSTVAMIYSMILIAILGMFVWAHHM.FVVGMDVDSRAYFGGVSILIGLPTCVKLFNWIYSFLYTDMIITFEVYFVIMFIFMFLIGAVTGLFLSNVGIDIMLHDTYFVVGHFHYVLSLGAVVGFFTGFIHFLAKWLPIELYLFWMFYFISTLFIGSNMLFFPMHSLGMYAFPRRISDYPVSFLFWSSFMLYGMLLLASLILFLCALFCVFLFWDYCLFFVSLFVFSLYCFFYFSTWLPCVMVLYLLLVDFAHIVLDYLFLILCFCFVFFIFFWQSLFLFFYI
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTG....GYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYG.PGVLITERDVVS.RAITMEILKLPGISESAHIFAGV.DVIVPTVH.....YSMGGVPTLWTGEVISPRDGDDNAIVPGLLAA...GECACASV.HGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILN...NKGDIPIARIRERMKETMALYAEDSMQTG.KNIIEECYRDFSHALVHD.KSPVWN..SNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP.......................................................................................................................................................................................................................................
+s1:
+................................................................................................................................................................................................................................................................................................................................................................................................................................ASCR...TGRLPMPDDPLFNSTHMHGLRHSSRIAGLGMIAVIWIMYEKLRHSHHYITYKGPENPFARIRHRRFPGGAFMFGWGNNGLNRDCGIKEFECWAGYTGKEYTYV
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMK.....HTLTYLDDANGTVRLAYR..PVHMEMLTNELESIPP.....................
+s1:
+VAKISSIERASTYLRFSTLRVHPHHEPNFRARPVGWKAWNSKQYMDPWAPYPL...TSPVRHVDRPFSGMWFGMGHFALKNFFGPLNWKFWARVSFFGTLGWAYSLSSYALRMHRNGWEWKNRGAVF.......................................................................................................................................................................................................................................................................................................................................................................................................................................
+s2:
+.................................................AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQG...GINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+..................................................................................................KVLIADLPMMWPSDMRRFEKEGGVWGQQFRQRRRQLTFALTISAASTLLGSWYVVMRRRN.TYFVLFSTFSGFSVLGFCIGMSLAPLWYENVANNK......ETSMMRRVWWAKECAKHWD...........................................................................................................................................................................................................................................................................................
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFG..GQSIKQARR..TCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+TPYQDKSYPVQPHNLDELQQPPDSWRKSPIMSKLMDQSLPVYDDVVTGVGRLYWQEPARVWHLFEADDTLMLEEHDREEWNDRPYVAVNHLYEPPIGSEERPIRVEGTGNPGDQQIVLCFGNCAPHVPQSNYYMMMKGYNKTKCPMCQQWFYIHNRPWLVMHPDWT.DEPAAD...EGPAYTFSEIEA...EFDRDFHEFGVYLNAE..........................................................................................................................................................................................................................................................................................................................................................................................
+s2:
+...................................................................................AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKL...YPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGF.IYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+.........................................................................................................................................................................................................................................................AEARAVLQAQSHRTVSAVVPGKMFMRHWIVAEQSTVSVVNRVISGMVAVFTMIWAAGYATLGYNGHNSAHVAGWIFIAYWVVLHTH.IMWLAPTML................................................................................................................................................................
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILK..LPGISESAHIFAGVDVIVPTVHYSMGGVPTLWT.....GEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+..........................................................................................................................................................................................................................................................................PG..QLANYSSPLYMYSHLIKNSTAKTPQLYTA.....KDNSKTAM.HLLTRRGATANYTVNRWYLKEKVDSSNRMRLEGLYECVLCASCTGSCPQYWWNREHFLGPAVLLQSYRWLVEPLDR...............DFDERVRMF.....ETG.TLVNMCHNIFNCSIT...CPKFLNPGLASKEIKRLSSPAAKRVGPAIE.....................................
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVH.........GANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+...............................................................................................................................................................................................................................................................................................................................................EDHRKYKVQREELPRMPHFNDFNDPRFCGTTNKQKNGILAYYQWLHCIGNWGE......EHSMCKKMRWYVERMMHETWLEKWEEKRALGHFDHTILYGVKP.WK.......EFEPLYQPVKKNRKGAYEYWLDRDFEPLYDADAADWREKAPILHDMFVLGKKPVA.
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPEL.RADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQ...TGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVR.MKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+.............................................................................................................................................................................................................................................................................................................................................................WPSKLPLTKNWYYHLS.RRD....SIADETRQYMVVGDFLLLFVVSFSMYRLYVLNRNNTYQTHLSHLI.....NYPPAIIANEFDFKDSNANRLVERKDLDAYREDVVRCRAS.....................................
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGD.IPIARIRERMKETMALYAEDSMQTG.KNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+....................................................................................................................................................................................................................................................................................YGHALELDTHNYKFNGEPPSWMKTHAKTEEETSFAKSVLPHIDFASSYECL.LFDADRLNTN......LNRKEFGNEIKYRLEKQANTVARAQQLLKDKKAGTGPDAAKIENTLIARIFDEEHVQAEMKYVKCIRANELAEDNRLDI...LPGGSPNSLREKTR.WNLN....TELHPADRAEIGARLTAWLPEKYHIVYFDDFQTVA..ANDATARREMLEIVESVQKEYTAEAKEGGYESDLKETVAELMDDVDPTRAITMEAIKSCKDLQQLEDWSRQVHEYNGDDRIIEIYARAAEITKNAEHQALVKQMREWRKLATK
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLW..TGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGR...KQPELRADAGEASIADLDRILNN..KGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP..............................................................................................
+s1:
+.............................................................................................................................................................................................................................................................................................................................................................................................................SLSTILYSPIGTSMMIMLAYNVIVICSKHVNYSLEITAKDYVQDQQLLTIMRYGILSCILLGMEVMFIEIG..................................
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAE..DSM..QTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+............................................................................................................................................................................................................................................PRPFGVWAPATTLAEYRA..........RIP..NPFAYSFKWVYSMKREVFY.....PPEALAHFKDPQQFKDAVDTVIAMRVSD....KIFGEGQKLPRHPVILMLMVLATHGFIIFSGLKYYYGTYMPANNPTWRKTVNKEWEEAINNSPWDHMSHVWQYSDEYAAALGDTAAPGQRKFYIPA...............................................................................
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKE..GRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+........................PATVKRPLWSLLLPQTYTSRIHTLAFHAPSILFMIAVCAIISKQSYYRSSLADEDPKTYDRIDRRAYVALPDGRMALVYPIIDTQTSFTRTVISFLDAVNPF..........................................................................................................................................................................................................................................................................................................................................................................................
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQG.GINAALANC....EEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQ.RAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+.............................................................................................................................................................................................................................................................................................IYTTWGSVPCEDWARNESWLKRITSQSDYRSFEFWHVPQADVPAGLRLNAVERYLLSSLENDTDRLLHVSWCEDFDPYWHDRVGSLEMLYKI....VYTNDYPLYRYIFGNC.MHKVAEKEYMLRKLNYLKSVLFWAGRTERCYTSIVKARYYVQRCVWNALERERYLCACVEAVDSFGKKVPEELRQKVMPELEVALVSMRHWV..WDCPNGKRTFTRRLA..................
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPT.......LWTGEVISPRDGDDNAI..VPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWN..............SNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANG....TVRLAYRPVHMEMLTNELESIPP
+s1:
+.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................SLADKIVRGPPKSVYYTHPRYVMSRDKMLHTIWVDIGIFQTCAYALFPFFSAAYFFK
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP..............................................
+s1:
+................................................................................................................................................................................................................................................................................TYMLAFNSKAKARPNFGLRGV.GYWTSEVYHK.........PGQNYWMVVCCAGPFLLVGAIMMDGFWSKLDDIAGGGPSA..LDYGWRSQDRKPWDFSFDIGEGYAAGPAVYRPASGAVDL............................................................................................................
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACAS...VHGANRL.GANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+................................................................................................................................................................KAVLQLVRFDPETNSSRVESYEYDKHHEYMVLDLLIAVKAHQDPTLAFRSSCCEGVCGS.CAMNINGINSLACITFAQHVTTVAPLPNFPVIKDFVVDLRHFFQQYAYIRPYVRNANLHRSQVDGIVERYNTVARVLSGVSPSEGRAMEKAQEELRETTVAALLRIADAAVDAGNATQALSVLEKVEQQ..GVVLDSTRVTEMIERALKNFAAKS..................................................................................................................................
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGY..GRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVS.RAITMEILKLPGISESAHIFAG.VDVIVP...TVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+................................................................................................................................................................YETFTPKTLSG..RLVMPGNINLLTVSPLYCAVLCIAAATWGVFYWDIYCRKNYE...TVLIARP....KDM..........................................................................................................................................................................................................................................................................
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+MFVRVIFVGVSGVFVFLSLPAICIVYLTFCLCGLFCIMFGSFIFIDYCFICFFACLLFCLVCLLCDLFVDSLRGLFDVCCFIRCIQYCFVWFIISELLLFLSLFYVVFSLVLFVSVEFAFVFVIPVMFSCLICDFGFVFYWYFIDIFNLLINTFLLFVSGLFVNFVLFLFWFRFFLCVLFMLWVGILFGFLFLWNQVWEFALLFVTCSCGVFGSILFLIDLLHFSHVFLGIFLLFLCFSRCFNFLCMDTRFVFLYVVCLYWHFVDCVWFFLLRFVYFDVLSVV......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
+s2:
+...............................................................................................................................................................................................................................................................AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+...............................................MFLGGFVPRRFTQLNRD..PWWMFFIFSVGAWIGEYPAMQIKYNARDLV...LDPHRYVWSHLDDHH................................................................................................................................................................................................................................................................................................................................................................................................
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+............................................................................................................................MGHEETTFSRGNRTRNNALQHIYGLMGLCGVGCVLALFSFVSGQRRIQTTITADGTMTKGTCPT...............................................................................................................................................................................................................................................................................................................................
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGV.......NFYN.EYYCLDLITEDG.CCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+......................................................................................................................................................MAFILSFWMIFLLDSVIVLLSFVCFVCVWICALLFSTVLLVSKLNNIYCTWDFTASKFIDVYWFTIGGMFSLGLLLRLCLLLYFGHLNFVSFDLCKVVGFQWYWVYFIFGETTIFSNLILESDYMIGDLRLLQCNHVLTLLSLVIYKLWLSAVDVIHSFAISSLGVKVDCIPGRCNEIVLFSSNNATVYGQCSELCGVLHGFMPIVICFI................................................................................................................................................................
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLIT..EDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTT...SAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGI.....YGPGVLITERDVVSRAITME..ILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWT....GEVISPRDGDDNAIV....PGLLAAGECA..CASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+......................................................................................................................................................................YTRWKCDR......IPVLQLKLFTQEYNIMALVGLLSMVFLFKHASYCSEETERKNGWWAGYP........YWRDPIARRNEIRYKQLINSNDVDITDPKWTGCSKEQ.................................................................................................................................................................................................................................
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVA.RAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+................................................................................................................................................................................................................................................................................TYMLAFNSKAKARPNFGLRGV.GYWTSEVYH.KPGQNYWMV..VCCAGPFL...LVGAIMMDGFWSKLDDIAGGGPSA..LDYGWRSQDRKPWDFSFDIGEGYAAGPAVYRPASGAVDL............................................................................................................
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRL.GANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+..............................................................................................................................................................................................................................................................................................................................TMNFGNMTLGGAMATFGGQSNPMCNYTSPLAKKFVYK..EVGKVHYPLRRHVFRTKVRTAAEIRFN......EIVKRYMKEKMTFKRGCYAATITNTVE.........LDHMGS.IIPKDEYEVKRLTSYMTSKKMS.SDYKKHMQELWTRVLFVCESTNLVGVTENAMHQNSRPGTDEEFMSIIWYSSFVTTLMAFVVTLFIWWYRYGQAPQYAEF
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLT...YLDDANGTVRLAYRPVHMEMLTNELESIPP..................................
+s1:
+....................................................................................................................................................................................................................................................................................YGHALELDTHNYKFNGEPPSWMKTHAKTEEETSFAKSVLPHIDFASSYECLLF.DADRLNTN......LNRKEFGNEIKYRLEKQANTVARAQQLLKDKKAGTGPDAAKIENTLIARIFDEEHVQAEMKYVKCIRANELAEDNRLDILPGGSPNSLREKTRWNLNTELHPADRAEIGARLTAWLPEKYHIVYFDDFQTVAANDATARREMLEIVESVQKEYTAEAKEGGYESDLKETVAELMDDVDPTRAITMEAIKSCKDLQQLEDWSRQVHEYNGDDRIIEIYARAAEITKNAEHQALVKQMREWRKLATK
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLW..TGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGR...KQPELRADAGEASIADLDRILNN..KGDIPIARIRERMKETMAL....YAEDS....MQTG.KNIIEECYRDFSHALVH..DKSPV......WNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRL.AYRPVHMEMLTNELESIPP..................................................................
+s1:
+......................................................................................................................................................................................................................................................................................................................................................FFGKGWDNAALDTIFSSMLRKPEVNDRIRTQYASTMD...PRDADVLRRLGEVSKENKTFIRVFLPPHL.GDPHRLLKCYSLMAYPILDDKGGQLKVEM.DGCKL.DAFADPDDDYSKVVIPHIELVEYLAKSLLETMKWEATPRGAASLLESLYRGAEIPDHVFQTPAVIERLEDYKDGNKVIS
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDI..PIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDAN.GTVRLAYRPVHMEMLTNEL...ESIPP.......................
+s1:
+.....................................................................................LHFPLSPPPIEIDYLDSDPLEFAVRTEARRWGFDDLQYMRELAFVRIKENPSIGDFRRMTPEERRDLFWGSD....RQDFFRYITLKLTGHPEHLYHRGW..................................................................................................................................................................................................................................................................................................................................
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPF.LRTK......DGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLI..TEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+TPYQDKSYPVQPHNLDELQQPPDSWRKSPIMSKLMDQSLPVYDDVVTGVGRLYWQEPARVWHLFEADDTLMLEEHDREEWNDRPYVAVNHLYE.PPIGSEERPIRVE.GTGNPGDQQIVLCFGNCAPHVPQSNYYMMMKGYNKTKCPMCQQWFYIHNRPWLVMHPDWT.DEPA....ADEGPAYT..FSEIEAEFDRDFHEFGVYLNAE..........................................................................................................................................................................................................................................................................................................................................................................................
+s2:
+...................................................................................AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYD..VACISKL...YPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGF.IYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+.............................................................................................................................................................................................MFWLCLVCLSVSHKMIGLCYLLVAILSGFVGYVYSLFIRLELSLIGCGIL....FGDYQFYNVLITSHGLIMVFAFIMPVMMGGLVNYFIPVMAGFPDMVFPRLNNMSFWMYLAGFGCVVNGFLTEEGMGVGWTLYPTLICIDFHSSLACDFVMFAVHLLGISSILNSINLLGTLFCC.....RRKFFSFLSWSLFIWAALITAILLIITLPVLAGGVTLILCDRNFNTSF..Y..DVVGGGDLILFQHIFWFFGHPEVYIILLPVFGLISTIVEVIGFRCVFSTVAMIYSMILIAILGMFVWAHHM.FVVGMDVDSRAYFGGVSILIGLPTCVKLFNWIYSFLYTDMIITFEVYFVIMFIFMFLIGAVTGLFLSNVGIDIMLHDTYFVVGHFHYVLSLGAVVGFFTGFIHFLAKWLPIELYLFWMFYFISTLFIGSNMLFFPMHSLGMYAFPRRISDYPVSFLFWSSFMLYGMLLLASLILFLCALFCVFLFWDYCLFFVSLFVFSLYCFFYFSTWLPCVMVLYLLLVDFAHIVLDYLFLILCFCFVFFIFFWQSLFLFFYI
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTG....GYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYG.PGVLITERDVVS.RAITMEILKLPGISESAHIFAGV.DVIVPTVH.....YSMGGVPTLWTGEVISPRDGDDNAIVPGLLAA...GECACASV.HGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNN...KGDIPIARIRERMKETMALYAEDSMQTG.KNIIEECYRDFSHALVHD.KSPVWN..SNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP.......................................................................................................................................................................................................................................
+s1:
+MFVRVIFVGVSGVFVFLSLPAICIVYLTFCLCGLFCIMFGSFIFIDYCFICFFACLLFCLVCLLCDLFVDSLRGLFDVCCFIRCIQYCFVWFIISELLLFLSLFYVVFSLVLFVSVEFAFVFVIPVMFSCLICDFGFVFYWYFIDIFNLLINTFLLFVSGLFVNFVLFLFWFRFFLCVLFMLWVGILFGFLFLWNQVWEFALLFVTCSCGVFGSILFLIDLLHFSHVFLGIFLLFLCFSRCFNFLCMDTRFVFLYVVCLYWHFVDCVWFFLLRFVYFDVLSVV......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
+s2:
+...............................................................................................................................................................................................................................................................AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+VAKISSIERASTYLRFSTLRVHPHHEPNFRARPVGWKAWNSKQYMDPWAPYPL...TSPVRHVDRPFSGMWFGMGHFALKNFFGPLNWKFWARVSFFGTLGWAYSLSSYALRMHRNGWEWKNRGAVF.......................................................................................................................................................................................................................................................................................................................................................................................................................................
+s2:
+.................................................AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQG...GINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+...........................................................................................................................DMHSSDRFKAAWDE...IPLHMLGASHKQMFEWYWRAMYQLGL..RDPYRLTKLRSMLNWAALFSFMYLTYISIFYSSFYHVYMMDWPEHFKRENAREYALSHGHDVWAGDGKFIRPYFH...INPPMLTMTSEDI....................................................................................................................................................................................................................................................
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFK.SKYTILCTGGYGRVYFTTTSA..KSCTGDGTAMVARAGLPAEDMEFVQ..FHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+......................................................................................................................................................MAFILSFWMIFLLDSVIVLLSFVCFVCVWICALLFSTVLLVSKLNNIYCTWDFTASKFIDVYWFTIGGMFSLGLLLRLCLLLYFGHLNFVSFDLCKVVGFQWYWVYFIFGETTIFSNLILESDYMIGDLRLLQCNHVLTLLSLVIYKLWLSAVDVIHSFAISSLGVKVDCIPGRCNEIVLFSSNNATVYGQCSELCGVLHGFMPIVICFI................................................................................................................................................................
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLIT..EDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTT...SAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGI.....YGPGVLITERDVVSRAITME..ILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWT....GEVISPRDGDDNAIV....PGLLAAGECA..CASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+..........................................................................................................................................................................................SRVSNKISGGMACQTVVNHGYYLKPMTGNPYLCTQHDGVTTAYQQGFAPKDFNWLYRFRYNLLPQGMSGGFFSRNPYGRYVHWLEVSTIEKMRLQMFTMESVPCSVVSLILLVFTMWHSYRLAFLHPDITLYNLGLWSTKPWVQQQRFNKKKELDQDVYRWMTRVPEV..........MMDDPIREMYKMGIT.ANDPVYAMAKEQGVEHELTMTHAEYTSTSPDIRRVIANARK...............................................................................................................
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYT..ILCTGGYGRVYF...TTTSAKSCT.GDGTAMVARAGLPAEDMEFV.QFH....PTGI.........YGPGVLITERDVVS....RAITMEILKLPGISESAHIFA.....GVDVIVPTVH.YSMGGVPTL.WTGEV.ISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGE..ASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+...........................................................................................................................................................................................................................................................................................................................TYFYANCGETGISGATMQVLLKLTLACCVVQVFAIRYFVFQRLTTKKQFVEDSTDLWESDGTEMD......GEEAVANLRIQHERIMPFMNDIKDKLDAQ......................................................................................
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGAN.RLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALY..AEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+................................................................................................YTELSHMKFPVYYGAVGVVLGYFVVMWVVFLRMGSKHTARSEFKNDYLRVWRRRLGTGYEWADAWGPEMGT..FFKDLPEE.........................................................................................................................................................................................................................................................................................................................................
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFI..YQRAFGGQSIKQARRTCAASD......RTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+EDHRKYKVQREELPRMPHFNDFNDPRFCGTTNKQKNGILAYYQWLHCIGNW..GEEHSMCKKMRWYVERMMHETWLEKWEEKRALGHFDHT.....ILYGVK..PW..KEFEPLYQPVKKNRKG.AYEYWLD.RDFEPLYDADAADWREKAPILHDMFVLGKKPVA.......................................................................................................................................................................................................................................................................................................................................................
+s2:
+...........AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+................................................................................................................................................................................................................................................................................................................................................................................................................................ASCR...TGRLPMPDDPLFNSTHMHGLRHSSRIAGLGMIAVIWIMYEKLRHSHHYITYKGPENPFARIRHRRFPGGAFMFGWGNNGLNRDCGIKEFECWAGYTGKEYTYV
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMK.....HTLTYLDDANGTVRLAYR..PVHMEMLTNELESIPP.....................
+s1:
+............................................................................................................................................................................................................................................PRPFGVWAPATTLAEYRAR..........IP..NPFAYSFKWVYSMKREVFY.....PPEALAHFKDPQQFKDAVDTVIAMRVSD....KIFGEGQKLPRHPVILMLMVLATHGFIIFSGLKYYYGTYMPANNPTWRKTVNKEWEEAINNSPWDHMSHVWQYSDEYAAALGDTAAPGQRKFYIPA...............................................................................
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKE..GRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP
+s1:
+........................................................................................................................................................................................................................................................MLRRHAYKTAACVTAIQ...VARAVHSIAVLQNSTPATTAQKLGSVVSKEEVAAVNKVPASLLEKVCNPRLVAFTAMDLARTRFAPLIAT..ITD.EVDYTSIEQQVAKRFSKDPSKLQPTPGALKHFRENNWKDMKSLITFYEETMYPIRMKHKEYKYHELTSFHIKDVLKRGLSAFKQSYLDEQREEQTKVKAYMKSCDDFVRTAVKDAFDTSVCNDIANILRIGGETHAHAHRMALKILDDMNL.MRVPYSAATTEILQAVAFNDGPFDNSPLLFEMIEYPERGEVHVGTASLENISDEVLKLISNRHQTPLDDGVLIRSPDTHPNLQRSPE
+s2:
+AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITERDVVSRAITMEILKLPGISESAHIFAGVDVIVP.TVHYSMGGVPTLWTGEVIS..PRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRK.QPELRA..DAGEASIADLDRILNNKGD....IPIARIRERMKETMALYAEDSMQTGKNIIEECYRDFSH.ALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRM.........KHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP.................................................................
+s1:
+MLRRTFTRLALSRAYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSIHYGGKQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITEGARGEGGYLVNSEGERFMERYAPKAKDLASRDVVSRAITMEILAGRGCGPKKDHVMLQLHHLDPATLHKKLPGISESAHIFAGVDVTKEPIPIVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYAAVFRTEDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVRKESRGAHARDDYQERDDHNWMKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPPAKRVY
+s2:
+.............AYPVIDHTYDCVVVGAGGSGLRAAMGVAASGYDVACISKLYPSRSHTIAAQGGINAALANCEEDDWRWHVYDTVKGSDWLGDQDAIQYMCQEAPCVVSELESMGLPFLRTKDGFIYQRAFGGQSI....KQARRTCAASDRTGHAMLHTLYGQSFQYGVNFYNEYYCLDLITEDGCCRGVMAMSIDDGTIHRFKSKYTILCTGGYGRVYFTTTSAKSCTGDGTAMVARAGLPAEDMEFVQFHPTGIYGPGVLITE..............................RDVVSRAITMEIL..........................KLPGISESAHIFAGVDV......IVPTVHYSMGGVPTLWTGEVISPRDGDDNAIVPGLLAAGECACASVHGANRLGANSLLDIVVFGKSCANTVIFNLTKEGRKQPELRADAGEASIADLDRILNNKGDIPIARIRERMKETMALYA.....EDSMQTGKNIIEECYRDFSHALVHDKSPVWNSNLIEALELRNLLTNAMMTISGAVVR....................MKHTLTYLDDANGTVRLAYRPVHMEMLTNELESIPP.....
+"Adjust for PAE" is checked in the distance restraint options, but the
+reference model has no PAE matrix assigned. This option has been ignored.
+> isolde restrain distances "#1.2/K5" templateAtoms "#9/K5" perChain false
+> adjustForConfidence false useCoordinateAlignment true kappa 4.40 fallOff
+> 2.50 groupName "Reference Distance Restraints"
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+[Repeated 1 time(s)]Computing secondary structure
+RMSD between 470 pruned atom pairs is 1.746 angstroms; (across all 498 pairs:
+.464)
+RMSD between 5 pruned atom pairs is 2.947 angstroms; (across all 28 pairs:
+.607)
+RMSD between 4 pruned atom pairs is 3.343 angstroms; (across all 23 pairs:
+.086)
+RMSD between 3 pruned atom pairs is 3.217 angstroms; (across all 19 pairs:
+.885)
+RMSD between 3 pruned atom pairs is 2.636 angstroms; (across all 16 pairs:
+.665)
+> isolde restrain torsions #1.2/K5 templateResidues #9/K5 adjustForConfidence
+> false sidechains true springConstant 250.00 alpha 0.20
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+[Repeated 1 time(s)]Computing secondary structure
+> isolde sim start #1.2/K5
+Loading residue template for FAD from internal database
+Sim termination reason: None
+ISOLDE: stopped sim
+Loading residue template for 3PE from internal database
+Loading residue template for ATP from internal database
+Loading residue template for LPP from internal database
+Loading residue template for PC1 from internal database
+Chain HM, residue 1 specifies more than one residue! The simulation can still
+run, but this will probably cause problems later if not rectified by
+renumbering.
+> show #!9 models
+> hide #!1 models
+> select #19
+Nothing selected
+> select #9
+atoms, 7592 bonds, 6 pseudobonds, 498 residues, 2 models selected
+> select #9&ligand
+Nothing selected
+> hide #!9 models
+> show #!1 models
+Deleted the following atoms from residue FAD FD1: HN
+> select #1/K5
+atoms, 9120 bonds, 594 residues, 1 model selected
+> select #1/K5
+atoms, 9120 bonds, 594 residues, 1 model selected
+> isolde ignore ~#1/K5
+ISOLDE: currently ignoring 498 residues in model 9
+ISOLDE: currently ignoring 157 residues in model 6
+ISOLDE: currently ignoring 246 residues in model 7
+ISOLDE: currently ignoring 16261 residues in model 1.2
+ISOLDE: currently ignoring 3296 residues in model 3
+ISOLDE: currently ignoring 594 residues in model 8
+> isolde ~ignore
+> isolde ignore ~#1/K5&#1
+ISOLDE: currently ignoring 16261 residues in model 1.2
+> select #1/K5
+atoms, 9120 bonds, 594 residues, 1 model selected
+> select ~#1/K5&#1
+atoms, 270543 bonds, 35 pseudobonds, 16261 residues, 23 models selected
+> hide sel atoms
+> hide sel cartoons
+> select #1/K5
+atoms, 9120 bonds, 594 residues, 1 model selected
+> isolde sim start #1.2/K5
+ISOLDE: started sim
+> show #!9 models
+> hide sel atoms
+> show sel cartoons
+> ui mousemode right "isolde tug residue"
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 10 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> save /Users/rafaelrocha/supercomplex/supercomplexV-
+> IV2-II/cryosparc_P43_J450_008_volume_map_sharp_NOSEQ/superComplexConsolidation/superComplexConsolidatedV8.cxs
+> isolde sim start #1.2/K5
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: stopped sim
+> isolde ~ignore
+[Repeated 1 time(s)]
+> select #1
+atoms, 279663 bonds, 35 pseudobonds, 16855 residues, 23 models selected
+> show sel cartoons
+> select #1/K5
+atoms, 9120 bonds, 594 residues, 1 model selected
+> isolde sim start #1.2/K5
+ISOLDE: started sim
+> select #1
+atoms, 279663 bonds, 35 pseudobonds, 16855 residues, 23 models selected
+> show sel atoms
+> select #1/K5
+atoms, 9120 bonds, 594 residues, 1 model selected
+> close #1.2.9
+> close #1.2.7
+> ui tool show "Ramachandran Plot"
+> isolde pepflip #1.2/K5:553
+> isolde pepflip #1.2/K5:377
+Unable to flip peptide bond after 50 rounds. Giving up.
+> isolde pepflip #1.2/K5:446
+> isolde pepflip #1.2/K5:93
+> isolde pepflip #1.2/NF:86
+> isolde pepflip #1.2/K5:240
+Tugging of non-polar hydrogens is not enabled. Applying tug to the nearest
+bonded heavy atom.
+> isolde pepflip #1.2/K5:240
+> isolde pepflip #1.2/K5:241
+> isolde pepflip #1.2/K5:240
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 5 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> isolde sim start #1.2/K5:240
+ISOLDE: started sim
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 2 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> select #1/K5
+atoms, 9120 bonds, 594 residues, 1 model selected
+> isolde sim start #1.2/K5
+ISOLDE: started sim
+> select clear
+[Repeated 1 time(s)]
+> isolde pepflip #1.2/K5:579
+[Repeated 2 time(s)]
+> isolde pepflip #1.2/K5:580
+> select #1
+atoms, 279663 bonds, 35 pseudobonds, 16855 residues, 23 models selected
+> show sel atoms
+> isolde pepflip #1.2/K5:552
+> isolde pepflip #1.2/K5:550
+[Repeated 1 time(s)]
+> select clear
+> isolde pepflip #1.2/K5:551
+> isolde pepflip #1.2/K5:552
+> isolde pepflip #1.2/K5:235
+> isolde pepflip #1.2/K5:451
+> isolde pepflip #1.2/K5:23
+> isolde pepflip #1.2/K5:285
+[Repeated 1 time(s)]
+> isolde pepflip #1.2/K5:23
+[Repeated 1 time(s)]
+> isolde pepflip #1.2/K5:24
+> isolde pepflip #1.2/K5:22
+> isolde pepflip #1.2/K5:21
+> isolde pepflip #1.2/K5:20
+> isolde pepflip #1.2/K5:462
+> isolde pepflip #1.2/K5:239
+[Repeated 1 time(s)]
+Tugging of non-polar hydrogens is not enabled. Applying tug to the nearest
+bonded heavy atom.
+> isolde pepflip #1.2/K5:265
+[Repeated 1 time(s)]
+> isolde pepflip #1.2/K5:264
+Tugging of non-polar hydrogens is not enabled. Applying tug to the nearest
+bonded heavy atom.
+> isolde pepflip #1.2/K5:462
+> isolde pepflip #1.2/Mg:238
+> isolde cisflip #1.2/K5:256
+> isolde pepflip #1.2/K5:249
+[Repeated 2 time(s)]
+Tugging of non-polar hydrogens is not enabled. Applying tug to the nearest
+bonded heavy atom.
+> isolde pepflip #1.2/K5:233
+Tugging of non-polar hydrogens is not enabled. Applying tug to the nearest
+bonded heavy atom.
+> isolde pepflip #1.2/K5:31
+> isolde pepflip #1.2/K5:32
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 24 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> save /Users/rafaelrocha/supercomplex/supercomplexV-
+> IV2-II/cryosparc_P43_J450_008_volume_map_sharp_NOSEQ/superComplexConsolidation/superComplexConsolidatedV8.cxs
+Taking snapshot of stepper: combination
+> select #1/K5
+atoms, 9120 bonds, 594 residues, 1 model selected
+> isolde sim start #1.2/K5
+ISOLDE: started sim
+> isolde pepflip #1.2/K5:32
+> select #1/K5
+atoms, 9120 bonds, 594 residues, 1 model selected
+> ui tool show "Ramachandran Plot"
+> isolde pepflip #1.2/K5:405
+> isolde pepflip #1.2/K5:404
+> isolde pepflip #1.2/K5:230
+> isolde pepflip #1.2/K5:563
+> isolde pepflip #1.2/K5:92
+> isolde pepflip #1.2/K5:370
+> show sel atoms
+> isolde pepflip #1.2/K5:47
+[Repeated 1 time(s)]
+> isolde pepflip #1.2/K5:48
+> isolde sim stop
+Sim termination reason: None
+ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
+chains...
+ISOLDE: Corrected atom nomenclature of 14 residues in model #1.2 to IUPAC-IUB
+standards.
+ISOLDE: stopped sim
+> hide #!9 models
+> select clear
+> save /Users/rafaelrocha/supercomplex/supercomplexV-
+> IV2-II/cryosparc_P43_J450_008_volume_map_sharp_NOSEQ/superComplexConsolidation/superComplexConsolidatedV8.cxs
+Taking snapshot of stepper: combination
+——— End of log from Thu Mar 6 15:08:05 2025 ———
+opened ChimeraX session
+> show #!2 models
+> hide #!2 models
+> show #3 models
+> hide #3 models
+> show #!4 models
+> hide #!4 models
+> show #!6 models
+> hide #!6 models
+> show #!7 models
+> show #8 models
+> show #!9 models
+> hide #!9 models
+> show #!9 models
+> show #!2 models
+> show #3 models
+[deleted to fit within ticket limits]
 > volume #2 level 0.192